F356925

General Info

Members Datasets Scaffolds Average Seq Length
244 183 222 377

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2579778521|2579857059
Length 453
Sequence TPEQSGPSVPTVPSGLPGERVTPLVPQPSGPQPRRPSLTASRPASAVSRAAGPTERRLRVLVVVGTRPEVVKLSRVVAALDRAVDLRLVHTGQNYDHDLNQVFFDELGIRRPDHVLDAAGPTPAETISRLISRLDPILAAEAPDAVLLYGDTNTCYAAIAAKRRRIPVFHLEAGNRCFDQRVPEEINRRVADQLSDVHLALTERARGHLLAEGLPVQRIFVVGSPVKEVLTHYAPLIDTSAVLTTLGVQAGRYLLASVHREENVDRPEALSALLETLNRLAARYRLPVIVSTHPRTRDRLGSLRRSGRAPLLDERVRFCRPFGFCDYIALQRAALCVLSDSATLTEEASLVGFPAVLVREAHERPEGMDRGVLVASVLRPERILDAVELIVREAESDRRPRVVPDYDADDVSRRVVHIIVSYVDHVRRTVWYGDTGSSAGPNPAAPAATADSR

Samples

Sample ID Description Type Environment
1 2508501039 Frankia saprophytica CN3 Isolate Nodule
2 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
3 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
4 2619618881 Frankia sp. ACN1ag Isolate Unclassified
5 2619619003 Frankia sp. CpI1-P Isolate Nodule
6 2626541554 Frankia sp. AvcI.1 Isolate Nodule
7 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
8 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
9 2643221640 Caulobacter sp. Root342 Isolate Unclassified
10 2643221642 Caulobacter sp. Root343 Isolate Unclassified
11 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
12 2687453392 Mesorhizobium ciceri biserrulae WSM1284 Isolate Unclassified
13 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
14 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
15 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
16 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
17 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
18 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
19 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
20 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
21 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
22 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
23 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
24 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
25 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
26 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
27 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
28 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
29 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
30 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
31 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
32 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
33 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
34 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
35 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
36 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
41 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
42 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
43 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
72 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
73 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
74 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
75 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
77 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
79 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
81 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
84 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
113 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
114 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
115 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
116 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
117 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
118 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
119 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
122 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
123 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
124 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
125 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
129 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
130 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
131 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
132 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
