F358572

General Info

Members Datasets Scaffolds Average Seq Length
246 189 218 724

Family's Representative Sequence

Representative Sequence 3300053730|Ga0500645_003314|Ga0500645_003314_3215_5608
Length 797
Sequence MVVSLKAAEKTAADENEGNPTVAPQGPDTGALAALCAIARFHQVAADPATLAHQLGLQPSEAVSANDLLRAARHLGLKAKISSTTVERLQLTPLPALAMVRGEDGQVRAVFMAQCDGQRVLIQDFAAASSRPTIESVKVFADQWTGELILVTSHASLAGELAKFDFSWFVPALVKYRKLLGEVLLISFMLQLFALVSPLFFQVVMDKVLVHKGLTTLDVLVIGLVVVVMFESLLNGLRAYVFSHTTSRIDVELGARLFRHLVQLPLAYFQARRVGDSVARVRELENIRSFLTGNALTVVLDVLFSVIFIAVMLFYSVPLTLIVLVSLPLYFGLSLAVVPILRQRLDVKFARGAENQSMLVETITGIQTVKASALEPSFGKRWDNQLAAYVSASFKTQNLATWAHEGINLIGKLVNAATLWYGAHLVMNNELSVGQFVAFNMFAQRVAQPIMRMAQLWTDFQQTGISVARLGDILNTRTEVPPTSAAQLPPIKGRITLDSVVFRYRPEAPPVLHGISLDVKPGEIIGIVGRSGSGKSTLTKLVQRLYSPEGGRLLVDGIDISLIDAAQLRRQVGVVLQENLLFNRSVRENIAITDPAAPIEAVVRVAQLAGAHEFISELPEGYDTHVGEQGSSLSGGQRQRIAIARALFTNPRILIFDEATSALDYESEAIIQRNMAHICKGRTVLIIAHRLSAVRHAHRIIVMDKGKIVEAGPHDALVQKPQGLYAHRHCSVDGQPYPVRQRGKSDAHRNIGDRWSRQWAQQCHHGQLGIQHLAWPWRQRHAPGKRFRRHAGGRGRQ

