F358600

General Info

Members Datasets Scaffolds Average Seq Length
246 187 197 436

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221676|2644421594
Length 510
Sequence RLMDNQDQDQEQDQDQEQDQEQEQEQEQEQEQEQEQEQEQEQEQEQEQEQEQDLIKRLLCYYGDDFTGSTDVLEALFQAGLKTILFLEPPSPEVLQEQFQDVDCFGVAGVGRSLSPEEMERELRPIFITMKMTGAVIVHYKICSTFDSSPDIGSIGKAMEIGRDVFGGRYVPLLVGVPYLRRYTLFGNHFAAAGERIHRLDRHPTMSQHPVTPMVEADIRKHLQRQTKMQTSLFDILALEGPDGEVHGKLEQLIENEQPDVVLFDVLDEPRLEKSGRLIWQEANDGEGLFVVGSSGVEYALNACWKADGILPPAEQDVVTVESVDRLLVVSGSCSPVTEKQIQRALEAGFTGIRVPMNELIQPELAQEAQLRLQQEARSVLESGRSVVLYTASGPQDQTIALIRETLAAQGLKAEDSGHLLGKALGKLTRELVAETGVSRILIAGGDTSGYITRELGIYAIACKAALEPGGPLCRAYSKEPQFDGLELVLKGGQVGGENFFEKVRVGTEL

