F356818
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 244 | 200 | 488 | 507 |
Family's Representative Sequence
| Representative Sequence | 3300048907|Ga0496104_0157596|Ga0496104_0157596_457_2160 |
| Length | 545 |
| Sequence | MSETRAPEAQADDDGGLQPHPAREVPTDSTQPLSDLGADGGNPLRDPADRRLPRVPEPCALVIFGIGGDLSRKKLIPAVYDLANRGLLPTDFVLVGFSRADWPGGGSFESLARKSAKDGARTGWNEEVWHRLAGNTKFVEGSFDDDAAFDELVEVMDSLRESHGIQGNAAFYLSIPPSAFPTVLKQMGRTGMADNDKSGGWRRVVVEKPFGTDLKSARELNSLVDDVFTAQDVFRIDHYLGKETVQNILALRFANALFEPVWNSKYVDSVQITMAEDVGIGTRAAFYDATGTARDVLQNHLLQLTAMTAMEEPTSFDAAEIRTEKLKVIRAIALPKNINTDTVRGQYLAGWVAGERAVGYHEEEGVPPDSTTETYVAVKLGIQNRRWAGVPFYIRAGKRLPRRVTEIAVLFKKAPHLPFHAADIEMLGANQLVVRVQPDEGVTLKFGSKVPGTTMEVRDITMDFQYGEAFTDSSPEAYERLILDVLIGDRTLFPDAAEVEASWRVIDPLEAAWAGTKPETYRSGEWGPRAADELLARDGRQWRRA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 2 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 7 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 13 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 14 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 15 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 16 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 17 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 18 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 19 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 20 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 21 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 22 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 23 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 24 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 25 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 26 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 37 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 38 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 39 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 40 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 41 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 42 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 43 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 65 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 66 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 67 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 68 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 69 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 70 | 3300033529 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 71 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 72 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 73 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 74 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 75 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 76 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 77 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 78 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 79 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 80 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 81 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 82 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 83 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 84 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 85 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 86 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 87 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 88 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 99 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 100 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 101 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 102 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 103 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 104 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 105 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 106 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 107 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 108 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 109 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 110 | 3300049522 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control | Metagenome | Rhizosphere |
