F359392

General Info

Members Datasets Scaffolds Average Seq Length
247 149 494 355

Family's Representative Sequence

Representative Sequence 3300049584|Ga0501068_0035981|Ga0501068_0035981_1105_2280
Length 391
Sequence MHLSQLRNVKTRSDNQGDKALNSNENYSESNTAHAQLEAFGWNSFFEACFQSYDEPDICPARVAVEHGQTYRLYSEYGELAGEVSGRLRHQSMSRDDMPAVGDWVVIRPRLEEGRATIHHILPRRSRFVRKVAGSRSDEQIVGANIDTVFVVMSLNNDFNIRRLERYLAATWDSGASPVILLSKADLCDDVEAKLYEVEQVALGVPVHAISIMHSASLDVLIQYFSFGKTVAMLGSSGVGKSTLINLLAGNYIQRVRDIRTSDDRGRHTTTHRELILLPEGGLVLDTPGMRELQFWDVSAGLRETFDDIESLAAECNFGDCSHGSEPHCAVRDAIRRGKLDAARFESYKKLQKENDFLELRRSVGAKAAEKSRWKKVMGSKRQKKKIKGGF

Samples

Sample ID Description Type Environment
1 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
97 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
98 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
99 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
100 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
113 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
114 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300038698 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot15 Metagenome Rhizosphere
117 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
118 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
119 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
120 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
121 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
130 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
131 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
132 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
133 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
134 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
135 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
136 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
137 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
138 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
139 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
140 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
141 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
142 3300049689 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_A_4_drought Metagenome Rhizosphere
143 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
144 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
145 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
146 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
149 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.6
Metatranscriptomes 0
Isolates 0.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.43
Rhizosphere 97.17
Stem 0
Stem Tuber 0
Unclassified 17.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501068_0035981 3300049584 Unclassified 2958
2 SwRhRL2b_contig_2270254 2162886007 Bacteria 3149
3 SwRhRL2b_contig_3425394 2162886007 Bacteria 2420
4 JGI24751J29686_10000116 3300002459 Bacteria 42171
5 Ga0065704_10087485 3300005289 Bacteria 3022
6 Ga0065712_10001471 3300005290 Bacteria 8107
7 Ga0065712_10068286 3300005290 Bacteria 12180
8 Ga0065715_10041129 3300005293 Bacteria 1439
9 Ga0065715_10093986 3300005293 Unclassified 4461
10 Ga0065715_10097881 3300005293 Unclassified 3571
11 Ga0065707_10008796 3300005295 Unclassified 3929
12 Ga0070690_100002019 3300005330 Bacteria 10819
13 Ga0070670_100001388 3300005331 Bacteria 19425
14 Ga0070670_100189097 3300005331 Bacteria 1788
