F358900

General Info

Members Datasets Scaffolds Average Seq Length
247 158 494 358

Family's Representative Sequence

Representative Sequence 3300006175|Ga0070712_100003630|Ga0070712_1000036303
Length 396
Sequence MVLVARENKDPTSGFPVLRGMRYDLLNYEDHSPRHLRAMAGNSFGTLFRFTTWGESHGPAIGVVVDGVPPRLPLAEPDIQHWLDKRKPGQSRYTTQRREADLVRIMSGTFDGVTTGTPIQLVIENTDQRSKDYRNIADRFRPGHADYTYWKKYGIRDYRGGGRASARETASRVAAGAVARKILGPGVTIRGALVQIGPHAIDRSTWDWRATEENPFWCPDAAAALRWADYLDGVRKAGSSAGAIIEIVASGVPAGLGEPVYDKLDGDLARGLMTINAVKGVEIGTGFSAATLNGEENSDEMRIEDGRVVFLSNNAGGVLGGISTGQDIVARFAVKPTSSILRPMRTVDVDGNEVEIETHGRHDPCVGIRAVPVGEAMVACVLADHLLRHRAIGGGI

Samples

Sample ID Description Type Environment
1 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
50 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
51 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
79 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
86 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
87 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
88 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
89 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
90 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
101 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
102 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
103 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
104 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
107 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
108 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
109 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
110 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
118 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
123 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
124 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
125 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
126 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
127 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
128 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
129 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
130 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
131 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
132 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
133 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
134 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
135 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
136 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
137 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
138 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
139 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
140 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
143 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
144 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
145 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
146 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
147 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
148 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
149 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
150 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
151 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
152 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
153 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
154 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
155 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
156 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