| 111 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049652 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought | Metagenome | Rhizosphere |
| 119 | 3300049661 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control | Metagenome | Rhizosphere |
| 120 | 3300049662 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control | Metagenome | Rhizosphere |
| 121 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 122 | 3300049664 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought | Metagenome | Rhizosphere |
| 123 | 3300049669 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought | Metagenome | Rhizosphere |
| 124 | 3300049675 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control | Metagenome | Rhizosphere |
| 125 | 3300049704 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control | Metagenome | Rhizosphere |
| 126 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 127 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300049851 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought | Metagenome | Rhizosphere |
| 129 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 130 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 131 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 132 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 133 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 134 | 3300053149 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere | Metagenome | Endosphere |
| 135 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 137 | 2501939600 | Micromonospora sp. L5 | Isolate | Unclassified |
| 138 | 2508501039 | Frankia saprophytica CN3 | Isolate | Nodule |
| 139 | 2517572101 | Frankia sp. DC12 | Isolate | Nodule |
| 140 | 2582581313 | Streptomyces mirabilis OV308 | Isolate | Rhizosphere |
| 141 | 2616644814 | Streptomyces mirabilis OK461 | Isolate | Rhizosphere |
| 142 | 2619618881 | Frankia sp. ACN1ag | Isolate | Unclassified |
| 143 | 2619619003 | Frankia sp. CpI1-P | Isolate | Nodule |
| 144 | 2643221647 | Streptomyces sp. Root369 | Isolate | Unclassified |
| 145 | 2675902999 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 146 | 2675903059 | Asanoa hainanensis CGMCC 4.5593 | Isolate | Rhizosphere |
| 147 | 2684623035 | Frankia sp. NRRL B-16219 | Isolate | Rhizosphere |
| 148 | 2687453737 | Frankia sp. BMG5.36 | Isolate | Nodule |
| 149 | 2687453743 | Frankia colletiae Cc1.17 | Isolate | Nodule |
| 150 | 2751185782 | Actinoplanes subtropicus NRRL B-24665 | Isolate | Rhizosphere |
| 151 | 2772190715 | Micromonospora chokoriensis NRRL B-24750 | Isolate | Unclassified |
| 152 | 2773857921 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 153 | 2784746763 | Streptomyces ossamyceticus SAI-001 | Isolate | Unclassified |
| 154 | 2784746768 | Streptomyces griseorubiginosus SAI-142 | Isolate | Unclassified |
| 155 | 2786546132 | Streptomyces sp. W SAI-097 | Isolate | Unclassified |
| 156 | 2811994879 | Streptomyces sp. 4-17 | Isolate | Unclassified |
| 157 | 2831935698 | Jishengella sp. AZ1-13 | Isolate | Unclassified |
| 158 | 2832004796 | Micromonospora endophytica JCM 18317 | Isolate | Unclassified |
| 159 | 2852635781 | Streptomyces sp. AK010 | Isolate | Rhizosphere |
| 160 | 2855670206 | Micromonospora noduli Lupac 07 | Isolate | Nodule |
| 161 | 2855676851 | Micromonospora saelicesensis GAR05 | Isolate | Unclassified |
| 162 | 2855683550 | Micromonospora sp. RP3T | Isolate | Unclassified |
| 163 | 2856858025 | Micromonospora aurantiaca 110B(2018) | Isolate | Unclassified |
| 164 | 2857288857 | Micromonospora noduli ONO23 | Isolate | Unclassified |
| 165 | 2858848962 | Micromonospora saelicesensis GAR06 | Isolate | Unclassified |
| 166 | 2858882152 | Micromonospora noduli MED15 | Isolate | Nodule |
| 167 | 2858888857 | Micromonospora saelicesensis Lupac 06 | Isolate | Unclassified |
| 168 | 2858895516 | Micromonospora saelicesensis PSN13 | Isolate | Unclassified |
| 169 | 2858902515 | Micromonospora sp. MW-13 | Isolate | Rhizosphere |
| 170 | 2861520306 | Phytomonospora endophytica DSM 45386 | Isolate | Unclassified |
| 171 | 2866065130 | Micromonospora endophytica DSM 45430 | Isolate | Unclassified |
| 172 | 2867428634 | Streptomyces sp. RP5T | Isolate | Unclassified |
| 173 | 2867507094 | Micromonospora zingiberis PLAI 1-1 | Isolate | Unclassified |
| 174 | 2869048445 | Micromonospora saelicesensis PSN01 | Isolate | Unclassified |