15 Ga0070682_100008098 3300005337 Bacteria 5923
16 Ga0068868_100114434 3300005338 Unclassified 2195
17 Ga0070689_100013747 3300005340 Bacteria 5864
18 Ga0070692_10031284 3300005345 Bacteria 2667
19 Ga0070692_10093764 3300005345 Unclassified 1635
20 Ga0070669_100003460 3300005353 Bacteria 11382
21 Ga0070669_100018939 3300005353 Unclassified 4920
22 Ga0070669_100122594 3300005353 Unclassified 1985
23 Ga0070675_100014490 3300005354 Bacteria 6218
24 Ga0070675_100056719 3300005354 Bacteria 3229
25 Ga0070671_100108843 3300005355 Bacteria 2327
26 Ga0070673_100206084 3300005364 Unclassified 1696
27 Ga0070705_100117108 3300005440 Bacteria 1713
28 Ga0070700_100000061 3300005441 Bacteria 80618
29 Ga0070700_100046339 3300005441 Bacteria 2686
30 Ga0070694_100030085 3300005444 Bacteria 3550
31 Ga0070694_100031796 3300005444 Bacteria 3462
32 Ga0070694_100072816 3300005444 Unclassified 2371
33 Ga0070708_100278835 3300005445 Bacteria 1573
34 Ga0070678_100294442 3300005456 Bacteria 1377
35 Ga0070662_100046822 3300005457 Bacteria 3108
36 Ga0070681_10084921 3300005458 Bacteria 3118
37 Ga0070707_100000289 3300005468 Bacteria 49474
38 Ga0070707_100050355 3300005468 Bacteria 3992
39 Ga0070698_100032248 3300005471 Bacteria 5427
40 Ga0070699_100000582 3300005518 Bacteria 34521
41 Ga0070699_100106680 3300005518 Bacteria 2457
42 Ga0070679_100078836 3300005530 Unclassified 3283
43 Ga0070679_100090548 3300005530 Bacteria 3047
44 Ga0068853_100066681 3300005539 Bacteria 3126
45 Ga0070686_100005456 3300005544 Bacteria 7043
46 Ga0070695_100013925 3300005545 Bacteria 4841
47 Ga0070695_100019485 3300005545 Bacteria 4131
48 Ga0070696_100005510 3300005546 Bacteria 8444
49 Ga0070696_100012623 3300005546 Bacteria 5672
50 Ga0070696_100050364 3300005546 Bacteria 2895
51 Ga0070693_100096743 3300005547 Unclassified 1790
52 Ga0070704_100041132 3300005549 Bacteria 3188
53 Ga0070704_100050474 3300005549 Unclassified 2924
54 Ga0070704_100279667 3300005549 Bacteria 1382
55 Ga0068857_100063704 3300005577 Bacteria 3278
56 Ga0068857_100167450 3300005577 Bacteria 1996
57 Ga0068859_100001995 3300005617 Bacteria 20839
58 Ga0068859_100004941 3300005617 Bacteria 13544
59 Ga0068859_100041609 3300005617 Bacteria 4615
60 Ga0068859_100051598 3300005617 Unclassified 4135
61 Ga0068859_100136860 3300005617 Bacteria 2522
62 Ga0068859_100190279 3300005617 Bacteria 2136
63 Ga0068859_100487062 3300005617 Unclassified 1329
64 Ga0068864_100019001 3300005618 Bacteria 5745
65 Ga0068864_100054483 3300005618 Bacteria 3452
66 Ga0068864_100066239 3300005618 Bacteria 3135
67 Ga0068864_100103693 3300005618 Bacteria 2525
68 Ga0068864_100181648 3300005618 Bacteria 1924
69 Ga0068861_100395795 3300005719 Bacteria 1225
70 Ga0068870_10031746 3300005840 Bacteria 2678
71 Ga0068863_100038488 3300005841 Bacteria 4550
72 Ga0068863_100115939 3300005841 Bacteria 2553
73 Ga0068858_100030877 3300005842 Bacteria 4976
74 Ga0068858_100142231 3300005842 Unclassified 2253
75 Ga0068858_100143113 3300005842 Bacteria 2245
76 Ga0068858_100250360 3300005842 Bacteria 1683
77 Ga0068860_100023000 3300005843 Bacteria 6027
78 Ga0068860_100033732 3300005843 Bacteria 4911
79 Ga0068860_100060981 3300005843 Bacteria 3583
80 Ga0068860_100063377 3300005843 Bacteria 3512
81 Ga0068860_100172823 3300005843 Bacteria 2087
82 Ga0068860_100227811 3300005843 Bacteria 1811
83 Ga0097621_100100931 3300006237 Unclassified 2428
84 Ga0068871_100004678 3300006358 Bacteria 9569
