F355742

General Info

Members Datasets Scaffolds Average Seq Length
243 184 234 309

Family's Representative Sequence

Representative Sequence 3300031911|Ga0307412_10008552|Ga0307412_100085523
Length 329
Sequence MTPLADPPALPADRNENTMQRRRPKHILLVTGMSGAGKSTVLRTLEDLGWEIVDNLPLLLLNRLLDTDPASHAGDDERPLALGLGTQTRGFDAESIVQRIKKLREEQGLDVGTLFLECTGAELVRRFSETRRRHPLAQDRPAEDGIARERELLGPLRRWSNRLIDTTDMTANQLAQTVRTIFSSDGTGKTTFSVTSFGFSRGLPRDADLVLDMRFLRNPHWDEALRPGTGLDADVSAYIAADPAYDAAMAQIESLLLLLLPRYQAEGKSYVTIAIGCTGGRHRSVHVAERIGRRLRDAGFSPTVTHRDLQTAPQDSLEGAPVSMARGGE

Samples

Sample ID Description Type Environment
1 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
2 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
3 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
4 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
5 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
6 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
7 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
8 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
9 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
10 3300000041 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere Metagenome Rhizosphere
11 3300000043 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere Metagenome Rhizosphere
12 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
13 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
14 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
15 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
16 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
17 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
18 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
19 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
20 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
21 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
22 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
25 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
26 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
35 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
36 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
71 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
72 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
73 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
74 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
79 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
81 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
106 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
109 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
110 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
114 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
115 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
118 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
119 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
120 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
121 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
122 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
123 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
124 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
125 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
126 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
129 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
130 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
131 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
134 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
135 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
136 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
137 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
138 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
139 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
140 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
141 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
168 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
169 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
170 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
175 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
176 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
177 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
180 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
181 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
182 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
183 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
184 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.88
Metatranscriptomes 0.41
Isolates 3.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.93
Nodule 0
Rhizoplane 1.23
Rhizosphere 66.26
Stem 0
Stem Tuber 0
Unclassified 6.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 ARcpr5oldR_c001965 3300000041 Bacteria 1963
2 ARcpr5yngRDRAFT_c001341 3300000043 Bacteria 2726
3 JGI25150J39212_1000319 3300002774 Bacteria 23638
4 JGI25165J46597_1000032 3300003214 Bacteria 294371
5 JGI25153J46596_10020474 3300003215 Bacteria 2500
6 rootL2_10023904 3300003322 Bacteria 3475
7 Ga0055526_1037561 3300003771 Bacteria 1264
8 Ga0055537_1000317 3300003773 Bacteria 32918
9 Ga0055537_1001489 3300003773 Bacteria 9020
10 Ga0055524_1000149 3300003775 Bacteria 82511
11 Ga0055536_1029473 3300003781 Bacteria 1474