Samples

Sample ID Description Type Environment
1 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
2 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
3 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
4 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
5 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
6 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
7 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
8 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
9 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
10 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
11 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
12 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
13 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
14 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
15 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
16 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
17 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
18 2643221599 Rhizobium sp. Root708 Isolate Unclassified
19 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
20 2738541278 Niastella sp. CF465 Isolate Unclassified
21 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
22 2818991459 Paenibacillus sp. 597 Isolate Unclassified
23 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
24 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
25 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
26 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
27 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
28 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
29 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
30 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
31 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
32 2909042592 Labrys sp. LIt4 Isolate Nodule
33 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
34 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
35 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
36 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
37 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
38 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
39 3005452660 Rhizobium grahamii BG7 Isolate Unclassified
40 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
41 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
42 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
43 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
44 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
45 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
46 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
47 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
48 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
49 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
50 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
51 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
52 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
53 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
54 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
55 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
56 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
57 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
58 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
59 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
60 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
61 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
62 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
63 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
64 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
65 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
66 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
67 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
68 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
69 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
70 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
71 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
72 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
73 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
74 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
75 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
76 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
78 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
79 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
80 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
81 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
82 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
83 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
84 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
85 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
87 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
88 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
89 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
90 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
91 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
93 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
94 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
95 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
112 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
113 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
114 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
115 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
116 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
117 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
118 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
125 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
126 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
127 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