133 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
134 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
135 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
138 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
139 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
140 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
141 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
142 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
143 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
144 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
145 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
146 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
147 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
148 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
149 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
152 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
153 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
154 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
155 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
156 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
157 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
158 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
159 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
162 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
163 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
164 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
165 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
168 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
169 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
170 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
171 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
172 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
178 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
179 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
180 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
181 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
182 8054920844 Frankia tisae Agncl-8 Isolate Nodule
183 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.98
Metatranscriptomes 0
Isolates 9.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.03
Nodule 6.15
Rhizoplane 2.05
Rhizosphere 63.11
Stem 0
Stem Tuber 0
Unclassified 10.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000466 3300002773 Bacteria 23607
2 JGI25152J39213_1000495 3300002773 Bacteria 22220
3 JGI25152J39213_1002402 3300002773 Bacteria 7152
4 JGI25150J39212_1001209 3300002774 Bacteria 7626
5 JGI25159J45721_1008335 3300002987 Bacteria 2857
6 JGI25151J46595_10001512 3300003187 Bacteria 15553
7 JGI25153J46596_10000398 3300003215 Bacteria 29213
8 JGI25160J50197_1001904 3300003354 Bacteria 9993
9 Ga0055526_1000267 3300003771 Bacteria 43975
10 Ga0055524_1000432 3300003775 Bacteria 35061
11 Ga0055536_1000387 3300003781 Bacteria 32286
12 Ga0055528_1000428 3300003790 Bacteria 33817
13 Ga0055530_10000089 3300003791 Bacteria 78801
14 Ga0055530_10000142 3300003791 Bacteria 64055
15 Ga0055531_10000013 3300003794 Bacteria 187583
16 Ga0055531_10003678 3300003794 Bacteria 9665
17 Ga0065165_1007209 3300005262 Bacteria 5549
18 Ga0065165_1026279 3300005262 Bacteria 1918
19 Ga0070658_10001901 3300005327 Bacteria 17639
20 Ga0070658_10034703 3300005327 Bacteria 4059
21 Ga0070658_10057368 3300005327 Bacteria 3167
22 Ga0070683_100005330 3300005329 Bacteria 10720
23 Ga0070680_100008108 3300005336 Bacteria 8020
24 Ga0070660_100004284 3300005339 Bacteria 9857
25 Ga0070660_100015924 3300005339 Bacteria 5444
26 Ga0070660_100038927 3300005339 Bacteria 3612
27 Ga0070691_10008005 3300005341 Bacteria 4835
28 Ga0070661_100000286 3300005344 Bacteria 40815
29 Ga0070659_100020995 3300005366 Bacteria 4967
30 Ga0070659_100087058 3300005366 Bacteria 2501
31 Ga0070701_10104960 3300005438 Bacteria 1571
32 Ga0070663_100314181 3300005455 Bacteria 1258
33 Ga0070662_100007193 3300005457 Bacteria 7209
34 Ga0070662_100022034 3300005457 Bacteria 4357
35 Ga0070681_10014707 3300005458 Bacteria 7783
36 Ga0070707_100383122 3300005468 Bacteria 1366
37 Ga0070684_100012887 3300005535 Bacteria 6720
