F358208

General Info

Members Datasets Scaffolds Average Seq Length
246 170 492 298

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10007451|Ga0213875_100074512
Length 318
Sequence MSKATIRRVAFVGIGNMGWPMAANLLKAGFDVAVVDAAPGRGALFAREVGGAAPASAAEAARGADAVVTILPTSRHVAEVVAEIKPHLSPGALVIEMSSGVPSVTRALAAELEQVGAGMIDCPVSGGVPRARTGELAILAGGDPALIDRATPLLQAMGSSVHRCGGVGTGQAMKAINNLVSAGGFLIGIEGLLIGQKFGLDPAVMVDVLNASTGMNNSTQRKFKQFVLSRRFDSGFGLDLMAKDLSIALEVARDTATPAPFAALCRELWASAAALLGPGQDHTAMAQLSERLAGAALGVTLEADPASPXXXXDRPPPR

Samples

Sample ID Description Type Environment
1 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009982 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_189 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
46 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
47 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
48 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
49 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
72 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
73 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
74 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
88 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
89 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
90 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
94 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
95 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
96 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
97 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
98 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
99 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
100 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
101 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
102 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
103 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
104 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
105 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
106 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
107 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
108 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
114 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
115 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
116 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
117 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
120 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
121 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
124 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
127 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
128 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
142 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
143 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
151 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
152 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
153 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
154 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
155 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
156 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
157 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
158 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
159 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
160 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
161 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
162 2858950400 Achromobacter sp. K91 Isolate Unclassified
163 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
