F355408

General Info

Members Datasets Scaffolds Average Seq Length
243 196 223 215

Family's Representative Sequence

Representative Sequence 3300005535|Ga0070684_100301930|Ga0070684_1003019302
Length 253
Sequence MVHGKSRIAALRTVHSVSADSRVARLKYLDEFLHVPDSKLSVMVVGATGLVGRECVRLLLADPAFNRIVVVTRRPLSPEVRSPKLETHVVDFEHLNEYDELFRVDAILCAIGTTIRQAGSRTRFRTVDYEYPFAFAKLGRRAGCGHYLVVSALGANPRSRVFYNRVKGELEDALRGLGYPRLTIVRPSLLLGPRAELRLGEEVAKRVTRWLGPLVPRAFKPVEARAVAMTLVRAARESGSGVRVIESGEIALA

Samples

Sample ID Description Type Environment
1 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
2 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
3 2608642108 Pantoea agglomerans NFPP29 Isolate Rhizoplane
4 2721755523 Delftia sp. HK171 Isolate Unclassified
5 2818991457 Xanthomonas translucens 569 Isolate Unclassified
6 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
7 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
8 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
9 2881609920 Pantoea sp. ARC607 Isolate Rhizosphere
10 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
11 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
12 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
13 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
14 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
15 2978975091 Pantoea anthophila SORGH_AS 797 Isolate Unclassified
16 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
17 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
18 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
19 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
20 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
21 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
22 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
23 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
24 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
25 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
26 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
27 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
28 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
29 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
30 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
47 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
48 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
49 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
60 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
61 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
62 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
64 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
65 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
92 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
97 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
98 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
99 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
100 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
101 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
102 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
105 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
106 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
107 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
108 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
109 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
110 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
113 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
114 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
115 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
122 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
123 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
124 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
125 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
126 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
133 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
134 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
135 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
136 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
137 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
138 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
139 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
140 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
141 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
144 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
145 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
146 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
147 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
148 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
149 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
150 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
151 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
152 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
153 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
154 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
155 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
156 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
157 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
158 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
159 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
160 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
161 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
162 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
163 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
164 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
165 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
166 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
167 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
168 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
169 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
170 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
171 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