157 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
158 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.33
Metatranscriptomes 0.81
Isolates 4.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.19
Nodule 0.4
Rhizoplane 1.62
Rhizosphere 65.99
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070712_100003630 3300006175 Bacteria 9517
2 JGI24736J21556_1000037 3300001904 Bacteria 22185
3 Ga0006562J51391_1060466 3300003578 Bacteria 3060
4 Ga0006562J51391_1060471 3300003578 Bacteria 3450
5 Ga0065707_10082575 3300005295 Bacteria 13611
6 Ga0070658_10000565 3300005327 Bacteria 32188
7 Ga0070683_100157362 3300005329 Bacteria 2155
8 Ga0070680_100000555 3300005336 Bacteria 25565
9 Ga0070671_100054978 3300005355 Bacteria 3311
10 Ga0070709_10000652 3300005434 Bacteria 19741
11 Ga0070709_10007149 3300005434 Bacteria 6113
12 Ga0070714_100003276 3300005435 Bacteria 12060
13 Ga0070714_100080695 3300005435 Bacteria 2831
14 Ga0070714_100206834 3300005435 Bacteria 1798
15 Ga0070713_100011878 3300005436 Bacteria 6365
16 Ga0070710_10000869 3300005437 Bacteria 14456
17 Ga0070710_10004133 3300005437 Bacteria 6889
18 Ga0070711_100010281 3300005439 Bacteria 5788
19 Ga0070711_100057399 3300005439 Bacteria 2695
20 Ga0070708_100183602 3300005445 Bacteria 1955
21 Ga0070678_100012387 3300005456 Bacteria 5297
22 Ga0070678_100362220 3300005456 Bacteria 1250
23 Ga0070681_10000486 3300005458 Bacteria 32401
24 Ga0070706_100020022 3300005467 Bacteria 6167
25 Ga0070706_100095316 3300005467 Bacteria 2762
26 Ga0070707_100061727 3300005468 Bacteria 3595
27 Ga0070698_100001984 3300005471 Bacteria 22716
28 Ga0070698_100005436 3300005471 Bacteria 13910
29 Ga0070698_100042416 3300005471 Bacteria 4666
30 Ga0070698_100277137 3300005471 Bacteria 1609
31 Ga0070679_100003061 3300005530 Bacteria 15282
32 Ga0070697_100354771 3300005536 Bacteria 1267
33 Ga0070697_100382780 3300005536 Bacteria 1219
34 Ga0070665_100051425 3300005548 Bacteria 4132
35 Ga0070665_100091201 3300005548 Bacteria 3053
36 Ga0070665_100241346 3300005548 Bacteria 1807
37 Ga0068855_100006943 3300005563 Bacteria 13736
38 Ga0068855_100140521 3300005563 Bacteria 2753
39 Ga0068856_100005235 3300005614 Bacteria 12797
40 Ga0068856_100085619 3300005614 Bacteria 3131
41 Ga0068859_100158081 3300005617 Bacteria 2345
42 Ga0081455_10002027 3300005937 Bacteria 24230
43 Ga0081455_10014889 3300005937 Bacteria 7582
44 Ga0081455_10027922 3300005937 Bacteria 5163
45 Ga0081538_10001815 3300005981 Bacteria 21494
46 Ga0070717_10002845 3300006028 Bacteria 12269
47 Ga0070717_10135251 3300006028 Bacteria 2122
48 Ga0070717_10207668 3300006028 Bacteria 1718
49 Ga0075365_10017419 3300006038 Bacteria 4395
50 Ga0075365_10066923 3300006038 Bacteria 2411
51 Ga0075368_10000246 3300006042 Bacteria 15331
52 Ga0075363_100033714 3300006048 Bacteria 2669
53 Ga0070716_100025120 3300006173 Bacteria 3176
54 Ga0070716_100220092 3300006173 Bacteria 1275
55 Ga0070712_100055603 3300006175 Bacteria 2772
56 Ga0075362_10006860 3300006177 Bacteria 4265
57 Ga0075362_10013576 3300006177 Bacteria 3264
58 Ga0075362_10046855 3300006177 Bacteria 1924
59 Ga0075367_10000565 3300006178 Bacteria 14112
60 Ga0075369_10000999 3300006186 Bacteria 9431
61 Ga0075369_10041401 3300006186 Bacteria 1972
62 Ga0075370_10028779 3300006353 Bacteria 3091
63 Ga0075370_10029398 3300006353 Bacteria 3061
64 Ga0075436_100015901 3300006914 Bacteria 5150
65 Ga0097620_100158076 3300006931 Bacteria 2345
66 Ga0075435_100025413 3300007076 Bacteria 4610
67 Ga0105240_10002068 3300009093 Bacteria 32884