164 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
165 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
166 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
167 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
168 2941479691
169 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere
170 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.09
Metatranscriptomes 0
Isolates 6.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.88
Nodule 0
Rhizoplane 2.44
Rhizosphere 75.2
Stem 0
Stem Tuber 0
Unclassified 2.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213875_10007451 3300021388 Bacteria 5650
2 JGI25406J46586_10003239 3300003203 Bacteria 7660
3 rootH1_10254543 3300003323 Bacteria 2466
4 Ga0070658_10004412 3300005327 Bacteria 11463
5 Ga0070676_10364730 3300005328 Bacteria 996
6 Ga0070683_100000162 3300005329 Bacteria 44208
7 Ga0070683_100295786 3300005329 Bacteria 1540
8 Ga0070680_100000866 3300005336 Bacteria 21501
9 Ga0070680_100002870 3300005336 Bacteria 12795
10 Ga0070682_100038292 3300005337 Bacteria 2941
11 Ga0070682_100389746 3300005337 Bacteria 1050
12 Ga0070660_100106175 3300005339 Bacteria 2230
13 Ga0070669_100261420 3300005353 Bacteria 1381
14 Ga0070671_100010574 3300005355 Bacteria 7411
15 Ga0070667_100362273 3300005367 Bacteria 1314
16 Ga0070713_100135338 3300005436 Bacteria 2177
17 Ga0070678_100104503 3300005456 Bacteria 2203
18 Ga0070681_10003364 3300005458 Bacteria 14949
19 Ga0070681_10038928 3300005458 Bacteria 4767
20 Ga0070681_10278001 3300005458 Unclassified 1585
21 Ga0070679_100003400 3300005530 Bacteria 14576
22 Ga0070679_100052994 3300005530 Bacteria 4038
23 Ga0070679_100108124 3300005530 Unclassified 2767
24 Ga0070684_100000200 3300005535 Bacteria 41899
25 Ga0070697_100040051 3300005536 Plasmid 3790
26 Ga0070665_100059830 3300005548 Bacteria 3819
27 Ga0070704_100210201 3300005549 Bacteria 1576
28 Ga0068855_100003176 3300005563 Bacteria 20113
29 Ga0068855_100010258 3300005563 Bacteria 11298
30 Ga0068854_100095343 3300005578 Bacteria 2221
31 Ga0068854_100115799 3300005578 Bacteria 2028
32 Ga0068859_100254779 3300005617 Bacteria 1846
33 Ga0068863_100520189 3300005841 Bacteria 1173
34 Ga0068858_100036709 3300005842 Bacteria 4544
35 Ga0068858_100051268 3300005842 Bacteria 3818
36 Ga0081455_10093557 3300005937 Bacteria 2430
37 Ga0081539_10000101 3300005985 Bacteria 198612
38 Ga0075364_10132843 3300006051 Bacteria 1671
39 Ga0075428_100555791 3300006844 Bacteria 1227
40 Ga0097620_100254796 3300006931 Bacteria 1846
41 Ga0105240_10006650 3300009093 Bacteria 16964
42 Ga0105240_10008100 3300009093 Bacteria 15092
43 Ga0105240_10153462 3300009093 Bacteria 2741
44 Ga0105247_10022042 3300009101 Bacteria 3834
45 Ga0114129_10196161 3300009147 Bacteria 2738
46 Ga0105242_10121119 3300009176 Bacteria 2245
47 Ga0105238_10004218 3300009551 Bacteria 14273
48 Ga0105238_10070486 3300009551 Bacteria 3494
49 Ga0105238_10262884 3300009551 Bacteria 1705
50 Ga0105147_102479 3300009982 Bacteria 1529
51 Ga0105239_10072426 3300010375 Bacteria 3788
52 Ga0105239_10127716 3300010375 Bacteria 2827
53 Ga0105239_10815247 3300010375 Bacteria 1069
54 Ga0157370_10002628 3300013104 Bacteria 21590
55 Ga0157370_10184731 3300013104 Bacteria 1936
56 Ga0157369_10034834 3300013105 Bacteria 5522
57 Ga0163162_10020377 3300013306 Bacteria 6515
58 Ga0157375_10032658 3300013308 Bacteria 4938
59 Ga0163163_10171921 3300014325 Bacteria 2213
60 Ga0157376_10192976 3300014969 Bacteria 1869
61 Ga0163161_10145221 3300017792 Bacteria 1799