85 Ga0068871_100133206 3300006358 Bacteria 2109
86 Ga0075428_100020503 3300006844 Bacteria 7319
87 Ga0075433_10015162 3300006852 Bacteria 6314
88 Ga0075433_10456108 3300006852 Bacteria 1127
89 Ga0075434_100081044 3300006871 Unclassified 3242
90 Ga0075429_100036211 3300006880 Bacteria 4292
91 Ga0068865_100086434 3300006881 Bacteria 2264
92 Ga0097620_100001995 3300006931 Bacteria 20839
93 Ga0097620_100004941 3300006931 Bacteria 13544
94 Ga0097620_100041606 3300006931 Bacteria 4615
95 Ga0097620_100051598 3300006931 Unclassified 4135
96 Ga0097620_100136856 3300006931 Bacteria 2522
97 Ga0097620_100190285 3300006931 Bacteria 2136
98 Ga0097620_100487040 3300006931 Unclassified 1329
99 Ga0105240_10670534 3300009093 Bacteria 1135
100 Ga0111539_10005314 3300009094 Bacteria 16666
101 Ga0111539_10031753 3300009094 Bacteria 6416
102 Ga0111539_10387891 3300009094 Unclassified 1626
103 Ga0105247_10000155 3300009101 Bacteria 67215
104 Ga0114129_10235367 3300009147 Bacteria 2464
105 Ga0105243_10002177 3300009148 Bacteria 16540
106 Ga0105243_10051811 3300009148 Bacteria 3248
107 Ga0105243_10083500 3300009148 Bacteria 2613
108 Ga0105243_10344474 3300009148 Unclassified 1366
109 Ga0105241_10220173 3300009174 Bacteria 1595
110 Ga0105242_10006371 3300009176 Bacteria 9084
111 Ga0105248_10008147 3300009177 Bacteria 11507
112 Ga0105248_10009218 3300009177 Bacteria 10856
113 Ga0105248_10043897 3300009177 Bacteria 5014
114 Ga0105248_10120247 3300009177 Bacteria 2963
115 Ga0105248_10495307 3300009177 Unclassified 1378
116 Ga0105248_10550366 3300009177 Bacteria 1302
117 Ga0105237_10390919 3300009545 Bacteria 1395
118 Ga0105238_10004871 3300009551 Bacteria 13280
119 Ga0105238_10005639 3300009551 Bacteria 12373
120 Ga0105249_10006188 3300009553 Bacteria 10388
121 Ga0105249_10084098 3300009553 Bacteria 2963
122 Ga0105246_10133965 3300011119 Bacteria 1854
123 Ga0157373_10066205 3300013100 Bacteria 2556
124 Ga0157373_10079217 3300013100 Unclassified 2317
125 Ga0157378_10112021 3300013297 Unclassified 2502
126 Ga0163162_10087480 3300013306 Unclassified 3194
127 Ga0163163_10000382 3300014325 Bacteria 42215
128 Ga0163163_10086705 3300014325 Bacteria 3140
129 Ga0157380_10123808 3300014326 Bacteria 2194
130 Ga0157380_10145002 3300014326 Bacteria 2045
131 Ga0157380_10413695 3300014326 Bacteria 1283
132 Ga0157377_10068972 3300014745 Bacteria 2039
133 Ga0157379_10039673 3300014968 Bacteria 4202
134 Ga0207710_10000515 3300025900 Bacteria 23878
135 Ga0207647_10078051 3300025904 Unclassified 1989
136 Ga0207647_10104015 3300025904 Bacteria 1683
137 Ga0207643_10020796 3300025908 Bacteria 3603
138 Ga0207643_10057440 3300025908 Bacteria 2215
139 Ga0207707_10111578 3300025912 Bacteria 2391
140 Ga0207707_10121530 3300025912 Bacteria 2283
141 Ga0207662_10001148 3300025918 Bacteria 12523
142 Ga0207662_10167284 3300025918 Bacteria 1408
143 Ga0207652_10102844 3300025921 Bacteria 2525
144 Ga0207652_10148541 3300025921 Unclassified 2098
145 Ga0207646_10000140 3300025922 Bacteria 98858
146 Ga0207681_10007884 3300025923 Bacteria 6512
147 Ga0207681_10121995 3300025923 Bacteria 1913
148 Ga0207694_10003019 3300025924 Bacteria 13492
149 Ga0207694_10032697 3300025924 Bacteria 3983
150 Ga0207650_10000374 3300025925 Bacteria 42233
151 Ga0207650_10086420 3300025925 Bacteria 2387
152 Ga0207709_10002737 3300025935 Bacteria 10874
153 Ga0207709_10041589 3300025935 Bacteria 2759
154 Ga0207670_10002681 3300025936 Bacteria 9356