| 175 | 2869061728 | Micromonospora noduli ONO86 | Isolate | Unclassified |
| 176 | 2869068681 | Micromonospora noduli GUI43 | Isolate | Unclassified |
| 177 | 2880489317 | Micromonospora ureilytica DSM 101692 | Isolate | Unclassified |
| 178 | 2880495981 | Micromonospora vinacea DSM 101695 | Isolate | Unclassified |
| 179 | 2929219909 | Micromonospora sp. R-75348 Hybrid assembly | Isolate | Unclassified |
| 180 | 2929226422 | Micromonospora sp. R-74116 Hybrid assembly | Isolate | Unclassified |
| 181 | 2946064051 | Streptomyces luteogriseus W4I19-1 | Isolate | Rhizosphere |
| 182 | 2954380949 | Streptomyces ciscaucasicus W1I15 | Isolate | Rhizosphere |
| 183 | 2954673503 | Streptomyces sp. SAI-119 | Isolate | Rhizosphere |
| 184 | 2954682443 | Streptomyces sp. SAI-149 | Isolate | Rhizosphere |
| 185 | 2954691527 | Streptomyces sp. SAI-127 | Isolate | Rhizosphere |
| 186 | 2954701450 | Streptomyces sp. SAI-144 | Isolate | Rhizosphere |
| 187 | 2990044586 | Streptomyces sedi JCM 16909 | Isolate | Unclassified |
| 188 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 189 | 649633069 | Micromonospora sp. L5 | Isolate | Unclassified |
| 190 | 8001781756 | Catellatospora tritici NEAU-YM18 | Isolate | Rhizosphere |
| 191 | 8002784119 | Frankia sp. AgB1.9 | Isolate | Nodule |
| 192 | 8003830390 | Micromonospora parastrephiae STR1_7 | Isolate | Rhizosphere |
| 193 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
| 194 | 8048406513 | Streptomyces heilongjiangensis NEAU-W2 | Isolate | Unclassified |
| 195 | 8054727385 | Micromonospora alfalfae MED01 | Isolate | Nodule |
| 196 | 8054734606 | Micromonospora hortensis NIE111 | Isolate | Nodule |
| 197 | 8054913762 | Frankia gtarii Agncl-10 | Isolate | Nodule |
| 198 | 8055412473 | Micromonospora phytophila DSM 105363 | Isolate | Nodule |
| 199 | 8056829672 | Streptomyces barringtoniae JA03 | Isolate | Rhizosphere |
| 200 | 8057568493 | Actinorhabdospora filicis NBRC 111898 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 70.9 |
| Metatranscriptomes | 2.87 |
| Isolates | 26.23 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.82 |
| Nodule | 5.74 |
| Rhizoplane | 4.92 |
| Rhizosphere | 69.26 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0496104_0157596 | 3300048907 | Bacteria | 2179 |
| 2 | Ga0065707_10109173 | 3300005295 | Bacteria | 2479 |
| 3 | Ga0070658_10080012 | 3300005327 | Bacteria | 2683 |
| 4 | Ga0070683_100011428 | 3300005329 | Bacteria | 7674 |
| 5 | Ga0070683_100042262 | 3300005329 | Bacteria | 4197 |
| 6 | Ga0070680_100001509 | 3300005336 | Bacteria | 16944 |
| 7 | Ga0070682_100057004 | 3300005337 | Bacteria | 2460 |
| 8 | Ga0070668_100001346 | 3300005347 | Bacteria | 17574 |
| 9 | Ga0070669_100116158 | 3300005353 | Bacteria | 2036 |
| 10 | Ga0070659_100156714 | 3300005366 | Bacteria | 1860 |
| 11 | Ga0070714_100000006 | 3300005435 | Bacteria | 293311 |
| 12 | Ga0070681_10000004 | 3300005458 | Bacteria | 205157 |
| 13 | Ga0070681_10135583 | 3300005458 | Bacteria | 2392 |
| 14 | Ga0070679_100001642 | 3300005530 | Bacteria | 20141 |
| 15 | Ga0070679_100082908 | 3300005530 | Bacteria | 3196 |
| 16 | Ga0070684_100004596 | 3300005535 | Bacteria | 10524 |
| 17 | Ga0070684_100136216 | 3300005535 | Bacteria | 2218 |
| 18 | Ga0070684_100190698 | 3300005535 | Bacteria | 1865 |
| 19 | Ga0068859_100000119 | 3300005617 | Bacteria | 74778 |
| 20 | Ga0068864_100005166 | 3300005618 | Bacteria | 10690 |
| 21 | Ga0068863_100006617 | 3300005841 | Bacteria | 11377 |
| 22 | Ga0068858_100006939 | 3300005842 | Bacteria | 11009 |
| 23 | Ga0068862_100000166 | 3300005844 | Bacteria | 72987 |
| 24 | Ga0081455_10061530 | 3300005937 | Bacteria | 3159 |
| 25 | Ga0081540_1001276 | 3300005983 | Bacteria | 21966 |
| 26 | Ga0081540_1006162 | 3300005983 | Bacteria | 8796 |
| 27 | Ga0081539_10000031 | 3300005985 | Bacteria | 313232 |
| 28 | Ga0081539_10010360 | 3300005985 | Bacteria | 7586 |
| 29 | Ga0075428_100000304 | 3300006844 | Bacteria | 48365 |
| 30 | Ga0075428_100004395 | 3300006844 | Bacteria | 15563 |
| 31 | Ga0075430_100001144 | 3300006846 | Bacteria | 21152 |
| 32 | Ga0075431_100000395 | 3300006847 | Bacteria | 35082 |
| 33 | Ga0075429_100001175 | 3300006880 | Bacteria | 21152 |
| 34 | Ga0075429_100001187 | 3300006880 | Bacteria | 21049 |
| 35 | Ga0097620_100000119 | 3300006931 | Bacteria | 74778 |
