F358067

General Info

Members Datasets Scaffolds Average Seq Length
246 172 244 206

Family's Representative Sequence

Representative Sequence 3300006195|Ga0075366_10121846|Ga0075366_101218462
Length 201
Sequence MKTILQLNTSILSGNGESSRLANDFVAQLGADEVIVRDLAAEPVPHLDAERFGAFIAQTKNEKQKQIVAYSDKLIDEIRRADAIVLGLPMYNFGVPSMLKAWFDHIARAGVTFRYTEKGPVGLLTGKKVYVFATRGGYYAGTPADTQTQYVRDFFAFLGITDVEFVYAEGLAIGEASKTASLAKARATLQQLVPQTVAAYA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
84 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
93 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
94 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
95 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
96 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
99 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
100 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
101 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
102 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
103 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
104 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
105 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
108 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
111 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
112 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
113 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
116 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300049128 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
128 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
129 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
130 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 3300049538 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
149 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
157 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
158 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
159 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
160 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
161 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
164 3300059507 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 98R_CW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
165 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
166 3300059624 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 146R_CW_T3_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
167 3300059639 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
168 3300059646 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 42R_SW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
169 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
171 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
172 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.28
Metatranscriptomes 6.91
Isolates 0.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.1
Nodule 0
Rhizoplane 2.85
Rhizosphere 89.84
Stem 0
Stem Tuber 0
Unclassified 1.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3386052 2162886007 Bacteria 2237
2 SwRhRL2b_contig_891574 2162886007 Bacteria 1980
3 Ga0065704_10001104 3300005289 Bacteria 23164
4 Ga0065707_10137023 3300005295 Bacteria 1826
5 Ga0065707_10172629 3300005295 Bacteria 1464
6 Ga0070658_10003940 3300005327 Bacteria 12166
7 Ga0070670_100092632 3300005331 Bacteria 2598
8 Ga0070666_10252929 3300005335 Bacteria 1248
9 Ga0068868_100542589 3300005338 Bacteria 1024
10 Ga0070660_100296486 3300005339 Bacteria 1325
11 Ga0070669_100467923 3300005353 Bacteria 1041
12 Ga0070675_100110878 3300005354 Bacteria 2321
13 Ga0070671_100446626 3300005355 Bacteria 1109
14 Ga0070673_100344119 3300005364 Bacteria 1322
15 Ga0070673_100545229 3300005364 Bacteria 1053
16 Ga0070673_101429991 3300005364 Bacteria 651
17 Ga0070688_100530390 3300005365 Bacteria 892
18 Ga0070667_100069238 3300005367 Bacteria 3003
19 Ga0070667_100782133 3300005367 Bacteria 886
20 Ga0070667_101104038 3300005367 Unclassified 741
21 Ga0070703_10287371 3300005406 Bacteria 681
22 Ga0070714_100013704 3300005435 Bacteria 6502
23 Ga0070705_100032464 3300005440 Bacteria 2901
24 Ga0070694_100006386 3300005444 Bacteria 7152
25 Ga0070694_100295216 3300005444 Bacteria 1240
26 Ga0070694_100378871 3300005444 Bacteria 1103
27 Ga0070708_100077537 3300005445 Bacteria 3003
28 Ga0070678_100297302 3300005456 Bacteria 1371
29 Ga0070678_100382585 3300005456 Bacteria 1218
30 Ga0070706_100170880 3300005467 Bacteria 2030
31 Ga0070706_100437432 3300005467 Bacteria 1217
32 Ga0070698_100046134 3300005471 Bacteria 4456
33 Ga0070698_100271626 3300005471 Bacteria 1627
34 Ga0068853_100143963 3300005539 Bacteria 2141
35 Ga0068853_100420174 3300005539 Bacteria 1254
36 Ga0068853_100570250 3300005539 Bacteria 1073
37 Ga0070672_100525944 3300005543 Bacteria 1025
38 Ga0070695_100036210 3300005545 Bacteria 3104
39 Ga0070695_100321707 3300005545 Bacteria 1150