155 Ga0207670_10163515 3300025936 Bacteria 1663
156 Ga0207704_10046680 3300025938 Bacteria 2584
157 Ga0207711_10002408 3300025941 Bacteria 16707
158 Ga0207711_10005365 3300025941 Bacteria 10854
159 Ga0207711_10035923 3300025941 Bacteria 4202
160 Ga0207689_10313283 3300025942 Bacteria 1302
161 Ga0207651_10164423 3300025960 Bacteria 1743
162 Ga0207651_10222061 3300025960 Unclassified 1528
163 Ga0207712_10018635 3300025961 Bacteria 4524
164 Ga0207703_10078907 3300026035 Unclassified 2737
165 Ga0207703_10113683 3300026035 Unclassified 2314
166 Ga0207708_10000073 3300026075 Bacteria 80597
167 Ga0207708_10002295 3300026075 Bacteria 14061
168 Ga0207708_10010714 3300026075 Bacteria 6813
169 Ga0207708_10024811 3300026075 Unclassified 4536
170 Ga0207641_10065219 3300026088 Bacteria 3115
171 Ga0207641_10116621 3300026088 Bacteria 2376
172 Ga0207676_10041019 3300026095 Bacteria 3550
173 Ga0207676_10168251 3300026095 Bacteria 1907
174 Ga0207676_10200841 3300026095 Bacteria 1761
175 Ga0207674_10004953 3300026116 Bacteria 15911
176 Ga0207674_10076914 3300026116 Bacteria 3344
177 Ga0207675_100082791 3300026118 Unclassified 3010
178 Ga0207675_100480470 3300026118 Bacteria 1235
179 Ga0207428_10004003 3300027907 Bacteria 14145
180 Ga0207428_10017065 3300027907 Bacteria 6237
181 Ga0207428_10106650 3300027907 Unclassified 2160
182 Ga0268265_10266897 3300028380 Bacteria 1525
183 Ga0268264_10058889 3300028381 Unclassified 3218
184 Ga0268264_10147975 3300028381 Bacteria 2102
185 Ga0265318_10000836 3300028577 Bacteria 20270
186 Ga0265330_10017994 3300031235 Bacteria 3248
187 Ga0265332_10004360 3300031238 Bacteria 6658
188 Ga0265320_10005548 3300031240 Bacteria 8085
189 Ga0265329_10023548 3300031242 Unclassified 2050
190 Ga0265339_10031497 3300031249 Bacteria 2996
191 Ga0265331_10000601 3300031250 Bacteria 31901
192 Ga0265316_10002219 3300031344 Bacteria 20378
193 Ga0307408_100016327 3300031548 Bacteria 4953
194 Ga0265314_10017559 3300031711 Bacteria 5612
195 Ga0265342_10015338 3300031712 Bacteria 5043
196 Ga0307406_10008877 3300031901 Bacteria 5618
197 Ga0307412_10008162 3300031911 Bacteria 5967
198 Ga0307416_100017971 3300032002 Bacteria 4966
199 Ga0307414_10004757 3300032004 Bacteria 7410
200 Ga0307414_10111195 3300032004 Bacteria 2086
201 Ga0307415_100007615 3300032126 Bacteria 5936
202 Ga0307415_100316824 3300032126 Bacteria 1299
203 Ga0395900_0225000 3300037418 Bacteria 1889
204 Ga0395898_0092506 3300037466 Bacteria 2908
205 Ga0436364_0215665 3300037853 Bacteria 1182
206 Ga0395901_0348847 3300038443 Bacteria 1528
207 Ga0242419_000158 3300038698 Bacteria 3463
208 Ga0242420_001375 3300038996 Bacteria 3227
209 Ga0439439_0028483 3300041406 Bacteria 1415
210 Ga0439453_0016226 3300041408 Bacteria 1296
211 Ga0439445_0004228 3300042004 Bacteria 3250
212 Ga0439446_0005275 3300042156 Bacteria 3318
213 Ga0451576_0120695 3300045051 Bacteria 2729
214 Ga0451576_0121121 3300045051 Bacteria 2724
215 Ga0495588_0082405 3300046674 Bacteria 1680
216 Ga0496102_0121760 3300048905 Bacteria 2437
217 Ga0496103_0090065 3300048906 Bacteria 1936
218 Ga0496109_0047238 3300048912 Bacteria 3914
219 Ga0496110_0139335 3300048913 Bacteria 2193
220 Ga0496112_0304727 3300048915 Bacteria 1538
221 Ga0496113_0071192 3300048916 Bacteria 2645
222 Ga0501296_006608 3300049519 Bacteria 1318
223 Ga0501198_000720 3300049649 Bacteria 4118
224 Ga0501202_006907 3300049652 Bacteria 2043
225 Ga0501207_000584 3300049654 Unclassified 4188