Samples

Sample ID Description Type Environment
1 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
2 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
3 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
4 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
5 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
6 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
7 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
8 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
9 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
10 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
11 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
12 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
13 2831864461 Roseateles noduli HZ7 Isolate Nodule
14 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
15 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
16 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
17 2885198086 Variovorax sp. 679 Isolate Unclassified
18 2885211737 Variovorax sp. 553 Isolate Unclassified
19 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
20 2928051484 Variovorax sp. 1133 Isolate Unclassified
21 2928070936 Variovorax gossypii 1167 Isolate Unclassified
22 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
23 2929520902 Variovorax beijingensis 502 Isolate Unclassified
24 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
25 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
26 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
27 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
28 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
29 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
30 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
31 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
32 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
33 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
34 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
35 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
36 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
37 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
38 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
39 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
40 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
41 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
42 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
43 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
44 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
45 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
53 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
54 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
55 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
75 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
78 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
83 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
86 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
108 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
109 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
110 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
111 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
112 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
113 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
114 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
115 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
116 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
117 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
118 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
119 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
125 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
126 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
127 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
128 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
129 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
130 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
131 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
132 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
133 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
134 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
135 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
138 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
139 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
140 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
141 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
142 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
143 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
144 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
145 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
146 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
147 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
148 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
149 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
152 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
153 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
154 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
155 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
156 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
157 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
158 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
159 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
163 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
164 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
167 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
168 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
169 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