40 Ga0070696_100427911 3300005546 Bacteria 1041
41 Ga0070693_100011888 3300005547 Bacteria 4392
42 Ga0070704_100048084 3300005549 Bacteria 2984
43 Ga0070704_100048609 3300005549 Bacteria 2970
44 Ga0070704_100105552 3300005549 Bacteria 2133
45 Ga0068857_100083351 3300005577 Bacteria 2856
46 Ga0068857_100136504 3300005577 Bacteria 2215
47 Ga0068852_100000905 3300005616 Bacteria 19632
48 Ga0068852_100608166 3300005616 Bacteria 1098
49 Ga0068852_101096368 3300005616 Bacteria 816
50 Ga0068859_100015682 3300005617 Bacteria 7614
51 Ga0068859_100140050 3300005617 Bacteria 2493
52 Ga0068859_100175218 3300005617 Bacteria 2226
53 Ga0068859_100855113 3300005617 Bacteria 996
54 Ga0068859_101498161 3300005617 Bacteria 745
55 Ga0068864_100047344 3300005618 Bacteria 3692
56 Ga0068866_10085417 3300005718 Bacteria 1705
57 Ga0068861_100805446 3300005719 Bacteria 882
58 Ga0068851_10000871 3300005834 Bacteria 13007
59 Ga0068862_100429747 3300005844 Bacteria 1241
60 Ga0068862_100442295 3300005844 Bacteria 1224
61 Ga0081539_10033460 3300005985 Bacteria 3130
62 Ga0070716_100143872 3300006173 Bacteria 1525
63 Ga0075366_10019246 3300006195 Bacteria 3947
64 Ga0075366_10039953 3300006195 Bacteria 2773
65 Ga0075366_10051894 3300006195 Bacteria 2437
66 Ga0075366_10120433 3300006195 Bacteria 1581
67 Ga0075366_10121846 3300006195 Bacteria 1572
68 Ga0075366_10191519 3300006195 Bacteria 1243
69 Ga0097621_100021769 3300006237 Bacteria 4967
70 Ga0068871_100137346 3300006358 Bacteria 2077
71 Ga0075428_100159962 3300006844 Bacteria 2445
72 Ga0075430_100015901 3300006846 Bacteria 6408
73 Ga0075431_100026064 3300006847 Bacteria 5994
74 Ga0075431_100033683 3300006847 Bacteria 5278
75 Ga0075431_100096189 3300006847 Bacteria 3057
76 Ga0075433_10780714 3300006852 Bacteria 835
77 Ga0075429_100000768 3300006880 Bacteria 25287
78 Ga0097620_100015684 3300006931 Bacteria 7614
79 Ga0097620_100140034 3300006931 Bacteria 2493
80 Ga0097620_100175226 3300006931 Bacteria 2226
81 Ga0097620_100855095 3300006931 Bacteria 996
82 Ga0097620_101498196 3300006931 Bacteria 745
83 Ga0075435_100015373 3300007076 Bacteria 5753
84 Ga0099794_10025468 3300007265 Bacteria 2726
85 Ga0105240_10051723 3300009093 Bacteria 5168
86 Ga0105240_10190923 3300009093 Bacteria 2409
87 Ga0105240_10218827 3300009093 Bacteria 2220
88 Ga0111539_10004167 3300009094 Bacteria 18959
89 Ga0111539_10423063 3300009094 Bacteria 1551
90 Ga0114129_10109084 3300009147 Bacteria 3821
91 Ga0114129_10999669 3300009147 Bacteria 1053
92 Ga0105243_10318649 3300009148 Bacteria 1416
93 Ga0105243_11162458 3300009148 Bacteria 783
94 Ga0105242_10971897 3300009176 Bacteria 855
95 Ga0105249_10219107 3300009553 Bacteria 1872
96 Ga0105249_10576227 3300009553 Bacteria 1178
97 Ga0157370_10020359 3300013104 Bacteria 6627
98 Ga0157374_10109555 3300013296 Bacteria 2655
99 Ga0157379_10301192 3300014968 Bacteria 1461
100 Ga0157376_10256218 3300014969 Bacteria 1637
101 Ga0157376_10319743 3300014969 Bacteria 1475
102 Ga0207656_10036167 3300025321 Bacteria 2071
103 Ga0207653_10277126 3300025885 Bacteria 647
104 Ga0207695_10456473 3300025913 Bacteria 1161
105 Ga0207695_10775207 3300025913 Bacteria 839
106 Ga0207657_10298564 3300025919 Bacteria 1276
107 Ga0207646_10002920 3300025922 Bacteria 19823
108 Ga0207646_10752835 3300025922 Unclassified 869
109 Ga0207681_10102904 3300025923 Bacteria 2063
110 Ga0207659_10108725 3300025926 Bacteria 2104
111 Ga0207664_10059411 3300025929 Bacteria 3044
112 Ga0207706_10100481 3300025933 Bacteria 2545
113 Ga0207709_10943338 3300025935 Bacteria 703
114 Ga0207670_10440680 3300025936 Bacteria 1049
115 Ga0207669_10202840 3300025937 Bacteria 1441
116 Ga0207691_10141216 3300025940 Bacteria 2122
117 Ga0207689_10165466 3300025942 Bacteria 1822
118 Ga0207712_10246418 3300025961 Bacteria 1442
119 Ga0207658_10114951 3300025986 Bacteria 2135
120 Ga0207658_10649699 3300025986 Bacteria 951
121 Ga0207677_10920272 3300026023 Bacteria 789
122 Ga0207703_10424697 3300026035 Bacteria 1237
123 Ga0207675_100456440 3300026118 Bacteria 1267
124 Ga0207683_10288899 3300026121 Bacteria 1499
125 Ga0207683_10342188 3300026121 Bacteria 1372
126 Ga0207698_10682818 3300026142 Bacteria 1020
127 Ga0207698_10941530 3300026142 Bacteria 872
128 Ga0209966_1012327 3300027695 Bacteria 1569
129 Ga0209813_10136058 3300027866 Bacteria 868
130 Ga0209974_10047993 3300027876 Bacteria 1431
131 Ga0207428_10009871 3300027907 Bacteria 8552
132 Ga0268266_10331325 3300028379 Bacteria 1427
133 Ga0268266_10770866 3300028379 Bacteria 929
134 Ga0268265_10400632 3300028380 Bacteria 1268
135 Ga0268265_10422623 3300028380 Bacteria 1238
136 Ga0265320_10020275 3300031240 Bacteria 3607
137 Ga0307509_10000353 3300031507 Bacteria 77017
138 Ga0307408_100476291 3300031548 Bacteria 1088
139 Ga0265313_10137383 3300031595 Bacteria 1054
140 Ga0316579_10006409 3300031691 Bacteria 4805
141 Ga0316579_10068743 3300031691 Bacteria 1675