226 Ga0501216_005787 3300049660 Unclassified 1875
227 Ga0501217_000323 3300049661 Bacteria 7619
228 Ga0501217_025805 3300049661 Bacteria 1416
229 Ga0501223_000669 3300049663 Bacteria 8204
230 Ga0501224_000365 3300049664 Bacteria 5310
231 Ga0501233_000757 3300049668 Bacteria 5378
232 Ga0501233_002022 3300049668 Unclassified 3537
233 Ga0501235_016574 3300049669 Unclassified 1628
234 Ga0501249_008916 3300049679 Unclassified 2084
235 Ga0501257_005246 3300049686 Bacteria 2851
236 Ga0501260_001265 3300049689 Unclassified 2071
237 Ga0501225_0001664 3300049705 Bacteria 6944
238 Ga0501225_0003879 3300049705 Unclassified 4484
239 Ga0501234_000568 3300049707 Bacteria 5639
240 Ga0501226_000326 3300049853 Bacteria 6997
241 nmdc:mga08y16_41383_c1 3300050511 Bacteria 4827
242 nmdc:mga08y16_5097_c1 3300050511 Bacteria 13730
243 nmdc:mga0a205_292517_c1 3300050515 Bacteria 1503
244 nmdc:mga0a205_4414_c1 3300050515 Bacteria 12622
245 nmdc:mga0a205_45468_c2 3300050515 Bacteria 3599
246 Ga0495612_0003231 3300053078 Bacteria 6758
247 2956900293 2956897341 Bacteria 5447711
248 Ga0501068_0035981
249 SwRhRL2b_contig_2270254
250 SwRhRL2b_contig_3425394
251 JGI24751J29686_10000116
252 Ga0065704_10087485
253 Ga0065712_10001471
254 Ga0065712_10068286
255 Ga0065715_10041129
256 Ga0065715_10093986
257 Ga0065715_10097881
258 Ga0065707_10008796
259 Ga0070690_100002019
260 Ga0070670_100001388
261 Ga0070670_100189097
262 Ga0070682_100008098
263 Ga0068868_100114434
264 Ga0070689_100013747
265 Ga0070692_10031284
266 Ga0070692_10093764
267 Ga0070669_100003460
268 Ga0070669_100018939
269 Ga0070669_100122594
270 Ga0070675_100014490
271 Ga0070675_100056719
272 Ga0070671_100108843
273 Ga0070673_100206084
274 Ga0070705_100117108
275 Ga0070700_100000061
276 Ga0070700_100046339
277 Ga0070694_100030085
278 Ga0070694_100031796
279 Ga0070694_100072816
280 Ga0070708_100278835
281 Ga0070678_100294442
282 Ga0070662_100046822
283 Ga0070681_10084921
284 Ga0070707_100000289
285 Ga0070707_100050355
286 Ga0070698_100032248
287 Ga0070699_100000582
288 Ga0070699_100106680
289 Ga0070679_100078836
290 Ga0070679_100090548
291 Ga0068853_100066681
292 Ga0070686_100005456
293 Ga0070695_100013925
294 Ga0070695_100019485
295 Ga0070696_100005510
296 Ga0070696_100012623
297 Ga0070696_100050364
298 Ga0070693_100096743
299 Ga0070704_100041132
300 Ga0070704_100050474
301 Ga0070704_100279667
302 Ga0068857_100063704
303 Ga0068857_100167450
304 Ga0068859_100001995
305 Ga0068859_100004941
306 Ga0068859_100041609
307 Ga0068859_100051598
308 Ga0068859_100136860
309 Ga0068859_100190279
310 Ga0068859_100487062
311 Ga0068864_100019001
312 Ga0068864_100054483
313 Ga0068864_100066239
314 Ga0068864_100103693
315 Ga0068864_100181648
316 Ga0068861_100395795
317 Ga0068870_10031746
318 Ga0068863_100038488
319 Ga0068863_100115939
320 Ga0068858_100030877
321 Ga0068858_100142231
322 Ga0068858_100143113
323 Ga0068858_100250360
324 Ga0068860_100023000
325 Ga0068860_100033732
326 Ga0068860_100060981
327 Ga0068860_100063377
328 Ga0068860_100172823
329 Ga0068860_100227811
330 Ga0097621_100100931
331 Ga0068871_100004678
332 Ga0068871_100133206
333 Ga0075428_100020503
334 Ga0075433_10015162
335 Ga0075433_10456108
336 Ga0075434_100081044
337 Ga0075429_100036211
338 Ga0068865_100086434
339 Ga0097620_100001995
340 Ga0097620_100004941
341 Ga0097620_100041606
342 Ga0097620_100051598
343 Ga0097620_100136856
344 Ga0097620_100190285
