F358357

General Info

Members Datasets Scaffolds Average Seq Length
246 174 492 194

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_1003025|Ga0436361_1003025_4214_4843
Length 209
Sequence VACYQAKFIEARIVVRKGAVIRKTTETSIEVAIDLDGSGASDISTGVGFFDHMLDQLARHSLFDLTIRAEGDRHIDDHHTVEDVGIALGQALAKALADKRGLTRYADCLLPMDETLTRVALDVSGRPFLVFRTEFPTERIGSFDTQLVREFFQAFAGNAGLTLHIETLYGTNSHHIAEASFKGVARALKAALAIDPRQAGEVPSTKGAL

Samples

Sample ID Description Type Environment
1 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
46 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
47 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
66 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
70 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
71 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
72 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
78 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
83 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
92 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
93 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
94 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
98 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
99 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
103 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
104 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
105 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
106 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
107 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
110 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
111 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
112 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
113 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
114 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
115 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
116 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
117 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
118 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
119 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
120 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
121 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
122 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
123 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
124 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
125 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
142 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
143 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
144 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
145 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
155 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
156 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
157 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
158 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
159 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
161 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
164 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
165 2643221734 Bosea sp. Root670 Isolate Unclassified
166 2791355196 Bradyrhizobium sp. Y36 Isolate Nodule
167 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
168 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