62 Ga0213874_10024613 3300021377 Bacteria 1690
63 Ga0213875_10002388 3300021388 Bacteria 11299
64 Ga0213875_10006575 3300021388 Bacteria 6082
65 Ga0213871_10051907 3300021441 Bacteria 1126
66 Ga0224572_1001189 3300024225 Bacteria 3715
67 Ga0224572_1005354 3300024225 Bacteria 2285
68 Ga0209233_1009469 3300025261 Bacteria 2962
69 Ga0209233_1013329 3300025261 Bacteria 2351
70 Ga0207705_10005416 3300025909 Bacteria 9548
71 Ga0207707_10001191 3300025912 Bacteria 24487
72 Ga0207707_10002335 3300025912 Bacteria 17083
73 Ga0207707_10119028 3300025912 Bacteria 2308
74 Ga0207707_10233286 3300025912 Unclassified 1601
75 Ga0207695_10015964 3300025913 Bacteria 8815
76 Ga0207695_10021477 3300025913 Bacteria 7363
77 Ga0207660_10043772 3300025917 Bacteria 3147
78 Ga0207657_10519079 3300025919 Bacteria 932
79 Ga0207652_10003741 3300025921 Bacteria 12482
80 Ga0207652_10058951 3300025921 Bacteria 3308
81 Ga0207652_10220012 3300025921 Unclassified 1711
82 Ga0207652_10309470 3300025921 Bacteria 1426
83 Ga0207652_10352895 3300025921 Bacteria 1327
84 Ga0207681_10284349 3300025923 Bacteria 1303
85 Ga0207694_10003517 3300025924 Bacteria 12432
86 Ga0207694_10378900 3300025924 Bacteria 1174
87 Ga0207700_10217903 3300025928 Bacteria 1616
88 Ga0207644_10011221 3300025931 Bacteria 5923
89 Ga0207690_10361780 3300025932 Unclassified 1150
90 Ga0207686_10118066 3300025934 Bacteria 1801
91 Ga0207711_10166257 3300025941 Bacteria 2000
92 Ga0207661_10000041 3300025944 Bacteria 122817
93 Ga0207667_10006562 3300025949 Bacteria 14078
94 Ga0207667_10019129 3300025949 Bacteria 7658
95 Ga0207667_10236552 3300025949 Bacteria 1870
96 Ga0207712_10282728 3300025961 Bacteria 1355
97 Ga0207640_10062382 3300025981 Bacteria 2473
98 Ga0207640_10218115 3300025981 Bacteria 1458
99 Ga0207658_10028513 3300025986 Bacteria 3932
100 Ga0207703_10026279 3300026035 Bacteria 4581
101 Ga0207683_10111849 3300026121 Bacteria 2445
102 Ga0207698_10414695 3300026142 Bacteria 1291
103 Ga0268266_10058377 3300028379 Bacteria 3323
104 Ga0268266_10257579 3300028379 Bacteria 1616
105 Ga0265334_10015623 3300028573 Bacteria 3150
106 Ga0265318_10004317 3300028577 Bacteria 6913
107 Ga0265323_10000271 3300028653 Bacteria 30355
108 Ga0265336_10000688 3300028666 Bacteria 18227
109 Ga0265338_10000161 3300028800 Bacteria 122364
110 Ga0265338_10013575 3300028800 Bacteria 9179
111 Ga0265324_10009970 3300029957 Bacteria 3688
112 Ga0265327_10045373 3300031251 Bacteria 2336
113 Ga0316575_10058158 3300031665 Bacteria 1542
114 Ga0307412_10000078 3300031911 Bacteria 94880
115 Ga0307414_10033931 3300032004 Bacteria 3378
116 Ga0373936_0048763 3300035113 Bacteria 1710
117 Ga0373927_0000119 3300035695 Bacteria 59758
118 Ga0373933_0021195 3300035724 Bacteria 3689
119 Ga0373937_0065679 3300036401 Bacteria 3340
120 Ga0373925_0001658 3300037068 Bacteria 18762
121 Ga0373925_0107300 3300037068 Bacteria 2154
122 Ga0436364_0277048 3300037853 Bacteria 24522
123 Ga0436364_0553476 3300037853 Bacteria 13870
124 Ga0436364_0668388 3300037853 Bacteria 5733
125 Ga0436364_0825323 3300037853 Bacteria 11164
126 Ga0436364_0937913 3300037853 Bacteria 9557
127 Ga0436364_1311061 3300037853 Bacteria 8897
128 Ga0436361_0533119 3300039447 Bacteria 1071
129 Ga0436363_0428133 3300039450 Bacteria 1365
130 Ga0436363_0951099 3300039450 Bacteria 959
131 Ga0436363_1658342 3300039450 Bacteria 1656
132 Ga0439436_0012080 3300041404 Bacteria 2622
133 Ga0466967_0664750 3300045976 Bacteria 1031
134 Ga0495638_0001075 3300046460 Bacteria 26631
135 Ga0495651_0036533 3300046462 Bacteria 3825