38 Ga0068853_100063199 3300005539 Bacteria 3206
39 Ga0070695_100046049 3300005545 Bacteria 2783
40 Ga0068855_100057033 3300005563 Bacteria 4579
41 Ga0068855_100147427 3300005563 Bacteria 2678
42 Ga0070664_100011232 3300005564 Bacteria 7265
43 Ga0068854_100015507 3300005578 Bacteria 5050
44 Ga0068856_100085173 3300005614 Bacteria 3140
45 Ga0068856_100516497 3300005614 Bacteria 1216
46 Ga0068851_10004099 3300005834 Bacteria 6548
47 Ga0075430_100082577 3300006846 Bacteria 2693
48 Ga0075430_100184278 3300006846 Bacteria 1736
49 Ga0075434_100108975 3300006871 Bacteria 2779
50 Ga0075429_100116895 3300006880 Bacteria 2331
51 Ga0075436_100087223 3300006914 Bacteria 2168
52 Ga0097620_100000470 3300006931 Bacteria 39826
53 Ga0075435_100224810 3300007076 Bacteria 1594
54 Ga0105251_10054273 3300009011 Bacteria 1903
55 Ga0105240_10046765 3300009093 Bacteria 5480
56 Ga0105247_10000188 3300009101 Bacteria 60322
57 Ga0105241_10028530 3300009174 Bacteria 4160
58 Ga0105241_10044240 3300009174 Bacteria 3373
59 Ga0105248_10001635 3300009177 Bacteria 24908
60 Ga0105237_10022283 3300009545 Bacteria 6499
61 Ga0105238_10093113 3300009551 Bacteria 3001
62 Ga0105249_10011924 3300009553 Bacteria 7644
63 Ga0123341_1003934 3300009765 Bacteria 12911
64 Ga0105239_10000183 3300010375 Bacteria 91439
65 Ga0105239_10132314 3300010375 Bacteria 2775
66 Ga0105239_10304379 3300010375 Bacteria 1795
67 Ga0157371_10002002 3300013102 Bacteria 20140
68 Ga0157370_10000991 3300013104 Bacteria 35836
69 Ga0157370_10063768 3300013104 Bacteria 3490
70 Ga0157369_10000812 3300013105 Bacteria 39918
71 Ga0157369_10030293 3300013105 Bacteria 5969
72 Ga0157369_10031307 3300013105 Bacteria 5858
73 Ga0157369_10135004 3300013105 Bacteria 2613
74 Ga0157375_10431521 3300013308 Bacteria 1484
75 Ga0163163_10039654 3300014325 Bacteria 4598
76 Ga0207427_103566 3300025231 Bacteria 3176
77 Ga0209437_101556 3300025233 Bacteria 5347
78 Ga0207425_1000653 3300025245 Bacteria 19157
79 Ga0209129_1000078 3300025258 Bacteria 192880
80 Ga0209129_1000259 3300025258 Bacteria 53817
81 Ga0209129_1002070 3300025258 Bacteria 10341
82 Ga0209233_1000635 3300025261 Bacteria 17525
83 Ga0209673_1001056 3300025273 Bacteria 31589
84 Ga0209130_1003634 3300025284 Bacteria 6394
85 Ga0209130_1005773 3300025284 Bacteria 4190
86 Ga0209676_1000824 3300025292 Bacteria 40329
87 Ga0209025_1001610 3300025294 Bacteria 28276
88 Ga0209025_1011904 3300025294 Bacteria 5662
89 Ga0209564_1000488 3300025295 Bacteria 65982
90 Ga0209758_1000151 3300025297 Bacteria 162732
91 Ga0209758_1004233 3300025297 Bacteria 12147
92 Ga0209758_1019710 3300025297 Unclassified 3236
93 Ga0209050_1000014 3300025298 Bacteria 774327
94 Ga0209050_1000042 3300025298 Bacteria 402842
95 Ga0209256_1000901 3300025299 Bacteria 36379
96 Ga0207426_1000828 3300025302 Bacteria 33002
97 Ga0209051_1003942 3300025303 Bacteria 9457
98 Ga0209257_1000019 3300025304 Bacteria 774261
99 Ga0209257_1000826 3300025304 Bacteria 44769
100 Ga0207710_10000038 3300025900 Bacteria 241794
101 Ga0207647_10002799 3300025904 Bacteria 13157
102 Ga0207705_10002825 3300025909 Bacteria 13282
103 Ga0207705_10068611 3300025909 Bacteria 2567
104 Ga0207705_10215922 3300025909 Bacteria 1455
105 Ga0207654_10063735 3300025911 Bacteria 2164
106 Ga0207707_10095622 3300025912 Bacteria 2596
107 Ga0207695_10027902 3300025913 Bacteria 6275
108 Ga0207695_10034785 3300025913 Bacteria 5473
109 Ga0207671_10025702 3300025914 Bacteria 4420
110 Ga0207660_10018032 3300025917 Bacteria 4701
111 Ga0207657_10000025 3300025919 Bacteria 143407
112 Ga0207657_10010589 3300025919 Bacteria 9192
113 Ga0207657_10015906 3300025919 Bacteria 7268
114 Ga0207657_10090808 3300025919 Bacteria 2548
115 Ga0207649_10003033 3300025920 Bacteria 9254
116 Ga0207649_10007758 3300025920 Bacteria 5837
117 Ga0207694_10004781 3300025924 Bacteria 10519
118 Ga0207650_10030185 3300025925 Bacteria 3903
119 Ga0207644_10068275 3300025931 Bacteria 2593
120 Ga0207690_10001479 3300025932 Bacteria 14679
121 Ga0207690_10007063 3300025932 Bacteria 6667
122 Ga0207690_10095452 3300025932 Bacteria 2112
123 Ga0207706_10000035 3300025933 Bacteria 138894
124 Ga0207711_10003853 3300025941 Bacteria 12909
125 Ga0207661_10031716 3300025944 Bacteria 4086
126 Ga0207661_10225319 3300025944 Bacteria 1658