142 Ga0316576_10014687 3300031727 Bacteria 5236
143 Ga0316576_10056062 3300031727 Bacteria 2877
144 Ga0316578_10021272 3300031728 Bacteria 3599
145 Ga0316577_10008044 3300031733 Bacteria 5638
146 Ga0307406_10553342 3300031901 Bacteria 942
147 Ga0307416_101402685 3300032002 Bacteria 804
148 Ga0316583_10011664 3300032133 Bacteria 3170
149 Ga0316583_10046124 3300032133 Bacteria 1538
150 Ga0316580_10002510 3300032139 Bacteria 5062
151 Ga0373943_0218822 3300035170 Bacteria 1060
152 Ga0373961_0050404 3300035241 Bacteria 1233
153 Ga0316574_0002937 3300035398 Bacteria 8677
154 Ga0316574_0008246 3300035398 Bacteria 5774
155 Ga0373924_0050510 3300035410 Bacteria 1722
156 Ga0373931_0210381 3300035691 Bacteria 1166
157 Ga0373935_0027349 3300035692 Bacteria 3525
158 Ga0373935_0329681 3300035692 Bacteria 1085
159 Ga0373937_0301260 3300036401 Bacteria 1515
160 Ga0373937_0729674 3300036401 Bacteria 938
161 Ga0316582_0015262 3300036647 Bacteria 4387
162 Ga0316582_0088214 3300036647 Bacteria 2037
163 Ga0316584_0029586 3300036712 Bacteria 4043
164 Ga0373925_0088706 3300037068 Bacteria 2362
165 Ga0395905_0001051 3300037471 Bacteria 34886
166 Ga0316581_0023963 3300037588 Bacteria 1807
167 Ga0439441_001913 3300042001 Bacteria 2848
168 Ga0439444_0042811 3300042437 Bacteria 895
169 Ga0451577_0006251 3300042876 Bacteria 11933
170 Ga0451577_0489940 3300042876 Bacteria 1116
171 Ga0451577_0855036 3300042876 Bacteria 820
172 Ga0453683_0078209 3300044673 Bacteria 2071
173 Ga0453683_0201178 3300044673 Bacteria 1265
174 Ga0453683_0243085 3300044673 Bacteria 1147
175 Ga0466966_0020186 3300044684 Bacteria 4386
176 Ga0453684_0287105 3300044712 Bacteria 1874
177 Ga0451576_0129557 3300045051 Bacteria 2629
178 Ga0451576_0249233 3300045051 Bacteria 1856
179 Ga0451576_0266911 3300045051 Bacteria 1789
180 Ga0495606_0007310 3300046507 Bacteria 9940
181 Ga0495621_0001875 3300046539 Bacteria 5524
182 Ga0496104_0125823 3300048907 Bacteria 2461
183 Ga0496107_0294020 3300048910 Bacteria 1209
184 Ga0496110_0422395 3300048913 Bacteria 1215
185 Ga0496112_0431623 3300048915 Bacteria 1256
186 Ga0496112_0672030 3300048915 Bacteria 965
187 Ga0496114_0288332 3300048917 Bacteria 1448
188 Ga0496115_0260816 3300048918 Bacteria 1425
189 Ga0501308_013357 3300049128 Bacteria 949
190 Ga0501310_011605 3300049130 Bacteria 999
191 Ga0501305_003302 3300049161 Bacteria 1818
192 Ga0501305_016622 3300049161 Bacteria 1051
193 Ga0501305_017354 3300049161 Bacteria 1034
194 Ga0501305_017988 3300049161 Bacteria 1020
195 Ga0501312_015915 3300049528 Bacteria 1071
196 Ga0501312_018279 3300049528 Bacteria 1019
197 Ga0501312_020685 3300049528 Bacteria 975
198 Ga0501322_008342 3300049538 Bacteria 768
199 Ga0501037_0650795 3300049573 Bacteria 704
200 Ga0501038_0048868 3300049574 Bacteria 3660
201 Ga0501039_0040895 3300049575 Bacteria 3579
202 Ga0501042_0018686 3300049578 Bacteria 4803
203 Ga0501046_0148246 3300049580 Bacteria 1771
204 Ga0501046_0420340 3300049580 Unclassified 964
205 Ga0501047_0223635 3300049581 Unclassified 1738
206 Ga0501048_0176032 3300049582 Bacteria 1516
207 Ga0501071_0005602 3300049587 Bacteria 8095
208 Ga0501072_0042184 3300049588 Bacteria 3584
209 Ga0501074_0163871 3300049590 Bacteria 1587
210 Ga0501075_0005333 3300049591 Bacteria 8794
211 Ga0501076_0000306 3300049592 Bacteria 30655
212 Ga0501079_0006897 3300049741 Bacteria 8558
213 Ga0501080_0016080 3300049742 Bacteria 6907
214 Ga0501080_0696612 3300049742 Bacteria 896
215 Ga0501035_0290139 3300049822 Bacteria 1381
216 Ga0501035_0443690 3300049822 Bacteria 1074
217 Ga0501045_0001523 3300049824 Bacteria 15428
218 nmdc:mga00v17_247146_c1 3300050491 Bacteria 1157
219 nmdc:mga0k408_14779_c1 3300050493 Bacteria 4308
220 nmdc:mga0k408_168522_c1 3300050493 Bacteria 1305
221 nmdc:mga05p37_2602_c1 3300050507 Bacteria 21010
222 nmdc:mga09592_1721_c1 3300050508 Bacteria 17613
223 nmdc:mga0qj67_850389_c1 3300050509 Bacteria 721
224 nmdc:mga06r32_27192_c1 3300050510 Bacteria 5341
225 nmdc:mga06r32_70234_c1 3300050510 Bacteria 3386
226 nmdc:mga08y16_138584_c1 3300050511 Bacteria 2529
227 nmdc:mga08y16_9715_c1 3300050511 Bacteria 10100
228 nmdc:mga0rr50_42946_c1 3300050513 Bacteria 3305
229 nmdc:mga0a205_25006_c1 3300050515 Bacteria 5685
230 Ga0500641_0090804 3300053096 Bacteria 1304
231 Ga0500607_007357 3300053121 Bacteria 6822
232 Ga0500559_0040286 3300053136 Bacteria 2034
233 Ga0500636_0000046 3300053177 Bacteria 63059
234 Ga0500637_0017310 3300053178 Bacteria 3856
235 Ga0501084_0033781 3300054114 Bacteria 4279
236 Ga0587084_014717 3300059477 Bacteria 1095
237 Ga0587086_027345 3300059507 Bacteria 818
238 Ga0587091_025805 3300059511 Bacteria 1065
239 Ga0587109_031723 3300059624 Bacteria 1006
240 Ga0587062_015378 3300059639 Bacteria 1021
241 Ga0587078_018747 3300059646 Bacteria 859
242 Ga0587111_0020638 3300060346 Bacteria 1262
243 Ga0501082_0168380 3300060353 Bacteria 1904
244 Ga0530510_0000966 3300061734 Bacteria 18983