170 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
171 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
172 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
173 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
174 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
175 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
176 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
177 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
178 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
179 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
180 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
181 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
182 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
183 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
186 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
187 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
188 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
189 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.62
Metatranscriptomes 0
Isolates 11.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.83
Nodule 2.03
Rhizoplane 2.03
Rhizosphere 53.66
Stem 0
Stem Tuber 0
Unclassified 15.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1006488 3300002773 Bacteria 3174
2 rootH1_10000852 3300003323 Bacteria 55220
3 rootH1_10004143 3300003323 Bacteria 17742
4 Ga0055539_1000160 3300003752 Bacteria 63531
5 Ga0055533_1000162 3300003756 Bacteria 63221
6 Ga0055525_1000912 3300003759 Bacteria 8374
7 Ga0055531_10000282 3300003794 Bacteria 51863
8 Ga0055531_10001183 3300003794 Bacteria 20052
9 Ga0055531_10004041 3300003794 Bacteria 9099
10 Ga0055531_10004784 3300003794 Bacteria 8092
11 Ga0055543_1002908 3300004625 Bacteria 5368
12 Ga0065165_1000151 3300005262 Bacteria 120917
13 Ga0065165_1000707 3300005262 Bacteria 47352
14 Ga0070670_100006017 3300005331 Bacteria 10258
15 Ga0070670_100050043 3300005331 Bacteria 3591
16 Ga0070675_100038311 3300005354 Bacteria 3906
17 Ga0070671_100006099 3300005355 Bacteria 9604
18 Ga0070674_100006106 3300005356 Bacteria 7002
19 Ga0070674_100046270 3300005356 Bacteria 2976
20 Ga0070673_100006812 3300005364 Bacteria 7464
21 Ga0070713_100039736 3300005436 Bacteria 3821
22 Ga0070663_100041878 3300005455 Bacteria 3215
23 Ga0070678_100020728 3300005456 Bacteria 4319
24 Ga0070678_100022001 3300005456 Bacteria 4215
25 Ga0070662_100052581 3300005457 Bacteria 2945
26 Ga0068867_100000016 3300005459 Bacteria 108420
27 Ga0070706_100002046 3300005467 Bacteria 20665
28 Ga0070672_100007253 3300005543 Bacteria 7510
29 Ga0068855_100000148 3300005563 Bacteria 89300
30 Ga0068855_100025385 3300005563 Bacteria 7090
31 Ga0068855_100042060 3300005563 Bacteria 5415
32 Ga0068854_100000054 3300005578 Bacteria 84435
33 Ga0068852_100029928 3300005616 Bacteria 4477
34 Ga0068861_100009002 3300005719 Bacteria 6882
35 Ga0068858_100050098 3300005842 Bacteria 3865
36 Ga0068860_100101376 3300005843 Bacteria 2747
37 Ga0075366_10017508 3300006195 Bacteria 4123
38 Ga0075370_10000539 3300006353 Bacteria 14505
39 Ga0099823_1008208 3300006944 Bacteria 10624
40 Ga0105244_10026806 3300009036 Bacteria 3115
41 Ga0105240_10006201 3300009093 Bacteria 17602
42 Ga0105240_10026261 3300009093 Bacteria 7639
43 Ga0105243_10000681 3300009148 Bacteria 33167
44 Ga0105243_10030470 3300009148 Bacteria 4153
45 Ga0105237_10016634 3300009545 Bacteria 7639
46 Ga0105239_10018775 3300010375 Bacteria 7639
47 Ga0157319_1000017 3300012497 Bacteria 110340
48 Ga0157369_10001906 3300013105 Bacteria 25152
49 Ga0157374_10104745 3300013296 Bacteria 2716
50 Ga0163162_10000537 3300013306 Bacteria 35111
51 Ga0157375_10013564 3300013308 Bacteria 7256
52 Ga0157380_10005378 3300014326 Bacteria 8949
53 Ga0157377_10000006 3300014745 Bacteria 419853
54 Ga0157379_10004382 3300014968 Bacteria 12080
55 Ga0157376_10013457 3300014969 Bacteria 6104
56 Ga0213872_10000154 3300021361 Bacteria 63158
57 Ga0209674_100003 3300025226 Bacteria 2196646
58 Ga0209563_100217 3300025230 Bacteria 29550
59 Ga0209677_100107 3300025253 Bacteria 89035
60 Ga0209148_1001146 3300025254 Bacteria 15438
61 Ga0209129_1001594 3300025258 Bacteria 12373
62 Ga0209129_1004295 3300025258 Bacteria 5659
63 Ga0209565_1000785 3300025263 Bacteria 18441
64 Ga0209565_1002190 3300025263 Bacteria 7339
65 Ga0209565_1005111 3300025263 Bacteria 3859
66 Ga0209673_1000089 3300025273 Bacteria 202240
67 Ga0209673_1003801 3300025273 Bacteria 8566
68 Ga0209673_1009743 3300025273 Bacteria 4124
69 Ga0209130_1003973 3300025284 Bacteria 5907
70 Ga0209675_1000354 3300025291 Bacteria 39738
71 Ga0209675_1001120 3300025291 Bacteria 16341
72 Ga0209675_1005872 3300025291 Bacteria 5040
73 Ga0209676_1004406 3300025292 Bacteria 7858
74 Ga0209025_1001630 3300025294 Bacteria 27920
75 Ga0209025_1007740 3300025294 Bacteria 7919
76 Ga0209025_1011243 3300025294 Bacteria 5929
77 Ga0209564_1000005 3300025295 Bacteria 1147192
78 Ga0209564_1000478 3300025295 Bacteria 66586
79 Ga0209564_1001206 3300025295 Bacteria 29513
80 Ga0209564_1002924 3300025295 Bacteria 12417
81 Ga0209758_1000650 3300025297 Bacteria 52689
82 Ga0209050_1000178 3300025298 Bacteria 145314
83 Ga0209256_1000630 3300025299 Bacteria 48400
84 Ga0209256_1000973 3300025299 Bacteria 34412
85 Ga0209256_1003606 3300025299 Bacteria 10640
86 Ga0207426_1000584 3300025302 Bacteria 48547
87 Ga0207426_1000835 3300025302 Bacteria 32700
88 Ga0209051_1000306 3300025303 Bacteria 77135
89 Ga0209051_1004905 3300025303 Bacteria 8015
90 Ga0209051_1005214 3300025303 Bacteria 7675
91 Ga0209257_1000015 3300025304 Bacteria 908141
92 Ga0209257_1000022 3300025304 Bacteria 765258
93 Ga0209257_1001373 3300025304 Bacteria 29347
94 Ga0207684_10002700 3300025910 Bacteria 17722
95 Ga0207695_10007826 3300025913 Bacteria 13519
96 Ga0207695_10045440 3300025913 Bacteria 4661
97 Ga0207659_10032773 3300025926 Bacteria 3570
