F357152

General Info

Members Datasets Scaffolds Average Seq Length
245 207 490 358

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100026098|Ga0070708_1000260986
Length 396
Sequence MKVLVTGGAGFIGTWLVAKLPADTDIVIVDCLDEQVHGGSREVPPVLARADFIRADIRDTHLYASAAEGADVVVHLAAQTGTGQSMYETSRYLQHNVYGTERLLELIGSLKRSVRRIILASSRAVYGEGSYGDTTEPFAGAGRRLSDLRAGRWAVRGPDGKDLTALPMREDHATRPTSVYGLTKLRQEKLVESFARSTGLDFLVLRLQNVYGPGQALGNPYAGIVGIFVDAVAREQTIDLFEDGEITRDFVYVEDVADALLRAICHPEPLGVVLNCGSGIATTLRKLLGQIEVVVGKKSETRCPGTFRIGDVRHAVADMQRYRQVFGSWTPTDLDTGLRRYLDWYLSQPQVRRTSVRRAAAELEEHGLLGYASPGTAQAALVVPAEDRQASRPCRA

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
3 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
20 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
43 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
50 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
51 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
52 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
53 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
57 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
62 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
63 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
64 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
65 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
66 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
67 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
68 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
69 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
70 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
71 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
72 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
73 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
74 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
75 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
76 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
77 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
78 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
79 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
80 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
81 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
82 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
83 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
84 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
85 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
86 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
89 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
93 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
94 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
95 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
96 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
97 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
98 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
99 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
100 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
101 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
102 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
103 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
104 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
105 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
106 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
110 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
116 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
117 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
118 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
119 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
120 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
154 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
155 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
156 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
157 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