169 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
170 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
171 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
172 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
173 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
174 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.12
Metatranscriptomes 0
Isolates 4.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.54
Nodule 1.63
Rhizoplane 6.1
Rhizosphere 79.67
Stem 0
Stem Tuber 0
Unclassified 0.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436361_1003025 3300039447 Bacteria 5040
2 JGI25406J46586_10049644 3300003203 Bacteria 1414
3 Ga0065715_10008180 3300005293 Bacteria 2697
4 Ga0068868_100537956 3300005338 Bacteria 1028
5 Ga0070708_100021741 3300005445 Bacteria 5431
6 Ga0070681_10040204 3300005458 Bacteria 4688
7 Ga0070681_10178520 3300005458 Bacteria 2045
8 Ga0070706_100085748 3300005467 Bacteria 2918
9 Ga0070706_100113052 3300005467 Bacteria 2528
10 Ga0070706_100198133 3300005467 Bacteria 1876
11 Ga0070707_100275238 3300005468 Bacteria 1636
12 Ga0070698_100006926 3300005471 Bacteria 12281
13 Ga0070698_100084390 3300005471 Bacteria 3164
14 Ga0070699_100101472 3300005518 Bacteria 2522
15 Ga0070697_100368367 3300005536 Bacteria 1243
16 Ga0068853_100979169 3300005539 Bacteria 814
17 Ga0070695_100015010 3300005545 Bacteria 4673
18 Ga0070696_100068903 3300005546 Bacteria 2485
19 Ga0070704_100204036 3300005549 Bacteria 1598
20 Ga0068855_100359629 3300005563 Bacteria 1602
21 Ga0068854_100470770 3300005578 Bacteria 1053
22 Ga0068859_100948423 3300005617 Bacteria 944
23 Ga0068860_100055887 3300005843 Bacteria 3753
24 Ga0068862_100310950 3300005844 Bacteria 1452
25 Ga0081455_10096833 3300005937 Bacteria 2379
26 Ga0081455_10141812 3300005937 Bacteria 1865
27 Ga0081539_10001498 3300005985 Bacteria 39469
28 Ga0081539_10082209 3300005985 Bacteria 1689
29 Ga0075363_100006627 3300006048 Bacteria 5276
30 Ga0075363_100009861 3300006048 Bacteria 4506
31 Ga0075364_10010820 3300006051 Bacteria 5523
32 Ga0070712_100999177 3300006175 Bacteria 724
33 Ga0075362_10001229 3300006177 Bacteria 8066
34 Ga0075367_10018545 3300006178 Bacteria 3843
35 Ga0075366_10004924 3300006195 Bacteria 7204
36 Ga0075428_100135616 3300006844 Bacteria 2676
37 Ga0075430_100112996 3300006846 Bacteria 2264
38 Ga0075430_100477226 3300006846 Unclassified 1029
39 Ga0075431_100935510 3300006847 Bacteria 835
40 Ga0075433_10032066 3300006852 Bacteria 4497
41 Ga0075434_100106132 3300006871 Bacteria 2819
42 Ga0075434_100310051 3300006871 Bacteria 1598
43 Ga0075429_100089557 3300006880 Bacteria 2682
44 Ga0075429_100453636 3300006880 Bacteria 1123
45 Ga0097620_100948173 3300006931 Bacteria 944
46 Ga0075435_100041375 3300007076 Bacteria 3683
47 Ga0075435_100172250 3300007076 Bacteria 1826
48 Ga0111539_10412282 3300009094 Bacteria 1573
49 Ga0114129_10392547 3300009147 Bacteria 1830
50 Ga0114129_10669512 3300009147 Bacteria 1337
51 Ga0114129_10805885 3300009147 Bacteria 1198
52 Ga0105242_10028840 3300009176 Bacteria 4421
53 Ga0105242_10977278 3300009176 Bacteria 853
54 Ga0105249_10594531 3300009553 Bacteria 1161
55 Ga0105249_11655488 3300009553 Bacteria 712
56 Ga0105239_10487706 3300010375 Bacteria 1400
57 Ga0105246_10065824 3300011119 Bacteria 2535
58 Ga0105246_10741878 3300011119 Bacteria 865