12 Ga0055530_10000060 3300003791 Bacteria 95767
13 Ga0055530_10008098 3300003791 Bacteria 4278
14 Ga0055530_10015799 3300003791 Bacteria 2443
15 Ga0055530_10025079 3300003791 Bacteria 1674
16 Ga0055540_1021030 3300003792 Bacteria 1707
17 Ga0055531_10000049 3300003794 Bacteria 130662
18 Ga0055531_10003830 3300003794 Bacteria 9427
19 Ga0065165_1002598 3300005262 Bacteria 14805
20 Ga0070683_100060533 3300005329 Bacteria 3519
21 Ga0068869_100112711 3300005334 Bacteria 2071
22 Ga0070666_10009817 3300005335 Bacteria 5979
23 Ga0068868_100001536 3300005338 Bacteria 15801
24 Ga0070660_100005075 3300005339 Bacteria 9098
25 Ga0070668_100010932 3300005347 Bacteria 6752
26 Ga0070669_100145995 3300005353 Bacteria 1828
27 Ga0070675_100108286 3300005354 Bacteria 2347
28 Ga0070659_100000001 3300005366 Bacteria 576390
29 Ga0070667_100000062 3300005367 Bacteria 143729
30 Ga0070701_10014370 3300005438 Bacteria 3628
31 Ga0070700_100029620 3300005441 Bacteria 3265
32 Ga0070694_100187777 3300005444 Bacteria 1533
33 Ga0068853_100182662 3300005539 Bacteria 1903
34 Ga0070686_100001036 3300005544 Bacteria 15994
35 Ga0070693_100185981 3300005547 Bacteria 1340
36 Ga0070665_100000075 3300005548 Bacteria 189496
37 Ga0068852_100081943 3300005616 Bacteria 2866
38 Ga0068859_100004807 3300005617 Bacteria 13755
39 Ga0068861_100000968 3300005719 Bacteria 17516
40 Ga0068863_100000054 3300005841 Bacteria 124495
41 Ga0068863_100038971 3300005841 Bacteria 4522
42 Ga0081540_1042588 3300005983 Bacteria 2340
43 Ga0075368_10000074 3300006042 Bacteria 23851
44 Ga0075367_10001673 3300006178 Bacteria 9680
45 Ga0075428_100045728 3300006844 Bacteria 4810
46 Ga0075434_100101096 3300006871 Bacteria 2890
47 Ga0075429_100024670 3300006880 Bacteria 5219
48 Ga0097620_100004807 3300006931 Bacteria 13755
49 Ga0105240_10299111 3300009093 Bacteria 1841
50 Ga0111539_10023855 3300009094 Bacteria 7514
51 Ga0111539_10242226 3300009094 Bacteria 2100
52 Ga0111539_10415619 3300009094 Bacteria 1567
53 Ga0105245_10038693 3300009098 Bacteria 4244
54 Ga0114129_10030496 3300009147 Bacteria 7629
55 Ga0105243_10114330 3300009148 Bacteria 2265
56 Ga0105241_10269112 3300009174 Bacteria 1451
57 Ga0105248_10003049 3300009177 Bacteria 18581
58 Ga0105248_10058137 3300009177 Bacteria 4342
59 Ga0105237_10052621 3300009545 Bacteria 4086
60 Ga0105238_10187550 3300009551 Bacteria 2044
61 Ga0157371_10078506 3300013102 Bacteria 2338
62 Ga0157378_10131154 3300013297 Bacteria 2320
63 Ga0163162_10128022 3300013306 Bacteria 2647
64 Ga0157375_10243248 3300013308 Bacteria 1959
65 Ga0157375_10849220 3300013308 Bacteria 1060
66 Ga0163163_10321984 3300014325 Bacteria 1600
67 Ga0157380_10023574 3300014326 Bacteria 4644
68 Ga0157380_10227749 3300014326 Bacteria 1672
69 Ga0157379_10235963 3300014968 Bacteria 1658
70 Ga0206356_11162962 3300020070 Bacteria 3677
71 Ga0213876_10030983 3300021384 Bacteria 2823
72 Ga0209436_108765 3300025208 Bacteria 1981
73 Ga0207425_1000022 3300025245 Bacteria 355305
74 Ga0207425_1010309 3300025245 Bacteria 2280
75 Ga0209129_1000573 3300025258 Bacteria 25384
76 Ga0209233_1000066 3300025261 Bacteria 381218
77 Ga0209565_1000010 3300025263 Bacteria 687724
78 Ga0209565_1000099 3300025263 Bacteria 131080
79 Ga0209565_1011051 3300025263 Bacteria 2214
80 Ga0209455_1011770 3300025272 Bacteria 2135
81 Ga0209673_1001990 3300025273 Bacteria 15816
82 Ga0209673_1007924 3300025273 Bacteria 4801
83 Ga0209676_1017669 3300025292 Bacteria 2515
84 Ga0209025_1001210 3300025294 Bacteria 36189
85 Ga0209564_1008563 3300025295 Bacteria 5023
86 Ga0209758_1000004 3300025297 Bacteria 1375322
87 Ga0209758_1019716 3300025297 Bacteria 3234
88 Ga0209758_1027954 3300025297 Bacteria 2398
89 Ga0209050_1000001 3300025298 Bacteria 3563507
90 Ga0209050_1000010 3300025298 Bacteria 980454
91 Ga0209050_1006928 3300025298 Bacteria 6540
92 Ga0209256_1000034 3300025299 Bacteria 388475
93 Ga0209051_1000450 3300025303 Bacteria 54435
94 Ga0209257_1000009 3300025304 Bacteria 1205047
95 Ga0209257_1000872 3300025304 Bacteria 42806
96 Ga0209257_1000921 3300025304 Bacteria 40974
97 Ga0209257_1006958 3300025304 Bacteria 7051
98 Ga0209257_1014642 3300025304 Bacteria 3347
99 Ga0207654_10219875 3300025911 Bacteria 1259
100 Ga0207671_10005779 3300025914 Bacteria 11264
101 Ga0207671_10270202 3300025914 Bacteria 1339
102 Ga0207657_10003536 3300025919 Bacteria 16692
103 Ga0207681_10458248 3300025923 Bacteria 1038
104 Ga0207694_10315118 3300025924 Bacteria 1290
105 Ga0207687_10040364 3300025927 Bacteria 3199
106 Ga0207690_10000001 3300025932 Bacteria 807539
107 Ga0207690_10000002 3300025932 Bacteria 807473
108 Ga0207690_10000003 3300025932 Bacteria 783011
109 Ga0207690_10000004 3300025932 Bacteria 746138
110 Ga0207709_10011069 3300025935 Bacteria 4974
111 Ga0207711_10025952 3300025941 Bacteria 4914
112 Ga0207689_10064058 3300025942 Bacteria 3024
113 Ga0207651_10353372 3300025960 Bacteria 1238
114 Ga0207668_10003439 3300025972 Bacteria 9289
115 Ga0207668_10009657 3300025972 Bacteria 5793
116 Ga0207658_10000039 3300025986 Bacteria 143707
117 Ga0207677_10000110 3300026023 Bacteria 66525
118 Ga0207703_10008344 3300026035 Bacteria 8188
119 Ga0207639_10057713 3300026041 Bacteria 2982
120 Ga0207708_10069805 3300026075 Bacteria 2690
121 Ga0207708_10184883 3300026075 Bacteria 1655
122 Ga0207641_10000095 3300026088 Bacteria 124498
123 Ga0207641_10379584 3300026088 Bacteria 1353