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049581 Ga0501047_0223635 Ga0501047_0223635_199_750 176
2 3300006195 Ga0075366_10121846 Ga0075366_101218462 194
3 3300006846 Ga0075430_100015901 Ga0075430_1000159013 196
4 3300006847 Ga0075431_100033683 Ga0075431_1000336834 196
5 3300035692 Ga0373935_0027349 Ga0373935_0027349_2518_3117 196
6 3300037068 Ga0373925_0088706 Ga0373925_0088706_1607_2206 196
7 3300050509 nmdc:mga0qj67_850389_c1 nmdc:mga0qj67_850389_c1_61_669 196
8 3300050510 nmdc:mga06r32_70234_c1 nmdc:mga06r32_70234_c1_767_1375 196
9 iso_pu_bacteria 2643221603 2644031522 196
10 iso_pu_bacteria 8001522603 8001525941 196
11 3300005295 Ga0065707_10172629 Ga0065707_101726292 197
12 3300042001 Ga0439441_001913 Ga0439441_001913_185_787 197
13 3300049161 Ga0501305_016622 Ga0501305_016622_15_647 197
14 3300006847 Ga0075431_100096189 Ga0075431_1000961891 198
15 3300046507 Ga0495606_0007310 Ga0495606_0007310_2592_3197 198
16 3300049742 Ga0501080_0696612 Ga0501080_0696612_201_806 198
17 3300005331 Ga0070670_100092632 Ga0070670_1000926323 199
18 3300005335 Ga0070666_10252929 Ga0070666_102529292 199
19 3300005338 Ga0068868_100542589 Ga0068868_1005425891 199
20 3300005339 Ga0070660_100296486 Ga0070660_1002964861 199
21 3300005354 Ga0070675_100110878 Ga0070675_1001108782 199
22 3300005367 Ga0070667_100069238 Ga0070667_1000692382 199
23 3300005406 Ga0070703_10287371 Ga0070703_102873711 199
24 3300005435 Ga0070714_100013704 Ga0070714_1000137043 199
25 3300005444 Ga0070694_100378871 Ga0070694_1003788712 199
26 3300005467 Ga0070706_100170880 Ga0070706_1001708802 199
27 3300005467 Ga0070706_100437432 Ga0070706_1004374322 199
28 3300005539 Ga0068853_100143963 Ga0068853_1001439631 199
29 3300005539 Ga0068853_100420174 Ga0068853_1004201742 199
30 3300005549 Ga0070704_100105552 Ga0070704_1001055521 199
31 3300005577 Ga0068857_100083351 Ga0068857_1000833512 199
32 3300005616 Ga0068852_101096368 Ga0068852_1010963681 199
33 3300005617 Ga0068859_100175218 Ga0068859_1001752182 199
34 3300005844 Ga0068862_100429747 Ga0068862_1004297472 199
35 3300006173 Ga0070716_100143872 Ga0070716_1001438722 199
36 3300006931 Ga0097620_100175226 Ga0097620_1001752262 199
37 3300007076 Ga0075435_100015373 Ga0075435_1000153734 199
38 3300009093 Ga0105240_10051723 Ga0105240_100517235 199
39 3300009093 Ga0105240_10190923 Ga0105240_101909231 199
40 3300009147 Ga0114129_10999669 Ga0114129_109996692 199
41 3300009176 Ga0105242_10971897 Ga0105242_109718971 199
42 3300013104 Ga0157370_10020359 Ga0157370_100203594 199
43 3300013296 Ga0157374_10109555 Ga0157374_101095552 199
44 3300014969 Ga0157376_10319743 Ga0157376_103197432 199
45 3300025885 Ga0207653_10277126 Ga0207653_102771261 199
46 3300025913 Ga0207695_10456473 Ga0207695_104564731 199
47 3300025919 Ga0207657_10298564 Ga0207657_102985641 199
48 3300025922 Ga0207646_10002920 Ga0207646_1000292016 199
49 3300025926 Ga0207659_10108725 Ga0207659_101087252 199
50 3300025929 Ga0207664_10059411 Ga0207664_100594112 199
51 3300025933 Ga0207706_10100481 Ga0207706_101004812 199
52 3300025942 Ga0207689_10165466 Ga0207689_101654662 199
53 3300025986 Ga0207658_10114951 Ga0207658_101149512 199
54 3300026023 Ga0207677_10920272 Ga0207677_109202722 199
55 3300028380 Ga0268265_10400632 Ga0268265_104006322 199
56 3300028380 Ga0268265_10422623 Ga0268265_104226231 199
57 3300042876 Ga0451577_0006251 Ga0451577_0006251_7286_7885 199
58 3300044673 Ga0453683_0078209 Ga0453683_0078209_862_1461 199
59 3300044712 Ga0453684_0287105 Ga0453684_0287105_763_1362 199
60 3300045051 Ga0451576_0249233 Ga0451576_0249233_646_1245 199
61 3300048910 Ga0496107_0294020 Ga0496107_0294020_558_1175 199
62 3300048915 Ga0496112_0431623 Ga0496112_0431623_521_1138 199
63 3300049580 Ga0501046_0420340 Ga0501046_0420340_194_793 199