172 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
173 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
174 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
175 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
176 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
177 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
178 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
179 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
180 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
181 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
182 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
183 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
184 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
185 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
186 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
189 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
190 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
191 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
192 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
193 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
194 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
195 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
196 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.77
Metatranscriptomes 0
Isolates 8.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.7
Nodule 0.82
Rhizoplane 2.06
Rhizosphere 79.01
Stem 0
Stem Tuber 0
Unclassified 14.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1001384 3300002705 Bacteria 10377
2 Ga0055540_1010109 3300003792 Bacteria 3171
3 Ga0055531_10000192 3300003794 Bacteria 67874
4 Ga0058692_1000054 3300003856 Bacteria 106871
5 Ga0058692_1000692 3300003856 Bacteria 13875
6 Ga0065704_10079303 3300005289 Bacteria 4199
7 Ga0070683_100062764 3300005329 Bacteria 3455
8 Ga0070670_100000573 3300005331 Bacteria 29071
9 Ga0070670_100034698 3300005331 Bacteria 4341
10 Ga0070680_100267854 3300005336 Bacteria 1446
11 Ga0070661_100364296 3300005344 Bacteria 1136
12 Ga0070669_100555995 3300005353 Bacteria 957
13 Ga0070675_100156712 3300005354 Bacteria 1955
14 Ga0070709_10003061 3300005434 Bacteria 8981
15 Ga0070709_10126634 3300005434 Unclassified 1738
16 Ga0070714_100005613 3300005435 Bacteria 9592
17 Ga0070714_100006433 3300005435 Bacteria 9072
18 Ga0070714_100159570 3300005435 Bacteria 2039
19 Ga0070713_100000015 3300005436 Bacteria 121525
20 Ga0070713_100503636 3300005436 Unclassified 1143
21 Ga0070710_10453980 3300005437 Unclassified 869
22 Ga0070681_10009106 3300005458 Bacteria 9756
23 Ga0070679_100132091 3300005530 Bacteria 2477
24 Ga0070684_100301930 3300005535 Bacteria 1469
25 Ga0070686_100487488 3300005544 Bacteria 954
26 Ga0070693_100003456 3300005547 Bacteria 7368
27 Ga0070665_100063172 3300005548 Bacteria 3713
28 Ga0070665_100428147 3300005548 Bacteria 1332
29 Ga0070664_100092910 3300005564 Bacteria 2613
30 Ga0070664_100393679 3300005564 Bacteria 1266
31 Ga0068852_100166554 3300005616 Bacteria 2062
32 Ga0068852_100384516 3300005616 Bacteria 1377
33 Ga0068861_100278629 3300005719 Bacteria 1439
34 Ga0070717_10001519 3300006028 Bacteria 16074
35 Ga0075365_10021653 3300006038 Bacteria 4014
36 Ga0075364_10082318 3300006051 Bacteria 2130
37 Ga0070712_100001970 3300006175 Bacteria 12570
38 Ga0075428_100011040 3300006844 Bacteria 10047
39 Ga0075431_100209091 3300006847 Bacteria 1994
40 Ga0079104_1000096 3300006946 Bacteria 129793
41 Ga0105251_10000077 3300009011 Bacteria 93505
42 Ga0105251_10003697 3300009011 Bacteria 10970
43 Ga0105244_10044221 3300009036 Bacteria 2295
44 Ga0105244_10276204 3300009036 Bacteria 780
45 Ga0105250_10021054 3300009092 Bacteria 2633
46 Ga0114129_10196287 3300009147 Bacteria 2736
47 Ga0105243_10002941 3300009148 Bacteria 14088
48 Ga0105242_10015461 3300009176 Bacteria 5926
49 Ga0157373_10010001 3300013100 Bacteria 6989
50 Ga0157373_10092866 3300013100 Bacteria 2125
51 Ga0157371_10000026 3300013102 Bacteria 274703
52 Ga0157371_10085434 3300013102 Bacteria 2235
53 Ga0157369_10010153 3300013105 Bacteria 10746
54 Ga0157369_10342398 3300013105 Bacteria 1553
55 Ga0157372_10010535 3300013307 Bacteria 9836
56 Ga0157372_10012276 3300013307 Bacteria 9125
57 Ga0182008_10000805 3300014497 Bacteria 21964
58 Ga0182008_10035801 3300014497 Bacteria 2484
59 Ga0157376_10365217 3300014969 Unclassified 1386
60 Ga0182006_1000129 3300015261 Bacteria 81237
61 Ga0182006_1068155 3300015261 Bacteria 1326
62 Ga0182007_10000035 3300015262 Bacteria 132553
63 Ga0182005_1000001 3300015265 Bacteria 1014869
64 Ga0182005_1011678 3300015265 Bacteria 2498
65 Ga0209674_100157 3300025226 Bacteria 91077
66 Ga0209437_100100 3300025233 Bacteria 228479
67 Ga0209759_1014456 3300025256 Bacteria 2087
68 Ga0209564_1006706 3300025295 Bacteria 6120
69 Ga0209051_1000281 3300025303 Bacteria 83196
70 Ga0209257_1000039 3300025304 Bacteria 591694
71 Ga0207655_1003153 3300025728 Bacteria 12459
72 Ga0207713_1000007 3300025735 Bacteria 564979
73 Ga0207713_1001066 3300025735 Bacteria 23679
74 Ga0207692_10356392 3300025898 Unclassified 903
75 Ga0207699_10007107 3300025906 Bacteria 5458
76 Ga0207643_10069666 3300025908 Bacteria 2022
77 Ga0207707_10009724 3300025912 Bacteria 8341
78 Ga0207693_10003961 3300025915 Bacteria 12583
79 Ga0207660_10187113 3300025917 Bacteria 1611
80 Ga0207649_10317684 3300025920 Bacteria 1143
81 Ga0207652_10239522 3300025921 Bacteria 1635
82 Ga0207650_10008848 3300025925 Bacteria 6879
83 Ga0207659_10638704 3300025926 Bacteria 909
84 Ga0207700_10000955 3300025928 Bacteria 16651
85 Ga0207700_10032178 3300025928 Unclassified 3737
86 Ga0207664_10006092 3300025929 Bacteria 8258
87 Ga0207664_10054847 3300025929 Unclassified 3160
88 Ga0207686_10017534 3300025934 Bacteria 4037
89 Ga0207709_10005048 3300025935 Bacteria 7539
90 Ga0207661_10308803 3300025944 Bacteria 1419
91 Ga0207679_10494258 3300025945 Bacteria 1091
92 Ga0207651_10209584 3300025960 Unclassified 1568
93 Ga0207668_10049517 3300025972 Bacteria 2889
94 Ga0207640_10158285 3300025981 Bacteria 1672
95 Ga0207675_100240835 3300026118 Bacteria 1748
96 Ga0207698_10169733 3300026142 Bacteria 1919