136 Ga0495651_0052847 3300046462 Bacteria 3129
137 Ga0495650_0048508 3300046471 Bacteria 1769
138 Ga0495605_0008339 3300046474 Bacteria 5859
139 Ga0495585_0006136 3300046492 Bacteria 7499
140 Ga0495607_0040020 3300046501 Bacteria 2794
141 Ga0495628_0155086 3300046516 Bacteria 1742
142 Ga0495643_0078938 3300046522 Bacteria 1717
143 Ga0495648_0007816 3300046524 Bacteria 8507
144 Ga0495642_0006430 3300046528 Bacteria 4509
145 Ga0495652_0040717 3300046529 Bacteria 4016
146 Ga0495640_0131415 3300046533 Bacteria 1620
147 Ga0495645_0120662 3300046543 Bacteria 1846
148 Ga0495635_0206853 3300046663 Bacteria 1330
149 Ga0495669_0008600 3300046684 Bacteria 4297
150 Ga0495670_0031108 3300046691 Bacteria 2652
151 Ga0495649_0038226 3300046694 Bacteria 2634
152 Ga0495589_0001480 3300046794 Bacteria 13500
153 Ga0495600_0124857 3300046809 Bacteria 1674
154 Ga0495660_0124503 3300046810 Bacteria 1300
155 Ga0495674_0198590 3300047319 Bacteria 1665
156 Ga0495680_0222534 3300047322 Bacteria 1347
157 Ga0495675_0121200 3300047444 Bacteria 1629
158 Ga0495686_0073872 3300047472 Bacteria 2093
159 Ga0495602_0092907 3300048088 Bacteria 2498
160 Ga0495626_0066021 3300048091 Bacteria 1637
161 Ga0496102_0175730 3300048905 Bacteria 2016
162 Ga0496102_0654722 3300048905 Bacteria 974
163 Ga0496106_0050483 3300048909 Bacteria 3135
164 Ga0496107_0247643 3300048910 Bacteria 1326
165 Ga0496110_0132778 3300048913 Bacteria 2249
166 Ga0496116_0034470 3300048919 Bacteria 3571
167 Ga0496116_0050326 3300048919 Bacteria 2777
168 Ga0496117_0002423 3300048920 Bacteria 23609
169 Ga0496117_0014931 3300048920 Bacteria 6658
170 Ga0496117_0126553 3300048920 Unclassified 1558
171 Ga0496118_0000869 3300048921 Bacteria 47831
172 Ga0496118_0050978 3300048921 Bacteria 3170
173 Ga0496119_0002076 3300048922 Bacteria 22649
174 Ga0496119_0048774 3300048922 Bacteria 2623
175 Ga0496121_0001233 3300048924 Bacteria 44430
176 Ga0496121_0174548 3300048924 Bacteria 1557
177 Ga0496123_0055188 3300048926 Bacteria 2608
178 Ga0496124_0030037 3300048927 Bacteria 4831
179 Ga0496125_0000023 3300048928 Bacteria 449042
180 Ga0496125_0103448 3300048928 Bacteria 2089
181 Ga0496126_0000398 3300048929 Bacteria 89253
182 Ga0496126_0097980 3300048929 Bacteria 2569
183 Ga0496126_0473132 3300048929 Bacteria 1005
184 Ga0501031_0010492 3300049568 Bacteria 6034
185 Ga0501032_0000026 3300049569 Bacteria 136472
186 Ga0501032_0002575 3300049569 Bacteria 14189
187 Ga0501033_0000186 3300049570 Bacteria 59624
188 Ga0501033_0001729 3300049570 Bacteria 19082
189 Ga0501033_0256571 3300049570 Bacteria 1238
190 Ga0501034_0001408 3300049571 Bacteria 32314
191 Ga0501034_0046820 3300049571 Bacteria 4370
192 Ga0501036_0000423 3300049572 Bacteria 29916
193 Ga0501037_0000007 3300049573 Bacteria 215187
194 Ga0501037_0000032 3300049573 Bacteria 132863
195 Ga0501037_0023423 3300049573 Bacteria 4566
196 Ga0501037_0201818 3300049573 Bacteria 1405
197 Ga0501038_0001651 3300049574 Bacteria 20795
198 Ga0501038_0094863 3300049574 Bacteria 2493
199 Ga0501039_0000018 3300049575 Bacteria 176187
200 Ga0501043_0000061 3300049579 Bacteria 97512
201 Ga0501043_0000173 3300049579 Bacteria 57881
202 Ga0501046_0045258 3300049580 Bacteria 3497
203 Ga0501047_0019024 3300049581 Bacteria 6588
204 Ga0501047_0175859 3300049581 Bacteria 2008
205 Ga0501047_0209698 3300049581 Bacteria 1807
206 Ga0501068_0025823 3300049584 Bacteria 3457
207 Ga0501069_0001946 3300049585 Bacteria 10307
208 Ga0501071_0152641 3300049587 Bacteria 1723
209 Ga0501073_0262669 3300049589 Bacteria 1191
210 Ga0501074_0010795 3300049590 Bacteria 6632
