F355014
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 242 | 194 | 484 | 428 |
Family's Representative Sequence
| Representative Sequence | 3300048911|Ga0496108_0027972|Ga0496108_0027972_1622_3052 |
| Length | 476 |
| Sequence | MTDQLTGEVTADGALASGPAAGDVPEEVDTSLLDTTLPGTPIEPASQTGVDAGLNAVALDRIRADFPILERTVRQGKPLVYLDSGATSQRPVPVIDAEQEYVTGHNAAVHRGAHQLAEEATDFYESARERIAAFVGVANSDEIIFVKNATEGINLVAYSLGNATYSDDPAAARFKIGPGDEIVVTEMEHHANLIPWQELCRRTGATLRWFKVTDDFRLDLTEINTLINSSTKVVAFTHQSNVLGTINPVEVLVAAAQRVGALTVLDACQSVPHQPVDFTALGIDFAAFSGHKMLGPSGVGVLYGRYELLAAMPPFLTGGSMIEQVFIDHATYAAPPARFEAGVPMTSQAVGLGAAVDYLQTTGMKVVADHEASLTGYALQQLSAIPGVRIIGPSTTVDRGGAVSFVVDGVHAHDVGQILDDAGVQVRVGHHCAWPLHRRFGIAATVRASFALYNTPAEVDALVGAVRDAQRFFGVG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 2 | 3300002073 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 | Metagenome | Rhizosphere |
| 3 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 17 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 18 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 19 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 20 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 21 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 22 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 23 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 24 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 25 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 26 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 27 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 28 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 29 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300020075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 40 | 3300020077 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 41 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 42 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 43 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 44 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 45 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 46 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 75 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 76 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 77 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 78 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 79 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 80 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 81 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 82 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 83 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 84 | 3300031889 | Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO | Metagenome | Rhizosphere |
| 85 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 86 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 87 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 88 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 89 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 90 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 91 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 92 | 3300036457 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA5 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 93 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 94 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 95 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 96 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 97 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 98 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 99 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 100 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 101 | 3300041451 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG | Metagenome | Rhizoplane |