127 Ga0207679_10050548 3300025945 Bacteria 3039
128 Ga0207712_10007702 3300025961 Bacteria 6809
129 Ga0207640_10012513 3300025981 Bacteria 4836
130 Ga0207639_10006351 3300026041 Bacteria 8029
131 Ga0207702_10015270 3300026078 Bacteria 6367
132 Ga0207702_10020829 3300026078 Bacteria 5424
133 Ga0207702_10056900 3300026078 Bacteria 3321
134 Ga0207674_10007229 3300026116 Bacteria 12955
135 Ga0207674_10053791 3300026116 Bacteria 4102
136 Ga0207674_10109054 3300026116 Bacteria 2745
137 Ga0207698_10005752 3300026142 Bacteria 7693
138 Ga0209974_10028850 3300027876 Bacteria 1838
139 Ga0268265_10001956 3300028380 Bacteria 16358
140 Ga0265318_10002306 3300028577 Bacteria 10248
141 Ga0265330_10023473 3300031235 Bacteria 2801
142 Ga0265332_10002626 3300031238 Bacteria 9056
143 Ga0265328_10000923 3300031239 Bacteria 13540
144 Ga0265320_10029850 3300031240 Bacteria 2818
145 Ga0265339_10076288 3300031249 Bacteria 1778
146 Ga0265331_10006608 3300031250 Bacteria 6826
147 Ga0307509_10000002 3300031507 Bacteria 607551
148 Ga0307414_10000209 3300032004 Bacteria 39278
149 Ga0373934_0049125 3300035086 Bacteria 1670
150 Ga0316582_0052939 3300036647 Bacteria 2581
151 Ga0395899_0013820 3300037312 Bacteria 6170
152 Ga0395899_0036318 3300037312 Bacteria 3696
153 Ga0395900_0004609 3300037418 Bacteria 14544
154 Ga0395900_0008722 3300037418 Bacteria 10411
155 Ga0395900_0010096 3300037418 Bacteria 9657
156 Ga0395900_0028548 3300037418 Bacteria 5717
157 Ga0395900_0146267 3300037418 Bacteria 2416
158 Ga0395898_0085306 3300037466 Bacteria 3043
159 Ga0395905_0022584 3300037471 Bacteria 5949
160 Ga0395905_0059012 3300037471 Bacteria 3587
161 Ga0395901_0000470 3300038443 Bacteria 46904
162 Ga0395901_0059607 3300038443 Bacteria 3971
163 Ga0395901_0163809 3300038443 Bacteria 2335
164 Ga0395901_0256102 3300038443 Bacteria 1822
165 Ga0395901_0265186 3300038443 Bacteria 1787
166 Ga0400483_018806 3300039062 Bacteria 32826
167 Ga0400483_179368 3300039062 Bacteria 13619
168 Ga0451833_0386971 3300041491 Bacteria 23088
169 Ga0451835_0378827 3300041492 Bacteria 31868
170 Ga0451837_0885647 3300041494 Bacteria 6449
171 Ga0451849_0092877 3300041505 Bacteria 25741
172 Ga0451843_0366504 3300041509 Bacteria 4089
173 Ga0451855_1300279 3300041511 Bacteria 6022
174 Ga0451853_1342497 3300041512 Bacteria 31826
175 Ga0451577_0000084 3300042876 Bacteria 213553
176 Ga0466969_0031953 3300044656 Bacteria 2678
177 Ga0466966_0008993 3300044684 Bacteria 6619
178 Ga0466961_0141860 3300044693 Bacteria 1504
179 Ga0466963_0197146 3300044694 Bacteria 1408
180 Ga0466964_0024677 3300044706 Bacteria 2344
181 Ga0453684_0003652 3300044712 Bacteria 34170
182 Ga0453684_0021039 3300044712 Bacteria 9781
183 Ga0453684_0050178 3300044712 Bacteria 5492
184 Ga0466959_0043620 3300045049 Bacteria 3306
185 Ga0495596_0003023 3300046500 Bacteria 8708
186 Ga0495583_0000366 3300046506 Bacteria 70369
187 Ga0495632_0000120 3300046519 Bacteria 80853
188 Ga0495642_0020938 3300046528 Bacteria 2571
189 Ga0495597_0008264 3300046542 Bacteria 5223
190 Ga0495668_0000001 3300046616 Bacteria 1013420
191 Ga0495668_0157663 3300046616 Bacteria 1243
192 Ga0495625_0001075 3300046660 Bacteria 35467
193 Ga0495661_0000693 3300046665 Bacteria 33492
194 Ga0495661_0024566 3300046665 Bacteria 3901
195 Ga0495588_0151406 3300046674 Bacteria 1226
196 Ga0495669_0002671 3300046684 Bacteria 7300
197 Ga0495671_0000349 3300046692 Bacteria 38480
198 Ga0495660_0099791 3300046810 Bacteria 1496
199 Ga0495681_0011575 3300047470 Bacteria 5243
200 Ga0495681_0045872 3300047470 Bacteria 2088
201 Ga0496101_0072150 3300048904 Bacteria 2534
202 Ga0496102_0004654 3300048905 Bacteria 11612
203 Ga0496106_0000712 3300048909 Bacteria 23955
204 Ga0496112_0006801 3300048915 Bacteria 10077
205 Ga0496115_0001494 3300048918 Bacteria 16789
206 Ga0496117_0000038 3300048920 Bacteria 322781
207 Ga0496118_0000019 3300048921 Bacteria 489649
208 Ga0496119_0002646 3300048922 Bacteria 19402
209 Ga0496120_0000643 3300048923 Bacteria 51596
210 Ga0496120_0023105 3300048923 Bacteria 3897
211 Ga0496121_0000069 3300048924 Bacteria 253087
212 Ga0496124_0041073 3300048927 Bacteria 3995
213 Ga0496126_0001190 3300048929 Bacteria 42445
214 Ga0496126_0003205 3300048929 Bacteria 20984