| 36 | Ga0111539_10169478 | 3300009094 | Bacteria | 2551 |
| 37 | Ga0114129_10000016 | 3300009147 | Bacteria | 127415 |
| 38 | Ga0114129_10012574 | 3300009147 | Bacteria | 12052 |
| 39 | Ga0105242_10175512 | 3300009176 | Bacteria | 1886 |
| 40 | Ga0105248_10003208 | 3300009177 | Bacteria | 18139 |
| 41 | Ga0105248_10245577 | 3300009177 | Bacteria | 2015 |
| 42 | Ga0105249_10020515 | 3300009553 | Bacteria | 5906 |
| 43 | Ga0157375_10169617 | 3300013308 | Bacteria | 2329 |
| 44 | Ga0163163_10013008 | 3300014325 | Bacteria | 7601 |
| 45 | Ga0163163_10103114 | 3300014325 | Bacteria | 2877 |
| 46 | Ga0157380_10009034 | 3300014326 | Bacteria | 7120 |
| 47 | Ga0157379_10019422 | 3300014968 | Bacteria | 6002 |
| 48 | Ga0197907_10956094 | 3300020069 | Bacteria | 6253 |
| 49 | Ga0197907_11149987 | 3300020069 | Bacteria | 4911 |
| 50 | Ga0206356_10242923 | 3300020070 | Bacteria | 7947 |
| 51 | Ga0206350_10151149 | 3300020080 | Bacteria | 7562 |
| 52 | Ga0206354_10837704 | 3300020081 | Bacteria | 4039 |
| 53 | Ga0206353_10975235 | 3300020082 | Bacteria | 8938 |
| 54 | Ga0213876_10000787 | 3300021384 | Bacteria | 21553 |
| 55 | Ga0213875_10001085 | 3300021388 | Bacteria | 18924 |
| 56 | Ga0207710_10000073 | 3300025900 | Bacteria | 150308 |
| 57 | Ga0207710_10073223 | 3300025900 | Bacteria | 1575 |
| 58 | Ga0207699_10052270 | 3300025906 | Bacteria | 2418 |
| 59 | Ga0207699_10061069 | 3300025906 | Bacteria | 2266 |
| 60 | Ga0207705_10000473 | 3300025909 | Bacteria | 34432 |
| 61 | Ga0207705_10130191 | 3300025909 | Bacteria | 1872 |
| 62 | Ga0207707_10000242 | 3300025912 | Bacteria | 59524 |
| 63 | Ga0207707_10115832 | 3300025912 | Bacteria | 2342 |
| 64 | Ga0207693_10058180 | 3300025915 | Bacteria | 3028 |
| 65 | Ga0207660_10000632 | 3300025917 | Bacteria | 23667 |
| 66 | Ga0207660_10112826 | 3300025917 | Bacteria | 2048 |
| 67 | Ga0207660_10145438 | 3300025917 | Bacteria | 1816 |
| 68 | Ga0207657_10071437 | 3300025919 | Bacteria | 2939 |
| 69 | Ga0207649_10029776 | 3300025920 | Bacteria | 3227 |
| 70 | Ga0207652_10000233 | 3300025921 | Bacteria | 58455 |
| 71 | Ga0207664_10000032 | 3300025929 | Bacteria | 179232 |
| 72 | Ga0207711_10000400 | 3300025941 | Bacteria | 45796 |
| 73 | Ga0207711_10002078 | 3300025941 | Bacteria | 18085 |
| 74 | Ga0207661_10036710 | 3300025944 | Bacteria | 3827 |
| 75 | Ga0207712_10010523 | 3300025961 | Bacteria | 5871 |
| 76 | Ga0207677_10034219 | 3300026023 | Bacteria | 3288 |
| 77 | Ga0207708_10000082 | 3300026075 | Bacteria | 74440 |
| 78 | Ga0207641_10007961 | 3300026088 | Bacteria | 8783 |
| 79 | Ga0207676_10010939 | 3300026095 | Bacteria | 6476 |
| 80 | Ga0207676_10133982 | 3300026095 | Bacteria | 2111 |
| 81 | Ga0207676_10205979 | 3300026095 | Bacteria | 1741 |
| 82 | Ga0207674_10006592 | 3300026116 | Bacteria | 13649 |
| 83 | Ga0207683_10077155 | 3300026121 | Bacteria | 2951 |
| 84 | Ga0268266_10041968 | 3300028379 | Bacteria | 3906 |
| 85 | Ga0268266_10059872 | 3300028379 | Bacteria | 3281 |
| 86 | Ga0268265_10000069 | 3300028380 | Bacteria | 141036 |
| 87 | Ga0307515_10036635 | 3300028794 | Bacteria | 7927 |
| 88 | Ga0307508_10000287 | 3300031616 | Bacteria | 61945 |
| 89 | Ga0307508_10075577 | 3300031616 | Bacteria | 2946 |
| 90 | Ga0307416_100035934 | 3300032002 | Bacteria | 3792 |
| 91 | Ga0307416_100056050 | 3300032002 | Bacteria | 3178 |
| 92 | Ga0307416_100082609 | 3300032002 | Bacteria | 2722 |
| 93 | Ga0307411_10098196 | 3300032005 | Bacteria | 2063 |
| 94 | Ga0307415_100013010 | 3300032126 | Bacteria | 4839 |
| 95 | Ga0307415_100093660 | 3300032126 | Bacteria | 2182 |
| 96 | Ga0307507_10029029 | 3300033179 | Bacteria | 5875 |
| 97 | Ga0316587_1005028 | 3300033529 | Bacteria | 1958 |
| 98 | Ga0373951_0000068 | 3300035091 | Bacteria | 41054 |
| 99 | Ga0373956_0000463 | 3300035119 | Bacteria | 16663 |
| 100 | Ga0373935_0022501 | 3300035692 | Bacteria | 3866 |
| 101 | Ga0395900_0091029 | 3300037418 | Bacteria | 3135 |
| 102 | Ga0395900_0106702 | 3300037418 | Bacteria | 2877 |
| 103 | Ga0395900_0123898 | 3300037418 | Bacteria | 2651 |
| 104 | Ga0395898_0009184 | 3300037466 | Bacteria | 10408 |
| 105 | Ga0395898_0043962 | 3300037466 | Bacteria | 4400 |
| 106 | Ga0395898_0264914 | 3300037466 | Bacteria | 1639 |
| 107 | Ga0395905_0071953 | 3300037471 | Bacteria | 3241 |