64 3300049822 Ga0501035_0290139 Ga0501035_0290139_584_1183 199
65 3300050513 nmdc:mga0rr50_42946_c1 nmdc:mga0rr50_42946_c1_1308_1925 199
66 3300050515 nmdc:mga0a205_25006_c1 nmdc:mga0a205_25006_c1_3260_3877 199
67 3300005295 Ga0065707_10137023 Ga0065707_101370232 200
68 3300005327 Ga0070658_10003940 Ga0070658_100039405 200
69 3300005353 Ga0070669_100467923 Ga0070669_1004679232 200
70 3300005355 Ga0070671_100446626 Ga0070671_1004466262 200
71 3300005364 Ga0070673_100344119 Ga0070673_1003441192 200
72 3300005364 Ga0070673_100545229 Ga0070673_1005452292 200
73 3300005364 Ga0070673_101429991 Ga0070673_1014299911 200
74 3300005367 Ga0070667_100782133 Ga0070667_1007821331 200
75 3300005367 Ga0070667_101104038 Ga0070667_1011040381 200
76 3300005444 Ga0070694_100006386 Ga0070694_1000063867 200
77 3300005444 Ga0070694_100295216 Ga0070694_1002952162 200
78 3300005445 Ga0070708_100077537 Ga0070708_1000775373 200
79 3300005456 Ga0070678_100297302 Ga0070678_1002973022 200
80 3300005456 Ga0070678_100382585 Ga0070678_1003825851 200
81 3300005539 Ga0068853_100570250 Ga0068853_1005702501 200
82 3300005543 Ga0070672_100525944 Ga0070672_1005259441 200
83 3300005545 Ga0070695_100036210 Ga0070695_1000362102 200
84 3300005546 Ga0070696_100427911 Ga0070696_1004279112 200
85 3300005547 Ga0070693_100011888 Ga0070693_1000118884 200
86 3300005549 Ga0070704_100048084 Ga0070704_1000480845 200
87 3300005616 Ga0068852_100000905 Ga0068852_10000090519 200
88 3300005616 Ga0068852_100608166 Ga0068852_1006081662 200
89 3300005617 Ga0068859_100140050 Ga0068859_1001400503 200
90 3300005617 Ga0068859_100855113 Ga0068859_1008551132 200
91 3300005617 Ga0068859_101498161 Ga0068859_1014981611 200
92 3300005618 Ga0068864_100047344 Ga0068864_1000473444 200
93 3300005718 Ga0068866_10085417 Ga0068866_100854172 200
94 3300005719 Ga0068861_100805446 Ga0068861_1008054462 200
95 3300005834 Ga0068851_10000871 Ga0068851_100008714 200
96 3300005844 Ga0068862_100442295 Ga0068862_1004422951 200
97 3300005985 Ga0081539_10033460 Ga0081539_100334602 200
98 3300006195 Ga0075366_10019246 Ga0075366_100192462 200
99 3300006195 Ga0075366_10039953 Ga0075366_100399532 200
100 3300006195 Ga0075366_10051894 Ga0075366_100518943 200
101 3300006195 Ga0075366_10120433 Ga0075366_101204331 200
102 3300006195 Ga0075366_10191519 Ga0075366_101915192 200
103 3300006237 Ga0097621_100021769 Ga0097621_1000217696 200
104 3300006358 Ga0068871_100137346 Ga0068871_1001373462 200
105 3300006844 Ga0075428_100159962 Ga0075428_1001599623 200
106 3300006852 Ga0075433_10780714 Ga0075433_107807141 200
107 3300006931 Ga0097620_100140034 Ga0097620_1001400343 200
108 3300006931 Ga0097620_100855095 Ga0097620_1008550952 200
109 3300006931 Ga0097620_101498196 Ga0097620_1014981961 200
110 3300007265 Ga0099794_10025468 Ga0099794_100254683 200
111 3300009093 Ga0105240_10218827 Ga0105240_102188274 200
112 3300009094 Ga0111539_10004167 Ga0111539_100041675 200
113 3300009148 Ga0105243_11162458 Ga0105243_111624581 200
114 3300009553 Ga0105249_10576227 Ga0105249_105762272 200
115 3300014968 Ga0157379_10301192 Ga0157379_103011922 200
116 3300014969 Ga0157376_10256218 Ga0157376_102562181 200
117 3300025321 Ga0207656_10036167 Ga0207656_100361672 200
118 3300025913 Ga0207695_10775207 Ga0207695_107752072 200
119 3300025923 Ga0207681_10102904 Ga0207681_101029043 200
120 3300025935 Ga0207709_10943338 Ga0207709_109433381 200
121 3300025937 Ga0207669_10202840 Ga0207669_102028402 200
122 3300025940 Ga0207691_10141216 Ga0207691_101412162 200
123 3300025986 Ga0207658_10649699 Ga0207658_106496992 200
124 3300026035 Ga0207703_10424697 Ga0207703_104246972 200
125 3300026118 Ga0207675_100456440 Ga0207675_1004564402 200
126 3300026121 Ga0207683_10288899 Ga0207683_102888992 200