158 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
159 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
160 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
161 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
162 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
163 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
164 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
165 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
166 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
167 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
168 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
169 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
170 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
171 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
172 2588253730 Mesorhizobium huakuii 7653R Isolate Rhizosphere
173 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
174 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
175 2643221649 Leifsonia sp. Root4 Isolate Unclassified
176 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
177 2687453392 Mesorhizobium ciceri biserrulae WSM1284 Isolate Unclassified
178 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
179 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
180 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
181 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
182 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
183 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
184 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
185 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
186 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
187 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
188 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
189 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
190 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
191 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
192 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
193 2924733363 Mesorhizobium sp. M7A.F.Ca.US.011.01.1.1 Isolate Nodule
194 2928108538 Paraburkholderia terricola 1595 Isolate Rhizosphere
195 2928135762 Paraburkholderia terricola 1988 Isolate Unclassified
196 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
197 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
198 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
199 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
200 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
201 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
202 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
203 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
204 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
205 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
206 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
207 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.49
Metatranscriptomes 0
Isolates 15.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.24
Nodule 4.9
Rhizoplane 8.57
Rhizosphere 59.18
Stem 0
Stem Tuber 0
Unclassified 0.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100026098 3300005445 Bacteria 4998
2 Ga0055542_1001081 3300003762 Bacteria 16610
3 Ga0055529_1003245 3300003763 Bacteria 2757
4 Ga0070658_10203041 3300005327 Bacteria 1673
5 Ga0070668_100006222 3300005347 Bacteria 8843
6 Ga0070667_100001187 3300005367 Bacteria 23675
7 Ga0070714_100023672 3300005435 Bacteria 5049
8 Ga0070678_100027337 3300005456 Bacteria 3873
9 Ga0068853_100016717 3300005539 Bacteria 6041
10 Ga0070665_100000108 3300005548 Bacteria 155204
11 Ga0070665_100336506 3300005548 Bacteria 1514
12 Ga0070664_100267529 3300005564 Bacteria 1539
13 Ga0068863_100002820 3300005841 Bacteria 17212
14 Ga0068863_100003965 3300005841 Bacteria 14619
15 Ga0068860_100004665 3300005843 Bacteria 13989
16 Ga0068860_100154239 3300005843 Bacteria 2213
17 Ga0068862_100007607 3300005844 Bacteria 8975