| 102 | 3300041453 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG | Metagenome | Rhizoplane |
| 103 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 104 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 105 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 106 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 107 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 108 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 109 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 110 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 111 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 112 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 113 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 114 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 115 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 123 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 124 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 125 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 126 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 127 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 128 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 129 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 130 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 131 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 132 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 133 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 134 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 135 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 136 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 137 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 138 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 139 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 140 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 141 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 142 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 145 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 147 | 2523231044 | Gordonia rhizosphera NBRC 16068 | Isolate | Rhizosphere |
| 148 | 2547132424 | Nocardia nova SH22a | Isolate | Unclassified |
| 149 | 2551306166 | Nocardia tenerifensis NBRC 101015 | Isolate | Rhizosphere |
| 150 | 2558860112 | Pseudonocardia acaciae DSM 45401 | Isolate | Unclassified |
| 151 | 2558860280 | Kutzneria sp. 744 | Isolate | Unclassified |
| 152 | 2582580736 | Prauserella sp. Am3 | Isolate | Unclassified |
| 153 | 2585427649 | Amycolatopsis japonica MG417-CF17, DSM 44213 | Isolate | Unclassified |
| 154 | 2643221679 | Angustibacter sp. Root456 | Isolate | Unclassified |
| 155 | 2675903058 | Actinopolymorpha cephalotaxi CPCC 202808 | Isolate | Rhizosphere |
| 156 | 2738541308 | Rhodococcus sp. OK551 | Isolate | Unclassified |
| 157 | 2751185725 | Microbispora sp. NRRL B-24597 | Isolate | Unclassified |
| 158 | 2751185734 | Saccharothrix sp. NRRL B-16314 | Isolate | Rhizosphere |
| 159 | 2751185792 | Kitasatospora arboriphila NRRL B-24581 | Isolate | Unclassified |
| 160 | 2775506925 | Saccharopolyspora phatthalungensis NRRL B-24798 | Isolate | Rhizosphere |
| 161 | 2795385470 | Labedaea rhizosphaerae DSM 45361 | Isolate | Rhizosphere |
| 162 | 2795385472 | Herbihabitans rhizosphaerae DSM 101727 | Isolate | Rhizosphere |
| 163 | 2808606522 | Amycolatopsis sp. BJA-103 | Isolate | Unclassified |
| 164 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 165 | 2827628540 | Actinopolymorpha cephalotaxi DSM 45117 | Isolate | Rhizosphere |
| 166 | 2842888712 | Tsukamurella sp. R-71941 | Isolate | Unclassified |
| 167 | 2863067949 | Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) | Isolate | Rhizosphere |
| 168 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 169 | 2866612099 | Amycolatopsis suaedae 8-3EHSu | Isolate | Unclassified |
| 170 | 2870721527 | Saccharothrix ecbatanensis DSM 45486 | Isolate | Rhizosphere |