124 Ga0207675_100000016 3300026118 Bacteria 126353
125 Ga0207675_100270872 3300026118 Bacteria 1648
126 Ga0207698_10055090 3300026142 Bacteria 3062
127 Ga0207698_10124488 3300026142 Bacteria 2189
128 Ga0207698_10590183 3300026142 Bacteria 1094
129 Ga0209813_10000093 3300027866 Bacteria 33306
130 Ga0207428_10001107 3300027907 Bacteria 29337
131 Ga0207428_10219705 3300027907 Bacteria 1425
132 Ga0268266_10000468 3300028379 Bacteria 58386
133 Ga0268266_10387440 3300028379 Bacteria 1319
134 Ga0307408_100354206 3300031548 Bacteria 1246
135 Ga0307413_10006568 3300031824 Bacteria 5326
136 Ga0307410_10026863 3300031852 Bacteria 3630
137 Ga0307410_10114704 3300031852 Bacteria 1955
138 Ga0307406_10162346 3300031901 Bacteria 1607
139 Ga0307412_10008552 3300031911 Bacteria 5849
140 Ga0307412_10078582 3300031911 Bacteria 2273
141 Ga0307409_100461265 3300031995 Bacteria 1228
142 Ga0307416_100101080 3300032002 Bacteria 2510
143 Ga0307414_10021191 3300032004 Bacteria 4071
144 Ga0395905_0442074 3300037471 Bacteria 1198
145 Ga0436365_1201209 3300039437 Bacteria 12682
146 Ga0436365_1597550 3300039437 Bacteria 2415
147 Ga0439461_0001174 3300041410 Bacteria 3997
148 Ga0439465_0000704 3300041413 Bacteria 10276
149 Ga0439431_0001099 3300041997 Bacteria 5863
150 Ga0439431_0021941 3300041997 Bacteria 1535
151 Ga0439442_003311 3300042002 Bacteria 3186
152 Ga0439445_0002155 3300042004 Bacteria 4359
153 Ga0439445_0007737 3300042004 Bacteria 2500
154 Ga0439432_001242 3300042006 Bacteria 9640
155 Ga0439462_0006748 3300042015 Bacteria 2864
156 Ga0439462_0008207 3300042015 Bacteria 2628
157 Ga0439434_0000502 3300042435 Bacteria 11152
158 Ga0439434_0013865 3300042435 Bacteria 2395
159 Ga0439460_0006453 3300042461 Bacteria 2911
160 Ga0451576_0001010 3300045051 Bacteria 52046
161 Ga0495638_0000011 3300046460 Bacteria 442453
162 Ga0495638_0000179 3300046460 Bacteria 97078
163 Ga0495650_0006458 3300046471 Bacteria 7297
164 Ga0495607_0030796 3300046501 Bacteria 3290
165 Ga0495583_0000305 3300046506 Bacteria 78306
166 Ga0495632_0000508 3300046519 Bacteria 36658
167 Ga0495648_0000023 3300046524 Bacteria 240174
168 Ga0495648_0070526 3300046524 Bacteria 2030
169 Ga0495621_0002321 3300046539 Bacteria 5104
170 Ga0495597_0054492 3300046542 Bacteria 1756
171 Ga0495625_0001991 3300046660 Bacteria 23062
172 Ga0495625_0055935 3300046660 Bacteria 2811
173 Ga0495647_0020110 3300046681 Bacteria 2395
174 Ga0495670_0000004 3300046691 Bacteria 310086
175 Ga0495670_0004404 3300046691 Bacteria 6910
176 Ga0495670_0060052 3300046691 Bacteria 1910
177 Ga0495671_0000012 3300046692 Bacteria 358632
178 Ga0495649_0124987 3300046694 Bacteria 1359
179 Ga0495673_0000029 3300047469 Bacteria 471019
180 Ga0495686_0000302 3300047472 Bacteria 84826
181 Ga0495686_0014392 3300047472 Bacteria 5447
182 Ga0496102_0349426 3300048905 Bacteria 1392
183 Ga0496115_0000504 3300048918 Bacteria 30605
184 Ga0496117_0025508 3300048920 Bacteria 4647
185 Ga0496121_0001018 3300048924 Bacteria 50054
186 Ga0496122_0002098 3300048925 Bacteria 29523
187 Ga0496123_0027529 3300048926 Bacteria 4231
188 Ga0496124_0001741 3300048927 Bacteria 30480
189 Ga0496124_0002622 3300048927 Bacteria 23156
190 Ga0496124_0073244 3300048927 Bacteria 2835
191 Ga0496125_0071451 3300048928 Bacteria 2711
192 Ga0496126_0079582 3300048929 Bacteria 2901
193 Ga0501033_0063575 3300049570 Bacteria 2716
194 Ga0501034_0136149 3300049571 Bacteria 2437
195 Ga0501039_0038819 3300049575 Bacteria 3677
196 Ga0501040_0058281 3300049576 Bacteria 2652
197 Ga0501040_0084283 3300049576 Bacteria 2205
198 Ga0501042_0079413 3300049578 Bacteria 2351
199 Ga0501048_0075713 3300049582 Bacteria 2375
200 Ga0501048_0090442 3300049582 Bacteria 2159
201 Ga0501069_0045741 3300049585 Bacteria 2425
202 Ga0501070_0136583 3300049586 Bacteria 2024
203 Ga0501071_0060380 3300049587 Bacteria 2744
204 Ga0501073_0005243 3300049589 Bacteria 9719
205 Ga0501076_0084592 3300049592 Bacteria 2548
206 Ga0501081_0087473 3300049743 Bacteria 2189
207 Ga0501241_006234 3300049758 Bacteria 2199
208 Ga0501035_0101636 3300049822 Bacteria 2523
209 Ga0501044_0390851 3300049823 Bacteria 1305
210 Ga0501045_0020476 3300049824 Bacteria 4725
211 nmdc:mga06z11_168_c1 3300050494 Bacteria 25790
212 nmdc:mga04h51_189_c1 3300050495 Bacteria 16836
213 nmdc:mga07m45_56329_c1 3300050496 Bacteria 2222
214 nmdc:mga05p37_96762_c1 3300050507 Bacteria 3637
215 nmdc:mga09592_72976_c1 3300050508 Bacteria 2915
216 nmdc:mga08y16_120545_c1 3300050511 Bacteria 2729
217 nmdc:mga08y16_214904_c1 3300050511 Bacteria 1991
218 nmdc:mga08y16_2223_c1 3300050511 Bacteria 19880
219 nmdc:mga08y16_27256_c1 3300050511 Bacteria 6020
220 Ga0500643_011951 3300053087 Bacteria 3133
221 Ga0500641_0000968 3300053096 Bacteria 10215
222 Ga0500641_0013353 3300053096 Bacteria 3017
223 Ga0500595_000878 3300053119 Bacteria 17136
224 Ga0500658_0000887 3300053134 Bacteria 12284
225 Ga0500658_0001304 3300053134 Bacteria 10096
226 Ga0500559_0008536 3300053136 Bacteria 4483
227 Ga0500559_0030844 3300053136 Bacteria 2299
228 Ga0500568_0003462 3300053139 Bacteria 8781
229 Ga0500568_0038070 3300053139 Bacteria 1948
230 Ga0500573_0000019 3300053140 Bacteria 173601
231 Ga0500604_0003888 3300053151 Bacteria 3992
232 Ga0500622_0042681 3300053156 Bacteria 2355
233 Ga0500645_028560 3300053730 Bacteria 1687
234 Ga0530510_0027508 3300061734 Bacteria 4074