18 Ga0081455_10042496 3300005937 Bacteria 3986
19 Ga0075365_10004945 3300006038 Bacteria 7132
20 Ga0075365_10064573 3300006038 Bacteria 2453
21 Ga0075363_100023274 3300006048 Bacteria 3137
22 Ga0075364_10004051 3300006051 Bacteria 8418
23 Ga0075364_10006660 3300006051 Bacteria 6810
24 Ga0075432_10004556 3300006058 Bacteria 4717
25 Ga0070716_100045219 3300006173 Bacteria 2471
26 Ga0075367_10026501 3300006178 Bacteria 3289
27 Ga0075369_10005944 3300006186 Bacteria 4591
28 Ga0075366_10001755 3300006195 Bacteria 10915
29 Ga0075370_10000708 3300006353 Bacteria 13185
30 Ga0075431_100207348 3300006847 Bacteria 2003
31 Ga0111539_10518393 3300009094 Bacteria 1389
32 Ga0105248_10012347 3300009177 Bacteria 9426
33 Ga0105248_10059854 3300009177 Bacteria 4278
34 Ga0105237_10045055 3300009545 Bacteria 4441
35 Ga0105239_10052407 3300010375 Bacteria 4474
36 Ga0105239_10238731 3300010375 Bacteria 2040
37 Ga0157369_10033113 3300013105 Bacteria 5681
38 Ga0157374_10076556 3300013296 Bacteria 3164
39 Ga0157375_10238552 3300013308 Bacteria 1978
40 Ga0163161_10074832 3300017792 Bacteria 2484
41 Ga0213876_10000889 3300021384 Bacteria 19999
42 Ga0209148_1000057 3300025254 Bacteria 360463
43 Ga0209455_1000939 3300025272 Bacteria 14926
44 Ga0207671_10069985 3300025914 Bacteria 2615
45 Ga0207664_10028042 3300025929 Bacteria 4276
46 Ga0207658_10000967 3300025986 Bacteria 23707
47 Ga0207658_10243627 3300025986 Bacteria 1524
48 Ga0207641_10001414 3300026088 Bacteria 23667
49 Ga0207641_10002153 3300026088 Bacteria 18557
50 Ga0207683_10264091 3300026121 Bacteria 1572
51 Ga0207428_10094371 3300027907 Bacteria 2319
52 Ga0268266_10000001 3300028379 Bacteria 4040580
53 Ga0268266_10170872 3300028379 Bacteria 1973
54 Ga0268265_10095137 3300028380 Unclassified 2391
55 Ga0268264_10003279 3300028381 Bacteria 13994
56 Ga0265327_10001959 3300031251 Bacteria 23574
57 Ga0307513_10321967 3300031456 Bacteria 1304
58 Ga0307408_100009263 3300031548 Bacteria 6491
59 Ga0307405_10007591 3300031731 Bacteria 5438
60 Ga0307413_10018982 3300031824 Bacteria 3621
61 Ga0307410_10000589 3300031852 Bacteria 14976
62 Ga0307407_10129803 3300031903 Bacteria 1610
63 Ga0307412_10001061 3300031911 Bacteria 15719
64 Ga0307412_10137643 3300031911 Bacteria 1784
65 Ga0307409_100048253 3300031995 Bacteria 3238
66 Ga0307416_100053919 3300032002 Bacteria 3229
67 Ga0307416_100083104 3300032002 Bacteria 2715
68 Ga0307414_10012670 3300032004 Bacteria 4998
69 Ga0307414_10025252 3300032004 Bacteria 3803
70 Ga0307411_10025823 3300032005 Bacteria 3526
71 Ga0307415_100008038 3300032126 Bacteria 5821
72 Ga0307415_100193731 3300032126 Bacteria 1606
73 Ga0316584_0038607 3300036712 Bacteria 3553
74 Ga0395898_0032961 3300037466 Bacteria 5171
75 Ga0436365_1849791 3300039437 Bacteria 109940
76 Ga0439436_0023236 3300041404 Bacteria 1834
77 Ga0439466_0010886 3300041411 Bacteria 3372
78 Ga0439465_0018863 3300041413 Bacteria 2156
79 Ga0451793_0021408 3300041452 Bacteria 6500
80 Ga0451833_0312680 3300041491 Bacteria 11806
81 Ga0451835_0774362 3300041492 Bacteria 9592
82 Ga0451837_0062734 3300041494 Bacteria 11592
83 Ga0451839_0566786 3300041496 Bacteria 13040
84 Ga0451841_0631423 3300041498 Bacteria 12892
85 Ga0451847_0366749 3300041503 Bacteria 7122
86 Ga0451849_0060357 3300041505 Bacteria 6380
87 Ga0451851_0097239 3300041507 Bacteria 6392
88 Ga0451843_0240840 3300041509 Bacteria 13553
89 Ga0451855_1622642 3300041511 Bacteria 1673
90 Ga0451853_0575940 3300041512 Bacteria 13392
91 Ga0439433_0002889 3300041999 Bacteria 3674
92 Ga0439442_000001 3300042002 Bacteria 161142
93 Ga0439442_017070 3300042002 Bacteria 1497
94 Ga0439432_009540 3300042006 Bacteria 3380
95 Ga0439449_0003013 3300042007 Bacteria 6575
96 Ga0439457_030356 3300042014 Bacteria 1198
97 Ga0450920_000059 3300042122 Bacteria 14165
98 Ga0450907_000102 3300042146 Bacteria 32710
99 Ga0439434_0000022 3300042435 Bacteria 37374
100 Ga0450918_000253 3300042531 Bacteria 12080
101 Ga0466972_0000643 3300044658 Bacteria 16862
102 Ga0466961_0079487 3300044693 Bacteria 2076