| 171 | 2891326441 | Actinokineospora pegani TRM65233 | Isolate | Unclassified |
| 172 | 2899359706 | Amycolatopsis anabasis EGI 650086 | Isolate | Unclassified |
| 173 | 2899370129 | Amycolatopsis alkalitolerans SYSUP0005 | Isolate | Stem Tuber |
| 174 | 2904765812 | Rhodococcus fascians 1590 | Isolate | Rhizosphere |
| 175 | 2904770941 | Rhodococcus fascians 1339 | Isolate | Rhizosphere |
| 176 | 2908811453 | Rhodococcus sp. 1R11 | Isolate | Unclassified |
| 177 | 2915358134 | Pseudonocardia pini CAP47R | Isolate | Unclassified |
| 178 | 2915768154 | Amycolatopsis pittospori PIP199 | Isolate | Unclassified |
| 179 | 2917736166 | Amycolatopsis dendrobii DR6-1 | Isolate | Unclassified |
| 180 | 2919420072 | Rhodococcus fascians 3241 | Isolate | Rhizosphere |
| 181 | 2919432681 | Rhodococcus sp. 3258 | Isolate | Rhizosphere |
| 182 | 2919446982 | Phycicoccus sp. 3266 | Isolate | Rhizosphere |
| 183 | 2919713450 | Nocardia kruczakiae 4272 | Isolate | Rhizosphere |
| 184 | 2932398195 | Dietzia sp. 2505 | Isolate | Rhizosphere |
| 185 | 2974315732 | Rhodococcus sp. SORGH_AS 301 | Isolate | Unclassified |
| 186 | 2984523437 | Rhodococcus sp. SORGH_AS303 | Isolate | Aerial Root |
| 187 | 3001889506 | Janibacter sp. YIM B02568 | Isolate | Unclassified |
| 188 | 3002998708 | Actinomadura barringtoniae GKU 128 | Isolate | Unclassified |
| 189 | 8003314358 | Amycolatopsis sp. MtRt-6 | Isolate | Unclassified |
| 190 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
| 191 | 8053945823 | Actinomadura terrae OS3-83 | Isolate | Rhizosphere |
| 192 | 8054472261 | Pseudonocardia terrae RS11V-5 | Isolate | Rhizosphere |
| 193 | 8056060235 | Nocardiopsis endophytica RSe5-2 | Isolate | Unclassified |
| 194 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 77.69 |
| Metatranscriptomes | 2.07 |
| Isolates | 20.25 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.41 |
| Bulb | 0 |
| Endosphere | 0.41 |
| Nodule | 0 |
| Rhizoplane | 9.09 |
| Rhizosphere | 69.83 |
| Stem | 0 |
| Stem Tuber | 0.41 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0496108_0027972 | 3300048911 | Bacteria | 4663 |
| 2 | JGI24745J21846_1000678 | 3300002073 | Bacteria | 3076 |
| 3 | Ga0070660_100078228 | 3300005339 | Bacteria | 2593 |
| 4 | Ga0070668_100009293 | 3300005347 | Bacteria | 7291 |
| 5 | Ga0070668_100051232 | 3300005347 | Bacteria | 3180 |
| 6 | Ga0070668_100199558 | 3300005347 | Bacteria | 1642 |
| 7 | Ga0070671_100000431 | 3300005355 | Bacteria | 29129 |
| 8 | Ga0070667_100307587 | 3300005367 | Bacteria | 1428 |
| 9 | Ga0070714_100013131 | 3300005435 | Bacteria | 6632 |
| 10 | Ga0070714_100132919 | 3300005435 | Bacteria | 2225 |
| 11 | Ga0070700_100049625 | 3300005441 | Bacteria | 2606 |
| 12 | Ga0070663_100010788 | 3300005455 | Bacteria | 5704 |
| 13 | Ga0070663_100041300 | 3300005455 | Bacteria | 3234 |
| 14 | Ga0070678_100057193 | 3300005456 | Bacteria | 2856 |
| 15 | Ga0070681_10029166 | 3300005458 | Bacteria | 5539 |
| 16 | Ga0070685_10094070 | 3300005466 | Bacteria | 1819 |
| 17 | Ga0070679_100068333 | 3300005530 | Bacteria | 3545 |
| 18 | Ga0070696_100052843 | 3300005546 | Bacteria | 2827 |
| 19 | Ga0070665_100008865 | 3300005548 | Bacteria | 10185 |
| 20 | Ga0070665_100176205 | 3300005548 | Bacteria | 2139 |
| 21 | Ga0068856_100324735 | 3300005614 | Bacteria | 1556 |
| 22 | Ga0068856_100370606 | 3300005614 | Bacteria | 1451 |
| 23 | Ga0068852_100086370 | 3300005616 | Bacteria | 2796 |
| 24 | Ga0068852_100328875 | 3300005616 | Bacteria | 1486 |
| 25 | Ga0068866_10121842 | 3300005718 | Bacteria | 1471 |
| 26 | Ga0068861_100226337 | 3300005719 | Bacteria | 1584 |
| 27 | Ga0068863_100024821 | 3300005841 | Bacteria | 5717 |
| 28 | Ga0068863_100042549 | 3300005841 | Bacteria | 4316 |
| 29 | Ga0068858_100000021 | 3300005842 | Bacteria | 172933 |
| 30 | Ga0068858_100180070 | 3300005842 | Bacteria | 1995 |