345 Ga0097620_100487040
346 Ga0105240_10670534
347 Ga0111539_10005314
348 Ga0111539_10031753
349 Ga0111539_10387891
350 Ga0105247_10000155
351 Ga0114129_10235367
352 Ga0105243_10002177
353 Ga0105243_10051811
354 Ga0105243_10083500
355 Ga0105243_10344474
356 Ga0105241_10220173
357 Ga0105242_10006371
358 Ga0105248_10008147
359 Ga0105248_10009218
360 Ga0105248_10043897
361 Ga0105248_10120247
362 Ga0105248_10495307
363 Ga0105248_10550366
364 Ga0105237_10390919
365 Ga0105238_10004871
366 Ga0105238_10005639
367 Ga0105249_10006188
368 Ga0105249_10084098
369 Ga0105246_10133965
370 Ga0157373_10066205
371 Ga0157373_10079217
372 Ga0157378_10112021
373 Ga0163162_10087480
374 Ga0163163_10000382
375 Ga0163163_10086705
376 Ga0157380_10123808
377 Ga0157380_10145002
378 Ga0157380_10413695
379 Ga0157377_10068972
380 Ga0157379_10039673
381 Ga0207710_10000515
382 Ga0207647_10078051
383 Ga0207647_10104015
384 Ga0207643_10020796
385 Ga0207643_10057440
386 Ga0207707_10111578
387 Ga0207707_10121530
388 Ga0207662_10001148
389 Ga0207662_10167284
390 Ga0207652_10102844
391 Ga0207652_10148541
392 Ga0207646_10000140
393 Ga0207681_10007884
394 Ga0207681_10121995
395 Ga0207694_10003019
396 Ga0207694_10032697
397 Ga0207650_10000374
398 Ga0207650_10086420
399 Ga0207709_10002737
400 Ga0207709_10041589
401 Ga0207670_10002681
402 Ga0207670_10163515
403 Ga0207704_10046680
404 Ga0207711_10002408
405 Ga0207711_10005365
406 Ga0207711_10035923
407 Ga0207689_10313283
408 Ga0207651_10164423
409 Ga0207651_10222061
410 Ga0207712_10018635
411 Ga0207703_10078907
412 Ga0207703_10113683
413 Ga0207708_10000073
414 Ga0207708_10002295
415 Ga0207708_10010714
416 Ga0207708_10024811
417 Ga0207641_10065219
418 Ga0207641_10116621
419 Ga0207676_10041019
420 Ga0207676_10168251
421 Ga0207676_10200841
422 Ga0207674_10004953
423 Ga0207674_10076914
424 Ga0207675_100082791
425 Ga0207675_100480470
426 Ga0207428_10004003
427 Ga0207428_10017065
428 Ga0207428_10106650
429 Ga0268265_10266897
430 Ga0268264_10058889
431 Ga0268264_10147975
432 Ga0265318_10000836
433 Ga0265330_10017994
434 Ga0265332_10004360
435 Ga0265320_10005548
436 Ga0265329_10023548
437 Ga0265339_10031497
438 Ga0265331_10000601
439 Ga0265316_10002219
440 Ga0307408_100016327
441 Ga0265314_10017559
442 Ga0265342_10015338
443 Ga0307406_10008877
444 Ga0307412_10008162
445 Ga0307416_100017971
446 Ga0307414_10004757
447 Ga0307414_10111195
448 Ga0307415_100007615
449 Ga0307415_100316824
450 Ga0395900_0225000
451 Ga0395898_0092506
452 Ga0436364_0215665
453 Ga0395901_0348847
454 Ga0242419_000158
455 Ga0242420_001375
456 Ga0439439_0028483
457 Ga0439453_0016226
458 Ga0439445_0004228
459 Ga0439446_0005275
460 Ga0451576_0120695
461 Ga0451576_0121121
462 Ga0495588_0082405
463 Ga0496102_0121760
464 Ga0496103_0090065
465 Ga0496109_0047238
466 Ga0496110_0139335
467 Ga0496112_0304727
468 Ga0496113_0071192
469 Ga0501296_006608
470 Ga0501198_000720
471 Ga0501202_006907
472 Ga0501207_000584
473 Ga0501216_005787
474 Ga0501217_000323
475 Ga0501217_025805
476 Ga0501223_000669
477 Ga0501224_000365
478 Ga0501233_000757
479 Ga0501233_002022
480 Ga0501235_016574
481 Ga0501249_008916
482 Ga0501257_005246
483 Ga0501260_001265
484 Ga0501225_0001664
485 Ga0501225_0003879
486 Ga0501234_000568
487 Ga0501226_000326
488 nmdc:mga08y16_41383_c1
489 nmdc:mga08y16_5097_c1
490 nmdc:mga0a205_292517_c1
491 nmdc:mga0a205_4414_c1
492 nmdc:mga0a205_45468_c2
493 Ga0495612_0003231
494 2956900293