97 Ga0209281_1000020 3300027111 Bacteria 575972
98 Ga0209371_1000116 3300027312 Bacteria 135524
99 Ga0209371_1000430 3300027312 Bacteria 42665
100 Ga0268266_10312807 3300028379 Bacteria 1468
101 Ga0268266_10506349 3300028379 Bacteria 1153
102 Ga0265323_10018047 3300028653 Bacteria 2735
103 Ga0307515_10043990 3300028794 Bacteria 6920
104 Ga0268256_1000099 3300030500 Bacteria 135508
105 Ga0268256_1000565 3300030500 Bacteria 29945
106 Ga0265332_10018898 3300031238 Bacteria 3042
107 Ga0265316_10330945 3300031344 Unclassified 1105
108 Ga0316575_10013736 3300031665 Bacteria 3029
109 Ga0316579_10004947 3300031691 Bacteria 5338
110 Ga0316576_10008622 3300031727 Bacteria 6520
111 Ga0316578_10182304 3300031728 Bacteria 1265
112 Ga0307411_11142295 3300032005 Bacteria 704
113 Ga0316583_10021890 3300032133 Bacteria 2291
114 Ga0316583_10029191 3300032133 Bacteria 1966
115 Ga0307510_10016490 3300033180 Bacteria 8720
116 Ga0373923_0006603 3300035111 Bacteria 4021
117 Ga0373954_0132137 3300035118 Bacteria 1215
118 Ga0373956_0004059 3300035119 Archaea 5875
119 Ga0373924_0002734 3300035410 Bacteria 5959
120 Ga0373933_0062457 3300035724 Unclassified 2249
121 Ga0373937_0208094 3300036401 Bacteria 1840
122 Ga0316582_0123803 3300036647 Bacteria 1732
123 Ga0316584_0247141 3300036712 Bacteria 1304
124 Ga0373925_0309829 3300037068 Bacteria 1276
125 Ga0395899_0065919 3300037312 Bacteria 2660
126 Ga0395900_0230768 3300037418 Bacteria 1861
127 Ga0395900_0346539 3300037418 Bacteria 1460
128 Ga0395898_0398348 3300037466 Bacteria 1312
129 Ga0395898_0926953 3300037466 Bacteria 809
130 Ga0395901_0131797 3300038443 Bacteria 2626
131 Ga0237819_01277 3300038705 Bacteria 6862
132 Ga0436361_1165758 3300039447 Bacteria 1082
133 Ga0439438_002059 3300041405 Bacteria 8736
134 Ga0439447_001314 3300041407 Bacteria 9043
135 Ga0439453_0012121 3300041408 Bacteria 1448
136 Ga0451806_549173 3300041462 Bacteria 1829
137 Ga0439446_0114076 3300042156 Bacteria 864
138 Ga0439464_0135065 3300042439 Bacteria 765
139 Ga0451577_0025290 3300042876 Bacteria 5389
140 Ga0451577_0051342 3300042876 Bacteria 3681
141 Ga0451577_0537740 3300042876 Bacteria 1061
142 Ga0453683_0006446 3300044673 Bacteria 8056
143 Ga0453683_0113755 3300044673 Unclassified 1702
144 Ga0453684_0045407 3300044712 Bacteria 5862
145 Ga0453684_0189262 3300044712 Bacteria 2409
146 Ga0453684_0477788 3300044712 Bacteria 1383
147 Ga0466957_0267469 3300044842 Bacteria 1141
148 Ga0451576_0003770 3300045051 Bacteria 20439
149 Ga0451576_0864998 3300045051 Unclassified 949
150 Ga0495592_0009571 3300046454 Bacteria 7291
151 Ga0495603_0044085 3300046455 Bacteria 2662
152 Ga0495590_0033501 3300046457 Bacteria 1796
153 Ga0495651_0001212 3300046462 Bacteria 19915
154 Ga0495653_0004017 3300046463 Bacteria 11879
155 Ga0495650_0000019 3300046471 Bacteria 533849
156 Ga0495664_0099391 3300046477 Unclassified 1752
157 Ga0495585_0000019 3300046492 Bacteria 156966
158 Ga0495606_0002215 3300046507 Bacteria 23228
159 Ga0495608_0009331 3300046511 Bacteria 6861
160 Ga0495628_0022609 3300046516 Bacteria 5164
161 Ga0495630_0007946 3300046517 Bacteria 7612
162 Ga0495631_0000918 3300046518 Bacteria 18343
163 Ga0495642_0057466 3300046528 Bacteria 1609
164 Ga0495652_0040242 3300046529 Unclassified 4039
165 Ga0495587_0000916 3300046536 Bacteria 19493
166 Ga0495645_0006621 3300046543 Bacteria 8047
167 Ga0495622_0037739 3300046557 Bacteria 2250
168 Ga0495633_0001734 3300046558 Bacteria 16299
169 Ga0495667_0007275 3300046559 Bacteria 7511
170 Ga0495656_0018610 3300046615 Bacteria 2671
171 Ga0495634_0192674 3300046642 Unclassified 1270
172 Ga0495625_0155293 3300046660 Bacteria 1536
173 Ga0495635_0009806 3300046663 Bacteria 6695
174 Ga0495661_0049527 3300046665 Bacteria 2547
175 Ga0495599_0025779 3300046678 Unclassified 3682
176 Ga0495623_0027224 3300046679 Unclassified 3676
177 Ga0495646_0006933 3300046680 Bacteria 7192
178 Ga0495613_0028026 3300046689 Unclassified 4192
179 Ga0495670_0011940 3300046691 Bacteria 4274
180 Ga0495649_0026884 3300046694 Bacteria 3195
181 Ga0495600_0000477 3300046809 Bacteria 20779
182 Ga0495581_0183697 3300047315 Unclassified 1223
183 Ga0495604_0012334 3300047317 Bacteria 6794
184 Ga0495680_0011424 3300047322 Bacteria 7861
185 Ga0495675_0005219 3300047444 Bacteria 7906
186 Ga0495685_023967 3300047447 Bacteria 2101
187 Ga0495686_0230543 3300047472 Bacteria 1049
188 Ga0495602_0015550 3300048088 Bacteria 7673
189 Ga0495615_0026594 3300048090 Bacteria 1352
190 Ga0495615_0062000 3300048090 Bacteria 989
191 Ga0496102_0006193 3300048905 Bacteria 10195
192 Ga0496109_0921590 3300048912 Bacteria 812
193 Ga0496116_0005565 3300048919 Bacteria 11621
194 Ga0496117_0000001 3300048920 Bacteria 2526244
195 Ga0496117_0000340 3300048920 Bacteria 82594
196 Ga0496117_0004338 3300048920 Bacteria 15750
197 Ga0496118_0000002 3300048921 Bacteria 1690764
198 Ga0496118_0000046 3300048921 Bacteria 271783
199 Ga0496118_0017562 3300048921 Bacteria 6504
200 Ga0496118_0356261 3300048921 Bacteria 777
201 Ga0496119_0000484 3300048922 Bacteria 54485
202 Ga0496120_0000162 3300048923 Bacteria 112200
203 Ga0496121_0004620 3300048924 Bacteria 18331
204 Ga0496121_0040228 3300048924 Bacteria 4104
205 Ga0496121_0073655 3300048924 Bacteria 2736
206 Ga0496122_0000049 3300048925 Bacteria 268493
207 Ga0496122_0000600 3300048925 Bacteria 74156
208 Ga0496122_0000898 3300048925 Bacteria 55008
209 Ga0496123_0000042 3300048926 Bacteria 254481
210 Ga0496123_0001043 3300048926 Bacteria 41949
211 Ga0496123_0025291 3300048926 Bacteria 4481
212 Ga0496124_0000905 3300048927 Bacteria 47960
213 Ga0496124_0017892 3300048927 Bacteria 6660
214 Ga0496125_0060818 3300048928 Bacteria 3033
215 Ga0496126_0012081 3300048929 Bacteria 8871
216 Ga0495682_0148264 3300049460 Bacteria 837
217 Ga0501031_0050546 3300049568 Bacteria 2708
218 Ga0501034_0575706 3300049571 Bacteria 1033
219 Ga0501080_0061182 3300049742 Bacteria 3506
220 Ga0501081_0226977 3300049743 Bacteria 1359
221 nmdc:mga05p37_995488_c1 3300050507 Bacteria 891
222 Ga0495601_0029426 3300053077 Bacteria 3407
223 Ga0495612_0004616 3300053078 Archaea 5706