68 Ga0105240_10002148 3300009093 Bacteria 32199
69 Ga0105240_10006465 3300009093 Bacteria 17218
70 Ga0111539_10140817 3300009094 Bacteria 2824
71 Ga0111539_10449199 3300009094 Bacteria 1501
72 Ga0105237_10078385 3300009545 Bacteria 3294
73 Ga0105238_10014173 3300009551 Bacteria 8062
74 Ga0105239_10037401 3300010375 Bacteria 5322
75 Ga0157369_10056055 3300013105 Bacteria 4253
76 Ga0157372_10026143 3300013307 Bacteria 6351
77 Ga0163163_10242240 3300014325 Bacteria 1853
78 Ga0213872_10089532 3300021361 Bacteria 1378
79 Ga0213876_10000543 3300021384 Bacteria 28405
80 Ga0213876_10002326 3300021384 Bacteria 11218
81 Ga0213876_10032874 3300021384 Bacteria 2735
82 Ga0213876_10041033 3300021384 Bacteria 2446
83 Ga0213875_10000329 3300021388 Bacteria 45094
84 Ga0213875_10000936 3300021388 Bacteria 20989
85 Ga0213875_10004240 3300021388 Bacteria 7911
86 Ga0209676_1005810 3300025292 Bacteria 6309
87 Ga0207426_1024195 3300025302 Bacteria 2063
88 Ga0207692_10001993 3300025898 Bacteria 7798
89 Ga0207642_10119034 3300025899 Bacteria 1359
90 Ga0207699_10000253 3300025906 Bacteria 29543
91 Ga0207699_10166367 3300025906 Bacteria 1472
92 Ga0207705_10003960 3300025909 Bacteria 11260
93 Ga0207684_10023043 3300025910 Bacteria 5318
94 Ga0207684_10065158 3300025910 Bacteria 3094
95 Ga0207684_10080658 3300025910 Bacteria 2768
96 Ga0207707_10002120 3300025912 Bacteria 17961
97 Ga0207695_10000946 3300025913 Bacteria 51636
98 Ga0207695_10003359 3300025913 Bacteria 22615
99 Ga0207695_10013298 3300025913 Bacteria 9820
100 Ga0207695_10126497 3300025913 Bacteria 2517
101 Ga0207693_10004024 3300025915 Bacteria 12494
102 Ga0207663_10000913 3300025916 Bacteria 13487
103 Ga0207660_10000542 3300025917 Bacteria 25359
104 Ga0207657_10268656 3300025919 Bacteria 1356
105 Ga0207652_10004044 3300025921 Bacteria 11972
106 Ga0207652_10108846 3300025921 Bacteria 2456
107 Ga0207646_10059773 3300025922 Bacteria 3404
108 Ga0207646_10136129 3300025922 Bacteria 2212
109 Ga0207694_10067326 3300025924 Bacteria 2795
110 Ga0207687_10108616 3300025927 Bacteria 2054
111 Ga0207664_10302562 3300025929 Bacteria 1407
112 Ga0207665_10010007 3300025939 Bacteria 6226
113 Ga0207665_10036877 3300025939 Bacteria 3253
114 Ga0207679_10027036 3300025945 Bacteria 3963
115 Ga0207667_10003468 3300025949 Bacteria 19461
116 Ga0207667_10135088 3300025949 Bacteria 2540
117 Ga0207702_10111935 3300026078 Bacteria 2429
118 Ga0207683_10029452 3300026121 Bacteria 4753
119 Ga0209813_10000061 3300027866 Bacteria 43981
120 Ga0268266_10000850 3300028379 Bacteria 39769
121 Ga0268266_10012905 3300028379 Bacteria 7209
122 Ga0265334_10012086 3300028573 Bacteria 3628
123 Ga0265334_10022483 3300028573 Bacteria 2569
124 Ga0265338_10005638 3300028800 Bacteria 16254
125 Ga0265338_10029690 3300028800 Bacteria 5413
126 Ga0265338_10085193 3300028800 Bacteria 2635
127 Ga0265338_10099937 3300028800 Bacteria 2368
128 Ga0265338_10163228 3300028800 Bacteria 1718
129 Ga0265340_10018330 3300031247 Bacteria 3611
130 Ga0265340_10037083 3300031247 Bacteria 2415
131 Ga0316575_10058975 3300031665 Bacteria 1531
132 Ga0265314_10011438 3300031711 Bacteria 7325
133 Ga0265314_10138041 3300031711 Bacteria 1511
134 Ga0316578_10128491 3300031728 Bacteria 1524
135 Ga0307407_10078732 3300031903 Bacteria 1987
136 Ga0307412_10014587 3300031911 Bacteria 4639
137 Ga0307414_10017429 3300032004 Bacteria 4394
138 Ga0307414_10117597 3300032004 Bacteria 2037
139 Ga0307414_10134907 3300032004 Bacteria 1923
140 Ga0307414_10221560 3300032004 Bacteria 1553
141 Ga0316583_10031247 3300032133 Bacteria 1896