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_0001010 Ga0451576_0001010_2300_3163 282
2 3300049576 Ga0501040_0058281 Ga0501040_0058281_201_1091 283
3 3300009177 Ga0105248_10058137 Ga0105248_100581372 286
4 3300013308 Ga0157375_10243248 Ga0157375_102432482 286
5 3300046681 Ga0495647_0020110 Ga0495647_0020110_837_1769 286
6 3300005354 Ga0070675_100108286 Ga0070675_1001082863 287
7 3300005438 Ga0070701_10014370 Ga0070701_100143702 287
8 3300005441 Ga0070700_100029620 Ga0070700_1000296202 287
9 3300005444 Ga0070694_100187777 Ga0070694_1001877772 287
10 3300006880 Ga0075429_100024670 Ga0075429_1000246707 287
11 3300009094 Ga0111539_10023855 Ga0111539_100238556 287
12 3300009094 Ga0111539_10242226 Ga0111539_102422262 287
13 3300009094 Ga0111539_10415619 Ga0111539_104156192 287
14 3300009147 Ga0114129_10030496 Ga0114129_100304964 287
15 3300013308 Ga0157375_10849220 Ga0157375_108492201 287
16 3300014326 Ga0157380_10023574 Ga0157380_100235743 287
17 3300014326 Ga0157380_10227749 Ga0157380_102277492 287
18 3300025923 Ga0207681_10458248 Ga0207681_104582481 287
19 3300026075 Ga0207708_10069805 Ga0207708_100698052 287
20 3300026075 Ga0207708_10184883 Ga0207708_101848832 287
21 3300026118 Ga0207675_100270872 Ga0207675_1002708721 287
22 3300026142 Ga0207698_10590183 Ga0207698_105901832 287
23 3300027907 Ga0207428_10001107 Ga0207428_1000110726 287
24 3300027907 Ga0207428_10219705 Ga0207428_102197052 287
25 3300031852 Ga0307410_10026863 Ga0307410_100268634 287
26 3300031995 Ga0307409_100461265 Ga0307409_1004612652 287
27 3300032002 Ga0307416_100101080 Ga0307416_1001010802 287
28 3300046539 Ga0495621_0002321 Ga0495621_0002321_1450_2343 287
29 3300049576 Ga0501040_0084283 Ga0501040_0084283_721_1611 287
30 3300049582 Ga0501048_0075713 Ga0501048_0075713_203_1093 287
31 3300049743 Ga0501081_0087473 Ga0501081_0087473_1171_2061 287
32 3300050507 nmdc:mga05p37_96762_c1 nmdc:mga05p37_96762_c1_1010_1903 287
33 3300050508 nmdc:mga09592_72976_c1 nmdc:mga09592_72976_c1_1689_2582 287
34 3300050511 nmdc:mga08y16_120545_c1 nmdc:mga08y16_120545_c1_1246_2142 287
35 3300050511 nmdc:mga08y16_214904_c1 nmdc:mga08y16_214904_c1_55_969 287
36 3300050511 nmdc:mga08y16_2223_c1 nmdc:mga08y16_2223_c1_3963_4853 287
37 3300050511 nmdc:mga08y16_27256_c1 nmdc:mga08y16_27256_c1_4910_5803 287
38 3300006844 Ga0075428_100045728 Ga0075428_1000457287 288
39 3300042461 Ga0439460_0006453 Ga0439460_0006453_364_1269 288
40 3300049575 Ga0501039_0038819 Ga0501039_0038819_1272_2177 288
41 3300049578 Ga0501042_0079413 Ga0501042_0079413_789_1694 288
42 3300049582 Ga0501048_0090442 Ga0501048_0090442_850_1755 288
43 3300049587 Ga0501071_0060380 Ga0501071_0060380_576_1481 288
44 3300049589 Ga0501073_0005243 Ga0501073_0005243_6906_7808 288
45 3300049592 Ga0501076_0084592 Ga0501076_0084592_1322_2227 288
46 3300049824 Ga0501045_0020476 Ga0501045_0020476_753_1658 288
47 3300061734 Ga0530510_0027508 Ga0530510_0027508_98_1003 288
48 3300047472 Ga0495686_0000302 Ga0495686_0000302_5468_6349 289
49 3300049570 Ga0501033_0063575 Ga0501033_0063575_756_1637 289
50 3300049822 Ga0501035_0101636 Ga0501035_0101636_962_1843 289
51 3300013306 Ga0163162_10128022 Ga0163162_101280223 291
52 3300048928 Ga0496125_0071451 Ga0496125_0071451_1448_2332 291
53 3300025972 Ga0207668_10009657 Ga0207668_100096574 292
54 3300005338 Ga0068868_100001536 Ga0068868_1000015368 296
55 3300005339 Ga0070660_100005075 Ga0070660_1000050756 296
56 3300005366 Ga0070659_100000001 Ga0070659_100000001486 296
57 3300009098 Ga0105245_10038693 Ga0105245_100386936 296
58 3300025919 Ga0207657_10003536 Ga0207657_1000353614 296
59 3300025927 Ga0207687_10040364 Ga0207687_100403642 296
60 3300025932 Ga0207690_10000001 Ga0207690_10000001100 296