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048912 Ga0496109_0921590 Ga0496109_0921590_26_598 185
2 3300005616 Ga0068852_100384516 Ga0068852_1003845162 195
3 3300005336 Ga0070680_100267854 Ga0070680_1002678541 197
4 3300005458 Ga0070681_10009106 Ga0070681_100091066 197
5 3300005547 Ga0070693_100003456 Ga0070693_1000034567 197
6 3300013105 Ga0157369_10342398 Ga0157369_103423982 197
7 iso_pu_bacteria 2608642108 2608670676 199
8 iso_pu_bacteria 2881609920 2881611290 199
9 iso_pu_bacteria 2978975091 2978976956 199
10 3300006844 Ga0075428_100011040 Ga0075428_1000110403 201
11 3300006847 Ga0075431_100209091 Ga0075431_1002090911 201
12 3300013307 Ga0157372_10012276 Ga0157372_100122764 201
13 3300025960 Ga0207651_10209584 Ga0207651_102095843 201
14 3300027312 Ga0209371_1000430 Ga0209371_100043019 201
15 3300030500 Ga0268256_1000565 Ga0268256_100056519 201
16 3300041405 Ga0439438_002059 Ga0439438_002059_2222_2851 201
17 3300041407 Ga0439447_001314 Ga0439447_001314_7422_8051 201
18 iso_pu_bacteria 2600255292 2601668908 201
19 iso_pu_bacteria 2857547612 2857551620 201
20 iso_pu_bacteria 2885080285 2885086022 201
21 iso_pu_bacteria 2932410948 2932416528 201
22 iso_pu_bacteria 2932416698 2932417072 201
23 3300015262 Ga0182007_10000035 Ga0182007_1000003531 202
24 3300015265 Ga0182005_1000001 Ga0182005_1000001212 202
25 3300025981 Ga0207640_10158285 Ga0207640_101582852 202
26 iso_pu_bacteria 2721755523 2722883575 202
27 iso_pu_bacteria 2818991457 2819662160 202
28 iso_pu_bacteria 2839138175 2839141328 202
29 iso_pu_bacteria 2919130084 2919132797 202
30 iso_pu_bacteria 2929195423 2929199568 202
31 iso_pu_bacteria 8021622325 8021622711 202
32 iso_pu_bacteria 8021626552 8021628808 202
33 iso_pu_bacteria 8021648035 8021651484 202
34 3300003856 Ga0058692_1000692 Ga0058692_100069212 203
35 3300006038 Ga0075365_10021653 Ga0075365_100216534 203
36 3300009011 Ga0105251_10003697 Ga0105251_1000369714 203
37 3300009036 Ga0105244_10276204 Ga0105244_102762042 203
38 3300009092 Ga0105250_10021054 Ga0105250_100210542 203
39 3300013102 Ga0157371_10085434 Ga0157371_100854342 203
40 3300013105 Ga0157369_10010153 Ga0157369_100101538 203
41 3300013307 Ga0157372_10010535 Ga0157372_100105356 203
42 3300025233 Ga0209437_100100 Ga0209437_100100203 203
43 3300025728 Ga0207655_1003153 Ga0207655_10031533 203
44 3300025735 Ga0207713_1000007 Ga0207713_1000007304 203
45 3300048905 Ga0496102_0006193 Ga0496102_0006193_8847_9482 203
46 3300048919 Ga0496116_0005565 Ga0496116_0005565_7193_7828 203
47 3300048920 Ga0496117_0000340 Ga0496117_0000340_72447_73082 203
48 3300048921 Ga0496118_0000046 Ga0496118_0000046_9513_10148 203
49 3300048921 Ga0496118_0356261 Ga0496118_0356261_82_717 203
50 3300048925 Ga0496122_0000600 Ga0496122_0000600_9513_10148 203
51 3300048926 Ga0496123_0001043 Ga0496123_0001043_31802_32437 203
52 3300048927 Ga0496124_0017892 Ga0496124_0017892_1101_1736 203
53 iso_pu_bacteria 2852684882 2852688139 203
54 3300005530 Ga0070679_100132091 Ga0070679_1001320912 205
55 3300005564 Ga0070664_100393679 Ga0070664_1003936792 205
56 3300009036 Ga0105244_10044221 Ga0105244_100442211 205
57 3300013100 Ga0157373_10010001 Ga0157373_100100016 205
58 3300013102 Ga0157371_10000026 Ga0157371_10000026192 205
59 3300014497 Ga0182008_10035801 Ga0182008_100358012 205
60 3300015261 Ga0182006_1000129 Ga0182006_100012936 205
61 3300025912 Ga0207707_10009724 Ga0207707_100097242 205
62 3300025921 Ga0207652_10239522 Ga0207652_102395222 205
63 3300025945 Ga0207679_10494258 Ga0207679_104942581 205
64 3300046557 Ga0495622_0037739 Ga0495622_0037739_1430_2059 205
65 3300046558 Ga0495633_0001734 Ga0495633_0001734_8595_9224 205