142 Ga0373954_0075244 3300035118 Bacteria 1608
143 Ga0373943_0047839 3300035170 Bacteria 2093
144 Ga0373931_0081271 3300035691 Bacteria 1789
145 Ga0373935_0055792 3300035692 Bacteria 2518
146 Ga0373927_0153097 3300035695 Bacteria 1510
147 Ga0373937_0201334 3300036401 Bacteria 1872
148 Ga0316584_0096518 3300036712 Bacteria 2213
149 Ga0395899_0000004 3300037312 Bacteria 874267
150 Ga0395899_0004413 3300037312 Bacteria 10975
151 Ga0395899_0047770 3300037312 Bacteria 3186
152 Ga0395899_0237311 3300037312 Bacteria 1256
153 Ga0395900_0011297 3300037418 Bacteria 9134
154 Ga0395900_0015646 3300037418 Bacteria 7733
155 Ga0395900_0052941 3300037418 Bacteria 4178
156 Ga0395898_0011421 3300037466 Bacteria 9225
157 Ga0436364_0232247 3300037853 Bacteria 20408
158 Ga0436364_0992577 3300037853 Bacteria 61189
159 Ga0436364_1071861 3300037853 Bacteria 2122
160 Ga0436364_1230766 3300037853 Bacteria 152032
161 Ga0436364_1506282 3300037853 Bacteria 3638
162 Ga0436364_1536001 3300037853 Bacteria 7107
163 Ga0395901_0001146 3300038443 Bacteria 28080
164 Ga0395901_0025350 3300038443 Bacteria 6087
165 Ga0395901_0026337 3300038443 Bacteria 5971
166 Ga0395901_0036075 3300038443 Bacteria 5108
167 Ga0395901_0037775 3300038443 Bacteria 4994
168 Ga0400483_083490 3300039062 Bacteria 11986
169 Ga0400483_187375 3300039062 Bacteria 1234
170 Ga0400483_211925 3300039062 Bacteria 6034
171 Ga0436365_0209892 3300039437 Bacteria 72774
172 Ga0436365_0561583 3300039437 Bacteria 3513
173 Ga0436365_1449349 3300039437 Bacteria 1729
174 Ga0436365_1707303 3300039437 Bacteria 7296
175 Ga0436365_1721551 3300039437 Bacteria 1817
176 Ga0436360_0779588 3300039438 Bacteria 2639
177 Ga0436361_0289334 3300039447 Bacteria 1359
178 Ga0436361_0825341 3300039447 Bacteria 1513
179 Ga0436361_1084501 3300039447 Bacteria 4271
180 Ga0436363_0007143 3300039450 Bacteria 4026
181 Ga0436363_0029830 3300039450 Bacteria 3654
182 Ga0436363_0719732 3300039450 Bacteria 5113
183 Ga0436363_1171761 3300039450 Bacteria 3369
184 Ga0436362_0790093 3300039453 Bacteria 1183
185 Ga0466963_0020121 3300044694 Bacteria 4195
186 Ga0451576_0000842 3300045051 Bacteria 59694
187 Ga0495633_0001025 3300046558 Bacteria 22844
188 Ga0495667_0033081 3300046559 Bacteria 3460
189 Ga0495613_0000188 3300046689 Bacteria 60791
190 Ga0495649_0000402 3300046694 Bacteria 37481
191 Ga0496107_0040460 3300048910 Bacteria 3346
192 Ga0496107_0057032 3300048910 Bacteria 2823
193 Ga0496112_0076447 3300048915 Bacteria 3311
194 Ga0496115_0054500 3300048918 Bacteria 3211
195 Ga0496116_0008308 3300048919 Bacteria 9022
196 Ga0496121_0056297 3300048924 Bacteria 3267
197 Ga0496122_0006684 3300048925 Bacteria 13133
198 Ga0496123_0000512 3300048926 Bacteria 67458
199 Ga0496125_0000462 3300048928 Bacteria 72795
200 Ga0501031_0135721 3300049568 Bacteria 1607
201 Ga0501034_0005481 3300049571 Bacteria 13853
202 Ga0501034_0010756 3300049571 Bacteria 9502
203 Ga0501037_0010623 3300049573 Bacteria 6766
204 Ga0501046_0013162 3300049580 Bacteria 7020
205 Ga0501068_0021417 3300049584 Bacteria 3775
206 Ga0501071_0195733 3300049587 Bacteria 1517
207 Ga0501081_0141839 3300049743 Bacteria 1722
208 Ga0501044_0032462 3300049823 Bacteria 5489
209 nmdc:mga03683_1700_c1 3300050489 Bacteria 6633
210 nmdc:mga03683_2363_c1 3300050489 Bacteria 5843
211 nmdc:mga03683_26053_c1 3300050489 Bacteria 2303
212 nmdc:mga03683_39913_c1 3300050489 Bacteria 1923
213 nmdc:mga0yw44_168248_c1 3300050492 Bacteria 1438
214 nmdc:mga06z11_301_c1 3300050494 Bacteria 18927
215 nmdc:mga04h51_41_c1 3300050495 Bacteria 43980