61 3300025932 Ga0207690_10000002 Ga0207690_10000002100 296
62 3300025932 Ga0207690_10000003 Ga0207690_10000003100 296
63 3300025932 Ga0207690_10000004 Ga0207690_10000004100 296
64 3300025960 Ga0207651_10353372 Ga0207651_103533722 296
65 3300026023 Ga0207677_10000110 Ga0207677_1000011057 296
66 3300003775 Ga0055524_1000149 Ga0055524_100014980 297
67 3300003791 Ga0055530_10000060 Ga0055530_1000006035 297
68 3300003794 Ga0055531_10000049 Ga0055531_1000004957 297
69 3300003794 Ga0055531_10003830 Ga0055531_1000383010 297
70 3300021384 Ga0213876_10030983 Ga0213876_100309833 298
71 3300039437 Ga0436365_1597550 Ga0436365_1597550_1283_2209 298
72 iso_pu_bacteria 2946787523 2946788528 299
73 3300006871 Ga0075434_100101096 Ga0075434_1001010961 300
74 3300048920 Ga0496117_0025508 Ga0496117_0025508_3122_4060 301
75 3300005544 Ga0070686_100001036 Ga0070686_10000103615 302
76 3300005617 Ga0068859_100004807 Ga0068859_1000048073 302
77 3300006931 Ga0097620_100004807 Ga0097620_1000048073 302
78 3300009177 Ga0105248_10003049 Ga0105248_1000304915 302
79 3300014968 Ga0157379_10235963 Ga0157379_102359632 302
80 3300049758 Ga0501241_006234 Ga0501241_006234_158_1069 302
81 3300005335 Ga0070666_10009817 Ga0070666_100098172 303
82 3300005347 Ga0070668_100010932 Ga0070668_1000109321 303
83 3300005353 Ga0070669_100145995 Ga0070669_1001459951 303
84 3300005367 Ga0070667_100000062 Ga0070667_10000006293 303
85 3300005841 Ga0068863_100000054 Ga0068863_10000005480 303
86 3300025972 Ga0207668_10003439 Ga0207668_100034395 303
87 3300025986 Ga0207658_10000039 Ga0207658_1000003938 303
88 3300026088 Ga0207641_10000095 Ga0207641_1000009540 303
89 3300046471 Ga0495650_0006458 Ga0495650_0006458_5328_6257 303
90 3300046524 Ga0495648_0070526 Ga0495648_0070526_639_1553 303
91 3300049571 Ga0501034_0136149 Ga0501034_0136149_648_1601 303
92 3300049585 Ga0501069_0045741 Ga0501069_0045741_532_1485 303
93 3300049586 Ga0501070_0136583 Ga0501070_0136583_639_1592 303
94 3300049823 Ga0501044_0390851 Ga0501044_0390851_134_1087 303
95 3300053119 Ga0500595_000878 Ga0500595_000878_13773_14690 303
96 iso_pu_bacteria 2512564014 2512645655 303
97 iso_pu_bacteria 2885429604 2885431179 303
98 3300005329 Ga0070683_100060533 Ga0070683_1000605334 304
99 3300005334 Ga0068869_100112711 Ga0068869_1001127114 304
100 3300005547 Ga0070693_100185981 Ga0070693_1001859812 304
101 3300005548 Ga0070665_100000075 Ga0070665_10000007539 304
102 3300005616 Ga0068852_100081943 Ga0068852_1000819432 304
103 3300005841 Ga0068863_100038971 Ga0068863_1000389715 304
104 3300009093 Ga0105240_10299111 Ga0105240_102991113 304
105 3300009174 Ga0105241_10269112 Ga0105241_102691122 304
106 3300009551 Ga0105238_10187550 Ga0105238_101875502 304
107 3300013102 Ga0157371_10078506 Ga0157371_100785063 304
108 3300014325 Ga0163163_10321984 Ga0163163_103219842 304
109 3300020070 Ga0206356_11162962 Ga0206356_111629624 304
110 3300025911 Ga0207654_10219875 Ga0207654_102198752 304
111 3300025924 Ga0207694_10315118 Ga0207694_103151182 304
112 3300025942 Ga0207689_10064058 Ga0207689_100640582 304
113 3300026088 Ga0207641_10379584 Ga0207641_103795842 304
114 3300026142 Ga0207698_10055090 Ga0207698_100550902 304
115 3300026142 Ga0207698_10124488 Ga0207698_101244883 304
116 3300028379 Ga0268266_10000468 Ga0268266_1000046819 304
117 3300039437 Ga0436365_1201209 Ga0436365_1201209_9654_10601 304
118 3300046501 Ga0495607_0030796 Ga0495607_0030796_1626_2543 304
119 3300053136 Ga0500559_0008536 Ga0500559_0008536_2740_3687 304
120 3300053140 Ga0500573_0000019 Ga0500573_0000019_66707_67627 304
121 3300003322 rootL2_10023904 rootL2_100239044 305
122 3300025304 Ga0209257_1014642 Ga0209257_10146421 305