66 3300048920 Ga0496117_0000001 Ga0496117_0000001_46493_47122 205
67 3300048921 Ga0496118_0000002 Ga0496118_0000002_46493_47122 205
68 3300048924 Ga0496121_0004620 Ga0496121_0004620_3256_3885 205
69 3300048924 Ga0496121_0040228 Ga0496121_0040228_978_1607 205
70 3300048925 Ga0496122_0000898 Ga0496122_0000898_41975_42604 205
71 3300048926 Ga0496123_0025291 Ga0496123_0025291_395_1024 205
72 3300005289 Ga0065704_10079303 Ga0065704_100793034 206
73 3300005331 Ga0070670_100000573 Ga0070670_1000005733 206
74 3300005353 Ga0070669_100555995 Ga0070669_1005559951 206
75 3300005548 Ga0070665_100063172 Ga0070665_1000631722 206
76 3300006946 Ga0079104_1000096 Ga0079104_1000096100 206
77 3300009011 Ga0105251_10000077 Ga0105251_1000007733 206
78 3300015261 Ga0182006_1068155 Ga0182006_10681552 206
79 3300025735 Ga0207713_1001066 Ga0207713_10010667 206
80 3300025925 Ga0207650_10008848 Ga0207650_100088482 206
81 3300027111 Ga0209281_1000020 Ga0209281_100002027 206
82 3300028379 Ga0268266_10506349 Ga0268266_105063492 206
83 3300041462 Ga0451806_549173 Ga0451806_549173_1134_1766 206
84 3300046660 Ga0495625_0155293 Ga0495625_0155293_712_1344 206
85 3300048920 Ga0496117_0004338 Ga0496117_0004338_6847_7479 206
86 3300048922 Ga0496119_0000484 Ga0496119_0000484_13524_14156 206
87 3300048923 Ga0496120_0000162 Ga0496120_0000162_70442_71074 206
88 3300048925 Ga0496122_0000049 Ga0496122_0000049_81649_82281 206
89 3300048926 Ga0496123_0000042 Ga0496123_0000042_172179_172811 206
90 3300048927 Ga0496124_0000905 Ga0496124_0000905_33921_34553 206
91 3300003856 Ga0058692_1000054 Ga0058692_100005411 207
92 3300009148 Ga0105243_10002941 Ga0105243_1000294110 207
93 3300009176 Ga0105242_10015461 Ga0105242_100154616 207
94 3300015265 Ga0182005_1011678 Ga0182005_10116782 207
95 3300025908 Ga0207643_10069666 Ga0207643_100696662 207
96 3300025934 Ga0207686_10017534 Ga0207686_100175342 207
97 3300025935 Ga0207709_10005048 Ga0207709_100050484 207
98 3300027312 Ga0209371_1000116 Ga0209371_100011685 207
99 3300030500 Ga0268256_1000099 Ga0268256_100009939 207
100 3300044673 Ga0453683_0113755 Ga0453683_0113755_394_1029 207
101 3300045051 Ga0451576_0864998 Ga0451576_0864998_284_919 207
102 3300046665 Ga0495661_0049527 Ga0495661_0049527_1277_1912 207
103 3300046694 Ga0495649_0026884 Ga0495649_0026884_1654_2289 207
104 3300048921 Ga0496118_0017562 Ga0496118_0017562_3976_4611 207
105 3300048929 Ga0496126_0012081 Ga0496126_0012081_6358_6993 207
106 3300038705 Ga0237819_01277 Ga0237819_01277_4073_4711 208
107 3300005329 Ga0070683_100062764 Ga0070683_1000627642 209
108 3300005344 Ga0070661_100364296 Ga0070661_1003642961 209
109 3300005354 Ga0070675_100156712 Ga0070675_1001567122 209
110 3300005434 Ga0070709_10126634 Ga0070709_101266342 209
111 3300005435 Ga0070714_100159570 Ga0070714_1001595701 209
112 3300005437 Ga0070710_10453980 Ga0070710_104539801 209
113 3300005564 Ga0070664_100092910 Ga0070664_1000929102 209
114 3300014969 Ga0157376_10365217 Ga0157376_103652172 209
115 3300025898 Ga0207692_10356392 Ga0207692_103563922 209
116 3300025920 Ga0207649_10317684 Ga0207649_103176842 209
117 3300025944 Ga0207661_10308803 Ga0207661_103088032 209
118 3300032005 Ga0307411_11142295 Ga0307411_111422951 209
119 3300005544 Ga0070686_100487488 Ga0070686_1004874882 210
120 3300025917 Ga0207660_10187113 Ga0207660_101871132 210
121 3300031665 Ga0316575_10013736 Ga0316575_100137363 210
122 3300031691 Ga0316579_10004947 Ga0316579_100049473 210
123 3300031728 Ga0316578_10182304 Ga0316578_101823042 210
124 3300032133 Ga0316583_10021890 Ga0316583_100218903 210
125 3300032133 Ga0316583_10029191 Ga0316583_100291912 210
126 3300036647 Ga0316582_0123803 Ga0316582_0123803_245_883 210