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03193

RsgA_GTPase

RsgA GTPase

121

296

0.98

PF00005

ABC_tran

ABC transporter

219

387

0.79

PF01926

MMR_HSR1

50S ribosome-binding GTPase

230

337

0.68

Structural Annotation

Top 5 Hits

ID Description Score Start End
6h4d-assembly1.cif.gz_A crystal structure of rsga from pseudomonas aeruginosa 0.8049 24 317
2cxx-assembly3.cif.gz_C crystal structure of a probable gtp-binding protein engb 0.8002 131 189
2rcn-assembly1.cif.gz_A crystal structure of the ribosomal interacting gtpase yjeq from the enterobacterial species salmonella typhimurium. 0.7995 24 321
5no4-assembly1.cif.gz_Z rsga-gdpnp bound to the 30s ribosomal subunit (rsga assembly intermediate with us3) 0.7988 24 319
5uz4-assembly1.cif.gz_Z the cryo-em structure of yjeq bound to the 30s subunit suggests a fidelity checkpoint function for this protein in ribosome assembly 0.7984 24 326
ID Description Score Start End Superfamily
1u0lC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8474 107 255 3.40.50.300
af_P39286_103_275_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8305 94 261 3.40.50.300
af_Q8IQ13_17_92_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8268 22 88 2.40.50.140
af_O05873_98_267_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8156 90 261 3.40.50.300
af_O05873_98_267_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8112 90 261 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A168MT13-F1-model_v4 EngC GTPase domain-containing protein 0.9586 1 177 GO:0003924
GO:0005525
AF-A0A2V9BM35-F1-model_v4 Ribosome small subunit-dependent GTPase 0.9578 1 205 GO:0003924
GO:0005525
AF-A0A350XMK2-F1-model_v4 Ribosome small subunit-dependent GTPase 0.9539 1 152 GO:0003924
GO:0005525
AF-A0A7C8DL02-F1-model_v4 deleted 0.9538 19 212
AF-A0A0S8IZG5-F1-model_v4 GTPase RsgA 0.9535 84 349 GO:0003924
GO:0005525
GO:0019843
GO:0042254

Map