215 Ga0501290_001824 3300049513 Bacteria 2824
216 Ga0501294_000004 3300049517 Bacteria 27929
217 Ga0501257_002979 3300049686 Bacteria 3601
218 Ga0501282_000005 3300049778 Bacteria 42046
219 nmdc:mga0qj67_144708_c1 3300050509 Bacteria 1927
220 nmdc:mga0n895_40323_c1 3300050512 Bacteria 4535
221 Ga0500568_0032814 3300053139 Bacteria 2133
222 Ga0500616_0004688 3300053153 Bacteria 9631

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0050178 Ga0453684_0050178_1073_2137 354
2 3300005327 Ga0070658_10057368 Ga0070658_100573683 366
3 3300005329 Ga0070683_100005330 Ga0070683_1000053302 366
4 3300005341 Ga0070691_10008005 Ga0070691_100080054 366
5 3300005457 Ga0070662_100022034 Ga0070662_1000220344 366
6 3300005834 Ga0068851_10004099 Ga0068851_100040992 366
7 3300013105 Ga0157369_10030293 Ga0157369_100302934 366
8 3300025904 Ga0207647_10002799 Ga0207647_100027999 366
9 3300025909 Ga0207705_10002825 Ga0207705_1000282510 366
10 3300025911 Ga0207654_10063735 Ga0207654_100637352 366
11 3300025913 Ga0207695_10027902 Ga0207695_100279022 366
12 3300025914 Ga0207671_10025702 Ga0207671_100257022 366
13 3300025917 Ga0207660_10018032 Ga0207660_100180322 366
14 3300025919 Ga0207657_10015906 Ga0207657_100159062 366
15 3300025920 Ga0207649_10007758 Ga0207649_100077584 366
16 3300025924 Ga0207694_10004781 Ga0207694_100047814 366
17 3300025931 Ga0207644_10068275 Ga0207644_100682752 366
18 3300025932 Ga0207690_10007063 Ga0207690_100070635 366
19 3300025945 Ga0207679_10050548 Ga0207679_100505483 366
20 3300025981 Ga0207640_10012513 Ga0207640_100125134 366
21 3300026078 Ga0207702_10020829 Ga0207702_100208294 366
22 3300026078 Ga0207702_10056900 Ga0207702_100569003 366
23 3300026116 Ga0207674_10007229 Ga0207674_100072299 366
24 3300026142 Ga0207698_10005752 Ga0207698_100057522 366
25 3300037418 Ga0395900_0146267 Ga0395900_0146267_249_1349 366
26 3300038443 Ga0395901_0163809 Ga0395901_0163809_413_1513 366
27 3300038443 Ga0395901_0256102 Ga0395901_0256102_374_1474 366
28 3300048915 Ga0496112_0006801 Ga0496112_0006801_4712_5812 366
29 3300003791 Ga0055530_10000142 Ga0055530_1000014248 367
30 3300003794 Ga0055531_10000013 Ga0055531_1000001314 367
31 3300010375 Ga0105239_10132314 Ga0105239_101323142 367
32 3300025298 Ga0209050_1000014 Ga0209050_1000014150 367
33 3300025304 Ga0209257_1000019 Ga0209257_1000019542 367
34 3300025932 Ga0207690_10095452 Ga0207690_100954522 367
35 3300002773 JGI25152J39213_1000495 JGI25152J39213_10004952 368
36 3300003187 JGI25151J46595_10001512 JGI25151J46595_1000151214 368
37 3300005262 Ga0065165_1026279 Ga0065165_10262792 368
38 3300005438 Ga0070701_10104960 Ga0070701_101049602 368
39 3300005545 Ga0070695_100046049 Ga0070695_1000460492 368
40 3300025258 Ga0209129_1000078 Ga0209129_100007887 368
41 3300025284 Ga0209130_1005773 Ga0209130_10057732 368
42 3300025294 Ga0209025_1001610 Ga0209025_100161018 368
43 3300037418 Ga0395900_0028548 Ga0395900_0028548_4270_5376 368
44 3300038443 Ga0395901_0265186 Ga0395901_0265186_628_1734 368
45 3300009093 Ga0105240_10046765 Ga0105240_100467653 370
46 3300009101 Ga0105247_10000188 Ga0105247_1000018837 370
47 3300009177 Ga0105248_10001635 Ga0105248_1000163511 370
48 3300010375 Ga0105239_10000183 Ga0105239_1000018318 370
49 3300014325 Ga0163163_10039654 Ga0163163_100396542 370
50 3300037418 Ga0395900_0004609 Ga0395900_0004609_4854_5966 370
51 3300038443 Ga0395901_0059607 Ga0395901_0059607_107_1219 370
52 3300046500 Ga0495596_0003023 Ga0495596_0003023_4933_6045 370
53 3300046519 Ga0495632_0000120 Ga0495632_0000120_61383_62495 370
54 3300047470 Ga0495681_0045872 Ga0495681_0045872_417_1529 370
55 3300048904 Ga0496101_0072150 Ga0496101_0072150_163_1275 370
56 3300048905 Ga0496102_0004654 Ga0496102_0004654_7629_8741 370
57 3300048920 Ga0496117_0000038 Ga0496117_0000038_289946_291058 370
58 3300048921 Ga0496118_0000019 Ga0496118_0000019_388564_389676 370
59 3300048922 Ga0496119_0002646 Ga0496119_0002646_449_1621 370
60 3300048923 Ga0496120_0000643 Ga0496120_0000643_43534_44706 370
61 3300048923 Ga0496120_0023105 Ga0496120_0023105_1774_2886 370
62 3300048927 Ga0496124_0041073 Ga0496124_0041073_1108_2220 370
63 3300048929 Ga0496126_0001190 Ga0496126_0001190_37179_38291 370
64 3300049513 Ga0501290_001824 Ga0501290_001824_512_1624 370