127 3300036712 Ga0316584_0247141 Ga0316584_0247141_10_648 210
128 3300039447 Ga0436361_1165758 Ga0436361_1165758_267_899 210
129 3300042876 Ga0451577_0051342 Ga0451577_0051342_2812_3456 210
130 3300044712 Ga0453684_0189262 Ga0453684_0189262_293_937 210
131 3300045051 Ga0451576_0003770 Ga0451576_0003770_19601_20245 210
132 3300025972 Ga0207668_10049517 Ga0207668_100495173 211
133 3300046455 Ga0495603_0044085 Ga0495603_0044085_1052_1705 211
134 3300005616 Ga0068852_100166554 Ga0068852_1001665542 212
135 3300025926 Ga0207659_10638704 Ga0207659_106387041 212
136 3300026142 Ga0207698_10169733 Ga0207698_101697332 212
137 3300031238 Ga0265332_10018898 Ga0265332_100188984 212
138 3300035111 Ga0373923_0006603 Ga0373923_0006603_2867_3523 212
139 3300035118 Ga0373954_0132137 Ga0373954_0132137_390_1046 212
140 3300035119 Ga0373956_0004059 Ga0373956_0004059_765_1421 212
141 3300035410 Ga0373924_0002734 Ga0373924_0002734_4706_5362 212
142 3300035724 Ga0373933_0062457 Ga0373933_0062457_818_1474 212
143 3300036401 Ga0373937_0208094 Ga0373937_0208094_1068_1718 212
144 3300037068 Ga0373925_0309829 Ga0373925_0309829_401_1057 212
145 3300042876 Ga0451577_0537740 Ga0451577_0537740_319_981 212
146 3300044673 Ga0453683_0006446 Ga0453683_0006446_584_1246 212
147 3300046454 Ga0495592_0009571 Ga0495592_0009571_2030_2686 212
148 3300046462 Ga0495651_0001212 Ga0495651_0001212_6599_7255 212
149 3300046463 Ga0495653_0004017 Ga0495653_0004017_6266_6922 212
150 3300046477 Ga0495664_0099391 Ga0495664_0099391_1032_1688 212
151 3300046511 Ga0495608_0009331 Ga0495608_0009331_6096_6752 212
152 3300046516 Ga0495628_0022609 Ga0495628_0022609_117_773 212
153 3300046517 Ga0495630_0007946 Ga0495630_0007946_5924_6580 212
154 3300046529 Ga0495652_0040242 Ga0495652_0040242_571_1227 212
155 3300046536 Ga0495587_0000916 Ga0495587_0000916_8685_9341 212
156 3300046543 Ga0495645_0006621 Ga0495645_0006621_6359_7015 212
157 3300046559 Ga0495667_0007275 Ga0495667_0007275_4676_5332 212
158 3300046642 Ga0495634_0192674 Ga0495634_0192674_80_736 212
159 3300046663 Ga0495635_0009806 Ga0495635_0009806_1009_1665 212
160 3300046678 Ga0495599_0025779 Ga0495599_0025779_2247_2903 212
161 3300046679 Ga0495623_0027224 Ga0495623_0027224_2497_3153 212
162 3300046680 Ga0495646_0006933 Ga0495646_0006933_2798_3454 212
163 3300046689 Ga0495613_0028026 Ga0495613_0028026_2172_2828 212
164 3300046809 Ga0495600_0000477 Ga0495600_0000477_19377_20033 212
165 3300047315 Ga0495581_0183697 Ga0495581_0183697_34_690 212
166 3300047317 Ga0495604_0012334 Ga0495604_0012334_1669_2325 212
167 3300047322 Ga0495680_0011424 Ga0495680_0011424_5082_5738 212
168 3300047444 Ga0495675_0005219 Ga0495675_0005219_5282_5938 212
169 3300048088 Ga0495602_0015550 Ga0495602_0015550_2191_2847 212
170 3300053077 Ga0495601_0029426 Ga0495601_0029426_2385_3041 212
171 3300053078 Ga0495612_0004616 Ga0495612_0004616_2190_2846 212
172 3300005434 Ga0070709_10003061 Ga0070709_100030612 213
173 3300005435 Ga0070714_100005613 Ga0070714_1000056132 213
174 3300005435 Ga0070714_100006433 Ga0070714_1000064337 213
175 3300005436 Ga0070713_100000015 Ga0070713_10000001548 213
176 3300005436 Ga0070713_100503636 Ga0070713_1005036361 213
177 3300006028 Ga0070717_10001519 Ga0070717_1000151912 213
178 3300006175 Ga0070712_100001970 Ga0070712_10000197011 213
179 3300025906 Ga0207699_10007107 Ga0207699_100071074 213
180 3300025915 Ga0207693_10003961 Ga0207693_100039612 213
181 3300025928 Ga0207700_10000955 Ga0207700_1000095511 213
182 3300025928 Ga0207700_10032178 Ga0207700_100321784 213
183 3300025929 Ga0207664_10006092 Ga0207664_100060922 213