98 Ga0207700_10029498 3300025928 Bacteria 3872
99 Ga0207644_10003391 3300025931 Bacteria 10281
100 Ga0207706_10000280 3300025933 Bacteria 55678
101 Ga0207709_10000857 3300025935 Bacteria 23261
102 Ga0207691_10009513 3300025940 Bacteria 9333
103 Ga0207691_10028167 3300025940 Bacteria 5262
104 Ga0207667_10000062 3300025949 Bacteria 190422
105 Ga0207667_10033709 3300025949 Bacteria 5504
106 Ga0207640_10000022 3300025981 Bacteria 167526
107 Ga0207658_10024958 3300025986 Bacteria 4183
108 Ga0207678_10008699 3300026067 Bacteria 8937
109 Ga0207648_10000023 3300026089 Bacteria 134519
110 Ga0207676_10045649 3300026095 Bacteria 3387
111 Ga0207675_100024352 3300026118 Bacteria 5629
112 Ga0207683_10013639 3300026121 Bacteria 6932
113 Ga0207698_10034685 3300026142 Bacteria 3681
114 Ga0268266_10034261 3300028379 Bacteria 4319
115 Ga0268264_10064865 3300028381 Bacteria 3075
116 Ga0307515_10000585 3300028794 Bacteria 85580
117 Ga0307515_10004238 3300028794 Bacteria 29780
118 Ga0307515_10009270 3300028794 Bacteria 19049
119 Ga0307515_10011679 3300028794 Bacteria 16633
120 Ga0307515_10021749 3300028794 Bacteria 11347
121 Ga0307515_10090229 3300028794 Bacteria 3847
122 Ga0265328_10008244 3300031239 Bacteria 4309
123 Ga0265327_10000877 3300031251 Bacteria 44444
124 Ga0307513_10000020 3300031456 Bacteria 228745
125 Ga0307513_10026816 3300031456 Bacteria 6628
126 Ga0307513_10029761 3300031456 Bacteria 6217
127 Ga0307509_10004444 3300031507 Bacteria 20215
128 Ga0307408_100024651 3300031548 Bacteria 4111
129 Ga0307508_10068987 3300031616 Bacteria 3105
130 Ga0307514_10001218 3300031649 Bacteria 34108
131 Ga0307516_10000428 3300031730 Bacteria 55216
132 Ga0307516_10011540 3300031730 Bacteria 9588
133 Ga0307516_10022529 3300031730 Bacteria 6466
134 Ga0307405_10003104 3300031731 Bacteria 7543
135 Ga0307518_10034511 3300031838 Bacteria 3672
136 Ga0307411_10003487 3300032005 Bacteria 7305
137 Ga0307510_10063666 3300033180 Bacteria 3753
138 Ga0307510_10074361 3300033180 Bacteria 3357
139 Ga0373937_0015632 3300036401 Bacteria 6719
140 Ga0395900_0000054 3300037418 Bacteria 220487
141 Ga0395905_0000811 3300037471 Bacteria 41049
142 Ga0395905_0021289 3300037471 Bacteria 6135
143 Ga0395901_0077660 3300038443 Bacteria 3466
144 Ga0436361_0530495 3300039447 Bacteria 101563
145 Ga0436361_0667541 3300039447 Bacteria 5717
146 Ga0439436_0000596 3300041404 Bacteria 9592
147 Ga0439466_0001524 3300041411 Bacteria 9048
148 Ga0439431_0005558 3300041997 Bacteria 2780
149 Ga0439433_0000481 3300041999 Bacteria 7386
150 Ga0439445_0000480 3300042004 Bacteria 8110
151 Ga0439432_001636 3300042006 Bacteria 8389
152 Ga0439449_0000760 3300042007 Bacteria 12376
153 Ga0439454_000517 3300042011 Bacteria 3136
154 Ga0439462_0001640 3300042015 Bacteria 5031
155 Ga0439434_0005062 3300042435 Bacteria 3853
156 Ga0439459_0001537 3300042438 Bacteria 3425
157 Ga0451577_0006049 3300042876 Bacteria 12172
158 Ga0466972_0004483 3300044658 Bacteria 6985
159 Ga0466965_0005243 3300044683 Bacteria 5826
160 Ga0466966_0000511 3300044684 Bacteria 24728
161 Ga0466966_0002155 3300044684 Bacteria 12769
162 Ga0466963_0026916 3300044694 Bacteria 3679
163 Ga0453684_0038486 3300044712 Bacteria 6538
164 Ga0453684_0133430 3300044712 Bacteria 2976
165 Ga0466957_0002152 3300044842 Bacteria 10546
166 Ga0466959_0000103 3300045049 Bacteria 54729
167 Ga0466959_0082757 3300045049 Bacteria 2312
168 Ga0451576_0008423 3300045051 Bacteria 12104
169 Ga0451576_0040233 3300045051 Bacteria 4949
170 Ga0451576_0045455 3300045051 Bacteria 4625
171 Ga0466958_0008973 3300045836 Bacteria 5554
172 Ga0495617_000473 3300046452 Bacteria 21448
173 Ga0495629_0043125 3300046459 Bacteria 3168
174 Ga0495607_0000039 3300046501 Bacteria 133875
175 Ga0495616_0000810 3300046513 Bacteria 22836
176 Ga0495616_0001667 3300046513 Bacteria 15174
177 Ga0495625_0028951 3300046660 Bacteria 4147
178 Ga0495647_0002223 3300046681 Bacteria 6076
179 Ga0495670_0012102 3300046691 Bacteria 4245
180 Ga0495671_0000113 3300046692 Bacteria 72284
181 Ga0495660_0000066 3300046810 Bacteria 119694
182 Ga0495672_0000013 3300047320 Bacteria 511827
183 Ga0495683_0000129 3300047323 Bacteria 75590
184 Ga0495687_001671 3300047443 Bacteria 19849
185 Ga0495679_000019 3300047446 Bacteria 231072
186 Ga0495686_0000019 3300047472 Bacteria 434054
187 Ga0496109_0015599 3300048912 Bacteria 6627
188 Ga0496112_0118357 3300048915 Bacteria 2619
189 Ga0496116_0005929 3300048919 Bacteria 11206
190 Ga0496117_0091473 3300048920 Bacteria 1957
191 Ga0496118_0020765 3300048921 Bacteria 5814
192 Ga0496121_0011396 3300048924 Bacteria 9881
193 Ga0496121_0012591 3300048924 Bacteria 9195
194 Ga0496124_0000386 3300048927 Bacteria 80557
195 Ga0496124_0090213 3300048927 Bacteria 2501
196 Ga0496125_0020544 3300048928 Bacteria 6196
197 Ga0501202_002617 3300049652 Bacteria 3034
198 Ga0501235_004331 3300049669 Bacteria 3074
199 Ga0501253_000228 3300049683 Bacteria 4310
200 Ga0501229_000303 3300049706 Bacteria 5547
201 Ga0501262_000389 3300049759 Bacteria 5362
202 nmdc:mga0k408_12064_c1 3300050493 Bacteria 4718
203 nmdc:mga0k408_6760_c1 3300050493 Bacteria 6118
204 nmdc:mga07m45_2343_c1 3300050496 Bacteria 8886
205 nmdc:mga07m45_41642_c1 3300050496 Bacteria 2573
206 Ga0495601_0017345 3300053077 Bacteria 4369
207 Ga0500610_0000151 3300053079 Bacteria 20751
208 Ga0500643_000020 3300053087 Bacteria 290328
209 Ga0500644_0001459 3300053088 Bacteria 6239
210 Ga0500593_000170 3300053117 Bacteria 26287
211 Ga0500607_003097 3300053121 Bacteria 12483
212 Ga0500608_004341 3300053122 Bacteria 5474
213 Ga0500618_000389 3300053125 Bacteria 30138
214 Ga0500658_0000962 3300053134 Bacteria 11761
215 Ga0500616_0002477 3300053153 Bacteria 15324
216 Ga0500619_000215 3300053154 Bacteria 13255
217 Ga0500645_003314 3300053730 Bacteria 6617
218 Ga0466962_0000636 3300061719 Bacteria 15609