65 3300049517 Ga0501294_000004 Ga0501294_000004_2962_4074 370
66 3300049686 Ga0501257_002979 Ga0501257_002979_1047_2159 370
67 3300049778 Ga0501282_000005 Ga0501282_000005_37949_39061 370
68 3300025900 Ga0207710_10000038 Ga0207710_10000038188 371
69 3300025941 Ga0207711_10003853 Ga0207711_100038533 371
70 3300044712 Ga0453684_0021039 Ga0453684_0021039_7395_8510 371
71 3300006846 Ga0075430_100082577 Ga0075430_1000825773 372
72 3300006914 Ga0075436_100087223 Ga0075436_1000872232 372
73 3300044706 Ga0466964_0024677 Ga0466964_0024677_968_2086 372
74 3300050512 nmdc:mga0n895_40323_c1 nmdc:mga0n895_40323_c1_380_1498 372
75 iso_pu_bacteria 2508501039 2508671602 372
76 iso_pu_bacteria 2643221563 2643832117 372
77 iso_pu_bacteria 2643221608 2644054088 372
78 iso_pu_bacteria 2675902999 2676200725 372
79 iso_pu_bacteria 2687453392 2688599002 372
80 iso_pu_bacteria 2773857921 2774845303 372
81 iso_pu_bacteria 2945909444 2945910234 372
82 3300005327 Ga0070658_10034703 Ga0070658_100347032 373
83 3300005339 Ga0070660_100038927 Ga0070660_1000389272 373
84 3300005535 Ga0070684_100012887 Ga0070684_1000128873 373
85 3300013102 Ga0157371_10002002 Ga0157371_100020026 373
86 3300013104 Ga0157370_10063768 Ga0157370_100637682 373
87 3300013105 Ga0157369_10031307 Ga0157369_100313074 373
88 3300025909 Ga0207705_10068611 Ga0207705_100686112 373
89 3300025919 Ga0207657_10090808 Ga0207657_100908082 373
90 3300025944 Ga0207661_10031716 Ga0207661_100317162 373
91 3300037312 Ga0395899_0036318 Ga0395899_0036318_753_1874 373
92 3300037418 Ga0395900_0010096 Ga0395900_0010096_753_1874 373
93 3300037466 Ga0395898_0085306 Ga0395898_0085306_753_1874 373
94 3300037471 Ga0395905_0059012 Ga0395905_0059012_1823_2944 373
95 3300038443 Ga0395901_0000470 Ga0395901_0000470_5788_6909 373
96 3300005614 Ga0068856_100516497 Ga0068856_1005164971 374
97 3300009174 Ga0105241_10044240 Ga0105241_100442402 374
98 3300009545 Ga0105237_10022283 Ga0105237_100222835 374
99 3300009551 Ga0105238_10093113 Ga0105238_100931131 374
100 3300013105 Ga0157369_10135004 Ga0157369_101350042 374
101 3300025925 Ga0207650_10030185 Ga0207650_100301854 374
102 3300035086 Ga0373934_0049125 Ga0373934_0049125_187_1311 374
103 3300037312 Ga0395899_0013820 Ga0395899_0013820_66_1190 374
104 3300037471 Ga0395905_0022584 Ga0395905_0022584_4581_5705 374
105 3300044656 Ga0466969_0031953 Ga0466969_0031953_1175_2299 374
106 3300044693 Ga0466961_0141860 Ga0466961_0141860_168_1292 374
107 3300044694 Ga0466963_0197146 Ga0466963_0197146_93_1217 374
108 iso_pu_bacteria 2643221640 2644227134 374
109 iso_pu_bacteria 2643221642 2644233399 374
110 3300005327 Ga0070658_10001901 Ga0070658_1000190112 375
111 3300005336 Ga0070680_100008108 Ga0070680_1000081086 375
112 3300005339 Ga0070660_100004284 Ga0070660_1000042842 375
113 3300005339 Ga0070660_100015924 Ga0070660_1000159242 375
114 3300005344 Ga0070661_100000286 Ga0070661_10000028632 375
115 3300005366 Ga0070659_100020995 Ga0070659_1000209953 375
116 3300005366 Ga0070659_100087058 Ga0070659_1000870581 375
117 3300005455 Ga0070663_100314181 Ga0070663_1003141811 375
118 3300005457 Ga0070662_100007193 Ga0070662_1000071932 375
119 3300005458 Ga0070681_10014707 Ga0070681_100147077 375
120 3300005468 Ga0070707_100383122 Ga0070707_1003831221 375
121 3300005539 Ga0068853_100063199 Ga0068853_1000631992 375
122 3300005563 Ga0068855_100057033 Ga0068855_1000570332 375
123 3300005564 Ga0070664_100011232 Ga0070664_1000112325 375
124 3300005578 Ga0068854_100015507 Ga0068854_1000155074 375
125 3300005614 Ga0068856_100085173 Ga0068856_1000851732 375
126 3300009174 Ga0105241_10028530 Ga0105241_100285304 375
127 3300013104 Ga0157370_10000991 Ga0157370_1000099131 375
128 3300013105 Ga0157369_10000812 Ga0157369_1000081217 375
129 3300025909 Ga0207705_10215922 Ga0207705_102159222 375
130 3300025912 Ga0207707_10095622 Ga0207707_100956222 375
131 3300025919 Ga0207657_10000025 Ga0207657_1000002560 375
132 3300025919 Ga0207657_10010589 Ga0207657_100105896 375
133 3300025920 Ga0207649_10003033 Ga0207649_100030336 375
134 3300025932 Ga0207690_10001479 Ga0207690_100014799 375
135 3300025933 Ga0207706_10000035 Ga0207706_1000003598 375
136 3300025944 Ga0207661_10225319 Ga0207661_102253192 375