211 Ga0501083_0002640 3300049744 Bacteria 12340
212 Ga0501083_0106606 3300049744 Bacteria 1845
213 Ga0501035_0000863 3300049822 Bacteria 32361
214 Ga0501035_0016522 3300049822 Bacteria 6805
215 Ga0501044_0007190 3300049823 Bacteria 12241
216 Ga0501044_0014216 3300049823 Bacteria 8596
217 Ga0501044_0044959 3300049823 Bacteria 4579
218 Ga0501044_0263790 3300049823 Bacteria 1660
219 Ga0501044_0439855 3300049823 Bacteria 1212
220 nmdc:mga00v17_1103_c1 3300050491 Bacteria 14209
221 nmdc:mga00v17_30302_c1 3300050491 Bacteria 3182
222 Ga0500572_001842 3300053111 Bacteria 5370
223 Ga0500618_017224 3300053125 Bacteria 1800
224 Ga0500559_0009181 3300053136 Bacteria 4294
225 Ga0500559_0050152 3300053136 Bacteria 1841
226 Ga0500577_0000282 3300053142 Bacteria 13232
227 Ga0500639_000012 3300053163 Bacteria 127545
228 Ga0500596_001279 3300053735 Bacteria 5081
229 Ga0501082_0014863 3300060353 Bacteria 6706
230 2501076366 2501025501 Bacteria 7768574
231 2501412957 2501025504 Bacteria 8008976
232 2511100537 2510917014 Bacteria 8296963
233 2511105798 2510917015 Bacteria 7950052
234 2599905109 2599185292 Bacteria 6290804
235 2858954477 2858950400 Bacteria 6783797
236 2883581142 2883577096 Bacteria 4709178
237 2887377031 2887375801 Bacteria 5334027
238 2894775043 2894772417 Bacteria 5305674
239 2919177326 2919171160 Bacteria 6499771
240 2929200222 2929199973 Bacteria 7260745
241 2929204445 2929199973 Bacteria 7260745
242 2941484793
243 8055226409 8055225921 Bacteria 3341787
244 8055228677 8055225921 Bacteria 3341787
245 8055910767 8055909800 Bacteria 7278581
246 8055912142 8055909800 Bacteria 7278581
247 Ga0213875_10007451
248 JGI25406J46586_10003239
249 rootH1_10254543
250 Ga0070658_10004412
251 Ga0070676_10364730
252 Ga0070683_100000162
253 Ga0070683_100295786
254 Ga0070680_100000866
255 Ga0070680_100002870
256 Ga0070682_100038292
257 Ga0070682_100389746
258 Ga0070660_100106175
259 Ga0070669_100261420
260 Ga0070671_100010574
261 Ga0070667_100362273
262 Ga0070713_100135338
263 Ga0070678_100104503
264 Ga0070681_10003364
265 Ga0070681_10038928
266 Ga0070681_10278001
267 Ga0070679_100003400
268 Ga0070679_100052994
269 Ga0070679_100108124
270 Ga0070684_100000200
271 Ga0070697_100040051
272 Ga0070665_100059830
273 Ga0070704_100210201
274 Ga0068855_100003176
275 Ga0068855_100010258
276 Ga0068854_100095343
277 Ga0068854_100115799
278 Ga0068859_100254779
279 Ga0068863_100520189
280 Ga0068858_100036709
281 Ga0068858_100051268
282 Ga0081455_10093557
283 Ga0081539_10000101
284 Ga0075364_10132843
285 Ga0075428_100555791
286 Ga0097620_100254796
287 Ga0105240_10006650
288 Ga0105240_10008100
289 Ga0105240_10153462
290 Ga0105247_10022042
291 Ga0114129_10196161
292 Ga0105242_10121119
293 Ga0105238_10004218
294 Ga0105238_10070486
295 Ga0105238_10262884
296 Ga0105147_102479
297 Ga0105239_10072426
298 Ga0105239_10127716
299 Ga0105239_10815247
300 Ga0157370_10002628
301 Ga0157370_10184731
302 Ga0157369_10034834
303 Ga0163162_10020377
304 Ga0157375_10032658
305 Ga0163163_10171921
306 Ga0157376_10192976
307 Ga0163161_10145221
308 Ga0213874_10024613
309 Ga0213875_10002388
310 Ga0213875_10006575
311 Ga0213871_10051907
312 Ga0224572_1001189
313 Ga0224572_1005354
314 Ga0209233_1009469
315 Ga0209233_1013329
316 Ga0207705_10005416
317 Ga0207707_10001191
318 Ga0207707_10002335
319 Ga0207707_10119028
320 Ga0207707_10233286
321 Ga0207695_10015964
322 Ga0207695_10021477
323 Ga0207660_10043772
324 Ga0207657_10519079
325 Ga0207652_10003741
326 Ga0207652_10058951
327 Ga0207652_10220012
328 Ga0207652_10309470