| 108 | Ga0436364_1297258 | 3300037853 | Bacteria | 42934 |
| 109 | Ga0395901_0008305 | 3300038443 | Bacteria | 10493 |
| 110 | Ga0395901_0066864 | 3300038443 | Bacteria | 3743 |
| 111 | Ga0436365_0186013 | 3300039437 | Bacteria | 26723 |
| 112 | Ga0439433_0000788 | 3300041999 | Bacteria | 6260 |
| 113 | Ga0439449_0000874 | 3300042007 | Bacteria | 11757 |
| 114 | Ga0451577_0067732 | 3300042876 | Bacteria | 3184 |
| 115 | Ga0466972_0014235 | 3300044658 | Bacteria | 3985 |
| 116 | Ga0466966_0040723 | 3300044684 | Bacteria | 2989 |
| 117 | Ga0466961_0015785 | 3300044693 | Bacteria | 4846 |
| 118 | Ga0466959_0036034 | 3300045049 | Bacteria | 3656 |
| 119 | Ga0466967_0091992 | 3300045976 | Bacteria | 2757 |
| 120 | Ga0466967_0101378 | 3300045976 | Bacteria | 2631 |
| 121 | Ga0466967_0117902 | 3300045976 | Bacteria | 2448 |
| 122 | Ga0495594_0019909 | 3300046499 | Bacteria | 3570 |
| 123 | Ga0495608_0054330 | 3300046511 | Bacteria | 2648 |
| 124 | Ga0495610_0023329 | 3300046512 | Bacteria | 3367 |
| 125 | Ga0495668_0000201 | 3300046616 | Bacteria | 87218 |
| 126 | Ga0495634_0052041 | 3300046642 | Bacteria | 2746 |
| 127 | Ga0495625_0001009 | 3300046660 | Bacteria | 37143 |
| 128 | Ga0495588_0002564 | 3300046674 | Bacteria | 7768 |
| 129 | Ga0495589_0030694 | 3300046794 | Bacteria | 2706 |
| 130 | Ga0495636_0058972 | 3300047318 | Bacteria | 1619 |
| 131 | Ga0495626_0000090 | 3300048091 | Bacteria | 119019 |
| 132 | Ga0496101_0052690 | 3300048904 | Bacteria | 2935 |
| 133 | Ga0496104_0080052 | 3300048907 | Bacteria | 3114 |
| 134 | Ga0496108_0043093 | 3300048911 | Bacteria | 3769 |
| 135 | Ga0496108_0074089 | 3300048911 | Bacteria | 2874 |
| 136 | Ga0496109_0018210 | 3300048912 | Bacteria | 6167 |
| 137 | Ga0496110_0026706 | 3300048913 | Bacteria | 4944 |
| 138 | Ga0496111_0081360 | 3300048914 | Bacteria | 2364 |
| 139 | Ga0496112_0061830 | 3300048915 | Bacteria | 3692 |
| 140 | Ga0496112_0072201 | 3300048915 | Bacteria | 3412 |
| 141 | Ga0496113_0001477 | 3300048916 | Bacteria | 13122 |
| 142 | Ga0496114_0007544 | 3300048917 | Bacteria | 8604 |
| 143 | Ga0496116_0000292 | 3300048919 | Bacteria | 85239 |
| 144 | Ga0496118_0003238 | 3300048921 | Bacteria | 20761 |
| 145 | Ga0496118_0007061 | 3300048921 | Bacteria | 12071 |
| 146 | Ga0496119_0000556 | 3300048922 | Bacteria | 50537 |
| 147 | Ga0496119_0031092 | 3300048922 | Bacteria | 3587 |
| 148 | Ga0496120_0000120 | 3300048923 | Bacteria | 131625 |
| 149 | Ga0501299_006045 | 3300049522 | Bacteria | 1886 |
| 150 | Ga0501034_0001572 | 3300049571 | Bacteria | 29851 |
| 151 | Ga0501041_0018144 | 3300049577 | Bacteria | 4191 |
| 152 | Ga0501046_0140179 | 3300049580 | Bacteria | 1830 |
| 153 | Ga0501048_0049732 | 3300049582 | Bacteria | 2987 |
| 154 | Ga0501072_0017683 | 3300049588 | Bacteria | 5483 |
| 155 | Ga0501074_0024884 | 3300049590 | Bacteria | 4349 |
| 156 | Ga0501076_0015769 | 3300049592 | Bacteria | 5715 |
| 157 | Ga0501202_000837 | 3300049652 | Bacteria | 4662 |
| 158 | Ga0501217_000705 | 3300049661 | Bacteria | 5740 |
| 159 | Ga0501222_001573 | 3300049662 | Bacteria | 3177 |
| 160 | Ga0501223_002036 | 3300049663 | Bacteria | 4534 |
| 161 | Ga0501224_000863 | 3300049664 | Bacteria | 3889 |
| 162 | Ga0501235_001846 | 3300049669 | Bacteria | 4528 |
| 163 | Ga0501243_000765 | 3300049675 | Bacteria | 4458 |
| 164 | Ga0501221_001850 | 3300049704 | Bacteria | 3529 |
| 165 | Ga0501225_0002778 | 3300049705 | Bacteria | 5373 |
| 166 | Ga0501044_0019289 | 3300049823 | Bacteria | 7297 |
| 167 | Ga0501212_001308 | 3300049851 | Bacteria | 2779 |
| 168 | nmdc:mga05p37_141434_c1 | 3300050507 | Bacteria | 2530 |
| 169 | nmdc:mga05p37_155_c1 | 3300050507 | Bacteria | 65410 |
| 170 | nmdc:mga09592_134424_c1 | 3300050508 | Bacteria | 2130 |
| 171 | nmdc:mga09592_187639_c1 | 3300050508 | Bacteria | 1789 |
| 172 | nmdc:mga09592_1_c1 | 3300050508 | Bacteria | 201102 |
| 173 | nmdc:mga0qj67_12_c1 | 3300050509 | Bacteria | 76377 |
| 174 | nmdc:mga0qj67_2464_c1 | 3300050509 | Bacteria | 13183 |
| 175 | nmdc:mga06r32_4788_c1 | 3300050510 | Bacteria | 12177 |
| 176 | nmdc:mga06r32_7_c1 | 3300050510 | Bacteria | 117700 |
| 177 | Ga0500646_0000810 | 3300053090 | Bacteria | 8679 |
| 178 | Ga0500600_0064527 | 3300053149 | Bacteria | 2029 |
| 179 | Ga0501082_0011028 | 3300060353 | Bacteria | 7772 |
| 180 | Ga0530510_0072732 | 3300061734 | Bacteria | 2495 |