| 31 | Ga0068860_100021633 | 3300005843 | Bacteria | 6227 |
| 32 | Ga0068862_100106207 | 3300005844 | Bacteria | 2461 |
| 33 | Ga0081455_10000297 | 3300005937 | Bacteria | 65930 |
| 34 | Ga0075370_10010674 | 3300006353 | Bacteria | 4812 |
| 35 | Ga0075431_100015970 | 3300006847 | Bacteria | 7618 |
| 36 | Ga0075434_100021010 | 3300006871 | Bacteria | 6341 |
| 37 | Ga0075435_100199153 | 3300007076 | Bacteria | 1697 |
| 38 | Ga0105240_10332172 | 3300009093 | Bacteria | 1729 |
| 39 | Ga0111539_10095261 | 3300009094 | Bacteria | 3497 |
| 40 | Ga0105243_10026448 | 3300009148 | Bacteria | 4441 |
| 41 | Ga0105248_10000239 | 3300009177 | Bacteria | 63565 |
| 42 | Ga0105248_10243017 | 3300009177 | Bacteria | 2026 |
| 43 | Ga0105237_10177160 | 3300009545 | Bacteria | 2132 |
| 44 | Ga0105238_10066288 | 3300009551 | Bacteria | 3612 |
| 45 | Ga0105238_10091019 | 3300009551 | Bacteria | 3038 |
| 46 | Ga0157374_10118679 | 3300013296 | Bacteria | 2551 |
| 47 | Ga0163163_10079261 | 3300014325 | Bacteria | 3282 |
| 48 | Ga0157379_10000005 | 3300014968 | Bacteria | 172948 |
| 49 | Ga0157379_10005809 | 3300014968 | Bacteria | 10613 |
| 50 | Ga0163161_10029059 | 3300017792 | Bacteria | 3929 |
| 51 | Ga0163161_10095599 | 3300017792 | Bacteria | 2204 |
| 52 | Ga0206349_1843421 | 3300020075 | Bacteria | 3269 |
| 53 | Ga0206351_10748984 | 3300020077 | Bacteria | 5050 |
| 54 | Ga0206350_10828911 | 3300020080 | Bacteria | 3425 |
| 55 | Ga0213873_10000148 | 3300021358 | Bacteria | 13326 |
| 56 | Ga0213876_10013261 | 3300021384 | Bacteria | 4380 |
| 57 | Ga0213875_10000073 | 3300021388 | Bacteria | 119027 |
| 58 | Ga0224712_10000539 | 3300022467 | Bacteria | 7675 |
| 59 | Ga0207688_10036477 | 3300025901 | Bacteria | 2724 |
| 60 | Ga0207643_10017190 | 3300025908 | Bacteria | 3951 |
| 61 | Ga0207705_10159301 | 3300025909 | Bacteria | 1695 |
| 62 | Ga0207707_10103837 | 3300025912 | Bacteria | 2484 |
| 63 | Ga0207671_10072423 | 3300025914 | Bacteria | 2572 |
| 64 | Ga0207662_10012615 | 3300025918 | Bacteria | 4709 |
| 65 | Ga0207657_10042380 | 3300025919 | Bacteria | 4016 |
| 66 | Ga0207657_10119875 | 3300025919 | Bacteria | 2165 |
| 67 | Ga0207694_10121280 | 3300025924 | Bacteria | 2088 |
| 68 | Ga0207700_10042105 | 3300025928 | Bacteria | 3346 |
| 69 | Ga0207664_10008529 | 3300025929 | Bacteria | 7157 |
| 70 | Ga0207644_10008602 | 3300025931 | Bacteria | 6675 |
| 71 | Ga0207706_10082192 | 3300025933 | Bacteria | 2831 |
| 72 | Ga0207670_10177478 | 3300025936 | Bacteria | 1602 |
| 73 | Ga0207711_10000321 | 3300025941 | Bacteria | 51456 |
| 74 | Ga0207689_10212682 | 3300025942 | Bacteria | 1598 |
| 75 | Ga0207668_10056105 | 3300025972 | Bacteria | 2742 |
| 76 | Ga0207640_10071665 | 3300025981 | Bacteria | 2335 |
| 77 | Ga0207658_10109657 | 3300025986 | Bacteria | 2180 |
| 78 | Ga0207677_10015012 | 3300026023 | Bacteria | 4541 |
| 79 | Ga0207703_10000001 | 3300026035 | Bacteria | 822925 |
| 80 | Ga0207703_10049358 | 3300026035 | Bacteria | 3402 |
| 81 | Ga0207703_10193104 | 3300026035 | Bacteria | 1805 |
| 82 | Ga0207678_10021468 | 3300026067 | Bacteria | 5661 |
| 83 | Ga0207708_10006256 | 3300026075 | Bacteria | 8822 |
| 84 | Ga0207641_10003337 | 3300026088 | Bacteria | 14271 |
| 85 | Ga0207641_10232891 | 3300026088 | Bacteria | 1713 |
| 86 | Ga0207648_10104405 | 3300026089 | Bacteria | 2485 |
| 87 | Ga0207675_100068865 | 3300026118 | Bacteria | 3307 |
| 88 | Ga0207683_10081548 | 3300026121 | Bacteria | 2871 |
| 89 | Ga0207683_10133113 | 3300026121 | Bacteria | 2237 |
| 90 | Ga0268266_10073473 | 3300028379 | Bacteria | 2967 |
| 91 | Ga0268266_10122795 | 3300028379 | Bacteria | 2313 |
| 92 | Ga0268264_10025283 | 3300028381 | Bacteria | 4851 |
| 93 | Ga0307515_10054539 | 3300028794 | Bacteria | 5866 |
| 94 | Ga0307511_10001996 | 3300030521 | Bacteria | 21427 |
| 95 | Ga0265327_10000081 | 3300031251 | Bacteria | 205988 |