128 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
129 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
130 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
131 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
132 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
135 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
136 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
137 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
138 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
139 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
140 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
141 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
142 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
148 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
149 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
150 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
151 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
152 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
153 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
165 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
171 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
172 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
173 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
174 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
175 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
176 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
177 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
178 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
179 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
180 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
184 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
185 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
186 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
187 8054795415 Paenibacillus periandrae PM10 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 80.08
Metatranscriptomes 0
Isolates 19.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.98
Nodule 4.47
Rhizoplane 1.63
Rhizosphere 51.63
Stem 0
Stem Tuber 0
Unclassified 18.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000465 3300002773 Bacteria 23613
2 JGI25152J39213_1000472 3300002773 Bacteria 23443
3 JGI25152J39213_1004925 3300002773 Bacteria 4051
4 JGI25150J39212_1000219 3300002774 Bacteria 31283
5 JGI25159J45721_1000036 3300002987 Bacteria 76363
6 JGI25159J45721_1000101 3300002987 Bacteria 41224
7 JGI25151J46595_10000007 3300003187 Bacteria 411751
8 JGI25151J46595_10021223 3300003187 Bacteria 2721
9 JGI25153J46596_10000254 3300003215 Bacteria 43730
10 JGI25153J46596_10020146 3300003215 Bacteria 2529
11 rootH1_10008837 3300003323 Bacteria 37199
12 JGI25160J50197_1000060 3300003354 Bacteria 116870
13 JGI25161J50226_1000085 3300003374 Bacteria 76182
14 JGI25161J50226_1000486 3300003374 Bacteria 17962
15 Ga0055524_1003923 3300003775 Bacteria 7044
16 Ga0055528_1002942 3300003790 Bacteria 8832
17 Ga0055543_1000036 3300004625 Bacteria 126054
18 Ga0055543_1000478 3300004625 Bacteria 23469
19 Ga0065165_1000160 3300005262 Bacteria 116908
20 Ga0070658_10069799 3300005327 Bacteria 2875
21 Ga0070683_100001032 3300005329 Bacteria 20903
22 Ga0070666_10172959 3300005335 Bacteria 1513
23 Ga0070680_100002320 3300005336 Bacteria 14047
24 Ga0070660_100003490 3300005339 Bacteria 10832
25 Ga0070689_100069051 3300005340 Unclassified 2756
26 Ga0070668_100041352 3300005347 Bacteria 3532
27 Ga0070668_100076237 3300005347 Bacteria 2619
28 Ga0070675_100257235 3300005354 Bacteria 1529
29 Ga0070688_100001125 3300005365 Bacteria 13396
30 Ga0070659_100003614 3300005366 Bacteria 11001
31 Ga0070679_100006562 3300005530 Bacteria 10840
32 Ga0070679_100064104 3300005530 Bacteria 3662
33 Ga0068853_100015823 3300005539 Bacteria 6195
34 Ga0068855_100039182 3300005563 Bacteria 5626
35 Ga0068857_100021699 3300005577 Bacteria 5650
36 Ga0068854_100012764 3300005578 Bacteria 5501
37 Ga0068856_100009297 3300005614 Bacteria 9549
38 Ga0068859_100024141 3300005617 Bacteria 6101
39 Ga0075363_100024168 3300006048 Bacteria 3086
40 Ga0075367_10080758 3300006178 Bacteria 1967
41 Ga0075428_100016804 3300006844 Bacteria 8080
42 Ga0075431_100013063 3300006847 Bacteria 8386
43 Ga0097620_100024141 3300006931 Bacteria 6101
44 Ga0105240_10000025 3300009093 Bacteria 367124
45 Ga0105240_10000724 3300009093 Bacteria 60274
46 Ga0105240_10002365 3300009093 Bacteria 30413
47 Ga0105240_10018533 3300009093 Bacteria 9343
48 Ga0111539_10025826 3300009094 Bacteria 7193
49 Ga0114129_10000792 3300009147 Bacteria 40543
50 Ga0105237_10338551 3300009545 Bacteria 1509
51 Ga0105238_10037023 3300009551 Bacteria 4961
52 Ga0105238_10328103 3300009551 Bacteria 1517
53 Ga0157370_10003599 3300013104 Bacteria 18124
54 Ga0157370_10006854 3300013104 Bacteria 12474
55 Ga0157370_10179448 3300013104 Bacteria 1968
56 Ga0157369_10000607 3300013105 Bacteria 46574
57 Ga0157374_10162376 3300013296 Bacteria 2176
58 Ga0163162_10412175 3300013306 Bacteria 1483
59 Ga0157372_10014241 3300013307 Bacteria 8501
60 Ga0157372_10014356 3300013307 Bacteria 8469
61 Ga0157372_10269575 3300013307 Bacteria 1978
62 Ga0209436_100133 3300025208 Bacteria 36901
63 Ga0209436_103973 3300025208 Bacteria 3749
64 Ga0209147_105750 3300025229 Bacteria 1810
65 Ga0207425_1000018 3300025245 Bacteria 411841
66 Ga0209646_1002525 3300025246 Bacteria 4003
67 Ga0209129_1000026 3300025258 Bacteria 411839
68 Ga0209129_1005510 3300025258 Bacteria 4446
69 Ga0209130_1000019 3300025284 Bacteria 381993
70 Ga0209130_1000136 3300025284 Bacteria 116996
71 Ga0209025_1000035 3300025294 Bacteria 411841
72 Ga0209025_1002615 3300025294 Bacteria 18501
73 Ga0209564_1003025 3300025295 Bacteria 12006
74 Ga0209758_1000040 3300025297 Bacteria 411841
75 Ga0209758_1001643 3300025297 Bacteria 25398