59 Ga0157375_11488907 3300013308 Bacteria 799
60 Ga0163163_11320691 3300014325 Bacteria 783
61 Ga0163163_11650710 3300014325 Bacteria 702
62 Ga0213872_10009224 3300021361 Bacteria 4741
63 Ga0213876_10020005 3300021384 Bacteria 3535
64 Ga0209675_1002896 3300025291 Bacteria 8494
65 Ga0209564_1000043 3300025295 Bacteria 388153
66 Ga0209564_1000052 3300025295 Bacteria 356578
67 Ga0209256_1000316 3300025299 Bacteria 83704
68 Ga0207684_10054230 3300025910 Bacteria 3401
69 Ga0207684_10054948 3300025910 Bacteria 3378
70 Ga0207707_10034783 3300025912 Bacteria 4408
71 Ga0207707_10112783 3300025912 Bacteria 2377
72 Ga0207663_10211533 3300025916 Bacteria 1406
73 Ga0207660_10397154 3300025917 Bacteria 1110
74 Ga0207652_10645944 3300025921 Bacteria 946
75 Ga0207646_10059110 3300025922 Bacteria 3424
76 Ga0207646_10076577 3300025922 Bacteria 2989
77 Ga0207646_10151505 3300025922 Bacteria 2091
78 Ga0207687_10088234 3300025927 Bacteria 2256
79 Ga0207687_10131331 3300025927 Bacteria 1888
80 Ga0207706_10371480 3300025933 Bacteria 1242
81 Ga0207686_10015281 3300025934 Bacteria 4290
82 Ga0207686_10463303 3300025934 Bacteria 977
83 Ga0207686_10609790 3300025934 Bacteria 860
84 Ga0207709_10122856 3300025935 Bacteria 1756
85 Ga0207709_10219961 3300025935 Bacteria 1369
86 Ga0207665_10072892 3300025939 Bacteria 2347
87 Ga0207711_10476477 3300025941 Bacteria 1163
88 Ga0207667_10142132 3300025949 Bacteria 2471
89 Ga0207712_10860009 3300025961 Bacteria 800
90 Ga0207683_10820636 3300026121 Bacteria 863
91 Ga0207428_10567784 3300027907 Bacteria 819
92 Ga0268264_10166595 3300028381 Bacteria 1990
93 Ga0265336_10015932 3300028666 Bacteria 2464
94 Ga0265338_10000403 3300028800 Bacteria 77459
95 Ga0265338_10091997 3300028800 Bacteria 2503
96 Ga0265338_10151447 3300028800 Bacteria 1802
97 Ga0265330_10198446 3300031235 Bacteria 848
98 Ga0265325_10001145 3300031241 Bacteria 19045
99 Ga0265325_10018220 3300031241 Bacteria 3892
100 Ga0265325_10086989 3300031241 Bacteria 1545
101 Ga0265339_10000489 3300031249 Bacteria 30979
102 Ga0265339_10028333 3300031249 Bacteria 3187
103 Ga0265331_10090425 3300031250 Bacteria 1415
104 Ga0265327_10010431 3300031251 Bacteria 6538
105 Ga0265316_10074615 3300031344 Bacteria 2610
106 Ga0265316_10189238 3300031344 Bacteria 1529
107 Ga0307408_100051855 3300031548 Bacteria 2958
108 Ga0265314_10084909 3300031711 Bacteria 2077
109 Ga0265314_10172057 3300031711 Bacteria 1306
110 Ga0265314_10290434 3300031711 Bacteria 921
111 Ga0307410_10015005 3300031852 Bacteria 4582
112 Ga0307406_10328586 3300031901 Bacteria 1186
113 Ga0307409_100475321 3300031995 Bacteria 1211
114 Ga0307416_100006336 3300032002 Bacteria 7396
115 Ga0307414_10188295 3300032004 Bacteria 1667
116 Ga0373946_0226249 3300035171 Bacteria 905
117 Ga0373947_0044675 3300035725 Bacteria 2649
118 Ga0373937_0036168 3300036401 Bacteria 4499
119 Ga0373925_0220212 3300037068 Bacteria 1515
120 Ga0395899_0070459 3300037312 Bacteria 2559
121 Ga0395900_0019797 3300037418 Bacteria 6858
122 Ga0395900_0156236 3300037418 Bacteria 2329
123 Ga0395900_0556747 3300037418 Bacteria 1091
124 Ga0395898_0006210 3300037466 Bacteria 12801
125 Ga0395898_0102686 3300037466 Bacteria 2744
126 Ga0395901_0022711 3300038443 Bacteria 6432
127 Ga0395901_0049662 3300038443 Bacteria 4359
128 Ga0436365_0925969 3300039437 Bacteria 3335