216 nmdc:mga07m45_104064_c1 3300050496 Bacteria 1632
217 nmdc:mga07m45_1617_c1 3300050496 Bacteria 10375
218 nmdc:mga0n895_109571_c1 3300050512 Bacteria 2776
219 nmdc:mga0sz30_11422_c1 3300050516 Bacteria 3428
220 nmdc:mga0sz30_813_c1 3300050516 Bacteria 11263
221 Ga0495619_0109857 3300053085 Bacteria 1883
222 Ga0500651_0047943 3300053093 Bacteria 2685
223 Ga0500595_003113 3300053119 Bacteria 7854
224 Ga0500595_007510 3300053119 Bacteria 4522
225 Ga0500614_012428 3300053123 Bacteria 1858
226 Ga0500652_001996 3300053131 Bacteria 6144
227 Ga0500559_0000001 3300053136 Bacteria 325464
228 Ga0500568_0006222 3300053139 Bacteria 6025
229 Ga0500573_0087961 3300053140 Bacteria 1758
230 Ga0500616_0003483 3300053153 Bacteria 11969
231 Ga0500622_0087682 3300053156 Bacteria 1549
232 Ga0500636_0012679 3300053177 Bacteria 4941
233 Ga0500637_0004105 3300053178 Bacteria 6851
234 Ga0500645_004778 3300053730 Bacteria 5128
235 Ga0500552_000430 3300053733 Bacteria 3891
236 2512034049 2511231221 Bacteria 6846400
237 2599105752 2597490356 Bacteria 7030811
238 2643884944 2643221574 Bacteria 2789653
239 2644550869 2643221699 Bacteria 5731501
240 2842335056 2842333319 Bacteria 8899485
241 2842780185 2842775625 Bacteria 5587290
242 2846954561 2846952575 Bacteria 6587527
243 2883577282 2883577096 Bacteria 4709178
244 2928972671 2928972540 Bacteria 3058286
245 2941487042 2941485952 Bacteria 3591484
246 2977242451 2977240413 Bacteria 3191065
247 8054004465 8054002106 Bacteria 7987183
248 Ga0070712_100003630
249 JGI24736J21556_1000037
250 Ga0006562J51391_1060466
251 Ga0006562J51391_1060471
252 Ga0065707_10082575
253 Ga0070658_10000565
254 Ga0070683_100157362
255 Ga0070680_100000555
256 Ga0070671_100054978
257 Ga0070709_10000652
258 Ga0070709_10007149
259 Ga0070714_100003276
260 Ga0070714_100080695
261 Ga0070714_100206834
262 Ga0070713_100011878
263 Ga0070710_10000869
264 Ga0070710_10004133
265 Ga0070711_100010281
266 Ga0070711_100057399
267 Ga0070708_100183602
268 Ga0070678_100012387
269 Ga0070678_100362220
270 Ga0070681_10000486
271 Ga0070706_100020022
272 Ga0070706_100095316
273 Ga0070707_100061727
274 Ga0070698_100001984
275 Ga0070698_100005436
276 Ga0070698_100042416
277 Ga0070698_100277137
278 Ga0070679_100003061
279 Ga0070697_100354771
280 Ga0070697_100382780
281 Ga0070665_100051425
282 Ga0070665_100091201
283 Ga0070665_100241346
284 Ga0068855_100006943
285 Ga0068855_100140521
286 Ga0068856_100005235
287 Ga0068856_100085619
288 Ga0068859_100158081
289 Ga0081455_10002027
290 Ga0081455_10014889
291 Ga0081455_10027922
292 Ga0081538_10001815
293 Ga0070717_10002845
294 Ga0070717_10135251
295 Ga0070717_10207668
296 Ga0075365_10017419
297 Ga0075365_10066923
298 Ga0075368_10000246
299 Ga0075363_100033714
300 Ga0070716_100025120
301 Ga0070716_100220092
302 Ga0070712_100055603
303 Ga0075362_10006860
304 Ga0075362_10013576
305 Ga0075362_10046855
306 Ga0075367_10000565
307 Ga0075369_10000999
308 Ga0075369_10041401
309 Ga0075370_10028779
310 Ga0075370_10029398
311 Ga0075436_100015901
312 Ga0097620_100158076
313 Ga0075435_100025413
314 Ga0105240_10002068
315 Ga0105240_10002148
316 Ga0105240_10006465
317 Ga0111539_10140817
318 Ga0111539_10449199
319 Ga0105237_10078385
320 Ga0105238_10014173
321 Ga0105239_10037401
322 Ga0157369_10056055
323 Ga0157372_10026143
324 Ga0163163_10242240
325 Ga0213872_10089532
326 Ga0213876_10000543
327 Ga0213876_10002326
328 Ga0213876_10032874
329 Ga0213876_10041033
330 Ga0213875_10000329
331 Ga0213875_10000936
332 Ga0213875_10004240
333 Ga0209676_1005810
334 Ga0207426_1024195