| 96 | Ga0265327_10001957 | 3300031251 | Bacteria | 23594 |
| 97 | Ga0265327_10027896 | 3300031251 | Bacteria | 3241 |
| 98 | Ga0307513_10007498 | 3300031456 | Bacteria | 14127 |
| 99 | Ga0307513_10036817 | 3300031456 | Bacteria | 5452 |
| 100 | Ga0316575_10015389 | 3300031665 | Bacteria | 2881 |
| 101 | Ga0316579_10006756 | 3300031691 | Bacteria | 4697 |
| 102 | Ga0316576_10006118 | 3300031727 | Bacteria | 7451 |
| 103 | Ga0307413_10147470 | 3300031824 | Bacteria | 1635 |
| 104 | Ga0307518_10001710 | 3300031838 | Bacteria | 16204 |
| 105 | Ga0307410_10035107 | 3300031852 | Bacteria | 3254 |
| 106 | Ga0326468_10001567 | 3300031889 | Bacteria | 1967 |
| 107 | Ga0307409_100265181 | 3300031995 | Bacteria | 1579 |
| 108 | Ga0316583_10004031 | 3300032133 | Bacteria | 5220 |
| 109 | Ga0316580_10011090 | 3300032139 | Bacteria | 2730 |
| 110 | Ga0307507_10009186 | 3300033179 | Bacteria | 13276 |
| 111 | Ga0307507_10027754 | 3300033179 | Bacteria | 6055 |
| 112 | Ga0373956_0009115 | 3300035119 | Bacteria | 4024 |
| 113 | Ga0373960_0012651 | 3300035121 | Bacteria | 2101 |
| 114 | Ga0316574_0027456 | 3300035398 | Bacteria | 3429 |
| 115 | Ga0265778_000054 | 3300036457 | Bacteria | 6917 |
| 116 | Ga0316582_0011643 | 3300036647 | Bacteria | 4871 |
| 117 | Ga0316584_0030703 | 3300036712 | Bacteria | 3969 |
| 118 | Ga0373925_0050494 | 3300037068 | Bacteria | 3102 |
| 119 | Ga0395899_0048784 | 3300037312 | Bacteria | 3149 |
| 120 | Ga0316581_0000320 | 3300037588 | Bacteria | 8613 |
| 121 | Ga0436364_0238329 | 3300037853 | Bacteria | 3182 |
| 122 | Ga0436364_0290389 | 3300037853 | Bacteria | 159315 |
| 123 | Ga0436365_0140900 | 3300039437 | Bacteria | 10401 |
| 124 | Ga0436365_0443017 | 3300039437 | Bacteria | 4511 |
| 125 | Ga0436362_0388883 | 3300039453 | Bacteria | 29572 |
| 126 | Ga0451791_0214161 | 3300041451 | Bacteria | 4172 |
| 127 | Ga0451797_0391647 | 3300041453 | Bacteria | 1811 |
| 128 | Ga0466972_0002073 | 3300044658 | Bacteria | 9810 |
| 129 | Ga0466965_0012173 | 3300044683 | Bacteria | 4043 |
| 130 | Ga0466966_0023626 | 3300044684 | Bacteria | 4024 |
| 131 | Ga0466966_0024196 | 3300044684 | Bacteria | 3974 |
| 132 | Ga0466963_0000103 | 3300044694 | Bacteria | 30319 |
| 133 | Ga0466963_0080291 | 3300044694 | Bacteria | 2208 |
| 134 | Ga0466963_0268049 | 3300044694 | Bacteria | 1200 |
| 135 | Ga0466971_0008402 | 3300044719 | Bacteria | 4503 |
| 136 | Ga0466968_0002097 | 3300044735 | Bacteria | 7259 |
| 137 | Ga0466970_0008906 | 3300044765 | Bacteria | 5060 |
| 138 | Ga0466957_0002744 | 3300044842 | Bacteria | 9526 |
| 139 | Ga0466957_0034566 | 3300044842 | Bacteria | 3032 |
| 140 | Ga0466960_0000616 | 3300044901 | Bacteria | 12281 |
| 141 | Ga0466960_0104199 | 3300044901 | Bacteria | 1465 |
| 142 | Ga0466959_0036915 | 3300045049 | Bacteria | 3610 |
| 143 | Ga0466959_0064504 | 3300045049 | Bacteria | 2659 |
| 144 | Ga0466959_0177763 | 3300045049 | Bacteria | 1490 |
| 145 | Ga0466958_0000096 | 3300045836 | Bacteria | 27471 |
| 146 | Ga0466958_0035030 | 3300045836 | Bacteria | 2998 |
| 147 | Ga0466958_0037472 | 3300045836 | Bacteria | 2906 |
| 148 | Ga0466967_0001005 | 3300045976 | Bacteria | 15405 |
| 149 | Ga0466967_0001459 | 3300045976 | Bacteria | 13743 |
| 150 | Ga0466967_0028577 | 3300045976 | Bacteria | 4657 |
| 151 | Ga0466967_0046387 | 3300045976 | Bacteria | 3783 |
| 152 | Ga0466967_0070477 | 3300045976 | Bacteria | 3127 |
| 153 | Ga0466967_0242678 | 3300045976 | Bacteria | 1719 |
| 154 | Ga0495603_0032947 | 3300046455 | Bacteria | 3118 |
| 155 | Ga0495650_0074627 | 3300046471 | Bacteria | 1322 |
| 156 | Ga0495580_0136648 | 3300046472 | Bacteria | 1700 |
| 157 | Ga0495662_0092490 | 3300046476 | Bacteria | 1475 |
| 158 | Ga0495608_0072367 | 3300046511 | Bacteria | 2249 |
| 159 | Ga0495665_0033660 | 3300046531 | Bacteria | 2741 |
| 160 | Ga0495656_0028069 | 3300046615 | Bacteria | 2255 |
| 161 | Ga0496100_0008042 | 3300048903 | Bacteria | 5861 |