123 3300037471 Ga0395905_0442074 Ga0395905_0442074_37_960 305
124 3300046460 Ga0495638_0000011 Ga0495638_0000011_420212_421156 305
125 3300046506 Ga0495583_0000305 Ga0495583_0000305_72110_73054 305
126 3300046519 Ga0495632_0000508 Ga0495632_0000508_13941_14885 305
127 3300046524 Ga0495648_0000023 Ga0495648_0000023_217933_218877 305
128 3300046691 Ga0495670_0000004 Ga0495670_0000004_245683_246606 305
129 3300046692 Ga0495671_0000012 Ga0495671_0000012_14485_15429 305
130 3300046694 Ga0495649_0124987 Ga0495649_0124987_38_961 305
131 3300047469 Ga0495673_0000029 Ga0495673_0000029_343204_344148 305
132 iso_pu_bacteria 2928968154 2928969252 305
133 3300005262 Ga0065165_1002598 Ga0065165_10025986 306
134 3300005983 Ga0081540_1042588 Ga0081540_10425883 306
135 3300006042 Ga0075368_10000074 Ga0075368_100000747 306
136 3300006178 Ga0075367_10001673 Ga0075367_100016736 306
137 3300027866 Ga0209813_10000093 Ga0209813_1000009312 306
138 3300047472 Ga0495686_0014392 Ga0495686_0014392_4356_5282 306
139 3300048918 Ga0496115_0000504 Ga0496115_0000504_25106_26029 306
140 3300050494 nmdc:mga06z11_168_c1 nmdc:mga06z11_168_c1_13529_14467 306
141 3300050495 nmdc:mga04h51_189_c1 nmdc:mga04h51_189_c1_2385_3323 306
142 3300050496 nmdc:mga07m45_56329_c1 nmdc:mga07m45_56329_c1_656_1594 306
143 iso_pu_bacteria 2643221622 2644126660 306
144 3300002774 JGI25150J39212_1000319 JGI25150J39212_100031919 307
145 3300003781 Ga0055536_1029473 Ga0055536_10294732 307
146 3300003791 Ga0055530_10015799 Ga0055530_100157991 307
147 3300003791 Ga0055530_10025079 Ga0055530_100250793 307
148 3300003792 Ga0055540_1021030 Ga0055540_10210301 307
149 3300025245 Ga0207425_1000022 Ga0207425_1000022291 307
150 3300025258 Ga0209129_1000573 Ga0209129_100057318 307
151 3300025263 Ga0209565_1011051 Ga0209565_10110512 307
152 3300025292 Ga0209676_1017669 Ga0209676_10176691 307
153 3300025294 Ga0209025_1001210 Ga0209025_100121014 307
154 3300025297 Ga0209758_1000004 Ga0209758_1000004918 307
155 3300025298 Ga0209050_1000001 Ga0209050_10000012918 307
156 3300025303 Ga0209051_1000450 Ga0209051_100045023 307
157 3300025304 Ga0209257_1000872 Ga0209257_100087221 307
158 3300025304 Ga0209257_1000921 Ga0209257_100092122 307
159 3300025914 Ga0207671_10270202 Ga0207671_102702022 307
160 3300028379 Ga0268266_10387440 Ga0268266_103874402 307
161 3300048905 Ga0496102_0349426 Ga0496102_0349426_418_1347 307
162 iso_pu_bacteria 2879163058 2879166876 307
163 3300009545 Ga0105237_10052621 Ga0105237_100526216 308
164 3300025914 Ga0207671_10005779 Ga0207671_1000577914 308
165 3300031548 Ga0307408_100354206 Ga0307408_1003542062 308
166 3300031824 Ga0307413_10006568 Ga0307413_100065685 308
167 3300031852 Ga0307410_10114704 Ga0307410_101147043 308
168 3300031901 Ga0307406_10162346 Ga0307406_101623462 308
169 3300032004 Ga0307414_10021191 Ga0307414_100211915 308
170 3300046691 Ga0495670_0004404 Ga0495670_0004404_2904_3845 308
171 3300048925 Ga0496122_0002098 Ga0496122_0002098_3921_4877 308
172 3300048926 Ga0496123_0027529 Ga0496123_0027529_157_1143 308
173 3300048927 Ga0496124_0001741 Ga0496124_0001741_8781_9767 308
174 3300048927 Ga0496124_0073244 Ga0496124_0073244_1498_2484 308
175 3300048929 Ga0496126_0079582 Ga0496126_0079582_620_1576 308
176 3300053156 Ga0500622_0042681 Ga0500622_0042681_918_1874 308
177 3300053730 Ga0500645_028560 Ga0500645_028560_472_1407 308
178 iso_pu_bacteria 2599185359 2600226289 308
179 iso_pu_bacteria 2818991466 2819712666 308
180 iso_pu_bacteria 2928526807 2928527265 308
181 3300003214 JGI25165J46597_1000032 JGI25165J46597_100003267 309
182 3300005539 Ga0068853_100182662 Ga0068853_1001826622 309
183 3300005719 Ga0068861_100000968 Ga0068861_10000096815 309