76 Ga0209758_1001926 3300025297 Bacteria 22572
77 Ga0209758_1004715 3300025297 Bacteria 11125
78 Ga0209256_1003916 3300025299 Bacteria 9837
79 Ga0207426_1000005 3300025302 Bacteria 1037188
80 Ga0207426_1000253 3300025302 Bacteria 116996
81 Ga0207647_10000821 3300025904 Bacteria 24120
82 Ga0207705_10001870 3300025909 Bacteria 16522
83 Ga0207705_10014837 3300025909 Bacteria 5602
84 Ga0207707_10008624 3300025912 Bacteria 8842
85 Ga0207695_10000025 3300025913 Bacteria 627211
86 Ga0207695_10002442 3300025913 Bacteria 27468
87 Ga0207695_10002476 3300025913 Bacteria 27192
88 Ga0207671_10004737 3300025914 Bacteria 12841
89 Ga0207660_10040268 3300025917 Bacteria 3271
90 Ga0207657_10001250 3300025919 Bacteria 27173
91 Ga0207649_10012685 3300025920 Unclassified 4683
92 Ga0207652_10014041 3300025921 Bacteria 6483
93 Ga0207694_10023561 3300025924 Bacteria 4673
94 Ga0207667_10006891 3300025949 Bacteria 13730
95 Ga0207667_10261993 3300025949 Bacteria 1768
96 Ga0207640_10008580 3300025981 Bacteria 5676
97 Ga0207678_10001283 3300026067 Bacteria 23210
98 Ga0207678_10001823 3300026067 Bacteria 19522
99 Ga0207702_10049600 3300026078 Bacteria 3543
100 Ga0207648_10012385 3300026089 Bacteria 7985
101 Ga0207674_10002524 3300026116 Bacteria 23071
102 Ga0209813_10000628 3300027866 Bacteria 8199
103 Ga0207428_10089917 3300027907 Bacteria 2386
104 Ga0307515_10000112 3300028794 Bacteria 195015
105 Ga0307513_10073843 3300031456 Bacteria 3549
106 Ga0307405_10008618 3300031731 Bacteria 5182
107 Ga0307412_10013437 3300031911 Bacteria 4803
108 Ga0307416_100226333 3300032002 Bacteria 1799
109 Ga0307510_10000118 3300033180 Bacteria 63011
110 Ga0307510_10045777 3300033180 Bacteria 4715
111 Ga0307510_10046449 3300033180 Bacteria 4668
112 Ga0373937_0040636 3300036401 Bacteria 4240
113 Ga0395899_0000004 3300037312 Bacteria 874267
114 Ga0395899_0008644 3300037312 Bacteria 7834
115 Ga0395899_0021724 3300037312 Bacteria 4867
116 Ga0395900_0008958 3300037418 Bacteria 10262
117 Ga0395901_0127945 3300038443 Bacteria 2670
118 Ga0436365_0282637 3300039437 Bacteria 3513
119 Ga0436363_0709121 3300039450 Bacteria 13005
120 Ga0439436_0020082 3300041404 Bacteria 1990
121 Ga0439461_0002780 3300041410 Bacteria 2827
122 Ga0439465_0002831 3300041413 Bacteria 5684
123 Ga0439465_0007152 3300041413 Bacteria 3548
124 Ga0451851_0326788 3300041507 Bacteria 3762
125 Ga0451853_3216054 3300041512 Unclassified 1485
126 Ga0439431_0012599 3300041997 Bacteria 1944
127 Ga0439462_0000755 3300042015 Bacteria 6714
128 Ga0466972_0012187 3300044658 Bacteria 4320
129 Ga0466957_0010144 3300044842 Bacteria 5390
130 Ga0495638_0003797 3300046460 Bacteria 11740
131 Ga0495583_0000271 3300046506 Bacteria 85085
132 Ga0495583_0004810 3300046506 Bacteria 9468
133 Ga0495628_0021505 3300046516 Bacteria 5305
134 Ga0495630_0033790 3300046517 Bacteria 3814
135 Ga0495648_0074458 3300046524 Bacteria 1956
136 Ga0495668_0013332 3300046616 Bacteria 4854
137 Ga0495634_0073667 3300046642 Bacteria 2245
138 Ga0495625_0004786 3300046660 Bacteria 12658
139 Ga0495670_0000007 3300046691 Bacteria 247088
140 Ga0495686_0000090 3300047472 Bacteria 193179
141 Ga0495686_0035292 3300047472 Bacteria 3215
142 Ga0495686_0062260 3300047472 Bacteria 2315
143 Ga0496104_0006663 3300048907 Bacteria 10165
144 Ga0496106_0010859 3300048909 Bacteria 6729
145 Ga0496111_0056694 3300048914 Bacteria 2835
146 Ga0496116_0000692 3300048919 Bacteria 43664
147 Ga0496116_0012868 3300048919 Bacteria 6797
148 Ga0496116_0060865 3300048919 Bacteria 2447
149 Ga0496117_0057317 3300048920 Bacteria 2706
150 Ga0496117_0078297 3300048920 Bacteria 2183
151 Ga0496118_0049183 3300048921 Bacteria 3249
152 Ga0496118_0107554 3300048921 Bacteria 1862
153 Ga0496119_0005459 3300048922 Bacteria 12172
154 Ga0496119_0067483 3300048922 Bacteria 2109
155 Ga0496121_0000112 3300048924 Bacteria 183480
156 Ga0496121_0089238 3300048924 Bacteria 2414
157 Ga0496122_0015095 3300048925 Bacteria 7409
158 Ga0496122_0079939 3300048925 Bacteria 2282
159 Ga0496123_0042260 3300048926 Bacteria 3148
160 Ga0496124_0019784 3300048927 Bacteria 6249
161 Ga0496124_0062682 3300048927 Bacteria 3110
162 Ga0496125_0035663 3300048928 Bacteria 4357
163 Ga0496126_0058710 3300048929 Bacteria 3467
164 Ga0496126_0084142 3300048929 Bacteria 2806
165 Ga0501034_0201741 3300049571 Bacteria 1947
166 Ga0501037_0189440 3300049573 Bacteria 1457
167 Ga0501038_0087966 3300049574 Bacteria 2608
168 Ga0501047_0091469 3300049581 Bacteria 2921
169 Ga0501047_0199864 3300049581 Bacteria 1860
170 Ga0501080_0189676 3300049742 Bacteria 1889
171 Ga0501035_0171860 3300049822 Bacteria 1872
172 Ga0501044_0214979 3300049823 Bacteria 1875
173 nmdc:mga06z11_5679_c1 3300050494 Bacteria 5027
174 nmdc:mga04h51_2629_c1 3300050495 Bacteria 4276
175 nmdc:mga05p37_1784_c1 3300050507 Bacteria 25122
176 nmdc:mga09592_66871_c1 3300050508 Bacteria 3047
177 nmdc:mga06r32_72734_c1 3300050510 Bacteria 3329
178 nmdc:mga08y16_101957_c1 3300050511 Bacteria 2988
179 Ga0500643_003110 3300053087 Bacteria 8147
180 Ga0500643_008344 3300053087 Bacteria 4075
181 Ga0500644_0005240 3300053088 Bacteria 3266
182 Ga0500646_0019788 3300053090 Bacteria 1783
183 Ga0500583_0000081 3300053092 Bacteria 55682
184 Ga0500650_0047761 3300053098 Bacteria 1985
185 Ga0500595_006304 3300053119 Bacteria 5051
186 Ga0500608_000341 3300053122 Bacteria 18065
187 Ga0500658_0000119 3300053134 Bacteria 37530
188 Ga0500658_0024670 3300053134 Bacteria 2305
189 Ga0500568_0000071 3300053139 Bacteria 99625
190 Ga0500568_0002450 3300053139 Bacteria 10917
191 Ga0500568_0014722 3300053139 Bacteria 3521
192 Ga0500573_0129351 3300053140 Bacteria 1400
193 Ga0500616_0065696 3300053153 Bacteria 1865
194 Ga0500622_0000207 3300053156 Bacteria 62384
195 Ga0500622_0029716 3300053156 Bacteria 2871
196 Ga0500622_0050537 3300053156 Bacteria 2142
197 Ga0501082_0132066 3300060353 Bacteria 2166