| 181 | 2501939984 | 2501939600 | Bacteria | 6907073 |
| 182 | 2508677687 | 2508501039 | Bacteria | 9978592 |
| 183 | 2517759317 | 2517572101 | Bacteria | 6884336 |
| 184 | 2585307627 | 2582581313 | Bacteria | 10042643 |
| 185 | 2616694053 | 2616644814 | Bacteria | 11555299 |
| 186 | 2619856191 | 2619618881 | Bacteria | 7521104 |
| 187 | 2620350072 | 2619619003 | Bacteria | 7619552 |
| 188 | 2644270899 | 2643221647 | Bacteria | 10741251 |
| 189 | 2676199653 | 2675902999 | Bacteria | 9438463 |
| 190 | 2676485174 | 2675903059 | Bacteria | 8644972 |
| 191 | 2686538533 | 2684623035 | Bacteria | 8032739 |
| 192 | 2689956473 | 2687453737 | Bacteria | 11203906 |
| 193 | 2689990122 | 2687453743 | Bacteria | 8361025 |
| 194 | 2753268168 | 2751185782 | Bacteria | 11227053 |
| 195 | 2772646995 | 2772190715 | Bacteria | 6959372 |
| 196 | 2774844231 | 2773857921 | Bacteria | 9435764 |
| 197 | 2785345178 | 2784746763 | Bacteria | 9783172 |
| 198 | 2785367708 | 2784746768 | Bacteria | 10036182 |
| 199 | 2786668763 | 2786546132 | Bacteria | 10419719 |
| 200 | 2812359819 | 2811994879 | Bacteria | 9313447 |
| 201 | 2831937384 | 2831935698 | Bacteria | 5963223 |
| 202 | 2832008221 | 2832004796 | Bacteria | 6538017 |
| 203 | 2852638203 | 2852635781 | Bacteria | 8251373 |
| 204 | 2855675290 | 2855670206 | Bacteria | 7120389 |
| 205 | 2855680041 | 2855676851 | Bacteria | 7063653 |
| 206 | 2855688677 | 2855683550 | Bacteria | 7134265 |
| 207 | 2856864328 | 2856858025 | Bacteria | 7255264 |
| 208 | 2857290146 | 2857288857 | Bacteria | 7189066 |
| 209 | 2858852792 | 2858848962 | Bacteria | 6963058 |
| 210 | 2858885787 | 2858882152 | Bacteria | 7230291 |
| 211 | 2858892984 | 2858888857 | Bacteria | 7060307 |
| 212 | 2858897921 | 2858895516 | Bacteria | 7378898 |
| 213 | 2858906661 | 2858902515 | Bacteria | 7086037 |
| 214 | 2861523799 | 2861520306 | Bacteria | 8348283 |
| 215 | 2866067942 | 2866065130 | Bacteria | 6518152 |
| 216 | 2867430635 | 2867428634 | Bacteria | 9590268 |
| 217 | 2867511912 | 2867507094 | Bacteria | 6506033 |
| 218 | 2869054672 | 2869048445 | Bacteria | 6875584 |
| 219 | 2869065017 | 2869061728 | Bacteria | 7112407 |
| 220 | 2869074840 | 2869068681 | Bacteria | 7205615 |
| 221 | 2880489850 | 2880489317 | Bacteria | 7096270 |
| 222 | 2880502736 | 2880495981 | Bacteria | 7340502 |
| 223 | 2929224536 | 2929219909 | Bacteria | 6984360 |
| 224 | 2929232530 | 2929226422 | Bacteria | 7248583 |
| 225 | 2946066089 | 2946064051 | Bacteria | 8957905 |
| 226 | 2954388034 | 2954380949 | Bacteria | 10050426 |
| 227 | 2954675043 | 2954673503 | Bacteria | 9685905 |
| 228 | 2954689092 | 2954682443 | Bacteria | 9862841 |
| 229 | 2954698844 | 2954691527 | Bacteria | 10720516 |
| 230 | 2954703378 | 2954701450 | Bacteria | 10834262 |
| 231 | 2990044731 | 2990044586 | Bacteria | 6603797 |
| 232 | 2996223121 | 2996221748 | Bacteria | 6799777 |
| 233 | 649814144 | 649633069 | Bacteria | 6962533 |
| 234 | 8001789793 | 8001781756 | Bacteria | 9586736 |
| 235 | 8002790712 | 8002784119 | Bacteria | 9788632 |
| 236 | 8003837142 | 8003830390 | Bacteria | 6541657 |
| 237 | 8047716903 | 8047710418 | Bacteria | 11023148 |
| 238 | 8048407729 | 8048406513 | Bacteria | 8936924 |
| 239 | 8054727728 | 8054727385 | Bacteria | 7558670 |
| 240 | 8054737402 | 8054734606 | Bacteria | 6947278 |
| 241 | 8054919993 | 8054913762 | Bacteria | 7713009 |
| 242 | 8055418337 | 8055412473 | Bacteria | 6257500 |
| 243 | 8056833110 | 8056829672 | Bacteria | 9045328 |
| 244 | 8057572209 | 8057568493 | Bacteria | 7221719 |
| 245 | Ga0496104_0157596 | |||
| 246 | Ga0065707_10109173 | |||
| 247 | Ga0070658_10080012 | |||
| 248 | Ga0070683_100011428 | |||
| 249 | Ga0070683_100042262 | |||
| 250 | Ga0070680_100001509 | |||
| 251 | Ga0070682_100057004 | |||
| 252 | Ga0070668_100001346 | |||
| 253 | Ga0070669_100116158 | |||
| 254 | Ga0070659_100156714 | |||
| 255 | Ga0070714_100000006 | |||
| 256 | Ga0070681_10000004 | |||
| 257 | Ga0070681_10135583 | |||
| 258 | Ga0070679_100001642 | |||
| 259 | Ga0070679_100082908 | |||
| 260 | Ga0070684_100004596 | |||
| 261 | Ga0070684_100136216 | |||
| 262 | Ga0070684_100190698 | |||
| 263 | Ga0068859_100000119 | |||
| 264 | Ga0068864_100005166 | |||
| 265 | Ga0068863_100006617 | |||
| 266 | Ga0068858_100006939 | |||
| 267 | Ga0068862_100000166 | |||
| 268 | Ga0081455_10061530 | |||