129 Ga0436360_0395790 3300039438 Bacteria 656
130 Ga0436360_0566315 3300039438 Bacteria 1644
131 Ga0436361_0903455 3300039447 Bacteria 1066
132 Ga0439452_031569 3300042010 Bacteria 1299
133 Ga0439434_0028528 3300042435 Bacteria 1690
134 Ga0466968_0335698 3300044735 Bacteria 732
135 Ga0495592_0105464 3300046454 Bacteria 2002
136 Ga0495629_0316143 3300046459 Bacteria 1068
137 Ga0495653_0152082 3300046463 Bacteria 1616
138 Ga0495653_0348558 3300046463 Bacteria 953
139 Ga0495582_0112798 3300046473 Bacteria 1527
140 Ga0495584_0072771 3300046491 Bacteria 1727
141 Ga0495608_0044881 3300046511 Bacteria 2948
142 Ga0495608_0224703 3300046511 Bacteria 1177
143 Ga0495628_0007408 3300046516 Bacteria 9500
144 Ga0495630_0235394 3300046517 Bacteria 1399
145 Ga0495637_0221451 3300046520 Bacteria 689
146 Ga0495666_0119497 3300046526 Bacteria 1235
147 Ga0495666_0237741 3300046526 Bacteria 832
148 Ga0495652_0339381 3300046529 Bacteria 1080
149 Ga0495652_0404296 3300046529 Bacteria 966
150 Ga0495665_0358815 3300046531 Bacteria 742
151 Ga0495640_0055185 3300046533 Bacteria 2718
152 Ga0495640_0354864 3300046533 Bacteria 905
153 Ga0495645_0221599 3300046543 Bacteria 1272
154 Ga0495635_0132801 3300046663 Bacteria 1697
155 Ga0495657_0583921 3300046675 Bacteria 647
156 Ga0495599_0262917 3300046678 Bacteria 1048
157 Ga0495623_0450804 3300046679 Bacteria 685
158 Ga0495647_0170689 3300046681 Bacteria 942
159 Ga0495658_0209060 3300046683 Bacteria 1219
160 Ga0495658_0386332 3300046683 Bacteria 892
161 Ga0495613_0046592 3300046689 Bacteria 3206
162 Ga0495613_0239909 3300046689 Bacteria 1268
163 Ga0495613_0251407 3300046689 Bacteria 1233
164 Ga0495670_0075618 3300046691 Bacteria 1710
165 Ga0495670_0335204 3300046691 Bacteria 813
166 Ga0495674_0318347 3300047319 Bacteria 1268
167 Ga0495674_0627464 3300047319 Bacteria 849
168 Ga0495676_0120355 3300047321 Bacteria 1911
169 Ga0495676_0190648 3300047321 Bacteria 1430
170 Ga0495680_0048013 3300047322 Bacteria 3355
171 Ga0495677_0161147 3300047445 Bacteria 866
172 Ga0495673_0096766 3300047469 Bacteria 1199
173 Ga0495684_0625445 3300047471 Bacteria 723
174 Ga0495615_0150239 3300048090 Bacteria 693
175 Ga0496100_0310495 3300048903 Bacteria 1182
176 Ga0496101_0576659 3300048904 Bacteria 890
177 Ga0496104_0566752 3300048907 Bacteria 1046
178 Ga0496105_0059443 3300048908 Bacteria 3154
179 Ga0496105_0135377 3300048908 Bacteria 2030
180 Ga0496108_0163018 3300048911 Bacteria 1927
181 Ga0496109_0011416 3300048912 Bacteria 7636
182 Ga0496109_0405950 3300048912 Bacteria 1287
183 Ga0496109_1083772 3300048912 Bacteria 738
184 Ga0496110_0041053 3300048913 Bacteria 4035
185 Ga0496111_0146970 3300048914 Bacteria 1748
186 Ga0496112_0210699 3300048915 Bacteria 1901
187 Ga0496112_0526540 3300048915 Bacteria 1116
188 Ga0496113_0008862 3300048916 Bacteria 6578
189 Ga0496115_0317380 3300048918 Bacteria 1275
190 Ga0496126_0203969 3300048929 Bacteria 1668
191 Ga0501039_0144094 3300049575 Bacteria 1872
192 Ga0501040_0473876 3300049576 Bacteria 902
193 Ga0501068_0218085 3300049584 Bacteria 1212
194 Ga0501072_0055777 3300049588 Bacteria 3114
195 Ga0501072_0887662 3300049588 Bacteria 697
196 Ga0501083_0308059 3300049744 Bacteria 1030
197 nmdc:mga03683_10611_c1 3300050489 Bacteria 3309
198 nmdc:mga03n38_1626_c1 3300050490 Bacteria 6569
199 nmdc:mga03n38_96356_c1 3300050490 Bacteria 1419