| 162 | Ga0496100_0064136 | 3300048903 | Bacteria | 2430 |
| 163 | Ga0496101_0011744 | 3300048904 | Bacteria | 5823 |
| 164 | Ga0496102_0000046 | 3300048905 | Bacteria | 184899 |
| 165 | Ga0496103_0000392 | 3300048906 | Bacteria | 38854 |
| 166 | Ga0496104_0016450 | 3300048907 | Bacteria | 6718 |
| 167 | Ga0496105_0017585 | 3300048908 | Bacteria | 5735 |
| 168 | Ga0496106_0087911 | 3300048909 | Bacteria | 2395 |
| 169 | Ga0496106_0176739 | 3300048909 | Bacteria | 1694 |
| 170 | Ga0496108_0006062 | 3300048911 | Bacteria | 9776 |
| 171 | Ga0496108_0061143 | 3300048911 | Bacteria | 3169 |
| 172 | Ga0496109_0034550 | 3300048912 | Bacteria | 4555 |
| 173 | Ga0496109_0043464 | 3300048912 | Bacteria | 4073 |
| 174 | Ga0496109_0151255 | 3300048912 | Bacteria | 2173 |
| 175 | Ga0496110_0001243 | 3300048913 | Bacteria | 18183 |
| 176 | Ga0496110_0047742 | 3300048913 | Bacteria | 3751 |
| 177 | Ga0496111_0131936 | 3300048914 | Bacteria | 1849 |
| 178 | Ga0496114_0009844 | 3300048917 | Bacteria | 7599 |
| 179 | Ga0496114_0076685 | 3300048917 | Bacteria | 2817 |
| 180 | Ga0496116_0000328 | 3300048919 | Bacteria | 76892 |
| 181 | Ga0496117_0000109 | 3300048920 | Bacteria | 184635 |
| 182 | Ga0496118_0000132 | 3300048921 | Bacteria | 131401 |
| 183 | Ga0496119_0000534 | 3300048922 | Bacteria | 51791 |
| 184 | Ga0496120_0002712 | 3300048923 | Bacteria | 17322 |
| 185 | Ga0496121_0021844 | 3300048924 | Bacteria | 6249 |
| 186 | Ga0496124_0021166 | 3300048927 | Bacteria | 5995 |
| 187 | Ga0496125_0055483 | 3300048928 | Bacteria | 3227 |
| 188 | Ga0496126_0000345 | 3300048929 | Bacteria | 97255 |
| 189 | Ga0501047_0044369 | 3300049581 | Bacteria | 4296 |
| 190 | Ga0501077_0045552 | 3300049593 | Bacteria | 2787 |
| 191 | nmdc:mga06r32_272_c5 | 3300050510 | Bacteria | 15758 |
| 192 | Ga0495619_0008690 | 3300053085 | Bacteria | 6424 |
| 193 | Ga0466962_0077950 | 3300061719 | Bacteria | 1584 |
| 194 | 2523385158 | 2523231044 | Bacteria | 6434991 |
| 195 | 2548696691 | 2547132424 | Bacteria | 8348532 |
| 196 | 2552108782 | 2551306166 | Bacteria | 9731570 |
| 197 | 2558908472 | 2558860112 | Bacteria | 9931328 |
| 198 | 2559423810 | 2558860280 | Bacteria | 11429938 |
| 199 | 2583151197 | 2582580736 | Bacteria | 5325865 |
| 200 | 2586062254 | 2585427649 | Bacteria | 9053857 |
| 201 | 2644445114 | 2643221679 | Bacteria | 3839507 |
| 202 | 2676475190 | 2675903058 | Bacteria | 6822861 |
| 203 | 2738890102 | 2738541308 | Bacteria | 7020677 |
| 204 | 2753034954 | 2751185725 | Bacteria | 5740550 |
| 205 | 2753074012 | 2751185734 | Bacteria | 8863695 |
| 206 | 2753323471 | 2751185792 | Bacteria | 5739090 |
| 207 | 2776372096 | 2775506925 | Bacteria | 7237746 |
| 208 | 2795786670 | 2795385470 | Bacteria | 8317180 |
| 209 | 2795792784 | 2795385472 | Bacteria | 6627535 |
| 210 | 2795793230 | 2795385472 | Bacteria | 6627535 |
| 211 | 2809588572 | 2808606522 | Bacteria | 9488490 |
| 212 | 2816510393 | 2816332139 | Bacteria | 9138787 |
| 213 | 2827629877 | 2827628540 | Bacteria | 6858585 |
| 214 | 2842889441 | 2842888712 | Bacteria | 4279094 |
| 215 | 2863068155 | 2863067949 | Bacteria | 8541735 |
| 216 | 2866556771 | 2866552031 | Bacteria | 5824618 |
| 217 | 2866614582 | 2866612099 | Bacteria | 7543886 |
| 218 | 2870725717 | 2870721527 | Bacteria | 9689237 |
| 219 | 2891329978 | 2891326441 | Bacteria | 6439512 |
| 220 | 2899365258 | 2899359706 | Bacteria | 10940472 |
| 221 | 2899372859 | 2899370129 | Bacteria | 6781179 |
| 222 | 2904769749 | 2904765812 | Bacteria | 5369154 |
| 223 | 2904771391 | 2904770941 | Bacteria | 5580202 |
| 224 | 2908816202 | 2908811453 | Bacteria | 5478616 |
| 225 | 2915358779 | 2915358134 | Bacteria | 6050864 |
| 226 | 2915770286 | 2915768154 | Bacteria | 8424322 |
| 227 | 2917739460 | 2917736166 | Bacteria | 9690793 |
| 228 | 2919423114 | 2919420072 | Bacteria | 5390363 |