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049822 Ga0501035_0171860 Ga0501035_0171860_10_1152 353
2 3300053139 Ga0500568_0002450 Ga0500568_0002450_7305_8582 377
3 3300003775 Ga0055524_1003923 Ga0055524_10039233 381
4 3300053134 Ga0500658_0000119 Ga0500658_0000119_18291_19568 381
5 3300032002 Ga0307416_100226333 Ga0307416_1002263332 390
6 3300053140 Ga0500573_0129351 Ga0500573_0129351_125_1387 390
7 3300053119 Ga0500595_006304 Ga0500595_006304_3110_4393 392
8 3300046524 Ga0495648_0074458 Ga0495648_0074458_620_1894 395
9 3300048924 Ga0496121_0000112 Ga0496121_0000112_125151_126503 396
10 3300049573 Ga0501037_0189440 Ga0501037_0189440_170_1447 398
11 3300005354 Ga0070675_100257235 Ga0070675_1002572351 400
12 3300005365 Ga0070688_100001125 Ga0070688_1000011252 400
13 3300013306 Ga0163162_10412175 Ga0163162_104121751 401
14 3300048914 Ga0496111_0056694 Ga0496111_0056694_1477_2811 401
15 3300053087 Ga0500643_008344 Ga0500643_008344_1484_2764 402
16 iso_pu_bacteria 2821268502 2821268782 403
17 iso_pu_bacteria 2830075706 2830075817 404
18 3300009093 Ga0105240_10000724 Ga0105240_1000072427 405
19 3300025913 Ga0207695_10002442 Ga0207695_1000244216 405
20 3300013296 Ga0157374_10162376 Ga0157374_101623762 406
21 iso_pu_bacteria 2599185354 2600200992 406
22 3300053139 Ga0500568_0000071 Ga0500568_0000071_14535_15959 407
23 3300005327 Ga0070658_10069799 Ga0070658_100697992 408
24 3300025909 Ga0207705_10014837 Ga0207705_100148374 408
25 3300027907 Ga0207428_10089917 Ga0207428_100899172 408
26 3300033180 Ga0307510_10045777 Ga0307510_100457773 408
27 3300005614 Ga0068856_100009297 Ga0068856_1000092974 409
28 3300013104 Ga0157370_10003599 Ga0157370_100035995 409
29 3300013105 Ga0157369_10000607 Ga0157369_1000060725 409
30 3300013307 Ga0157372_10014356 Ga0157372_100143564 409
31 3300026078 Ga0207702_10049600 Ga0207702_100496002 409
32 3300033180 Ga0307510_10046449 Ga0307510_100464492 410
33 3300046506 Ga0495583_0000271 Ga0495583_0000271_83638_84909 410
34 3300046691 Ga0495670_0000007 Ga0495670_0000007_124936_126207 410
35 3300049571 Ga0501034_0201741 Ga0501034_0201741_331_1665 410
36 3300060353 Ga0501082_0132066 Ga0501082_0132066_431_1765 410
37 3300002773 JGI25152J39213_1004925 JGI25152J39213_10049253 411
38 3300002987 JGI25159J45721_1000101 JGI25159J45721_10001013 411
39 3300003215 JGI25153J46596_10020146 JGI25153J46596_100201462 411
40 3300003374 JGI25161J50226_1000085 JGI25161J50226_100008526 411
41 3300003790 Ga0055528_1002942 Ga0055528_10029428 411
42 3300004625 Ga0055543_1000036 Ga0055543_1000036100 411
43 3300025208 Ga0209436_100133 Ga0209436_10013311 411
44 3300025284 Ga0209130_1000019 Ga0209130_1000019293 411
45 3300025295 Ga0209564_1003025 Ga0209564_100302510 411
46 3300025297 Ga0209758_1004715 Ga0209758_100471513 411
47 3300025299 Ga0209256_1003916 Ga0209256_10039165 411
48 3300025302 Ga0207426_1000005 Ga0207426_1000005315 411
49 3300041413 Ga0439465_0007152 Ga0439465_0007152_718_2052 411
50 3300053122 Ga0500608_000341 Ga0500608_000341_14152_15432 411
51 iso_pu_bacteria 8054302542 8054304527 411
52 3300009551 Ga0105238_10328103 Ga0105238_103281031 412
53 3300013307 Ga0157372_10269575 Ga0157372_102695752 412
54 3300025949 Ga0207667_10261993 Ga0207667_102619932 412
55 3300026067 Ga0207678_10001823 Ga0207678_1000182313 412
56 3300031456 Ga0307513_10073843 Ga0307513_100738433 412
57 3300033180 Ga0307510_10000118 Ga0307510_1000011839 412
58 3300046506 Ga0495583_0004810 Ga0495583_0004810_2940_4217 412
59 3300046616 Ga0495668_0013332 Ga0495668_0013332_1884_3161 412
60 3300046660 Ga0495625_0004786 Ga0495625_0004786_11232_12509 412
61 3300053087 Ga0500643_003110 Ga0500643_003110_5804_7081 412
62 3300053090 Ga0500646_0019788 Ga0500646_0019788_427_1761 412
63 3300009093 Ga0105240_10002365 Ga0105240_100023657 413
64 3300009094 Ga0111539_10025826 Ga0111539_100258263 413
65 3300025913 Ga0207695_10002476 Ga0207695_100024767 413
66 3300025914 Ga0207671_10004737 Ga0207671_100047373 413
67 3300041404 Ga0439436_0020082 Ga0439436_0020082_195_1475 413
68 3300041410 Ga0439461_0002780 Ga0439461_0002780_251_1531 413
69 3300041413 Ga0439465_0002831 Ga0439465_0002831_3704_4984 413
70 3300041997 Ga0439431_0012599 Ga0439431_0012599_554_1834 413
71 3300042015 Ga0439462_0000755 Ga0439462_0000755_1760_3040 413
72 3300047472 Ga0495686_0000090 Ga0495686_0000090_101360_102697 413
73 3300050511 nmdc:mga08y16_101957_c1 nmdc:mga08y16_101957_c1_1507_2796 413
74 3300006847 Ga0075431_100013063 Ga0075431_1000130634 414
75 3300036401 Ga0373937_0040636 Ga0373937_0040636_1419_2708 414
76 3300037418 Ga0395900_0008958 Ga0395900_0008958_277_1608 414
77 3300046516 Ga0495628_0021505 Ga0495628_0021505_299_1588 414
78 3300046517 Ga0495630_0033790 Ga0495630_0033790_888_2177 414
79 3300046642 Ga0495634_0073667 Ga0495634_0073667_240_1529 414