184 3300025929 Ga0207664_10054847 Ga0207664_100548472 213
185 3300044842 Ga0466957_0267469 Ga0466957_0267469_407_1105 213
186 3300046471 Ga0495650_0000019 Ga0495650_0000019_472338_472979 213
187 3300046507 Ga0495606_0002215 Ga0495606_0002215_9575_10216 213
188 3300049571 Ga0501034_0575706 Ga0501034_0575706_67_720 213
189 3300013100 Ga0157373_10092866 Ga0157373_100928662 214
190 3300049742 Ga0501080_0061182 Ga0501080_0061182_2421_3083 214
191 3300049743 Ga0501081_0226977 Ga0501081_0226977_611_1273 214
192 3300031727 Ga0316576_10008622 Ga0316576_100086222 215
193 3300005719 Ga0068861_100278629 Ga0068861_1002786292 216
194 3300026118 Ga0207675_100240835 Ga0207675_1002408352 216
195 3300041408 Ga0439453_0012121 Ga0439453_0012121_152_802 216
196 3300042156 Ga0439446_0114076 Ga0439446_0114076_70_720 216
197 3300042439 Ga0439464_0135065 Ga0439464_0135065_76_726 216
198 3300014497 Ga0182008_10000805 Ga0182008_1000080522 217
199 3300046528 Ga0495642_0057466 Ga0495642_0057466_737_1390 217
200 3300046615 Ga0495656_0018610 Ga0495656_0018610_1010_1663 217
201 3300047447 Ga0495685_023967 Ga0495685_023967_1246_1899 217
202 3300048090 Ga0495615_0062000 Ga0495615_0062000_126_779 217
203 3300048928 Ga0496125_0060818 Ga0496125_0060818_2017_2682 217
204 3300005548 Ga0070665_100428147 Ga0070665_1004281472 218
205 3300028379 Ga0268266_10312807 Ga0268266_103128072 218
206 3300028653 Ga0265323_10018047 Ga0265323_100180472 219
207 3300028794 Ga0307515_10043990 Ga0307515_100439909 219
208 3300031344 Ga0265316_10330945 Ga0265316_103309452 219
209 3300033180 Ga0307510_10016490 Ga0307510_100164902 219
210 3300049460 Ga0495682_0148264 Ga0495682_0148264_37_696 219
211 3300050507 nmdc:mga05p37_995488_c1 nmdc:mga05p37_995488_c1_199_870 219
212 3300003792 Ga0055540_1010109 Ga0055540_10101093 221
213 3300003794 Ga0055531_10000192 Ga0055531_1000019264 221
214 3300025303 Ga0209051_1000281 Ga0209051_100028188 221
215 3300025304 Ga0209257_1000039 Ga0209257_100003994 221
216 3300037312 Ga0395899_0065919 Ga0395899_0065919_1873_2538 221
217 3300037418 Ga0395900_0230768 Ga0395900_0230768_1074_1739 221
218 3300037466 Ga0395898_0398348 Ga0395898_0398348_525_1190 221
219 3300038443 Ga0395901_0131797 Ga0395901_0131797_1839_2504 221
220 3300047472 Ga0495686_0230543 Ga0495686_0230543_328_1011 221
221 3300048090 Ga0495615_0026594 Ga0495615_0026594_435_1112 221
222 3300042876 Ga0451577_0025290 Ga0451577_0025290_1867_2538 222
223 3300044712 Ga0453684_0045407 Ga0453684_0045407_602_1273 222
224 3300046492 Ga0495585_0000019 Ga0495585_0000019_52566_53234 222
225 3300046518 Ga0495631_0000918 Ga0495631_0000918_4071_4739 222
226 3300046691 Ga0495670_0011940 Ga0495670_0011940_1258_1926 222
227 3300025256 Ga0209759_1014456 Ga0209759_10144562 223
228 3300046457 Ga0495590_0033501 Ga0495590_0033501_950_1621 223
229 3300005331 Ga0070670_100034698 Ga0070670_1000346984 224
230 3300006051 Ga0075364_10082318 Ga0075364_100823183 224
231 3300009147 Ga0114129_10196287 Ga0114129_101962874 225
232 3300044712 Ga0453684_0477788 Ga0453684_0477788_128_814 225
233 3300005535 Ga0070684_100301930 Ga0070684_1003019302 226
234 3300037418 Ga0395900_0346539 Ga0395900_0346539_269_973 230
235 3300037466 Ga0395898_0926953 Ga0395898_0926953_33_737 230
236 3300049568 Ga0501031_0050546 Ga0501031_0050546_1794_2495 232
237 3300048924 Ga0496121_0073655 Ga0496121_0073655_239_952 234
238 iso_pu_bacteria 2510917015 2511105162 240
239 iso_pu_bacteria 8020945358 8020951731 240
240 iso_pu_bacteria 2510917015 2511102308 242
241 3300025295 Ga0209564_1006706 Ga0209564_10067065 244
242 3300002705 JGI25156J39149_1001384 JGI25156J39149_10013844 246
243 3300025226 Ga0209674_100157 Ga0209674_1001573 246