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2816332253 2817262738 622
2 3300048920 Ga0496117_0091473 Ga0496117_0091473_23_1939 629
3 3300021361 Ga0213872_10000154 Ga0213872_1000015459 635
4 3300039447 Ga0436361_0530495 Ga0436361_0530495_39932_41890 644
5 3300028794 Ga0307515_10011679 Ga0307515_1001167914 645
6 3300053121 Ga0500607_003097 Ga0500607_003097_1052_3256 656
7 3300025291 Ga0209675_1000354 Ga0209675_10003542 661
8 3300026095 Ga0207676_10045649 Ga0207676_100456492 677
9 3300048924 Ga0496121_0012591 Ga0496121_0012591_2671_4854 678
10 3300048927 Ga0496124_0090213 Ga0496124_0090213_379_2490 679
11 3300025940 Ga0207691_10009513 Ga0207691_100095134 681
12 3300049652 Ga0501202_002617 Ga0501202_002617_866_2941 682
13 3300050493 nmdc:mga0k408_12064_c1 nmdc:mga0k408_12064_c1_653_2770 682
14 3300028794 Ga0307515_10000585 Ga0307515_1000058528 683
15 3300048912 Ga0496109_0015599 Ga0496109_0015599_3070_5160 684
16 3300049669 Ga0501235_004331 Ga0501235_004331_371_2452 684
17 3300049683 Ga0501253_000228 Ga0501253_000228_849_2930 684
18 3300049706 Ga0501229_000303 Ga0501229_000303_661_2742 684
19 3300049759 Ga0501262_000389 Ga0501262_000389_675_2756 684
20 3300003752 Ga0055539_1000160 Ga0055539_10001604 685
21 3300003756 Ga0055533_1000162 Ga0055533_10001624 685
22 3300003759 Ga0055525_1000912 Ga0055525_10009124 685
23 3300025226 Ga0209674_100003 Ga0209674_10000351 685
24 3300025230 Ga0209563_100217 Ga0209563_1002174 685
25 3300025253 Ga0209677_100107 Ga0209677_10010751 685
26 3300047443 Ga0495687_001671 Ga0495687_001671_16486_18615 685
27 3300053134 Ga0500658_0000962 Ga0500658_0000962_6275_8404 685
28 3300053154 Ga0500619_000215 Ga0500619_000215_3900_6074 685
29 3300006944 Ga0099823_1008208 Ga0099823_10082083 686
30 3300014326 Ga0157380_10005378 Ga0157380_100053785 686
31 3300025273 Ga0209673_1009743 Ga0209673_10097432 686
32 3300050493 nmdc:mga0k408_6760_c1 nmdc:mga0k408_6760_c1_59_2170 686
33 3300053117 Ga0500593_000170 Ga0500593_000170_16829_19036 686
34 3300005455 Ga0070663_100041878 Ga0070663_1000418781 687
35 3300044684 Ga0466966_0000511 Ga0466966_0000511_11323_13395 688
36 3300045049 Ga0466959_0000103 Ga0466959_0000103_49344_51416 688
37 3300045836 Ga0466958_0008973 Ga0466958_0008973_1685_3757 688
38 3300005467 Ga0070706_100002046 Ga0070706_10000204613 689
39 3300025910 Ga0207684_10002700 Ga0207684_1000270015 689
40 iso_pu_bacteria 2886848708 2886851375 690
41 3300036401 Ga0373937_0015632 Ga0373937_0015632_2912_5029 695
42 3300046459 Ga0495629_0043125 Ga0495629_0043125_152_2269 695
43 3300046681 Ga0495647_0002223 Ga0495647_0002223_217_2334 695
44 3300048915 Ga0496112_0118357 Ga0496112_0118357_96_2225 695
45 3300053077 Ga0495601_0017345 Ga0495601_0017345_610_2727 695
46 3300025298 Ga0209050_1000178 Ga0209050_100017854 696
47 iso_pu_bacteria 2513020051 2513228752 696
48 iso_pu_bacteria 2831864461 2831868320 697
49 iso_pu_bacteria 8018150411 8018150650 697
50 3300009148 Ga0105243_10000681 Ga0105243_1000068111 698
51 3300014745 Ga0157377_10000006 Ga0157377_10000006270 698
52 3300031838 Ga0307518_10034511 Ga0307518_100345111 698
53 3300005356 Ga0070674_100046270 Ga0070674_1000462702 699
54 3300013296 Ga0157374_10104745 Ga0157374_101047452 699
55 3300031507 Ga0307509_10004444 Ga0307509_1000444412 699
56 3300031616 Ga0307508_10068987 Ga0307508_100689871 699
57 3300033180 Ga0307510_10063666 Ga0307510_100636662 699
58 3300033180 Ga0307510_10074361 Ga0307510_100743612 699
59 3300047472 Ga0495686_0000019 Ga0495686_0000019_424292_426451 699
60 3300028794 Ga0307515_10009270 Ga0307515_100092703 700
61 iso_pu_bacteria 2816332256 2817276190 700
62 3300005457 Ga0070662_100052581 Ga0070662_1000525812 701
63 3300042011 Ga0439454_000517 Ga0439454_000517_641_2866 701
64 3300042438 Ga0439459_0001537 Ga0439459_0001537_1185_3410 701
65 3300050496 nmdc:mga07m45_41642_c1 nmdc:mga07m45_41642_c1_258_2483 701
66 iso_pu_bacteria 2929520902 2929522501 702
67 3300003794 Ga0055531_10004784 Ga0055531_100047846 703
68 3300009036 Ga0105244_10026806 Ga0105244_100268062 703
69 3300012497 Ga0157319_1000017 Ga0157319_100001768 703
70 3300031548 Ga0307408_100024651 Ga0307408_1000246513 703
71 3300041997 Ga0439431_0005558 Ga0439431_0005558_174_2351 703
72 3300047446 Ga0495679_000019 Ga0495679_000019_106326_108494 703
73 iso_pu_bacteria 2513237083 2513566688 703
74 iso_pu_bacteria 8003955200 8003962576 703
75 3300044712 Ga0453684_0038486 Ga0453684_0038486_1141_3405 704
76 3300045051 Ga0451576_0045455 Ga0451576_0045455_2216_4480 704
77 3300005563 Ga0068855_100042060 Ga0068855_1000420602 705
78 3300025949 Ga0207667_10033709 Ga0207667_100337093 705
79 3300028794 Ga0307515_10004238 Ga0307515_100042385 705
80 3300028794 Ga0307515_10090229 Ga0307515_100902292 705
81 3300006195 Ga0075366_10017508 Ga0075366_100175082 706
82 3300013105 Ga0157369_10001906 Ga0157369_100019067 707