137 3300026041 Ga0207639_10006351 Ga0207639_100063514 375
138 3300026078 Ga0207702_10015270 Ga0207702_100152704 375
139 3300026116 Ga0207674_10053791 Ga0207674_100537914 375
140 3300026116 Ga0207674_10109054 Ga0207674_101090543 375
141 3300028577 Ga0265318_10002306 Ga0265318_100023065 375
142 3300031235 Ga0265330_10023473 Ga0265330_100234733 375
143 3300031238 Ga0265332_10002626 Ga0265332_100026268 375
144 3300031239 Ga0265328_10000923 Ga0265328_1000092311 375
145 3300031240 Ga0265320_10029850 Ga0265320_100298502 375
146 3300031249 Ga0265339_10076288 Ga0265339_100762882 375
147 3300031250 Ga0265331_10006608 Ga0265331_100066088 375
148 3300031507 Ga0307509_10000002 Ga0307509_1000000241 375
149 3300036647 Ga0316582_0052939 Ga0316582_0052939_110_1240 375
150 iso_pu_bacteria 2513237094 2513640309 375
151 iso_pu_bacteria 2935801545 2935804918 375
152 iso_pu_bacteria 8019576017 8019580438 375
153 iso_pu_bacteria 8019586578 8019588161 375
154 iso_pu_bacteria 8019597564 8019603181 375
155 iso_pu_bacteria 8019608314 8019615354 375
156 3300003781 Ga0055536_1000387 Ga0055536_10003878 376
157 3300003791 Ga0055530_10000089 Ga0055530_1000008961 376
158 3300003794 Ga0055531_10003678 Ga0055531_100036788 376
159 3300005563 Ga0068855_100147427 Ga0068855_1001474272 376
160 3300006931 Ga0097620_100000470 Ga0097620_10000047017 376
161 3300009011 Ga0105251_10054273 Ga0105251_100542732 376
162 3300009553 Ga0105249_10011924 Ga0105249_100119242 376
163 3300025231 Ga0207427_103566 Ga0207427_1035663 376
164 3300025233 Ga0209437_101556 Ga0209437_1015562 376
165 3300025261 Ga0209233_1000635 Ga0209233_100063512 376
166 3300025292 Ga0209676_1000824 Ga0209676_100082434 376
167 3300025298 Ga0209050_1000042 Ga0209050_100004272 376
168 3300025304 Ga0209257_1000826 Ga0209257_100082635 376
169 3300025961 Ga0207712_10007702 Ga0207712_100077023 376
170 3300028380 Ga0268265_10001956 Ga0268265_100019563 376
171 3300032004 Ga0307414_10000209 Ga0307414_1000020915 376
172 3300039062 Ga0400483_018806 Ga0400483_018806_26814_27944 376
173 3300039062 Ga0400483_179368 Ga0400483_179368_6110_7240 376
174 3300042876 Ga0451577_0000084 Ga0451577_0000084_58_1188 376
175 3300044712 Ga0453684_0003652 Ga0453684_0003652_3380_4510 376
176 3300046506 Ga0495583_0000366 Ga0495583_0000366_22661_23791 376
177 3300046528 Ga0495642_0020938 Ga0495642_0020938_1287_2417 376
178 3300046616 Ga0495668_0000001 Ga0495668_0000001_664842_665972 376
179 3300046616 Ga0495668_0157663 Ga0495668_0157663_61_1191 376
180 3300046665 Ga0495661_0000693 Ga0495661_0000693_11047_12177 376
181 3300046674 Ga0495588_0151406 Ga0495588_0151406_40_1170 376
182 3300046684 Ga0495669_0002671 Ga0495669_0002671_5465_6595 376
183 3300046692 Ga0495671_0000349 Ga0495671_0000349_18468_19598 376
184 3300047470 Ga0495681_0011575 Ga0495681_0011575_593_1723 376
185 3300053139 Ga0500568_0032814 Ga0500568_0032814_823_1953 376
186 3300006871 Ga0075434_100108975 Ga0075434_1001089752 377
187 3300007076 Ga0075435_100224810 Ga0075435_1002248102 377
188 3300013308 Ga0157375_10431521 Ga0157375_104315212 377
189 3300037418 Ga0395900_0008722 Ga0395900_0008722_5257_6390 377
190 3300044684 Ga0466966_0008993 Ga0466966_0008993_3009_4142 377
191 3300053153 Ga0500616_0004688 Ga0500616_0004688_5364_6497 377
192 3300006846 Ga0075430_100184278 Ga0075430_1001842781 378
193 3300006880 Ga0075429_100116895 Ga0075429_1001168952 378
194 3300025913 Ga0207695_10034785 Ga0207695_100347853 378
195 3300045049 Ga0466959_0043620 Ga0466959_0043620_174_1310 378
196 3300046542 Ga0495597_0008264 Ga0495597_0008264_244_1380 378
197 3300046660 Ga0495625_0001075 Ga0495625_0001075_22676_23812 378
198 3300046665 Ga0495661_0024566 Ga0495661_0024566_844_2025 378
199 3300046810 Ga0495660_0099791 Ga0495660_0099791_77_1213 378
200 3300048918 Ga0496115_0001494 Ga0496115_0001494_4474_5619 378
201 3300048924 Ga0496121_0000069 Ga0496121_0000069_153375_154514 378
202 3300048929 Ga0496126_0003205 Ga0496126_0003205_4091_5230 378
203 3300050509 nmdc:mga0qj67_144708_c1 nmdc:mga0qj67_144708_c1_224_1372 378
204 iso_pu_bacteria 2579778521 2579857059 378
205 iso_pu_bacteria 2619618881 2619853969 378
206 iso_pu_bacteria 2619619003 2620352970 378
207 iso_pu_bacteria 2626541554 2626638319 378
208 iso_pu_bacteria 8054913762 8054920202 378