329 Ga0207652_10352895
330 Ga0207681_10284349
331 Ga0207694_10003517
332 Ga0207694_10378900
333 Ga0207700_10217903
334 Ga0207644_10011221
335 Ga0207690_10361780
336 Ga0207686_10118066
337 Ga0207711_10166257
338 Ga0207661_10000041
339 Ga0207667_10006562
340 Ga0207667_10019129
341 Ga0207667_10236552
342 Ga0207712_10282728
343 Ga0207640_10062382
344 Ga0207640_10218115
345 Ga0207658_10028513
346 Ga0207703_10026279
347 Ga0207683_10111849
348 Ga0207698_10414695
349 Ga0268266_10058377
350 Ga0268266_10257579
351 Ga0265334_10015623
352 Ga0265318_10004317
353 Ga0265323_10000271
354 Ga0265336_10000688
355 Ga0265338_10000161
356 Ga0265338_10013575
357 Ga0265324_10009970
358 Ga0265327_10045373
359 Ga0316575_10058158
360 Ga0307412_10000078
361 Ga0307414_10033931
362 Ga0373936_0048763
363 Ga0373927_0000119
364 Ga0373933_0021195
365 Ga0373937_0065679
366 Ga0373925_0001658
367 Ga0373925_0107300
368 Ga0436364_0277048
369 Ga0436364_0553476
370 Ga0436364_0668388
371 Ga0436364_0825323
372 Ga0436364_0937913
373 Ga0436364_1311061
374 Ga0436361_0533119
375 Ga0436363_0428133
376 Ga0436363_0951099
377 Ga0436363_1658342
378 Ga0439436_0012080
379 Ga0466967_0664750
380 Ga0495638_0001075
381 Ga0495651_0036533
382 Ga0495651_0052847
383 Ga0495650_0048508
384 Ga0495605_0008339
385 Ga0495585_0006136
386 Ga0495607_0040020
387 Ga0495628_0155086
388 Ga0495643_0078938
389 Ga0495648_0007816
390 Ga0495642_0006430
391 Ga0495652_0040717
392 Ga0495640_0131415
393 Ga0495645_0120662
394 Ga0495635_0206853
395 Ga0495669_0008600
396 Ga0495670_0031108
397 Ga0495649_0038226
398 Ga0495589_0001480
399 Ga0495600_0124857
400 Ga0495660_0124503
401 Ga0495674_0198590
402 Ga0495680_0222534
403 Ga0495675_0121200
404 Ga0495686_0073872
405 Ga0495602_0092907
406 Ga0495626_0066021
407 Ga0496102_0175730
408 Ga0496102_0654722
409 Ga0496106_0050483
410 Ga0496107_0247643
411 Ga0496110_0132778
412 Ga0496116_0034470
413 Ga0496116_0050326
414 Ga0496117_0002423
415 Ga0496117_0014931
416 Ga0496117_0126553
417 Ga0496118_0000869
418 Ga0496118_0050978
419 Ga0496119_0002076
420 Ga0496119_0048774
421 Ga0496121_0001233
422 Ga0496121_0174548
423 Ga0496123_0055188
424 Ga0496124_0030037
425 Ga0496125_0000023
426 Ga0496125_0103448
427 Ga0496126_0000398
428 Ga0496126_0097980
429 Ga0496126_0473132
430 Ga0501031_0010492
431 Ga0501032_0000026
432 Ga0501032_0002575
433 Ga0501033_0000186
434 Ga0501033_0001729
435 Ga0501033_0256571
436 Ga0501034_0001408
437 Ga0501034_0046820
438 Ga0501036_0000423
439 Ga0501037_0000007
440 Ga0501037_0000032
441 Ga0501037_0023423
442 Ga0501037_0201818
443 Ga0501038_0001651
444 Ga0501038_0094863
445 Ga0501039_0000018
446 Ga0501043_0000061
447 Ga0501043_0000173
448 Ga0501046_0045258
449 Ga0501047_0019024
450 Ga0501047_0175859
451 Ga0501047_0209698
452 Ga0501068_0025823
453 Ga0501069_0001946
454 Ga0501071_0152641
455 Ga0501073_0262669
456 Ga0501074_0010795
457 Ga0501083_0002640
458 Ga0501083_0106606
459 Ga0501035_0000863
460 Ga0501035_0016522
461 Ga0501044_0007190
462 Ga0501044_0014216
463 Ga0501044_0044959
464 Ga0501044_0263790
465 Ga0501044_0439855
466 nmdc:mga00v17_1103_c1
467 nmdc:mga00v17_30302_c1
468 Ga0500572_001842
469 Ga0500618_017224
470 Ga0500559_0009181
471 Ga0500559_0050152
472 Ga0500577_0000282
473 Ga0500639_000012
474 Ga0500596_001279
475 Ga0501082_0014863
476 2501076366
477 2501412957
478 2511100537
479 2511105798
480 2599905109
481 2858954477
482 2883581142
483 2887377031
484 2894775043
485 2919177326
486 2929200222
487 2929204445
488 2941484793
489 8055226409
490 8055228677
491 8055910767
492 8055912142