80 3300050510 nmdc:mga06r32_72734_c1 nmdc:mga06r32_72734_c1_461_1747 414
81 3300009093 Ga0105240_10000025 Ga0105240_10000025239 415
82 3300025913 Ga0207695_10000025 Ga0207695_10000025258 415
83 3300005530 Ga0070679_100064104 Ga0070679_1000641043 416
84 3300025921 Ga0207652_10014041 Ga0207652_100140413 416
85 3300027866 Ga0209813_10000628 Ga0209813_100006285 416
86 3300048924 Ga0496121_0089238 Ga0496121_0089238_601_1935 416
87 3300048927 Ga0496124_0062682 Ga0496124_0062682_1427_2761 416
88 3300049581 Ga0501047_0199864 Ga0501047_0199864_139_1434 416
89 3300050494 nmdc:mga06z11_5679_c1 nmdc:mga06z11_5679_c1_3381_4700 416
90 3300053156 Ga0500622_0000207 Ga0500622_0000207_60649_61983 416
91 3300049574 Ga0501038_0087966 Ga0501038_0087966_527_1861 417
92 3300049581 Ga0501047_0091469 Ga0501047_0091469_324_1658 417
93 3300049742 Ga0501080_0189676 Ga0501080_0189676_170_1504 417
94 3300049823 Ga0501044_0214979 Ga0501044_0214979_170_1504 417
95 3300050508 nmdc:mga09592_66871_c1 nmdc:mga09592_66871_c1_1693_3012 417
96 3300005329 Ga0070683_100001032 Ga0070683_1000010328 418
97 3300005335 Ga0070666_10172959 Ga0070666_101729591 418
98 3300005336 Ga0070680_100002320 Ga0070680_1000023206 418
99 3300005339 Ga0070660_100003490 Ga0070660_1000034909 418
100 3300005347 Ga0070668_100076237 Ga0070668_1000762373 418
101 3300005366 Ga0070659_100003614 Ga0070659_1000036146 418
102 3300005530 Ga0070679_100006562 Ga0070679_10000656210 418
103 3300005539 Ga0068853_100015823 Ga0068853_1000158233 418
104 3300005563 Ga0068855_100039182 Ga0068855_1000391822 418
105 3300005577 Ga0068857_100021699 Ga0068857_1000216992 418
106 3300005578 Ga0068854_100012764 Ga0068854_1000127642 418
107 3300009093 Ga0105240_10018533 Ga0105240_100185335 418
108 3300009551 Ga0105238_10037023 Ga0105238_100370232 418
109 3300013104 Ga0157370_10006854 Ga0157370_100068546 418
110 3300013307 Ga0157372_10014241 Ga0157372_100142412 418
111 3300025904 Ga0207647_10000821 Ga0207647_100008218 418
112 3300025909 Ga0207705_10001870 Ga0207705_100018703 418
113 3300025912 Ga0207707_10008624 Ga0207707_100086247 418
114 3300025917 Ga0207660_10040268 Ga0207660_100402683 418
115 3300025919 Ga0207657_10001250 Ga0207657_1000125013 418
116 3300025920 Ga0207649_10012685 Ga0207649_100126855 418
117 3300025924 Ga0207694_10023561 Ga0207694_100235612 418
118 3300025949 Ga0207667_10006891 Ga0207667_1000689111 418
119 3300025981 Ga0207640_10008580 Ga0207640_100085805 418
120 3300026067 Ga0207678_10001283 Ga0207678_100012836 418
121 3300026116 Ga0207674_10002524 Ga0207674_1000252416 418
122 3300039437 Ga0436365_0282637 Ga0436365_0282637_1292_2680 418
123 3300039450 Ga0436363_0709121 Ga0436363_0709121_2259_3644 418
124 3300048907 Ga0496104_0006663 Ga0496104_0006663_3549_4883 418
125 3300048920 Ga0496117_0078297 Ga0496117_0078297_316_1650 418
126 3300048921 Ga0496118_0107554 Ga0496118_0107554_179_1513 418
127 3300048922 Ga0496119_0005459 Ga0496119_0005459_733_2067 418
128 3300048925 Ga0496122_0079939 Ga0496122_0079939_366_1700 418
129 3300048926 Ga0496123_0042260 Ga0496123_0042260_378_1712 418
130 3300048928 Ga0496125_0035663 Ga0496125_0035663_1522_2856 418
131 iso_pu_bacteria 2919425241 2919427656 418
132 3300005347 Ga0070668_100041352 Ga0070668_1000413522 419
133 3300009147 Ga0114129_10000792 Ga0114129_1000079212 419
134 3300037312 Ga0395899_0000004 Ga0395899_0000004_113728_115035 419
135 3300038443 Ga0395901_0127945 Ga0395901_0127945_391_1698 419
136 3300041507 Ga0451851_0326788 Ga0451851_0326788_342_1676 419
137 3300050507 nmdc:mga05p37_1784_c1 nmdc:mga05p37_1784_c1_4565_5893 419
138 iso_pu_bacteria 2818991459 2819669639 419
139 iso_pu_bacteria 2904755435 2904760669 419
140 3300006178 Ga0075367_10080758 Ga0075367_100807581 420
141 3300013104 Ga0157370_10179448 Ga0157370_101794482 420
142 3300026089 Ga0207648_10012385 Ga0207648_100123854 420
143 3300003323 rootH1_10008837 rootH1_1000883715 421
144 3300006844 Ga0075428_100016804 Ga0075428_1000168044 421
145 3300028794 Ga0307515_10000112 Ga0307515_10000112189 421
146 3300041512 Ga0451853_3216054 Ga0451853_3216054_23_1360 421
147 3300044658 Ga0466972_0012187 Ga0466972_0012187_719_2050 421
148 3300053092 Ga0500583_0000081 Ga0500583_0000081_16940_18274 421
149 3300053098 Ga0500650_0047761 Ga0500650_0047761_392_1729 421
150 3300053153 Ga0500616_0065696 Ga0500616_0065696_60_1391 421
151 3300053156 Ga0500622_0050537 Ga0500622_0050537_680_2017 421
152 iso_pu_bacteria 2738541278 2738729900 421
153 3300002987 JGI25159J45721_1000036 JGI25159J45721_100003639 422
154 3300003354 JGI25160J50197_1000060 JGI25160J50197_100006040 422
155 3300003374 JGI25161J50226_1000486 JGI25161J50226_10004869 422
156 3300004625 Ga0055543_1000478 Ga0055543_10004787 422
157 3300005262 Ga0065165_1000160 Ga0065165_100016092 422
158 3300025208 Ga0209436_103973 Ga0209436_1039733 422