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

42

216

0.86

PF01118

Semialdhyde_dh

Semialdehyde dehydrogenase, NAD binding domain

41

121

0.77

PF13460

NAD_binding_10

NAD(P)H-binding

46

218

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fmu-assembly1.cif.gz_A crystal structure of a tat-interacting protein homologue (htatip2, aw111545, cc3, tip30) from mus musculus at 2.30 a resolution 0.874 22 231
2a35-assembly1.cif.gz_A 1.5 a crystal structure of a protein of unknown function pa4017 from pseudomonas aeruginosa pao1, possible epimerase 0.8188 23 233
2bka-assembly1.cif.gz_A-2 cc3(tip30)crystal structure 0.8113 22 233
2a35-assembly1.cif.gz_B 1.5 a crystal structure of a protein of unknown function pa4017 from pseudomonas aeruginosa pao1, possible epimerase 0.8087 23 233
2a35-assembly1.cif.gz_A 1.5 a crystal structure of a protein of unknown function pa4017 from pseudomonas aeruginosa pao1, possible epimerase 0.789 23 233
ID Description Score Start End Superfamily
af_A0A1D6IP12_4_87_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9028 24 55 3.40.50.20
af_K7K156_39_177_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9017 24 55 3.40.50.720
af_P45469_1_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8792 23 233 3.40.50.720
2fmuA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.874 22 231 3.40.50.720
af_P45469_1_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8595 23 233 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7Y4J7C2-F1-model_v4 deleted 0.9932 36 166
AF-A0A290HXV3-F1-model_v4 Uncharacterized protein 0.9928 22 234
AF-A0A257GUJ0-F1-model_v4 Nucleoside-diphosphate sugar epimerase 0.9847 23 148
AF-A0A290HXV3-F1-model_v4 Uncharacterized protein 0.9836 22 234
AF-A0A076PVZ8-F1-model_v4 Nucleoside-diphosphate sugar epimerase 0.9819 27 233 GO:0016020

Feature Viewer

pLDDT pTM Quality
82.11 0.79 High
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Predicted Structure (AlphaFold2)

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