200 nmdc:mga00v17_10354_c1 3300050491 Bacteria 4549
201 nmdc:mga0yw44_252796_c1 3300050492 Bacteria 1173
202 nmdc:mga0yw44_378541_c1 3300050492 Bacteria 955
203 nmdc:mga0k408_19827_c1 3300050493 Bacteria 3763
204 nmdc:mga05p37_1545765_c1 3300050507 Bacteria 657
205 nmdc:mga05p37_874703_c1 3300050507 Bacteria 973
206 nmdc:mga09592_157636_c1 3300050508 Bacteria 1960
207 nmdc:mga09592_397159_c1 3300050508 Bacteria 1192
208 nmdc:mga0qj67_139696_c1 3300050509 Bacteria 1964
209 nmdc:mga0qj67_248723_c1 3300050509 Bacteria 1443
210 nmdc:mga06r32_105780_c1 3300050510 Bacteria 2765
211 nmdc:mga06r32_70165_c1 3300050510 Bacteria 3388
212 nmdc:mga06r32_937740_c1 3300050510 Bacteria 821
213 nmdc:mga08y16_222336_c1 3300050511 Bacteria 1954
214 nmdc:mga08y16_708369_c1 3300050511 Bacteria 1006
215 nmdc:mga0n895_47347_c1 3300050512 Bacteria 4204
216 nmdc:mga0rr50_245180_c1 3300050513 Bacteria 1486
217 nmdc:mga0a205_125718_c1 3300050515 Bacteria 2464
218 Ga0495601_0034672 3300053077 Bacteria 3149
219 Ga0495601_0155947 3300053077 Bacteria 1491
220 Ga0495601_0165606 3300053077 Bacteria 1445
221 Ga0495612_0030582 3300053078 Bacteria 2169
222 Ga0495595_0020752 3300053084 Bacteria 2862
223 Ga0495595_0095633 3300053084 Bacteria 1429
224 Ga0495619_0009540 3300053085 Bacteria 6125
225 Ga0495619_0027803 3300053085 Bacteria 3647
226 Ga0495619_0040372 3300053085 Bacteria 3051
227 Ga0495619_0109680 3300053085 Bacteria 1885
228 Ga0495619_0271183 3300053085 Bacteria 1176
229 Ga0495619_0684644 3300053085 Bacteria 698
230 Ga0500556_0000017 3300053104 Bacteria 192495
231 Ga0500577_0105247 3300053142 Bacteria 1158
232 Ga0500616_0119400 3300053153 Bacteria 1262
233 Ga0500622_0144404 3300053156 Bacteria 1131
234 Ga0501084_0000026 3300054114 Bacteria 132271
235 2511395438 2511231028 Bacteria 8046582
236 2513590364 2513237087 Bacteria 5817514
237 2644737597 2643221734 Bacteria 5365412
238 2793062022 2791355196 Bacteria 7323613
239 2824604605 2824600985 Bacteria 8488197
240 2824612304 2824609381 Bacteria 8672835
241 2824655169 2824653114 Bacteria 8493680
242 2841965414 2841957949 Bacteria 8652217
243 2844315317 2844315083 Bacteria 8138177
244 2888420327 2888419890 Bacteria 7857137
245 2906604255 2906602504 Bacteria 8295279
246 8057533028 8057529695 Bacteria 6306553
247 Ga0436361_1003025
248 JGI25406J46586_10049644
249 Ga0065715_10008180
250 Ga0068868_100537956
251 Ga0070708_100021741
252 Ga0070681_10040204
253 Ga0070681_10178520
254 Ga0070706_100085748
255 Ga0070706_100113052
256 Ga0070706_100198133
257 Ga0070707_100275238
258 Ga0070698_100006926
259 Ga0070698_100084390
260 Ga0070699_100101472
261 Ga0070697_100368367
262 Ga0068853_100979169
263 Ga0070695_100015010
264 Ga0070696_100068903
265 Ga0070704_100204036
266 Ga0068855_100359629
267 Ga0068854_100470770
268 Ga0068859_100948423
269 Ga0068860_100055887
270 Ga0068862_100310950
271 Ga0081455_10096833
272 Ga0081455_10141812
273 Ga0081539_10001498
274 Ga0081539_10082209
275 Ga0075363_100006627
276 Ga0075363_100009861
277 Ga0075364_10010820
278 Ga0070712_100999177
279 Ga0075362_10001229
280 Ga0075367_10018545
281 Ga0075366_10004924
282 Ga0075428_100135616
283 Ga0075430_100112996
284 Ga0075430_100477226
285 Ga0075431_100935510
286 Ga0075433_10032066
287 Ga0075434_100106132
288 Ga0075434_100310051
289 Ga0075429_100089557
290 Ga0075429_100453636