159 3300025229 Ga0209147_105750 Ga0209147_1057502 422
160 3300025284 Ga0209130_1000136 Ga0209130_100013681 422
161 3300025302 Ga0207426_1000253 Ga0207426_100025381 422
162 3300044842 Ga0466957_0010144 Ga0466957_0010144_3017_4351 422
163 iso_pu_bacteria 2971410472 2971416852 423
164 3300048919 Ga0496116_0060865 Ga0496116_0060865_839_2236 424
165 iso_pu_bacteria 2904755435 2904756508 424
166 3300048919 Ga0496116_0012868 Ga0496116_0012868_5002_6441 425
167 3300005617 Ga0068859_100024141 Ga0068859_1000241412 426
168 3300006048 Ga0075363_100024168 Ga0075363_1000241682 426
169 3300006931 Ga0097620_100024141 Ga0097620_1000241414 426
170 3300050495 nmdc:mga04h51_2629_c1 nmdc:mga04h51_2629_c1_2831_4150 426
171 iso_pu_bacteria 2889790730 2889794634 426
172 iso_pu_bacteria 2904113452 2904116268 426
173 3300037312 Ga0395899_0008644 Ga0395899_0008644_6314_7738 427
174 3300046460 Ga0495638_0003797 Ga0495638_0003797_10284_11600 427
175 3300053088 Ga0500644_0005240 Ga0500644_0005240_1050_2366 427
176 3300053156 Ga0500622_0029716 Ga0500622_0029716_1493_2809 427
177 iso_pu_bacteria 2791355253 2793280422 427
178 iso_pu_bacteria 2909042592 2909045430 427
179 iso_pu_bacteria 2919425241 2919425689 427
180 iso_pu_bacteria 8054795415 8054799925 427
181 3300037312 Ga0395899_0021724 Ga0395899_0021724_2097_3590 428
182 iso_pu_bacteria 2510917022 2511135543 428
183 iso_pu_bacteria 2529292951 2530648507 428
184 iso_pu_bacteria 2582581294 2585200687 428
185 iso_pu_bacteria 2582581307 2585272618 428
186 iso_pu_bacteria 2585427531 2585562286 428
187 iso_pu_bacteria 2585427609 2585906547 428
188 iso_pu_bacteria 2585428059 2587738830 428
189 iso_pu_bacteria 2585428125 2587981969 428
190 iso_pu_bacteria 2643221599 2644003977 428
191 iso_pu_bacteria 2643221676 2644421594 428
192 iso_pu_bacteria 3005452660 3005458524 428
193 3300003187 JGI25151J46595_10021223 JGI25151J46595_100212232 429
194 3300005340 Ga0070689_100069051 Ga0070689_1000690512 429
195 3300025246 Ga0209646_1002525 Ga0209646_10025253 429
196 3300025258 Ga0209129_1005510 Ga0209129_10055102 429
197 3300025294 Ga0209025_1002615 Ga0209025_10026152 429
198 3300025297 Ga0209758_1001643 Ga0209758_10016434 429
199 3300025297 Ga0209758_1001926 Ga0209758_10019264 429
200 3300047472 Ga0495686_0062260 Ga0495686_0062260_679_2013 429
201 3300048909 Ga0496106_0010859 Ga0496106_0010859_1450_2784 429
202 3300048927 Ga0496124_0019784 Ga0496124_0019784_4229_5620 429
203 3300053134 Ga0500658_0024670 Ga0500658_0024670_548_1882 429
204 3300053139 Ga0500568_0014722 Ga0500568_0014722_691_2025 429
205 iso_pu_bacteria 2510917030 2511197366 429
206 iso_pu_bacteria 2513237146 2513923740 429
207 iso_pu_bacteria 2582581298 2585226823 429
208 iso_pu_bacteria 2585427594 2585842651 429
209 iso_pu_bacteria 2593339198 2595320122 429
210 iso_pu_bacteria 2617270742 2617385583 429
211 iso_pu_bacteria 2818991459 2819671264 429
212 iso_pu_bacteria 2933016740 2933017723 429
213 iso_pu_bacteria 2971410472 2971413869 429
214 iso_pu_bacteria 2989771324 2989772890 429
215 iso_pu_bacteria 3003930520 3003931814 429
216 iso_pu_bacteria 8002317523 8002319757 429
217 iso_pu_bacteria 2512564039 2512733655 430
218 3300009545 Ga0105237_10338551 Ga0105237_103385511 431
219 3300048929 Ga0496126_0058710 Ga0496126_0058710_1327_2655 431
220 iso_pu_bacteria 2842285085 2842287873 431
221 iso_pu_bacteria 2842402390 2842405139 431
222 iso_pu_bacteria 2842409023 2842412104 431
223 iso_pu_bacteria 2842415677 2842418369 431
224 iso_pu_bacteria 2904113452 2904116879 431
225 iso_pu_bacteria 3005445848 3005452028 431
226 iso_pu_bacteria 8046991243 8046999081 431
227 iso_pu_bacteria 2582581306 2585270260 432
228 iso_pu_bacteria 8054558443 8054560421 432
229 3300002773 JGI25152J39213_1000465 JGI25152J39213_100046520 433
230 3300002773 JGI25152J39213_1000472 JGI25152J39213_10004726 433
231 3300002774 JGI25150J39212_1000219 JGI25150J39212_100021920 433
232 3300003187 JGI25151J46595_10000007 JGI25151J46595_10000007144 433
233 3300003215 JGI25153J46596_10000254 JGI25153J46596_1000025428 433
234 3300025245 Ga0207425_1000018 Ga0207425_1000018187 433
235 3300025258 Ga0209129_1000026 Ga0209129_1000026142 433
236 3300025294 Ga0209025_1000035 Ga0209025_1000035142 433
237 3300025297 Ga0209758_1000040 Ga0209758_1000040142 433
238 3300031731 Ga0307405_10008618 Ga0307405_100086182 433
239 3300031911 Ga0307412_10013437 Ga0307412_100134373 433
240 3300047472 Ga0495686_0035292 Ga0495686_0035292_150_1484 433
241 3300048919 Ga0496116_0000692 Ga0496116_0000692_40994_42328 433
242 3300048920 Ga0496117_0057317 Ga0496117_0057317_807_2141 433
243 3300048921 Ga0496118_0049183 Ga0496118_0049183_620_1954 433
244 3300048922 Ga0496119_0067483 Ga0496119_0067483_377_1711 433
245 3300048925 Ga0496122_0015095 Ga0496122_0015095_4857_6191 433
246 3300048929 Ga0496126_0084142 Ga0496126_0084142_979_2313 433