| 229 | 2919435722 | 2919432681 | Bacteria | 5390474 |
| 230 | 2919450475 | 2919446982 | Bacteria | 3994487 |
| 231 | 2919717688 | 2919713450 | Bacteria | 7431245 |
| 232 | 2932399113 | 2932398195 | Bacteria | 3847976 |
| 233 | 2974317577 | 2974315732 | Bacteria | 4602776 |
| 234 | 2984525785 | 2984523437 | Bacteria | 4508481 |
| 235 | 3001891515 | 3001889506 | Bacteria | 2975194 |
| 236 | 3003009390 | 3002998708 | Bacteria | 11715108 |
| 237 | 8003323848 | 8003314358 | Bacteria | 10575343 |
| 238 | 8047716940 | 8047710418 | Bacteria | 11023148 |
| 239 | 8053953949 | 8053945823 | Bacteria | 8962862 |
| 240 | 8054473996 | 8054472261 | Bacteria | 7464355 |
| 241 | 8056063004 | 8056060235 | Bacteria | 7259403 |
| 242 | 8056211206 | 8056207758 | Bacteria | 8639239 |
| 243 | Ga0496108_0027972 | |||
| 244 | JGI24745J21846_1000678 | |||
| 245 | Ga0070660_100078228 | |||
| 246 | Ga0070668_100009293 | |||
| 247 | Ga0070668_100051232 | |||
| 248 | Ga0070668_100199558 | |||
| 249 | Ga0070671_100000431 | |||
| 250 | Ga0070667_100307587 | |||
| 251 | Ga0070714_100013131 | |||
| 252 | Ga0070714_100132919 | |||
| 253 | Ga0070700_100049625 | |||
| 254 | Ga0070663_100010788 | |||
| 255 | Ga0070663_100041300 | |||
| 256 | Ga0070678_100057193 | |||
| 257 | Ga0070681_10029166 | |||
| 258 | Ga0070685_10094070 | |||
| 259 | Ga0070679_100068333 | |||
| 260 | Ga0070696_100052843 | |||
| 261 | Ga0070665_100008865 | |||
| 262 | Ga0070665_100176205 | |||
| 263 | Ga0068856_100324735 | |||
| 264 | Ga0068856_100370606 | |||
| 265 | Ga0068852_100086370 | |||
| 266 | Ga0068852_100328875 | |||
| 267 | Ga0068866_10121842 | |||
| 268 | Ga0068861_100226337 | |||
| 269 | Ga0068863_100024821 | |||
| 270 | Ga0068863_100042549 | |||
| 271 | Ga0068858_100000021 | |||
| 272 | Ga0068858_100180070 | |||
| 273 | Ga0068860_100021633 | |||
| 274 | Ga0068862_100106207 | |||
| 275 | Ga0081455_10000297 | |||
| 276 | Ga0075370_10010674 | |||
| 277 | Ga0075431_100015970 | |||
| 278 | Ga0075434_100021010 | |||
| 279 | Ga0075435_100199153 | |||
| 280 | Ga0105240_10332172 | |||
| 281 | Ga0111539_10095261 | |||
| 282 | Ga0105243_10026448 | |||
| 283 | Ga0105248_10000239 | |||
| 284 | Ga0105248_10243017 | |||
| 285 | Ga0105237_10177160 | |||
| 286 | Ga0105238_10066288 | |||
| 287 | Ga0105238_10091019 | |||
| 288 | Ga0157374_10118679 | |||
| 289 | Ga0163163_10079261 | |||
| 290 | Ga0157379_10000005 | |||
| 291 | Ga0157379_10005809 | |||
| 292 | Ga0163161_10029059 | |||
| 293 | Ga0163161_10095599 | |||
| 294 | Ga0206349_1843421 | |||
| 295 | Ga0206351_10748984 | |||
| 296 | Ga0206350_10828911 | |||
| 297 | Ga0213873_10000148 | |||
| 298 | Ga0213876_10013261 | |||
| 299 | Ga0213875_10000073 | |||
| 300 | Ga0224712_10000539 | |||
| 301 | Ga0207688_10036477 | |||
| 302 | Ga0207643_10017190 | |||
| 303 | Ga0207705_10159301 | |||
| 304 | Ga0207707_10103837 | |||
| 305 | Ga0207671_10072423 | |||
| 306 | Ga0207662_10012615 | |||
| 307 | Ga0207657_10042380 | |||
| 308 | Ga0207657_10119875 | |||
| 309 | Ga0207694_10121280 | |||
| 310 | Ga0207700_10042105 | |||
| 311 | Ga0207664_10008529 | |||
| 312 | Ga0207644_10008602 | |||
| 313 | Ga0207706_10082192 | |||
| 314 | Ga0207670_10177478 | |||
| 315 | Ga0207711_10000321 | |||
| 316 | Ga0207689_10212682 | |||
| 317 | Ga0207668_10056105 | |||
| 318 | Ga0207640_10071665 | |||
| 319 | Ga0207658_10109657 | |||
| 320 | Ga0207677_10015012 | |||
| 321 | Ga0207703_10000001 | |||
| 322 | Ga0207703_10049358 | |||
| 323 | Ga0207703_10193104 | |||
| 324 | Ga0207678_10021468 | |||
| 325 | Ga0207708_10006256 | |||
| 326 | Ga0207641_10003337 | |||
| 327 | Ga0207641_10232891 | |||
| 328 | Ga0207648_10104405 | |||
| 329 | Ga0207675_100068865 | |||
| 330 | Ga0207683_10081548 | |||
| 331 | Ga0207683_10133113 | |||
| 332 | Ga0268266_10073473 | |||
| 333 | Ga0268266_10122795 | |||
| 334 | Ga0268264_10025283 | |||
| 335 | Ga0307515_10054539 | |||
| 336 | Ga0307511_10001996 | |||