103 Ga0466963_0046213 3300044694 Bacteria 2870
104 Ga0466963_0106780 3300044694 Bacteria 1920
105 Ga0466968_0001044 3300044735 Bacteria 9803
106 Ga0466970_0000295 3300044765 Bacteria 24363
107 Ga0466959_0004228 3300045049 Bacteria 9575
108 Ga0466958_0004696 3300045836 Bacteria 7252
109 Ga0466958_0103884 3300045836 Bacteria 1769
110 Ga0495629_0077323 3300046459 Bacteria 2323
111 Ga0495638_0001207 3300046460 Bacteria 24665
112 Ga0495638_0132465 3300046460 Bacteria 1463
113 Ga0495580_0007029 3300046472 Bacteria 9077
114 Ga0495582_0041799 3300046473 Bacteria 2526
115 Ga0495639_0001219 3300046475 Bacteria 11589
116 Ga0495665_0119804 3300046531 Bacteria 1378
117 Ga0495586_0001724 3300046535 Bacteria 11939
118 Ga0495645_0251342 3300046543 Bacteria 1175
119 Ga0495633_0003118 3300046558 Bacteria 11234
120 Ga0495588_0004503 3300046674 Bacteria 6160
121 Ga0495581_0001814 3300047315 Bacteria 11948
122 Ga0495593_0015855 3300047673 Bacteria 4258
123 Ga0496100_0002207 3300048903 Bacteria 9827
124 Ga0496101_0003974 3300048904 Bacteria 9254
125 Ga0496104_0002447 3300048907 Bacteria 15987
126 Ga0496104_0030468 3300048907 Bacteria 5013
127 Ga0496104_0055610 3300048907 Bacteria 3742
128 Ga0496105_0085787 3300048908 Bacteria 2601
129 Ga0496105_0090207 3300048908 Bacteria 2532
130 Ga0496106_0004451 3300048909 Bacteria 10388
131 Ga0496107_0028173 3300048910 Bacteria 3991
132 Ga0496111_0091287 3300048914 Bacteria 2232
133 Ga0496112_0001097 3300048915 Bacteria 20038
134 Ga0496112_0002750 3300048915 Bacteria 14255
135 Ga0496113_0002851 3300048916 Bacteria 10169
136 Ga0496113_0007001 3300048916 Bacteria 7212
137 Ga0496114_0004993 3300048917 Bacteria 10351
138 Ga0496114_0029307 3300048917 Bacteria 4522
139 Ga0496115_0003997 3300048918 Bacteria 10640
140 Ga0496117_0099439 3300048920 Bacteria 1845
141 Ga0496119_0018843 3300048922 Bacteria 5114
142 Ga0496122_0000226 3300048925 Bacteria 125821
143 Ga0496122_0000534 3300048925 Bacteria 78704
144 Ga0496123_0000142 3300048926 Bacteria 146932
145 Ga0496124_0000131 3300048927 Bacteria 156256
146 Ga0496124_0111924 3300048927 Bacteria 2196
147 Ga0496126_0005448 3300048929 Bacteria 14515
148 Ga0501031_0001334 3300049568 Bacteria 15194
149 Ga0501032_0004723 3300049569 Bacteria 10224
150 Ga0501033_0004138 3300049570 Bacteria 11684
151 Ga0501034_0010013 3300049571 Bacteria 9903
152 Ga0501036_0004168 3300049572 Bacteria 11640
153 Ga0501037_0003462 3300049573 Bacteria 11457
154 Ga0501038_0001529 3300049574 Bacteria 21336
155 Ga0501038_0005350 3300049574 Bacteria 11922
156 Ga0501039_0005049 3300049575 Bacteria 10005
157 Ga0501039_0018393 3300049575 Bacteria 5363
158 Ga0501042_0058586 3300049578 Bacteria 2749
159 Ga0501043_0001879 3300049579 Bacteria 18000
160 Ga0501046_0004022 3300049580 Bacteria 13427
161 Ga0501047_0009142 3300049581 Bacteria 9354
162 Ga0501047_0247450 3300049581 Bacteria 1632
163 Ga0501048_0003812 3300049582 Bacteria 11500
164 Ga0501067_0000821 3300049583 Bacteria 16768
165 Ga0501068_0000414 3300049584 Bacteria 21613
166 Ga0501069_0001962 3300049585 Bacteria 10270
167 Ga0501070_0000050 3300049586 Bacteria 103310
168 Ga0501070_0005158 3300049586 Bacteria 11136
169 Ga0501070_0085839 3300049586 Bacteria 2606
170 Ga0501071_0001023 3300049587 Bacteria 15424
171 Ga0501072_0062768 3300049588 Bacteria 2930
172 Ga0501073_0005149 3300049589 Bacteria 9811
173 Ga0501074_0004808 3300049590 Bacteria 9685
174 Ga0501074_0068459 3300049590 Bacteria 2552
175 Ga0501075_0235700 3300049591 Bacteria 1395
176 Ga0501077_0112073 3300049593 Bacteria 1729
177 Ga0501079_0003168 3300049741 Bacteria 12050
178 Ga0501080_0015212 3300049742 Bacteria 7091
179 Ga0501083_0022323 3300049744 Bacteria 4393
180 Ga0501035_0005738 3300049822 Bacteria 11710
181 Ga0501035_0053353 3300049822 Bacteria 3616
182 Ga0501035_0119060 3300049822 Bacteria 2310
183 Ga0501044_0011429 3300049823 Bacteria 9618
184 Ga0501044_0163225 3300049823 Unclassified 2203
185 Ga0501045_0003055 3300049824 Bacteria 11448