209 iso_pu_bacteria 8054920844 8054925803 378
210 iso_pu_bacteria 8055157932 8055160121 378
211 3300002773 JGI25152J39213_1000466 JGI25152J39213_10004663 379
212 3300002773 JGI25152J39213_1002402 JGI25152J39213_10024025 379
213 3300002774 JGI25150J39212_1001209 JGI25150J39212_10012095 379
214 3300002987 JGI25159J45721_1008335 JGI25159J45721_10083352 379
215 3300003215 JGI25153J46596_10000398 JGI25153J46596_100003988 379
216 3300003354 JGI25160J50197_1001904 JGI25160J50197_10019046 379
217 3300003771 Ga0055526_1000267 Ga0055526_100026731 379
218 3300003775 Ga0055524_1000432 Ga0055524_100043227 379
219 3300003790 Ga0055528_1000428 Ga0055528_100042830 379
220 3300005262 Ga0065165_1007209 Ga0065165_10072095 379
221 3300009765 Ga0123341_1003934 Ga0123341_10039346 379
222 3300010375 Ga0105239_10304379 Ga0105239_103043792 379
223 3300025245 Ga0207425_1000653 Ga0207425_100065312 379
224 3300025258 Ga0209129_1000259 Ga0209129_100025916 379
225 3300025258 Ga0209129_1002070 Ga0209129_10020703 379
226 3300025273 Ga0209673_1001056 Ga0209673_10010564 379
227 3300025284 Ga0209130_1003634 Ga0209130_10036342 379
228 3300025294 Ga0209025_1011904 Ga0209025_10119044 379
229 3300025295 Ga0209564_1000488 Ga0209564_100048829 379
230 3300025297 Ga0209758_1000151 Ga0209758_1000151105 379
231 3300025297 Ga0209758_1004233 Ga0209758_100423312 379
232 3300025297 Ga0209758_1019710 Ga0209758_10197103 379
233 3300025299 Ga0209256_1000901 Ga0209256_100090110 379
234 3300025302 Ga0207426_1000828 Ga0207426_100082827 379
235 3300025303 Ga0209051_1003942 Ga0209051_10039425 379
236 3300027876 Ga0209974_10028850 Ga0209974_100288502 379
237 3300041491 Ga0451833_0386971 Ga0451833_0386971_1417_2556 379
238 3300041492 Ga0451835_0378827 Ga0451835_0378827_3320_4459 379
239 3300041494 Ga0451837_0885647 Ga0451837_0885647_2171_3310 379
240 3300041505 Ga0451849_0092877 Ga0451849_0092877_3680_4819 379
241 3300041509 Ga0451843_0366504 Ga0451843_0366504_2105_3244 379
242 3300041511 Ga0451855_1300279 Ga0451855_1300279_2400_3539 379
243 3300041512 Ga0451853_1342497 Ga0451853_1342497_27548_28687 379
244 3300048909 Ga0496106_0000712 Ga0496106_0000712_5085_6224 379

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02350

Epimerase_2

UDP-N-acetylglucosamine 2-epimerase

78

420

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ya2-assembly1.cif.gz_A crystal structure of capsular polysaccharide synthesis enzyme capg from staphylococcus aureus 0.9659 4 376
7ya2-assembly1.cif.gz_E crystal structure of capsular polysaccharide synthesis enzyme capg from staphylococcus aureus 0.9585 4 376
7ya2-assembly1.cif.gz_A crystal structure of capsular polysaccharide synthesis enzyme capg from staphylococcus aureus 0.9583 4 376
7ya2-assembly1.cif.gz_E crystal structure of capsular polysaccharide synthesis enzyme capg from staphylococcus aureus 0.951 4 376
4hwg-assembly1.cif.gz_A structure of udp-n-acetylglucosamine 2-epimerase from rickettsia bellii 0.9373 5 375
ID Description Score Start End Superfamily
af_Q2G1K2_188_329_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9883 191 330 3.40.50.2000
af_Q2G1K2_188_329_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9678 191 330 3.40.50.2000
af_Q58899_2_184_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9653 8 187 3.40.50.2000
4hwgA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9601 5 189 3.40.50.2000
af_Q58899_3_336_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9484 9 331 3.40.50.2000
ID Description Score Start End GO Terms
AF-M6G8M4-F1-model_v4 UDP-N-acetylglucosamine 2-epimerase-like protein 0.993 10 194 GO:0008761
AF-A0A7Y5AI84-F1-model_v4 UDP-N-acetylglucosamine 2-epimerase (Non-hydrolyzing) 0.992 4 157 GO:0008761
AF-A0A354UDD1-F1-model_v4 UDP-N-acetylglucosamine 2-epimerase (Non-hydrolyzing) 0.9907 4 311 GO:0008761
AF-A0A412XU31-F1-model_v4 UDP-N-acetylglucosamine 2-epimerase (Non-hydrolyzing) 0.9897 4 197 GO:0008761
AF-A0A7J5J9Q9-F1-model_v4 UDP-N-acetyl glucosamine 2-epimerase 0.9889 5 335 GO:0008761

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pLDDT pTM Quality
91.12 0.9 High
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Predicted Structure (AlphaFold2)

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