| 269 | Ga0081540_1001276 | |||
| 270 | Ga0081540_1006162 | |||
| 271 | Ga0081539_10000031 | |||
| 272 | Ga0081539_10010360 | |||
| 273 | Ga0075428_100000304 | |||
| 274 | Ga0075428_100004395 | |||
| 275 | Ga0075430_100001144 | |||
| 276 | Ga0075431_100000395 | |||
| 277 | Ga0075429_100001175 | |||
| 278 | Ga0075429_100001187 | |||
| 279 | Ga0097620_100000119 | |||
| 280 | Ga0111539_10169478 | |||
| 281 | Ga0114129_10000016 | |||
| 282 | Ga0114129_10012574 | |||
| 283 | Ga0105242_10175512 | |||
| 284 | Ga0105248_10003208 | |||
| 285 | Ga0105248_10245577 | |||
| 286 | Ga0105249_10020515 | |||
| 287 | Ga0157375_10169617 | |||
| 288 | Ga0163163_10013008 | |||
| 289 | Ga0163163_10103114 | |||
| 290 | Ga0157380_10009034 | |||
| 291 | Ga0157379_10019422 | |||
| 292 | Ga0197907_10956094 | |||
| 293 | Ga0197907_11149987 | |||
| 294 | Ga0206356_10242923 | |||
| 295 | Ga0206350_10151149 | |||
| 296 | Ga0206354_10837704 | |||
| 297 | Ga0206353_10975235 | |||
| 298 | Ga0213876_10000787 | |||
| 299 | Ga0213875_10001085 | |||
| 300 | Ga0207710_10000073 | |||
| 301 | Ga0207710_10073223 | |||
| 302 | Ga0207699_10052270 | |||
| 303 | Ga0207699_10061069 | |||
| 304 | Ga0207705_10000473 | |||
| 305 | Ga0207705_10130191 | |||
| 306 | Ga0207707_10000242 | |||
| 307 | Ga0207707_10115832 | |||
| 308 | Ga0207693_10058180 | |||
| 309 | Ga0207660_10000632 | |||
| 310 | Ga0207660_10112826 | |||
| 311 | Ga0207660_10145438 | |||
| 312 | Ga0207657_10071437 | |||
| 313 | Ga0207649_10029776 | |||
| 314 | Ga0207652_10000233 | |||
| 315 | Ga0207664_10000032 | |||
| 316 | Ga0207711_10000400 | |||
| 317 | Ga0207711_10002078 | |||
| 318 | Ga0207661_10036710 | |||
| 319 | Ga0207712_10010523 | |||
| 320 | Ga0207677_10034219 | |||
| 321 | Ga0207708_10000082 | |||
| 322 | Ga0207641_10007961 | |||
| 323 | Ga0207676_10010939 | |||
| 324 | Ga0207676_10133982 | |||
| 325 | Ga0207676_10205979 | |||
| 326 | Ga0207674_10006592 | |||
| 327 | Ga0207683_10077155 | |||
| 328 | Ga0268266_10041968 | |||
| 329 | Ga0268266_10059872 | |||
| 330 | Ga0268265_10000069 | |||
| 331 | Ga0307515_10036635 | |||
| 332 | Ga0307508_10000287 | |||
| 333 | Ga0307508_10075577 | |||
| 334 | Ga0307416_100035934 | |||
| 335 | Ga0307416_100056050 | |||
| 336 | Ga0307416_100082609 | |||
| 337 | Ga0307411_10098196 | |||
| 338 | Ga0307415_100013010 | |||
| 339 | Ga0307415_100093660 | |||
| 340 | Ga0307507_10029029 | |||
| 341 | Ga0316587_1005028 | |||
| 342 | Ga0373951_0000068 | |||
| 343 | Ga0373956_0000463 | |||
| 344 | Ga0373935_0022501 | |||
| 345 | Ga0395900_0091029 | |||
| 346 | Ga0395900_0106702 | |||
| 347 | Ga0395900_0123898 | |||
| 348 | Ga0395898_0009184 | |||
| 349 | Ga0395898_0043962 | |||
| 350 | Ga0395898_0264914 | |||
| 351 | Ga0395905_0071953 | |||
| 352 | Ga0436364_1297258 | |||
| 353 | Ga0395901_0008305 | |||
| 354 | Ga0395901_0066864 | |||
| 355 | Ga0436365_0186013 | |||
| 356 | Ga0439433_0000788 | |||
| 357 | Ga0439449_0000874 | |||
| 358 | Ga0451577_0067732 | |||
| 359 | Ga0466972_0014235 | |||
| 360 | Ga0466966_0040723 | |||
| 361 | Ga0466961_0015785 | |||
| 362 | Ga0466959_0036034 | |||
| 363 | Ga0466967_0091992 | |||
| 364 | Ga0466967_0101378 | |||
| 365 | Ga0466967_0117902 | |||
| 366 | Ga0495594_0019909 | |||
| 367 | Ga0495608_0054330 | |||
| 368 | Ga0495610_0023329 | |||
| 369 | Ga0495668_0000201 | |||
| 370 | Ga0495634_0052041 | |||
| 371 | Ga0495625_0001009 | |||
| 372 | Ga0495588_0002564 | |||
| 373 | Ga0495589_0030694 | |||
| 374 | Ga0495636_0058972 | |||
| 375 | Ga0495626_0000090 | |||
| 376 | Ga0496101_0052690 | |||
| 377 | Ga0496104_0080052 | |||
| 378 | Ga0496108_0043093 | |||
| 379 | Ga0496108_0074089 | |||
| 380 | Ga0496109_0018210 | |||
| 381 | Ga0496110_0026706 | |||
| 382 | Ga0496111_0081360 | |||
| 383 | Ga0496112_0061830 | |||
| 384 | Ga0496112_0072201 | |||
| 385 | Ga0496113_0001477 | |||
| 386 | Ga0496114_0007544 | |||
| 387 | Ga0496116_0000292 | |||
| 388 | Ga0496118_0003238 | |||
| 389 | Ga0496118_0007061 | |||
| 390 | Ga0496119_0000556 | |||
| 391 | Ga0496119_0031092 | |||
| 392 | Ga0496120_0000120 | |||
| 393 | Ga0501299_006045 | |||
| 394 | Ga0501034_0001572 | |||
| 395 | Ga0501041_0018144 | |||
| 396 | Ga0501046_0140179 | |||
| 397 | Ga0501048_0049732 | |||
| 398 | Ga0501072_0017683 | |||
| 399 | Ga0501074_0024884 | |||
| 400 | Ga0501076_0015769 | |||