83 3300031456 Ga0307513_10026816 Ga0307513_100268162 707
84 3300048919 Ga0496116_0005929 Ga0496116_0005929_713_2842 707
85 3300039447 Ga0436361_0667541 Ga0436361_0667541_3211_5373 708
86 3300044683 Ga0466965_0005243 Ga0466965_0005243_2267_4480 708
87 3300005436 Ga0070713_100039736 Ga0070713_1000397362 709
88 3300025297 Ga0209758_1000650 Ga0209758_100065024 709
89 3300025928 Ga0207700_10029498 Ga0207700_100294982 709
90 3300031730 Ga0307516_10022529 Ga0307516_100225295 709
91 3300046452 Ga0495617_000473 Ga0495617_000473_16294_18444 709
92 3300046501 Ga0495607_0000039 Ga0495607_0000039_111287_113437 709
93 3300046513 Ga0495616_0000810 Ga0495616_0000810_17195_19345 709
94 3300046513 Ga0495616_0001667 Ga0495616_0001667_3576_5726 709
95 3300046691 Ga0495670_0012102 Ga0495670_0012102_210_2360 709
96 3300046692 Ga0495671_0000113 Ga0495671_0000113_7696_9846 709
97 3300046810 Ga0495660_0000066 Ga0495660_0000066_50240_52390 709
98 3300048921 Ga0496118_0020765 Ga0496118_0020765_1146_3320 709
99 3300048924 Ga0496121_0011396 Ga0496121_0011396_6197_8371 709
100 3300053087 Ga0500643_000020 Ga0500643_000020_173366_175516 709
101 3300053088 Ga0500644_0001459 Ga0500644_0001459_1064_3427 709
102 3300025294 Ga0209025_1001630 Ga0209025_10016303 710
103 iso_pu_bacteria 2643221644 2644243657 710
104 3300005843 Ga0068860_100101376 Ga0068860_1001013762 711
105 3300028381 Ga0268264_10064865 Ga0268264_100648652 711
106 3300042435 Ga0439434_0005062 Ga0439434_0005062_977_3112 711
107 3300053079 Ga0500610_0000151 Ga0500610_0000151_17900_20068 712
108 3300005262 Ga0065165_1000707 Ga0065165_100070724 713
109 3300005331 Ga0070670_100006017 Ga0070670_1000060174 713
110 3300005354 Ga0070675_100038311 Ga0070675_1000383111 713
111 3300005364 Ga0070673_100006812 Ga0070673_1000068122 713
112 3300005456 Ga0070678_100022001 Ga0070678_1000220012 713
113 3300025295 Ga0209564_1000478 Ga0209564_100047822 713
114 3300025926 Ga0207659_10032773 Ga0207659_100327731 713
115 3300025933 Ga0207706_10000280 Ga0207706_1000028011 713
116 3300025940 Ga0207691_10028167 Ga0207691_100281671 713
117 3300025986 Ga0207658_10024958 Ga0207658_100249582 713
118 3300037471 Ga0395905_0000811 Ga0395905_0000811_37924_40149 713
119 3300047323 Ga0495683_0000129 Ga0495683_0000129_1682_3844 713
120 3300053125 Ga0500618_000389 Ga0500618_000389_4907_7069 713
121 3300014969 Ga0157376_10013457 Ga0157376_100134571 714
122 3300025303 Ga0209051_1005214 Ga0209051_10052145 714
123 3300003323 rootH1_10004143 rootH1_100041438 715
124 3300005356 Ga0070674_100006106 Ga0070674_1000061064 715
125 3300032005 Ga0307411_10003487 Ga0307411_100034872 715
126 3300041404 Ga0439436_0000596 Ga0439436_0000596_6527_8779 715
127 3300041411 Ga0439466_0001524 Ga0439466_0001524_837_3089 715
128 3300041999 Ga0439433_0000481 Ga0439433_0000481_2666_4918 715
129 3300042004 Ga0439445_0000480 Ga0439445_0000480_536_2788 715
130 3300042006 Ga0439432_001636 Ga0439432_001636_1165_3417 715
131 3300042015 Ga0439462_0001640 Ga0439462_0001640_278_2530 715
132 3300044684 Ga0466966_0002155 Ga0466966_0002155_2506_4755 715
133 3300025254 Ga0209148_1001146 Ga0209148_10011463 716
134 3300031730 Ga0307516_10011540 Ga0307516_100115403 716
135 3300045051 Ga0451576_0040233 Ga0451576_0040233_2718_4928 716
136 3300031730 Ga0307516_10000428 Ga0307516_1000042814 717
137 3300044842 Ga0466957_0002152 Ga0466957_0002152_1969_4146 717
138 3300045049 Ga0466959_0082757 Ga0466959_0082757_23_2200 717
139 3300045051 Ga0451576_0008423 Ga0451576_0008423_7371_9530 717
140 3300061719 Ga0466962_0000636 Ga0466962_0000636_13045_15222 717
141 3300005355 Ga0070671_100006099 Ga0070671_1000060994 719
142 3300005719 Ga0068861_100009002 Ga0068861_1000090024 719
143 3300025931 Ga0207644_10003391 Ga0207644_100033914 719
144 3300026118 Ga0207675_100024352 Ga0207675_1000243524 719
145 3300037471 Ga0395905_0021289 Ga0395905_0021289_680_2983 719
146 3300038443 Ga0395901_0077660 Ga0395901_0077660_486_2690 719
147 3300048927 Ga0496124_0000386 Ga0496124_0000386_49752_51920 719
148 iso_pu_bacteria 2831265667 2831270120 719
149 iso_pu_bacteria 2881101125 2881105405 719
150 3300003794 Ga0055531_10000282 Ga0055531_1000028240 721
151 3300006353 Ga0075370_10000539 Ga0075370_100005397 721
152 3300025304 Ga0209257_1000022 Ga0209257_1000022410 721
153 3300037418 Ga0395900_0000054 Ga0395900_0000054_8162_10351 721
154 3300044658 Ga0466972_0004483 Ga0466972_0004483_1518_3719 721
155 3300050496 nmdc:mga07m45_2343_c1 nmdc:mga07m45_2343_c1_6522_8750 721
156 3300031239 Ga0265328_10008244 Ga0265328_100082442 722
157 3300031251 Ga0265327_10000877 Ga0265327_1000087722 722
158 3300005331 Ga0070670_100050043 Ga0070670_1000500432 723
159 3300005456 Ga0070678_100020728 Ga0070678_1000207281 723
160 3300005459 Ga0068867_100000016 Ga0068867_100000016101 723
161 3300013306 Ga0163162_10000537 Ga0163162_1000053717 723