127 3300026121 Ga0207683_10342188 Ga0207683_103421881 200
128 3300026142 Ga0207698_10682818 Ga0207698_106828182 200
129 3300026142 Ga0207698_10941530 Ga0207698_109415302 200
130 3300027695 Ga0209966_1012327 Ga0209966_10123272 200
131 3300027866 Ga0209813_10136058 Ga0209813_101360581 200
132 3300027876 Ga0209974_10047993 Ga0209974_100479932 200
133 3300027907 Ga0207428_10009871 Ga0207428_100098712 200
134 3300028379 Ga0268266_10331325 Ga0268266_103313252 200
135 3300028379 Ga0268266_10770866 Ga0268266_107708661 200
136 3300031240 Ga0265320_10020275 Ga0265320_100202757 200
137 3300031507 Ga0307509_10000353 Ga0307509_1000035337 200
138 3300031548 Ga0307408_100476291 Ga0307408_1004762911 200
139 3300031595 Ga0265313_10137383 Ga0265313_101373831 200
140 3300031691 Ga0316579_10006409 Ga0316579_100064095 200
141 3300031691 Ga0316579_10068743 Ga0316579_100687433 200
142 3300031727 Ga0316576_10014687 Ga0316576_100146874 200
143 3300031727 Ga0316576_10056062 Ga0316576_100560624 200
144 3300031728 Ga0316578_10021272 Ga0316578_100212722 200
145 3300031733 Ga0316577_10008044 Ga0316577_100080447 200
146 3300031901 Ga0307406_10553342 Ga0307406_105533422 200
147 3300032002 Ga0307416_101402685 Ga0307416_1014026851 200
148 3300032133 Ga0316583_10011664 Ga0316583_100116644 200
149 3300032133 Ga0316583_10046124 Ga0316583_100461242 200
150 3300032139 Ga0316580_10002510 Ga0316580_100025102 200
151 3300035170 Ga0373943_0218822 Ga0373943_0218822_419_1033 200
152 3300035241 Ga0373961_0050404 Ga0373961_0050404_538_1164 200
153 3300035398 Ga0316574_0002937 Ga0316574_0002937_3733_4335 200
154 3300035398 Ga0316574_0008246 Ga0316574_0008246_3310_3912 200
155 3300035410 Ga0373924_0050510 Ga0373924_0050510_990_1610 200
156 3300035691 Ga0373931_0210381 Ga0373931_0210381_413_1045 200
157 3300035692 Ga0373935_0329681 Ga0373935_0329681_247_906 200
158 3300036401 Ga0373937_0301260 Ga0373937_0301260_76_705 200
159 3300036401 Ga0373937_0729674 Ga0373937_0729674_41_700 200
160 3300036647 Ga0316582_0015262 Ga0316582_0015262_1182_1784 200
161 3300036647 Ga0316582_0088214 Ga0316582_0088214_562_1182 200
162 3300036712 Ga0316584_0029586 Ga0316584_0029586_3037_3639 200
163 3300037471 Ga0395905_0001051 Ga0395905_0001051_27598_28218 200
164 3300037588 Ga0316581_0023963 Ga0316581_0023963_1089_1709 200
165 3300042437 Ga0439444_0042811 Ga0439444_0042811_49_675 200
166 3300042876 Ga0451577_0489940 Ga0451577_0489940_125_751 200
167 3300042876 Ga0451577_0855036 Ga0451577_0855036_49_675 200
168 3300044673 Ga0453683_0201178 Ga0453683_0201178_621_1223 200
169 3300044673 Ga0453683_0243085 Ga0453683_0243085_17_643 200
170 3300044684 Ga0466966_0020186 Ga0466966_0020186_1983_2603 200
171 3300045051 Ga0451576_0129557 Ga0451576_0129557_1308_1910 200
172 3300045051 Ga0451576_0266911 Ga0451576_0266911_847_1473 200
173 3300046539 Ga0495621_0001875 Ga0495621_0001875_569_1201 200
174 3300048907 Ga0496104_0125823 Ga0496104_0125823_1563_2177 200
175 3300048913 Ga0496110_0422395 Ga0496110_0422395_260_874 200
176 3300048915 Ga0496112_0672030 Ga0496112_0672030_308_940 200
177 3300048917 Ga0496114_0288332 Ga0496114_0288332_374_994 200
178 3300048918 Ga0496115_0260816 Ga0496115_0260816_737_1357 200
179 3300049128 Ga0501308_013357 Ga0501308_013357_314_934 200
180 3300049130 Ga0501310_011605 Ga0501310_011605_17_637 200
181 3300049161 Ga0501305_003302 Ga0501305_003302_10_630 200
182 3300049161 Ga0501305_017354 Ga0501305_017354_16_636 200
183 3300049161 Ga0501305_017988 Ga0501305_017988_385_1005 200
184 3300049528 Ga0501312_015915 Ga0501312_015915_85_705 200
185 3300049528 Ga0501312_018279 Ga0501312_018279_384_1004 200
186 3300049528 Ga0501312_020685 Ga0501312_020685_15_635 200
187 3300049538 Ga0501322_008342 Ga0501322_008342_138_758 200