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14833

NAD_binding_11

NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase

168

289

0.99

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

8

166

0.96

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

8

100

0.92

PF07991

IlvN

Acetohydroxy acid isomeroreductase, NADPH-binding domain

4

130

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cvz-assembly1.cif.gz_D structure of hydroxyisobutyrate dehydrogenase from thermus thermophilus hb8 0.9712 6 296
2cvz-assembly1.cif.gz_D structure of hydroxyisobutyrate dehydrogenase from thermus thermophilus hb8 0.9646 6 296
3q3c-assembly1.cif.gz_A crystal structure of a serine dehydrogenase from pseudomonas aeruginosa pao1 in complex with nad 0.9474 6 287
1vpd-assembly1.cif.gz_A x-ray crystal structure of tartronate semialdehyde reductase [salmonella typhimurium lt2] 0.9395 7 296
3obb-assembly1.cif.gz_A crystal structure of a possible 3-hydroxyisobutyrate dehydrogenase from pseudomonas aeruginosa pao1 0.9385 6 287
ID Description Score Start End Superfamily
1j3vA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9792 6 164 3.40.50.720
5y8iB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9681 5 164 3.40.50.720
1j3vA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9667 6 164 3.40.50.720
af_Q9XTI0_3_164_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9655 8 164 3.40.50.720
1wp4A02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9627 166 296 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A482SHB9-F1-model_v4 deleted 0.9827 58 181
AF-A0A357LR42-F1-model_v4 Oxidoreductase 0.9813 6 161 GO:0016491
GO:0050661
AF-A0A382LZ63-F1-model_v4 3-hydroxyisobutyrate dehydrogenase-like NAD-binding domain-containing protein 0.981 94 296 GO:0050661
GO:0051287
AF-A0A7X6ISJ6-F1-model_v4 deleted 0.9803 63 176
AF-A0A2E4XWM0-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9773 5 296 GO:0016054
GO:0016616
GO:0050661
GO:0051287

Map