162 3300025935 Ga0207709_10000857 Ga0207709_1000085716 723
163 3300026089 Ga0207648_10000023 Ga0207648_10000023129 723
164 3300026121 Ga0207683_10013639 Ga0207683_100136392 723
165 3300047320 Ga0495672_0000013 Ga0495672_0000013_223562_225778 723
166 iso_pu_bacteria 2588253510 2588293365 724
167 3300005543 Ga0070672_100007253 Ga0070672_1000072533 725
168 3300005616 Ga0068852_100029928 Ga0068852_1000299283 725
169 3300005842 Ga0068858_100050098 Ga0068858_1000500982 725
170 3300009093 Ga0105240_10026261 Ga0105240_100262612 725
171 3300009545 Ga0105237_10016634 Ga0105237_100166342 725
172 3300010375 Ga0105239_10018775 Ga0105239_100187752 725
173 3300013308 Ga0157375_10013564 Ga0157375_100135642 725
174 3300014968 Ga0157379_10004382 Ga0157379_1000438212 725
175 3300025913 Ga0207695_10045440 Ga0207695_100454402 725
176 3300026067 Ga0207678_10008699 Ga0207678_100086993 725
177 3300026142 Ga0207698_10034685 Ga0207698_100346852 725
178 iso_pu_bacteria 2588253510 2588294676 725
179 3300005563 Ga0068855_100000148 Ga0068855_10000014835 726
180 3300005578 Ga0068854_100000054 Ga0068854_10000005447 726
181 3300009093 Ga0105240_10006201 Ga0105240_100062014 726
182 3300025913 Ga0207695_10007826 Ga0207695_100078265 726
183 3300025949 Ga0207667_10000062 Ga0207667_1000006253 726
184 3300025981 Ga0207640_10000022 Ga0207640_1000002259 726
185 3300031649 Ga0307514_10001218 Ga0307514_1000121829 726
186 3300003323 rootH1_10000852 rootH1_100008526 727
187 3300003794 Ga0055531_10001183 Ga0055531_100011832 727
188 3300004625 Ga0055543_1002908 Ga0055543_10029082 727
189 3300005262 Ga0065165_1000151 Ga0065165_10001514 727
190 3300025273 Ga0209673_1003801 Ga0209673_10038012 727
191 3300025299 Ga0209256_1000630 Ga0209256_10006303 727
192 3300025303 Ga0209051_1004905 Ga0209051_10049053 727
193 3300025304 Ga0209257_1001373 Ga0209257_10013734 727
194 3300028379 Ga0268266_10034261 Ga0268266_100342611 727
195 3300044694 Ga0466963_0026916 Ga0466963_0026916_541_2745 727
196 3300025295 Ga0209564_1000005 Ga0209564_1000005103 728
197 3300042876 Ga0451577_0006049 Ga0451577_0006049_8689_11046 729
198 3300044712 Ga0453684_0133430 Ga0453684_0133430_187_2544 729
199 3300028794 Ga0307515_10021749 Ga0307515_100217492 730
200 3300042007 Ga0439449_0000760 Ga0439449_0000760_4365_6587 730
201 3300003794 Ga0055531_10004041 Ga0055531_100040414 731
202 3300009148 Ga0105243_10030470 Ga0105243_100304703 731
203 3300025303 Ga0209051_1000306 Ga0209051_100030641 731
204 3300025304 Ga0209257_1000015 Ga0209257_1000015412 731
205 3300031456 Ga0307513_10029761 Ga0307513_100297612 731
206 iso_pu_bacteria 2585428057 2587728956 731
207 3300005563 Ga0068855_100025385 Ga0068855_1000253852 733
208 3300031456 Ga0307513_10000020 Ga0307513_10000020124 735
209 iso_pu_bacteria 2885198086 2885200323 736
210 iso_pu_bacteria 2885211737 2885213975 736
211 iso_pu_bacteria 2939631187 2939631918 736
212 iso_pu_bacteria 2929160207 2929164773 738
213 3300031731 Ga0307405_10003104 Ga0307405_100031042 739
214 3300046660 Ga0495625_0028951 Ga0495625_0028951_266_2533 739
215 3300053153 Ga0500616_0002477 Ga0500616_0002477_8038_10281 739
216 iso_pu_bacteria 2842718218 2842722440 739
217 3300053730 Ga0500645_003314 Ga0500645_003314_3215_5608 744
218 3300053122 Ga0500608_004341 Ga0500608_004341_1129_3366 745
219 3300025291 Ga0209675_1005872 Ga0209675_10058723 746
220 iso_pu_bacteria 2599185214 2599627720 746
221 iso_pu_bacteria 2599185226 2599677359 746
222 iso_pu_bacteria 2599185227 2599685423 746
223 iso_pu_bacteria 2599185229 2599697163 746
224 iso_pu_bacteria 2838054893 2838060590 746
225 iso_pu_bacteria 2928051484 2928051487 746
226 iso_pu_bacteria 2928070936 2928077089 746
227 iso_pu_bacteria 2990710928 2990714630 746
228 3300025258 Ga0209129_1004295 Ga0209129_10042953 747
229 3300025263 Ga0209565_1005111 Ga0209565_10051112 747
230 3300025273 Ga0209673_1000089 Ga0209673_1000089191 747
231 3300025284 Ga0209130_1003973 Ga0209130_10039732 747
232 3300025292 Ga0209676_1004406 Ga0209676_10044062 747
233 3300025294 Ga0209025_1007740 Ga0209025_10077402 747
234 3300025295 Ga0209564_1002924 Ga0209564_10029242 747
235 3300025299 Ga0209256_1000973 Ga0209256_100097330 747
236 3300025302 Ga0207426_1000584 Ga0207426_100058445 747
237 3300048928 Ga0496125_0020544 Ga0496125_0020544_1607_3865 747
238 3300002773 JGI25152J39213_1006488 JGI25152J39213_10064881 750
239 3300025258 Ga0209129_1001594 Ga0209129_10015945 750
240 3300025263 Ga0209565_1000785 Ga0209565_100078511 750
241 3300025263 Ga0209565_1002190 Ga0209565_10021906 750
242 3300025291 Ga0209675_1001120 Ga0209675_10011205 750
243 3300025294 Ga0209025_1011243 Ga0209025_10112435 750
244 3300025295 Ga0209564_1001206 Ga0209564_10012062 750
245 3300025299 Ga0209256_1003606 Ga0209256_10036062 750
246 3300025302 Ga0207426_1000835 Ga0207426_10008352 750