335 Ga0207692_10001993
336 Ga0207642_10119034
337 Ga0207699_10000253
338 Ga0207699_10166367
339 Ga0207705_10003960
340 Ga0207684_10023043
341 Ga0207684_10065158
342 Ga0207684_10080658
343 Ga0207707_10002120
344 Ga0207695_10000946
345 Ga0207695_10003359
346 Ga0207695_10013298
347 Ga0207695_10126497
348 Ga0207693_10004024
349 Ga0207663_10000913
350 Ga0207660_10000542
351 Ga0207657_10268656
352 Ga0207652_10004044
353 Ga0207652_10108846
354 Ga0207646_10059773
355 Ga0207646_10136129
356 Ga0207694_10067326
357 Ga0207687_10108616
358 Ga0207664_10302562
359 Ga0207665_10010007
360 Ga0207665_10036877
361 Ga0207679_10027036
362 Ga0207667_10003468
363 Ga0207667_10135088
364 Ga0207702_10111935
365 Ga0207683_10029452
366 Ga0209813_10000061
367 Ga0268266_10000850
368 Ga0268266_10012905
369 Ga0265334_10012086
370 Ga0265334_10022483
371 Ga0265338_10005638
372 Ga0265338_10029690
373 Ga0265338_10085193
374 Ga0265338_10099937
375 Ga0265338_10163228
376 Ga0265340_10018330
377 Ga0265340_10037083
378 Ga0316575_10058975
379 Ga0265314_10011438
380 Ga0265314_10138041
381 Ga0316578_10128491
382 Ga0307407_10078732
383 Ga0307412_10014587
384 Ga0307414_10017429
385 Ga0307414_10117597
386 Ga0307414_10134907
387 Ga0307414_10221560
388 Ga0316583_10031247
389 Ga0373954_0075244
390 Ga0373943_0047839
391 Ga0373931_0081271
392 Ga0373935_0055792
393 Ga0373927_0153097
394 Ga0373937_0201334
395 Ga0316584_0096518
396 Ga0395899_0000004
397 Ga0395899_0004413
398 Ga0395899_0047770
399 Ga0395899_0237311
400 Ga0395900_0011297
401 Ga0395900_0015646
402 Ga0395900_0052941
403 Ga0395898_0011421
404 Ga0436364_0232247
405 Ga0436364_0992577
406 Ga0436364_1071861
407 Ga0436364_1230766
408 Ga0436364_1506282
409 Ga0436364_1536001
410 Ga0395901_0001146
411 Ga0395901_0025350
412 Ga0395901_0026337
413 Ga0395901_0036075
414 Ga0395901_0037775
415 Ga0400483_083490
416 Ga0400483_187375
417 Ga0400483_211925
418 Ga0436365_0209892
419 Ga0436365_0561583
420 Ga0436365_1449349
421 Ga0436365_1707303
422 Ga0436365_1721551
423 Ga0436360_0779588
424 Ga0436361_0289334
425 Ga0436361_0825341
426 Ga0436361_1084501
427 Ga0436363_0007143
428 Ga0436363_0029830
429 Ga0436363_0719732
430 Ga0436363_1171761
431 Ga0436362_0790093
432 Ga0466963_0020121
433 Ga0451576_0000842
434 Ga0495633_0001025
435 Ga0495667_0033081
436 Ga0495613_0000188
437 Ga0495649_0000402
438 Ga0496107_0040460
439 Ga0496107_0057032
440 Ga0496112_0076447
441 Ga0496115_0054500
442 Ga0496116_0008308
443 Ga0496121_0056297
444 Ga0496122_0006684
445 Ga0496123_0000512
446 Ga0496125_0000462
447 Ga0501031_0135721
448 Ga0501034_0005481
449 Ga0501034_0010756
450 Ga0501037_0010623
451 Ga0501046_0013162
452 Ga0501068_0021417
453 Ga0501071_0195733
454 Ga0501081_0141839
455 Ga0501044_0032462
456 nmdc:mga03683_1700_c1
457 nmdc:mga03683_2363_c1
458 nmdc:mga03683_26053_c1
459 nmdc:mga03683_39913_c1
460 nmdc:mga0yw44_168248_c1
461 nmdc:mga06z11_301_c1
462 nmdc:mga04h51_41_c1
463 nmdc:mga07m45_104064_c1
464 nmdc:mga07m45_1617_c1
465 nmdc:mga0n895_109571_c1
466 nmdc:mga0sz30_11422_c1
467 nmdc:mga0sz30_813_c1
468 Ga0495619_0109857
469 Ga0500651_0047943
470 Ga0500595_003113
471 Ga0500595_007510
472 Ga0500614_012428
473 Ga0500652_001996
474 Ga0500559_0000001
475 Ga0500568_0006222
476 Ga0500573_0087961
477 Ga0500616_0003483
478 Ga0500622_0087682
479 Ga0500636_0012679
480 Ga0500637_0004105
481 Ga0500645_004778
482 Ga0500552_000430
483 2512034049
484 2599105752
485 2643884944
486 2644550869
487 2842335056
488 2842780185
489 2846954561
490 2883577282
491 2928972671
492 2941487042
493 2977242451
494 8054004465