186 nmdc:mga03n38_1363_c1 3300050490 Bacteria 6921
187 nmdc:mga00v17_19344_c1 3300050491 Bacteria 3886
188 nmdc:mga00v17_3661_c1 3300050491 Bacteria 7941
189 nmdc:mga0yw44_51960_c1 3300050492 Bacteria 2483
190 nmdc:mga0yw44_64394_c1 3300050492 Bacteria 2256
191 nmdc:mga0k408_17404_c1 3300050493 Bacteria 4005
192 nmdc:mga06z11_65249_c1 3300050494 Bacteria 1910
193 nmdc:mga07m45_2051_c1 3300050496 Bacteria 9355
194 nmdc:mga0qj67_50935_c1 3300050509 Bacteria 3273
195 nmdc:mga06r32_172106_c1 3300050510 Bacteria 2149
196 Ga0500643_000209 3300053087 Bacteria 55415
197 Ga0500652_000589 3300053131 Bacteria 12654
198 Ga0500658_0077002 3300053134 Bacteria 1419
199 Ga0500568_0002074 3300053139 Bacteria 12154
200 Ga0500604_0001539 3300053151 Bacteria 6451
201 Ga0500604_0008340 3300053151 Bacteria 2748
202 Ga0500620_000929 3300053155 Bacteria 5094
203 Ga0500627_0005507 3300053158 Bacteria 4210
204 Ga0500645_000108 3300053730 Bacteria 66421
205 Ga0501084_0032592 3300054114 Bacteria 4358
206 Ga0501082_0006626 3300060353 Bacteria 10019
207 Ga0466962_0016751 3300061719 Bacteria 3533
208 2509118138 2508501123 Bacteria 6283661
209 2512929572 2512875016 Bacteria 6529530
210 2588515144 2588253730 Bacteria 6881675
211 2599742745 2599185240 Bacteria 7968121
212 2600204863 2599185355 Bacteria 7968906
213 2644277589 2643221649 Bacteria 3867359
214 2676741852 2675903129 Bacteria 7964495
215 2688600363 2687453392 Bacteria 6880454
216 2738707954 2738541274 Bacteria 6909446
217 2739333294 2738543028 Bacteria 6917070
218 2756673073 2756170246 Bacteria 7451806
219 2808891899 2808606370 Bacteria 4942454
220 2852646282 2852643534 Bacteria 3013378
221 2874174220 2874168670 Bacteria 8062617
222 2876366868 2876363079 Bacteria 6544991
223 2876811187 2876808645 Bacteria 8824342
224 2879114858 2879110137 Bacteria 8907982
225 2902801912 2902799365 Bacteria 5419524
226 2903453667 2903448605 Bacteria 7357801
227 2903524735 2903521522 Bacteria 6525694
228 2903531022 2903528002 Bacteria 6586099
229 2904117191 2904113452 Bacteria 7796941
230 2909075919 2909074476 Bacteria 3436050
231 2924736060 2924733363 Bacteria 7574837
232 2928110427 2928108538 Bacteria 7360024
233 2928138440 2928135762 Bacteria 7259641
234 2937850621 2937848649 Bacteria 6983481
235 2945918331 2945916053 Bacteria 4555517
236 2946005325 2946003308 Bacteria 3857229
237 2953999653 2953998280 Bacteria 4812144
238 2958065521 2958064165 Bacteria 7158582
239 2963649661 2963644680 Bacteria 6530403
240 2968087031 2968083720 Bacteria 7351627
241 2977927690 2977922695 Bacteria 6956781
242 2977989873 2977986579 Bacteria 6581278
243 637079320 637000159 Bacteria 7596297
244 8006994444 8006994254 Bacteria 8309700
245 8055040543 8055037949 Bacteria 3337834
246 Ga0070708_100026098
247 Ga0055542_1001081
248 Ga0055529_1003245
249 Ga0070658_10203041
250 Ga0070668_100006222
251 Ga0070667_100001187
252 Ga0070714_100023672
253 Ga0070678_100027337
254 Ga0068853_100016717
255 Ga0070665_100000108
256 Ga0070665_100336506
257 Ga0070664_100267529
258 Ga0068863_100002820
259 Ga0068863_100003965
260 Ga0068860_100004665
261 Ga0068860_100154239
262 Ga0068862_100007607
263 Ga0081455_10042496
264 Ga0075365_10004945
265 Ga0075365_10064573
266 Ga0075363_100023274
267 Ga0075364_10004051
268 Ga0075364_10006660
269 Ga0075432_10004556
270 Ga0070716_100045219
271 Ga0075367_10026501
272 Ga0075369_10005944
273 Ga0075366_10001755
274 Ga0075370_10000708
275 Ga0075431_100207348
276 Ga0111539_10518393
277 Ga0105248_10012347
278 Ga0105248_10059854
279 Ga0105237_10045055
280 Ga0105239_10052407
281 Ga0105239_10238731
282 Ga0157369_10033113
283 Ga0157374_10076556
284 Ga0157375_10238552
285 Ga0163161_10074832
286 Ga0213876_10000889
287 Ga0209148_1000057
288 Ga0209455_1000939
289 Ga0207671_10069985
290 Ga0207664_10028042
291 Ga0207658_10000967
292 Ga0207658_10243627
293 Ga0207641_10001414
294 Ga0207641_10002153
295 Ga0207683_10264091
296 Ga0207428_10094371
297 Ga0268266_10000001
298 Ga0268266_10170872
299 Ga0268265_10095137
300 Ga0268264_10003279