291 Ga0097620_100948173
292 Ga0075435_100041375
293 Ga0075435_100172250
294 Ga0111539_10412282
295 Ga0114129_10392547
296 Ga0114129_10669512
297 Ga0114129_10805885
298 Ga0105242_10028840
299 Ga0105242_10977278
300 Ga0105249_10594531
301 Ga0105249_11655488
302 Ga0105239_10487706
303 Ga0105246_10065824
304 Ga0105246_10741878
305 Ga0157375_11488907
306 Ga0163163_11320691
307 Ga0163163_11650710
308 Ga0213872_10009224
309 Ga0213876_10020005
310 Ga0209675_1002896
311 Ga0209564_1000043
312 Ga0209564_1000052
313 Ga0209256_1000316
314 Ga0207684_10054230
315 Ga0207684_10054948
316 Ga0207707_10034783
317 Ga0207707_10112783
318 Ga0207663_10211533
319 Ga0207660_10397154
320 Ga0207652_10645944
321 Ga0207646_10059110
322 Ga0207646_10076577
323 Ga0207646_10151505
324 Ga0207687_10088234
325 Ga0207687_10131331
326 Ga0207706_10371480
327 Ga0207686_10015281
328 Ga0207686_10463303
329 Ga0207686_10609790
330 Ga0207709_10122856
331 Ga0207709_10219961
332 Ga0207665_10072892
333 Ga0207711_10476477
334 Ga0207667_10142132
335 Ga0207712_10860009
336 Ga0207683_10820636
337 Ga0207428_10567784
338 Ga0268264_10166595
339 Ga0265336_10015932
340 Ga0265338_10000403
341 Ga0265338_10091997
342 Ga0265338_10151447
343 Ga0265330_10198446
344 Ga0265325_10001145
345 Ga0265325_10018220
346 Ga0265325_10086989
347 Ga0265339_10000489
348 Ga0265339_10028333
349 Ga0265331_10090425
350 Ga0265327_10010431
351 Ga0265316_10074615
352 Ga0265316_10189238
353 Ga0307408_100051855
354 Ga0265314_10084909
355 Ga0265314_10172057
356 Ga0265314_10290434
357 Ga0307410_10015005
358 Ga0307406_10328586
359 Ga0307409_100475321
360 Ga0307416_100006336
361 Ga0307414_10188295
362 Ga0373946_0226249
363 Ga0373947_0044675
364 Ga0373937_0036168
365 Ga0373925_0220212
366 Ga0395899_0070459
367 Ga0395900_0019797
368 Ga0395900_0156236
369 Ga0395900_0556747
370 Ga0395898_0006210
371 Ga0395898_0102686
372 Ga0395901_0022711
373 Ga0395901_0049662
374 Ga0436365_0925969
375 Ga0436360_0395790
376 Ga0436360_0566315
377 Ga0436361_0903455
378 Ga0439452_031569
379 Ga0439434_0028528
380 Ga0466968_0335698
381 Ga0495592_0105464
382 Ga0495629_0316143
383 Ga0495653_0152082
384 Ga0495653_0348558
385 Ga0495582_0112798
386 Ga0495584_0072771
387 Ga0495608_0044881
388 Ga0495608_0224703
389 Ga0495628_0007408
390 Ga0495630_0235394
391 Ga0495637_0221451
392 Ga0495666_0119497
393 Ga0495666_0237741
394 Ga0495652_0339381
395 Ga0495652_0404296
396 Ga0495665_0358815
397 Ga0495640_0055185
398 Ga0495640_0354864
399 Ga0495645_0221599
400 Ga0495635_0132801
401 Ga0495657_0583921
402 Ga0495599_0262917
403 Ga0495623_0450804
404 Ga0495647_0170689
405 Ga0495658_0209060
406 Ga0495658_0386332
407 Ga0495613_0046592
408 Ga0495613_0239909
409 Ga0495613_0251407
410 Ga0495670_0075618
411 Ga0495670_0335204
412 Ga0495674_0318347
413 Ga0495674_0627464
414 Ga0495676_0120355
415 Ga0495676_0190648
416 Ga0495680_0048013
417 Ga0495677_0161147
418 Ga0495673_0096766
419 Ga0495684_0625445
420 Ga0495615_0150239
421 Ga0496100_0310495
422 Ga0496101_0576659
423 Ga0496104_0566752
424 Ga0496105_0059443
425 Ga0496105_0135377
426 Ga0496108_0163018
427 Ga0496109_0011416
428 Ga0496109_0405950
429 Ga0496109_1083772
430 Ga0496110_0041053
431 Ga0496111_0146970
432 Ga0496112_0210699
433 Ga0496112_0526540
434 Ga0496113_0008862
435 Ga0496115_0317380
436 Ga0496126_0203969
437 Ga0501039_0144094
438 Ga0501040_0473876