184 3300009148 Ga0105243_10114330 Ga0105243_101143302 309
185 3300013297 Ga0157378_10131154 Ga0157378_101311544 309
186 3300025261 Ga0209233_1000066 Ga0209233_100006669 309
187 3300025272 Ga0209455_1011770 Ga0209455_10117702 309
188 3300025935 Ga0207709_10011069 Ga0207709_100110692 309
189 3300025941 Ga0207711_10025952 Ga0207711_100259523 309
190 3300026035 Ga0207703_10008344 Ga0207703_100083443 309
191 3300026041 Ga0207639_10057713 Ga0207639_100577133 309
192 3300026118 Ga0207675_100000016 Ga0207675_10000001694 309
193 3300031911 Ga0307412_10008552 Ga0307412_100085523 309
194 3300031911 Ga0307412_10078582 Ga0307412_100785824 309
195 3300046460 Ga0495638_0000179 Ga0495638_0000179_79610_80578 309
196 3300046542 Ga0495597_0054492 Ga0495597_0054492_50_1018 309
197 3300046660 Ga0495625_0001991 Ga0495625_0001991_12604_13572 309
198 3300046660 Ga0495625_0055935 Ga0495625_0055935_420_1388 309
199 3300046691 Ga0495670_0060052 Ga0495670_0060052_87_1055 309
200 3300048924 Ga0496121_0001018 Ga0496121_0001018_40359_41300 309
201 3300048927 Ga0496124_0002622 Ga0496124_0002622_10054_11043 309
202 3300053096 Ga0500641_0013353 Ga0500641_0013353_831_1799 309
203 3300053134 Ga0500658_0001304 Ga0500658_0001304_4073_5041 309
204 3300053136 Ga0500559_0030844 Ga0500559_0030844_1313_2269 309
205 3300053139 Ga0500568_0038070 Ga0500568_0038070_532_1500 309
206 3300000041 ARcpr5oldR_c001965 ARcpr5oldR_0019652 310
207 3300000043 ARcpr5yngRDRAFT_c001341 ARcpr5yngRDRAFT_0013414 310
208 3300003215 JGI25153J46596_10020474 JGI25153J46596_100204742 310
209 3300003771 Ga0055526_1037561 Ga0055526_10375612 310
210 3300003773 Ga0055537_1000317 Ga0055537_100031722 310
211 3300003773 Ga0055537_1001489 Ga0055537_10014897 310
212 3300003791 Ga0055530_10008098 Ga0055530_100080984 310
213 3300025208 Ga0209436_108765 Ga0209436_1087652 310
214 3300025245 Ga0207425_1010309 Ga0207425_10103093 310
215 3300025263 Ga0209565_1000010 Ga0209565_1000010246 310
216 3300025263 Ga0209565_1000099 Ga0209565_100009991 310
217 3300025273 Ga0209673_1001990 Ga0209673_100199016 310
218 3300025273 Ga0209673_1007924 Ga0209673_10079242 310
219 3300025295 Ga0209564_1008563 Ga0209564_10085635 310
220 3300025297 Ga0209758_1019716 Ga0209758_10197163 310
221 3300025297 Ga0209758_1027954 Ga0209758_10279543 310
222 3300025298 Ga0209050_1000010 Ga0209050_1000010544 310
223 3300025298 Ga0209050_1006928 Ga0209050_10069285 310
224 3300025299 Ga0209256_1000034 Ga0209256_1000034102 310
225 3300025304 Ga0209257_1000009 Ga0209257_1000009572 310
226 3300025304 Ga0209257_1006958 Ga0209257_10069584 310
227 3300041410 Ga0439461_0001174 Ga0439461_0001174_1073_2011 310
228 3300041413 Ga0439465_0000704 Ga0439465_0000704_8213_9151 310
229 3300041997 Ga0439431_0001099 Ga0439431_0001099_1816_2754 310
230 3300041997 Ga0439431_0021941 Ga0439431_0021941_244_1176 310
231 3300042002 Ga0439442_003311 Ga0439442_003311_186_1124 310
232 3300042004 Ga0439445_0002155 Ga0439445_0002155_498_1436 310
233 3300042004 Ga0439445_0007737 Ga0439445_0007737_178_1110 310
234 3300042006 Ga0439432_001242 Ga0439432_001242_3331_4269 310
235 3300042015 Ga0439462_0006748 Ga0439462_0006748_1681_2619 310
236 3300042015 Ga0439462_0008207 Ga0439462_0008207_1520_2452 310
237 3300042435 Ga0439434_0000502 Ga0439434_0000502_6713_7651 310
238 3300042435 Ga0439434_0013865 Ga0439434_0013865_186_1118 310
239 3300053087 Ga0500643_011951 Ga0500643_011951_377_1309 310
240 3300053096 Ga0500641_0000968 Ga0500641_0000968_5151_6089 310
241 3300053134 Ga0500658_0000887 Ga0500658_0000887_4409_5341 310
242 3300053139 Ga0500568_0003462 Ga0500568_0003462_1923_2855 310
243 3300053151 Ga0500604_0003888 Ga0500604_0003888_2695_3627 310