188 3300049574 Ga0501038_0048868 Ga0501038_0048868_1870_2490 200
189 3300049575 Ga0501039_0040895 Ga0501039_0040895_1174_1794 200
190 3300049578 Ga0501042_0018686 Ga0501042_0018686_184_804 200
191 3300049580 Ga0501046_0148246 Ga0501046_0148246_63_683 200
192 3300049582 Ga0501048_0176032 Ga0501048_0176032_728_1348 200
193 3300049587 Ga0501071_0005602 Ga0501071_0005602_6220_6840 200
194 3300049588 Ga0501072_0042184 Ga0501072_0042184_2238_2858 200
195 3300049590 Ga0501074_0163871 Ga0501074_0163871_203_823 200
196 3300049591 Ga0501075_0005333 Ga0501075_0005333_1076_1696 200
197 3300049592 Ga0501076_0000306 Ga0501076_0000306_10470_11090 200
198 3300049741 Ga0501079_0006897 Ga0501079_0006897_114_734 200
199 3300049742 Ga0501080_0016080 Ga0501080_0016080_1213_1833 200
200 3300049822 Ga0501035_0443690 Ga0501035_0443690_88_690 200
201 3300049824 Ga0501045_0001523 Ga0501045_0001523_1751_2371 200
202 3300050491 nmdc:mga00v17_247146_c1 nmdc:mga00v17_247146_c1_64_693 200
203 3300050493 nmdc:mga0k408_14779_c1 nmdc:mga0k408_14779_c1_1455_2147 200
204 3300050493 nmdc:mga0k408_168522_c1 nmdc:mga0k408_168522_c1_239_862 200
205 3300050511 nmdc:mga08y16_9715_c1 nmdc:mga08y16_9715_c1_2014_2640 200
206 3300053096 Ga0500641_0090804 Ga0500641_0090804_126_752 200
207 3300053121 Ga0500607_007357 Ga0500607_007357_2714_3316 200
208 3300053136 Ga0500559_0040286 Ga0500559_0040286_419_1021 200
209 3300053177 Ga0500636_0000046 Ga0500636_0000046_32324_32926 200
210 3300053178 Ga0500637_0017310 Ga0500637_0017310_2718_3344 200
211 3300054114 Ga0501084_0033781 Ga0501084_0033781_1433_2053 200
212 3300059477 Ga0587084_014717 Ga0587084_014717_41_661 200
213 3300059507 Ga0587086_027345 Ga0587086_027345_162_782 200
214 3300059511 Ga0587091_025805 Ga0587091_025805_48_668 200
215 3300059624 Ga0587109_031723 Ga0587109_031723_108_728 200
216 3300059639 Ga0587062_015378 Ga0587062_015378_118_738 200
217 3300059646 Ga0587078_018747 Ga0587078_018747_17_637 200
218 3300060346 Ga0587111_0020638 Ga0587111_0020638_559_1179 200
219 3300060353 Ga0501082_0168380 Ga0501082_0168380_974_1594 200
220 3300061734 Ga0530510_0000966 Ga0530510_0000966_4911_5531 200
221 3300005440 Ga0070705_100032464 Ga0070705_1000324642 201
222 3300005471 Ga0070698_100046134 Ga0070698_1000461342 201
223 3300005471 Ga0070698_100271626 Ga0070698_1002716262 201
224 3300005549 Ga0070704_100048609 Ga0070704_1000486092 201
225 3300006847 Ga0075431_100026064 Ga0075431_1000260645 201
226 3300006880 Ga0075429_100000768 Ga0075429_10000076822 201
227 3300009147 Ga0114129_10109084 Ga0114129_101090845 201
228 3300009148 Ga0105243_10318649 Ga0105243_103186492 201
229 3300025922 Ga0207646_10752835 Ga0207646_107528352 201
230 3300050507 nmdc:mga05p37_2602_c1 nmdc:mga05p37_2602_c1_12486_13202 201
231 3300050508 nmdc:mga09592_1721_c1 nmdc:mga09592_1721_c1_15567_16283 201
232 3300050510 nmdc:mga06r32_27192_c1 nmdc:mga06r32_27192_c1_449_1165 201
233 3300005365 Ga0070688_100530390 Ga0070688_1005303902 202
234 3300005545 Ga0070695_100321707 Ga0070695_1003217072 202
235 3300005577 Ga0068857_100136504 Ga0068857_1001365042 202
236 3300005617 Ga0068859_100015682 Ga0068859_1000156821 202
237 3300006931 Ga0097620_100015684 Ga0097620_1000156841 202
238 3300009094 Ga0111539_10423063 Ga0111539_104230632 202
239 3300009553 Ga0105249_10219107 Ga0105249_102191073 202
240 3300025936 Ga0207670_10440680 Ga0207670_104406801 202
241 3300025961 Ga0207712_10246418 Ga0207712_102464182 202
242 3300049573 Ga0501037_0650795 Ga0501037_0650795_43_657 202
243 3300050511 nmdc:mga08y16_138584_c1 nmdc:mga08y16_138584_c1_1823_2455 202
244 2162886007 SwRhRL2b_contig_3386052 SwRhRL2b_0831.00003930 206
245 2162886007 SwRhRL2b_contig_891574 SwRhRL2b_0188.00006670 206
246 3300005289 Ga0065704_10001104 Ga0065704_1000110416 206