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07005

SBD_N

Sugar-binding N-terminal domain

59

301

0.94

PF17042

NBD_C

Nucleotide-binding C-terminal domain

328

501

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5dmh-assembly1.cif.gz_A crystal structure of a domain of unknown function (duf1537) from ralstonia eutropha h16 (h16_a1561), target efi-511666, complex with adp. 0.8322 3 431
5dmh-assembly1.cif.gz_A crystal structure of a domain of unknown function (duf1537) from ralstonia eutropha h16 (h16_a1561), target efi-511666, complex with adp. 0.8304 3 431
3dqq-assembly2.cif.gz_B the crystal structure of the putative trna synthase from salmonella typhimurium lt2 0.8081 6 426
5dmh-assembly2.cif.gz_B crystal structure of a domain of unknown function (duf1537) from ralstonia eutropha h16 (h16_a1561), target efi-511666, complex with adp. 0.8069 3 431
5dmh-assembly2.cif.gz_B crystal structure of a domain of unknown function (duf1537) from ralstonia eutropha h16 (h16_a1561), target efi-511666, complex with adp. 0.8051 3 431
ID Description Score Start End Superfamily
5dmhB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Putative sugar-binding, N-terminal domain 0.8558 3 244 3.40.50.10840
5dmhB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Putative sugar-binding, N-terminal domain 0.8523 3 244 3.40.50.10840
5dmhA02 Alpha Beta;3-Layer(aba) Sandwich;Molybdenum Cofactor Biosythetic Enzyme; Chain A;Four-carbon acid sugar kinase, nucleotide binding domain 0.8183 251 431 3.40.980.20
5dmhA02 Alpha Beta;3-Layer(aba) Sandwich;Molybdenum Cofactor Biosythetic Enzyme; Chain A;Four-carbon acid sugar kinase, nucleotide binding domain 0.8016 251 431 3.40.980.20
af_A0A1D6LWN3_692_931_3.40.50.10840 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Putative sugar-binding, N-terminal domain 0.7754 6 231 3.40.50.10840
ID Description Score Start End GO Terms
AF-A0A530K1H9-F1-model_v4 Four-carbon acid sugar kinase family protein 0.9884 353 428 GO:0016301
AF-A0A529LL05-F1-model_v4 Four-carbon acid sugar kinase family protein 0.9876 1 146 GO:0016301
AF-A0A436FSH3-F1-model_v4 deleted 0.9866 275 433
AF-A0A3S1TLC4-F1-model_v4 deleted 0.9866 340 433
AF-A0A6L9UKV5-F1-model_v4 Four-carbon acid sugar kinase family protein 0.9863 1 433 GO:0005524
GO:0016301

Feature Viewer

pLDDT pTM Quality
93.18 0.91 High
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Predicted Structure (AlphaFold2)

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