439 Ga0501068_0218085
440 Ga0501072_0055777
441 Ga0501072_0887662
442 Ga0501083_0308059
443 nmdc:mga03683_10611_c1
444 nmdc:mga03n38_1626_c1
445 nmdc:mga03n38_96356_c1
446 nmdc:mga00v17_10354_c1
447 nmdc:mga0yw44_252796_c1
448 nmdc:mga0yw44_378541_c1
449 nmdc:mga0k408_19827_c1
450 nmdc:mga05p37_1545765_c1
451 nmdc:mga05p37_874703_c1
452 nmdc:mga09592_157636_c1
453 nmdc:mga09592_397159_c1
454 nmdc:mga0qj67_139696_c1
455 nmdc:mga0qj67_248723_c1
456 nmdc:mga06r32_105780_c1
457 nmdc:mga06r32_70165_c1
458 nmdc:mga06r32_937740_c1
459 nmdc:mga08y16_222336_c1
460 nmdc:mga08y16_708369_c1
461 nmdc:mga0n895_47347_c1
462 nmdc:mga0rr50_245180_c1
463 nmdc:mga0a205_125718_c1
464 Ga0495601_0034672
465 Ga0495601_0155947
466 Ga0495601_0165606
467 Ga0495612_0030582
468 Ga0495595_0020752
469 Ga0495595_0095633
470 Ga0495619_0009540
471 Ga0495619_0027803
472 Ga0495619_0040372
473 Ga0495619_0109680
474 Ga0495619_0271183
475 Ga0495619_0684644
476 Ga0500556_0000017
477 Ga0500577_0105247
478 Ga0500616_0119400
479 Ga0500622_0144404
480 Ga0501084_0000026
481 2511395438
482 2513590364
483 2644737597
484 2793062022
485 2824604605
486 2824612304
487 2824655169
488 2841965414
489 2844315317
490 2888420327
491 2906604255
492 8057533028

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00475

IGPD

Imidazoleglycerol-phosphate dehydratase

45

188

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ae8-assembly1.cif.gz_A crystal structure of imidazoleglycerol-phosphate dehydratase from staphylococcus aureus subsp. aureus n315 0.9785 15 170
2ae8-assembly1.cif.gz_E crystal structure of imidazoleglycerol-phosphate dehydratase from staphylococcus aureus subsp. aureus n315 0.9784 15 170
1rhy-assembly2.cif.gz_B crystal structure of imidazole glycerol phosphate dehydratase 0.9719 15 170
4mu0-assembly1.cif.gz_A the structure of wt a. thaliana igpd2 in complex with mn2+ and 1,2,4-triazole at 1.3 a resolution 0.9716 11 172
2f1d-assembly1.cif.gz_D x-ray structure of imidazoleglycerol-phosphate dehydratase 0.9714 11 172
ID Description Score Start End Superfamily
2f1dA02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Imidazole glycerol phosphate dehydratase; domain 1 0.9764 79 172 3.30.230.40
2ae8A02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Imidazole glycerol phosphate dehydratase; domain 1 0.9702 79 168 3.30.230.40
1rhyA02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Imidazole glycerol phosphate dehydratase; domain 1 0.967 79 168 3.30.230.40
2f1dA02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Imidazole glycerol phosphate dehydratase; domain 1 0.9664 79 172 3.30.230.40
af_Q58109_93_196_3.30.230.40 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Imidazole glycerol phosphate dehydratase; domain 1 0.9557 79 172 3.30.230.40
ID Description Score Start End GO Terms
AF-A0A7J6E5L5-F1-model_v4 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) 0.9773 11 171 GO:0000105
GO:0004424
AF-A0A523UI15-F1-model_v4 Imidazoleglycerol-phosphate dehydratase 0.9758 11 163 GO:0000105
GO:0004424
AF-Q56US8-F1-model_v4 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) 0.9751 38 166 GO:0000105
GO:0004424
AF-A0A435M6X8-F1-model_v4 deleted 0.9749 10 168
AF-A0A3A9SYX0-F1-model_v4 Imidazoleglycerol-phosphate dehydratase (IGPD) (EC 4.2.1.19) 0.9746 11 172 GO:0000105
GO:0004424
GO:0005737

Map