| 401 | Ga0501202_000837 | |||
| 402 | Ga0501217_000705 | |||
| 403 | Ga0501222_001573 | |||
| 404 | Ga0501223_002036 | |||
| 405 | Ga0501224_000863 | |||
| 406 | Ga0501235_001846 | |||
| 407 | Ga0501243_000765 | |||
| 408 | Ga0501221_001850 | |||
| 409 | Ga0501225_0002778 | |||
| 410 | Ga0501044_0019289 | |||
| 411 | Ga0501212_001308 | |||
| 412 | nmdc:mga05p37_141434_c1 | |||
| 413 | nmdc:mga05p37_155_c1 | |||
| 414 | nmdc:mga09592_134424_c1 | |||
| 415 | nmdc:mga09592_187639_c1 | |||
| 416 | nmdc:mga09592_1_c1 | |||
| 417 | nmdc:mga0qj67_12_c1 | |||
| 418 | nmdc:mga0qj67_2464_c1 | |||
| 419 | nmdc:mga06r32_4788_c1 | |||
| 420 | nmdc:mga06r32_7_c1 | |||
| 421 | Ga0500646_0000810 | |||
| 422 | Ga0500600_0064527 | |||
| 423 | Ga0501082_0011028 | |||
| 424 | Ga0530510_0072732 | |||
| 425 | 2501939984 | |||
| 426 | 2508677687 | |||
| 427 | 2517759317 | |||
| 428 | 2585307627 | |||
| 429 | 2616694053 | |||
| 430 | 2619856191 | |||
| 431 | 2620350072 | |||
| 432 | 2644270899 | |||
| 433 | 2676199653 | |||
| 434 | 2676485174 | |||
| 435 | 2686538533 | |||
| 436 | 2689956473 | |||
| 437 | 2689990122 | |||
| 438 | 2753268168 | |||
| 439 | 2772646995 | |||
| 440 | 2774844231 | |||
| 441 | 2785345178 | |||
| 442 | 2785367708 | |||
| 443 | 2786668763 | |||
| 444 | 2812359819 | |||
| 445 | 2831937384 | |||
| 446 | 2832008221 | |||
| 447 | 2852638203 | |||
| 448 | 2855675290 | |||
| 449 | 2855680041 | |||
| 450 | 2855688677 | |||
| 451 | 2856864328 | |||
| 452 | 2857290146 | |||
| 453 | 2858852792 | |||
| 454 | 2858885787 | |||
| 455 | 2858892984 | |||
| 456 | 2858897921 | |||
| 457 | 2858906661 | |||
| 458 | 2861523799 | |||
| 459 | 2866067942 | |||
| 460 | 2867430635 | |||
| 461 | 2867511912 | |||
| 462 | 2869054672 | |||
| 463 | 2869065017 | |||
| 464 | 2869074840 | |||
| 465 | 2880489850 | |||
| 466 | 2880502736 | |||
| 467 | 2929224536 | |||
| 468 | 2929232530 | |||
| 469 | 2946066089 | |||
| 470 | 2954388034 | |||
| 471 | 2954675043 | |||
| 472 | 2954689092 | |||
| 473 | 2954698844 | |||
| 474 | 2954703378 | |||
| 475 | 2990044731 | |||
| 476 | 2996223121 | |||
| 477 | 649814144 | |||
| 478 | 8001789793 | |||
| 479 | 8002790712 | |||
| 480 | 8003837142 | |||
| 481 | 8047716903 | |||
| 482 | 8048407729 | |||
| 483 | 8054727728 | |||
| 484 | 8054737402 | |||
| 485 | 8054919993 | |||
| 486 | 8055418337 | |||
| 487 | 8056833110 | |||
| 488 | 8057572209 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7xhl-assembly1.cif.gz_D | complex structure of a glucose 6-phosphate dehydrogenase from zymomonas mobilis | 0.9404 | 21 | 514 |
| 7xhl-assembly2.cif.gz_H | complex structure of a glucose 6-phosphate dehydrogenase from zymomonas mobilis | 0.9361 | 21 | 514 |
| 7xhl-assembly1.cif.gz_D | complex structure of a glucose 6-phosphate dehydrogenase from zymomonas mobilis | 0.9348 | 21 | 514 |
| 1h93-assembly1.cif.gz_A | active mutant (s215->c) of glucose 6-phosphate dehydrogenase from leuconostoc mesenteroides | 0.9313 | 20 | 513 |
| 5ukw-assembly1.cif.gz_A | crystal structure of human glucose 6-phosphate dehydrogenase mutant (a277c) complexed with g6p | 0.9312 | 21 | 512 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WN73_32_206_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9754 | 28 | 202 | 3.40.50.720 |
| af_P9WN73_32_206_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9645 | 28 | 202 | 3.40.50.720 |
| af_Q2FY66_6_179_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9574 | 21 | 199 | 3.40.50.720 |
| 1e7mA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9537 | 23 | 199 | 3.40.50.720 |
| af_Q2FY66_6_179_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9467 | 21 | 199 | 3.40.50.720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2V9L8L6-F1-model_v4 | Glucose-6-phosphate dehydrogenase | 0.9794 | 238 | 379 |
GO:0004345
GO:0005829 GO:0006006 GO:0009051 GO:0050661 |
| AF-A0A359LTK9-F1-model_v4 | Glucose-6-phosphate dehydrogenase | 0.9767 | 27 | 203 |
GO:0004345
GO:0005829 GO:0006006 GO:0009051 GO:0050661 |
| AF-A0A524IB59-F1-model_v4 | Glucose-6-phosphate dehydrogenase | 0.9739 | 14 | 156 |
GO:0004345
GO:0005829 GO:0006006 GO:0009051 GO:0050661 |
| AF-A0A4V3BAD6-F1-model_v4 | deleted | 0.9715 | 22 | 125 |
|
| AF-A0A2V9L8L6-F1-model_v4 | Glucose-6-phosphate dehydrogenase | 0.966 | 238 | 379 |
GO:0004345
GO:0005829 GO:0006006 GO:0009051 GO:0050661 |