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02525

Flavodoxin_2

Flavodoxin-like fold

2

193

0.91

PF03358

FMN_red

NADPH-dependent FMN reductase

4

170

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
2z98-assembly1.cif.gz_A-2 the crystal structure of azor (azoreductase) from escherichia coli: oxidized azor in tetragonal crystals (the resolution has improved from 1.8 (1v4b) to 1.4 angstrom) 0.9284 4 205
2z98-assembly1.cif.gz_A-2 the crystal structure of azor (azoreductase) from escherichia coli: oxidized azor in tetragonal crystals (the resolution has improved from 1.8 (1v4b) to 1.4 angstrom) 0.9148 4 205
2z9c-assembly1.cif.gz_A-2 the crystal structure of azor (azoreductase) from escherichia coli: azor in complex with dicoumarol 0.9146 4 205
2z9b-assembly1.cif.gz_A-2 the crystal structure of azor (azoreductase) from escherichia coli: reduced azor in tetragonal crystals 0.9101 4 205
1t5b-assembly1.cif.gz_B structural genomics, a protein from salmonella typhimurium similar to e. coli acyl carrier protein phosphodiesterase 0.9081 4 205
ID Description Score Start End Superfamily
1tikA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.8988 2 205 3.40.50.360
4c0wA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.8896 4 202 3.40.50.360
1tikA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.8821 2 205 3.40.50.360
6dxpB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.8781 3 205 3.40.50.360
3lt5B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.8709 4 205 3.40.50.360
ID Description Score Start End GO Terms
AF-A0A2P5K920-F1-model_v4 FMN dependent NADH:quinone oxidoreductase (EC 1.6.5.-) (Azo-dye reductase) (FMN-dependent NADH-azo compound oxidoreductase) (FMN-dependent NADH-azoreductase) (EC 1.7.1.17) 0.9629 4 203 GO:0009055
GO:0010181
GO:0016652
GO:0016655
AF-A0A7G2S6A7-F1-model_v4 FMN dependent NADH:quinone oxidoreductase (EC 1.6.5.-) (Azo-dye reductase) (FMN-dependent NADH-azo compound oxidoreductase) (FMN-dependent NADH-azoreductase) (EC 1.7.1.17) 0.9628 4 201 GO:0009055
GO:0010181
GO:0016652
GO:0016655
AF-A0A069PG89-F1-model_v4 FMN dependent NADH:quinone oxidoreductase (EC 1.6.5.-) (Azo-dye reductase) (FMN-dependent NADH-azo compound oxidoreductase) (FMN-dependent NADH-azoreductase) (EC 1.7.1.17) 0.9613 4 203 GO:0009055
GO:0010181
GO:0016652
GO:0016655
AF-A0A2S5DY39-F1-model_v4 FMN dependent NADH:quinone oxidoreductase (EC 1.6.5.-) (Azo-dye reductase) (FMN-dependent NADH-azo compound oxidoreductase) (FMN-dependent NADH-azoreductase) (EC 1.7.1.17) 0.9612 4 203 GO:0009055
GO:0010181
GO:0016652
GO:0016655
AF-A0A6N7LPF9-F1-model_v4 FMN dependent NADH:quinone oxidoreductase (EC 1.6.5.-) (Azo-dye reductase) (FMN-dependent NADH-azo compound oxidoreductase) (FMN-dependent NADH-azoreductase) (EC 1.7.1.17) 0.9611 4 201 GO:0009055
GO:0010181
GO:0016652
GO:0016655

Feature Viewer

pLDDT pTM Quality
96.42 0.92 High
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Predicted Structure (AlphaFold2)

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