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01264

Chorismate_synt

Chorismate synthase

48

387

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5z9a-assembly1.cif.gz_B crystal structure of chorismate synthase from pseudomonas aeruginosa 0.9182 1 352
5z9a-assembly1.cif.gz_B crystal structure of chorismate synthase from pseudomonas aeruginosa 0.9146 1 352
5wuy-assembly1.cif.gz_B crystal structure of chorismate synthase from acinetobacter baumannii at 2.50a resolution 0.9136 1 353
5z9a-assembly1.cif.gz_A crystal structure of chorismate synthase from pseudomonas aeruginosa 0.9117 1 355
5z9a-assembly1.cif.gz_A crystal structure of chorismate synthase from pseudomonas aeruginosa 0.9082 1 355
ID Description Score Start End Superfamily
af_Q58575_11_372_3.60.150.10 Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC 0.9527 10 349 3.60.150.10
af_P12008_1_360_3.60.150.10 Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC 0.9511 1 355 3.60.150.10
af_A0A1D8PTK1_42_412_3.60.150.10 Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC 0.9455 10 354 3.60.150.10
af_P12008_1_360_3.60.150.10 Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC 0.9433 1 355 3.60.150.10
af_P28777_108_376_3.60.150.10 Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC 0.9224 111 352 3.60.150.10
ID Description Score Start End GO Terms
AF-A0A2E1B9F5-F1-model_v4 Chorismate synthase (EC 4.2.3.5) 0.9824 125 355 GO:0004107
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0010181
AF-A0A1G3K6F4-F1-model_v4 Chorismate synthase (EC 4.2.3.5) 0.982 151 355 GO:0004107
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0010181
AF-A0A7V5NX00-F1-model_v4 Chorismate synthase (EC 4.2.3.5) 0.9794 33 354 GO:0004107
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0010181
AF-A0A3B9DKH7-F1-model_v4 deleted 0.9778 198 353
AF-A0A382USP1-F1-model_v4 chorismate synthase (EC 4.2.3.5) 0.9775 129 354 GO:0004107
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0010181

Map