301 Ga0265327_10001959
302 Ga0307513_10321967
303 Ga0307408_100009263
304 Ga0307405_10007591
305 Ga0307413_10018982
306 Ga0307410_10000589
307 Ga0307407_10129803
308 Ga0307412_10001061
309 Ga0307412_10137643
310 Ga0307409_100048253
311 Ga0307416_100053919
312 Ga0307416_100083104
313 Ga0307414_10012670
314 Ga0307414_10025252
315 Ga0307411_10025823
316 Ga0307415_100008038
317 Ga0307415_100193731
318 Ga0316584_0038607
319 Ga0395898_0032961
320 Ga0436365_1849791
321 Ga0439436_0023236
322 Ga0439466_0010886
323 Ga0439465_0018863
324 Ga0451793_0021408
325 Ga0451833_0312680
326 Ga0451835_0774362
327 Ga0451837_0062734
328 Ga0451839_0566786
329 Ga0451841_0631423
330 Ga0451847_0366749
331 Ga0451849_0060357
332 Ga0451851_0097239
333 Ga0451843_0240840
334 Ga0451855_1622642
335 Ga0451853_0575940
336 Ga0439433_0002889
337 Ga0439442_000001
338 Ga0439442_017070
339 Ga0439432_009540
340 Ga0439449_0003013
341 Ga0439457_030356
342 Ga0450920_000059
343 Ga0450907_000102
344 Ga0439434_0000022
345 Ga0450918_000253
346 Ga0466972_0000643
347 Ga0466961_0079487
348 Ga0466963_0046213
349 Ga0466963_0106780
350 Ga0466968_0001044
351 Ga0466970_0000295
352 Ga0466959_0004228
353 Ga0466958_0004696
354 Ga0466958_0103884
355 Ga0495629_0077323
356 Ga0495638_0001207
357 Ga0495638_0132465
358 Ga0495580_0007029
359 Ga0495582_0041799
360 Ga0495639_0001219
361 Ga0495665_0119804
362 Ga0495586_0001724
363 Ga0495645_0251342
364 Ga0495633_0003118
365 Ga0495588_0004503
366 Ga0495581_0001814
367 Ga0495593_0015855
368 Ga0496100_0002207
369 Ga0496101_0003974
370 Ga0496104_0002447
371 Ga0496104_0030468
372 Ga0496104_0055610
373 Ga0496105_0085787
374 Ga0496105_0090207
375 Ga0496106_0004451
376 Ga0496107_0028173
377 Ga0496111_0091287
378 Ga0496112_0001097
379 Ga0496112_0002750
380 Ga0496113_0002851
381 Ga0496113_0007001
382 Ga0496114_0004993
383 Ga0496114_0029307
384 Ga0496115_0003997
385 Ga0496117_0099439
386 Ga0496119_0018843
387 Ga0496122_0000226
388 Ga0496122_0000534
389 Ga0496123_0000142
390 Ga0496124_0000131
391 Ga0496124_0111924
392 Ga0496126_0005448
393 Ga0501031_0001334
394 Ga0501032_0004723
395 Ga0501033_0004138
396 Ga0501034_0010013
397 Ga0501036_0004168
398 Ga0501037_0003462
399 Ga0501038_0001529
400 Ga0501038_0005350
401 Ga0501039_0005049
402 Ga0501039_0018393
403 Ga0501042_0058586
404 Ga0501043_0001879
405 Ga0501046_0004022
406 Ga0501047_0009142
407 Ga0501047_0247450
408 Ga0501048_0003812
409 Ga0501067_0000821
410 Ga0501068_0000414
411 Ga0501069_0001962
412 Ga0501070_0000050
413 Ga0501070_0005158
414 Ga0501070_0085839
415 Ga0501071_0001023
416 Ga0501072_0062768
417 Ga0501073_0005149
418 Ga0501074_0004808
419 Ga0501074_0068459
420 Ga0501075_0235700
421 Ga0501077_0112073
422 Ga0501079_0003168
423 Ga0501080_0015212
424 Ga0501083_0022323
425 Ga0501035_0005738
426 Ga0501035_0053353
427 Ga0501035_0119060
428 Ga0501044_0011429
429 Ga0501044_0163225
430 Ga0501045_0003055
431 nmdc:mga03n38_1363_c1
432 nmdc:mga00v17_19344_c1
433 nmdc:mga00v17_3661_c1
434 nmdc:mga0yw44_51960_c1
435 nmdc:mga0yw44_64394_c1
436 nmdc:mga0k408_17404_c1
437 nmdc:mga06z11_65249_c1
438 nmdc:mga07m45_2051_c1
439 nmdc:mga0qj67_50935_c1
440 nmdc:mga06r32_172106_c1
441 Ga0500643_000209
442 Ga0500652_000589
443 Ga0500658_0077002
444 Ga0500568_0002074
445 Ga0500604_0001539
446 Ga0500604_0008340
447 Ga0500620_000929
448 Ga0500627_0005507
449 Ga0500645_000108
450 Ga0501084_0032592
451 Ga0501082_0006626
452 Ga0466962_0016751
453 2509118138
454 2512929572
455 2588515144
456 2599742745
457 2600204863
458 2644277589
459 2676741852
460 2688600363
461 2738707954
462 2739333294
463 2756673073
464 2808891899
465 2852646282
466 2874174220
467 2876366868
468 2876811187
469 2879114858
470 2902801912
471 2903453667
472 2903524735
473 2903531022
474 2904117191
475 2909075919
476 2924736060
477 2928110427
478 2928138440
479 2937850621
480 2945918331
481 2946005325
482 2953999653
483 2958065521
484 2963649661
485 2968087031
486 2977927690
487 2977989873
488 637079320
489 8006994444
490 8055040543