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

180

450

0.98

PF00005

ABC_tran

ABC transporter

512

661

0.96

PF03412

Peptidase_C39

Peptidase C39 family

20

156

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9777 494 731
8dck-assembly1.cif.gz_B structure of hemolysin a secretion system hlyb/d complex, atp-bound 0.9693 163 731
8dck-assembly1.cif.gz_B structure of hemolysin a secretion system hlyb/d complex, atp-bound 0.966 163 731
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9618 494 731
2fgj-assembly3.cif.gz_C crystal structure of the abc-cassette h662a mutant of hlyb with bound atp 0.9604 494 731
ID Description Score Start End Superfamily
af_Q19015_398_655_1.20.1560.10 Mainly Alpha;Up-down Bundle;ABC transporter transmembrane region fold;ABC transporter type 1, transmembrane domain 0.9668 522 732 1.20.1560.10
af_Q19015_1020_1270_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9655 512 732 3.40.50.300
af_P0AAG5_335_579_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.964 488 731 3.40.50.300
af_A0A1D6EBI5_368_610_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.962 486 718 3.40.50.300
af_Q61102_466_725_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9608 488 732 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A820M297-F1-model_v4 Uncharacterized protein 0.9599 487 732 GO:0005524
GO:0005743
GO:0015421
GO:0016887
GO:0090374
AF-Q0JK51-F1-model_v4 Os01g0695800 protein 0.953 482 732 GO:0005524
GO:0016020
GO:0016887
AF-M5C5N4-F1-model_v4 ATP-binding cassette, subfamily B (MDR/TAP),member 1 (EC 3.6.1.3) 0.9508 486 732 GO:0005524
GO:0016020
GO:0016887
GO:0042626
AF-A0A2E8TNX0-F1-model_v4 ABC transporter domain-containing protein 0.9508 495 731 GO:0005524
GO:0016887
GO:0042626
AF-A0A352AJR1-F1-model_v4 Type I secretion system permease/ATPase 0.9497 470 732 GO:0005524
GO:0005886
GO:0015421
GO:0016887
GO:0090374

Feature Viewer

pLDDT pTM Quality
77.64 0.63 Medium
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Predicted Structure (AlphaFold2)

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