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22740

PapZ_C

RapZ C-terminal domain

190

310

0.98

PF03668

RapZ-like_N

RapZ-like N-terminal domain

25

186

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
5o5s-assembly1.cif.gz_A-2 x-ray crystal structure of the rapz c-terminal domain from escherichia coli 0.9594 171 292
5o5s-assembly1.cif.gz_A-2 x-ray crystal structure of the rapz c-terminal domain from escherichia coli 0.9444 171 292
4w5h-assembly1.cif.gz_A new structural conformations of adenylate kinase from streptococcus pneumoniae d39 0.6551 6 163
7e9v-assembly1.cif.gz_A the crystal structure of human ump-cmp kinase from biortus. 0.6499 4 167
3adk-assembly1.cif.gz_A refined structure of porcine cytosolic adenylate kinase at 2.1 angstroms resolution 0.6375 2 165
ID Description Score Start End Superfamily
af_Q2G039_182_303_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9779 178 289 3.40.50.720
af_Q2G039_182_303_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8919 178 289 3.40.50.720
af_Q59022_231_434_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6712 4 34 3.40.50.300
af_P9WFQ3_17_301_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6707 7 291 3.40.50.300
af_P9WFQ3_17_301_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6633 7 291 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A520HSN3-F1-model_v4 RNase adaptor protein RapZ 0.9968 172 294 GO:0005524
AF-A0A662DSW2-F1-model_v4 RNase adaptor protein RapZ 0.9792 171 292 GO:0005524
AF-A0A174LCA3-F1-model_v4 GlmZ(SRNA)-inactivating NTPase 0.976 171 293 GO:0005524
AF-A0A520HSN3-F1-model_v4 RNase adaptor protein RapZ 0.9731 172 294 GO:0005524
AF-A0A3D1AI04-F1-model_v4 RapZ C-terminal domain-containing protein 0.9686 169 292 GO:0005524

Feature Viewer

pLDDT pTM Quality
82.32 0.53 Medium
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Predicted Structure (AlphaFold2)

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