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

4

137

0.92

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

155

277

0.89

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

3

137

0.85

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

3

143

0.84

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

4

141

0.84

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

160

341

0.8

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

165

310

0.78

PF07993

NAD_binding_4

Male sterility protein

5

260

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zrn-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (tm0509) with udp-glucose from hyperthermophilic eubacterium thermotoga maritima 0.9128 4 350
6kv9-assembly1.cif.gz_A-2 moee5 in complex with udp-glucuronic acid and nad 0.9093 4 350
6kvc-assembly1.cif.gz_A-2 moee5 in complex with udp-glucose and nad 0.9059 4 352
4zrn-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (tm0509) with udp-glucose from hyperthermophilic eubacterium thermotoga maritima 0.9043 4 350
6pnl-assembly1.cif.gz_A structure of epimerase mth375 from the thermophilic pseudomurein-containing methanogen methanothermobacter thermautotrophicus 0.9023 2 351
ID Description Score Start End Superfamily
af_L7N670_2_342_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9037 5 344 3.40.50.720
af_Q2G289_4_319_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9016 3 351 3.40.50.720
6bwlA02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.8985 215 350 3.90.25.10
af_L7N670_2_342_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8961 5 344 3.40.50.720
af_A0A0R0KMW5_231_418_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8944 169 352 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4R8XGV5-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9568 1 351
AF-A0A4R8XGV5-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9515 1 351
AF-A0A2M7BAX3-F1-model_v4 Nucleoside-diphosphate sugar epimerase 0.9508 4 346
AF-A0A2T7WYJ1-F1-model_v4 Epimerase 0.9491 1 349
AF-A0A1Q9N0B0-F1-model_v4 NAD-dependent epimerase/dehydratase 0.9411 187 351

Map