| 337 | Ga0265327_10000081 | |||
| 338 | Ga0265327_10001957 | |||
| 339 | Ga0265327_10027896 | |||
| 340 | Ga0307513_10007498 | |||
| 341 | Ga0307513_10036817 | |||
| 342 | Ga0316575_10015389 | |||
| 343 | Ga0316579_10006756 | |||
| 344 | Ga0316576_10006118 | |||
| 345 | Ga0307413_10147470 | |||
| 346 | Ga0307518_10001710 | |||
| 347 | Ga0307410_10035107 | |||
| 348 | Ga0326468_10001567 | |||
| 349 | Ga0307409_100265181 | |||
| 350 | Ga0316583_10004031 | |||
| 351 | Ga0316580_10011090 | |||
| 352 | Ga0307507_10009186 | |||
| 353 | Ga0307507_10027754 | |||
| 354 | Ga0373956_0009115 | |||
| 355 | Ga0373960_0012651 | |||
| 356 | Ga0316574_0027456 | |||
| 357 | Ga0265778_000054 | |||
| 358 | Ga0316582_0011643 | |||
| 359 | Ga0316584_0030703 | |||
| 360 | Ga0373925_0050494 | |||
| 361 | Ga0395899_0048784 | |||
| 362 | Ga0316581_0000320 | |||
| 363 | Ga0436364_0238329 | |||
| 364 | Ga0436364_0290389 | |||
| 365 | Ga0436365_0140900 | |||
| 366 | Ga0436365_0443017 | |||
| 367 | Ga0436362_0388883 | |||
| 368 | Ga0451791_0214161 | |||
| 369 | Ga0451797_0391647 | |||
| 370 | Ga0466972_0002073 | |||
| 371 | Ga0466965_0012173 | |||
| 372 | Ga0466966_0023626 | |||
| 373 | Ga0466966_0024196 | |||
| 374 | Ga0466963_0000103 | |||
| 375 | Ga0466963_0080291 | |||
| 376 | Ga0466963_0268049 | |||
| 377 | Ga0466971_0008402 | |||
| 378 | Ga0466968_0002097 | |||
| 379 | Ga0466970_0008906 | |||
| 380 | Ga0466957_0002744 | |||
| 381 | Ga0466957_0034566 | |||
| 382 | Ga0466960_0000616 | |||
| 383 | Ga0466960_0104199 | |||
| 384 | Ga0466959_0036915 | |||
| 385 | Ga0466959_0064504 | |||
| 386 | Ga0466959_0177763 | |||
| 387 | Ga0466958_0000096 | |||
| 388 | Ga0466958_0035030 | |||
| 389 | Ga0466958_0037472 | |||
| 390 | Ga0466967_0001005 | |||
| 391 | Ga0466967_0001459 | |||
| 392 | Ga0466967_0028577 | |||
| 393 | Ga0466967_0046387 | |||
| 394 | Ga0466967_0070477 | |||
| 395 | Ga0466967_0242678 | |||
| 396 | Ga0495603_0032947 | |||
| 397 | Ga0495650_0074627 | |||
| 398 | Ga0495580_0136648 | |||
| 399 | Ga0495662_0092490 | |||
| 400 | Ga0495608_0072367 | |||
| 401 | Ga0495665_0033660 | |||
| 402 | Ga0495656_0028069 | |||
| 403 | Ga0496100_0008042 | |||
| 404 | Ga0496100_0064136 | |||
| 405 | Ga0496101_0011744 | |||
| 406 | Ga0496102_0000046 | |||
| 407 | Ga0496103_0000392 | |||
| 408 | Ga0496104_0016450 | |||
| 409 | Ga0496105_0017585 | |||
| 410 | Ga0496106_0087911 | |||
| 411 | Ga0496106_0176739 | |||
| 412 | Ga0496108_0006062 | |||
| 413 | Ga0496108_0061143 | |||
| 414 | Ga0496109_0034550 | |||
| 415 | Ga0496109_0043464 | |||
| 416 | Ga0496109_0151255 | |||
| 417 | Ga0496110_0001243 | |||
| 418 | Ga0496110_0047742 | |||
| 419 | Ga0496111_0131936 | |||
| 420 | Ga0496114_0009844 | |||
| 421 | Ga0496114_0076685 | |||
| 422 | Ga0496116_0000328 | |||
| 423 | Ga0496117_0000109 | |||
| 424 | Ga0496118_0000132 | |||
| 425 | Ga0496119_0000534 | |||
| 426 | Ga0496120_0002712 | |||
| 427 | Ga0496121_0021844 | |||
| 428 | Ga0496124_0021166 | |||
| 429 | Ga0496125_0055483 | |||
| 430 | Ga0496126_0000345 | |||
| 431 | Ga0501047_0044369 | |||
| 432 | Ga0501077_0045552 | |||
| 433 | nmdc:mga06r32_272_c5 | |||
| 434 | Ga0495619_0008690 | |||
| 435 | Ga0466962_0077950 | |||
| 436 | 2523385158 | |||
| 437 | 2548696691 | |||
| 438 | 2552108782 | |||
| 439 | 2558908472 | |||
| 440 | 2559423810 | |||
| 441 | 2583151197 | |||
| 442 | 2586062254 | |||
| 443 | 2644445114 | |||
| 444 | 2676475190 | |||
| 445 | 2738890102 | |||
| 446 | 2753034954 | |||
| 447 | 2753074012 | |||
| 448 | 2753323471 | |||
| 449 | 2776372096 | |||
| 450 | 2795786670 | |||
| 451 | 2795792784 | |||
| 452 | 2795793230 | |||
| 453 | 2809588572 | |||
| 454 | 2816510393 | |||
| 455 | 2827629877 | |||
| 456 | 2842889441 | |||
| 457 | 2863068155 | |||
| 458 | 2866556771 | |||
| 459 | 2866614582 | |||
| 460 | 2870725717 | |||
| 461 | 2891329978 | |||
| 462 | 2899365258 | |||
| 463 | 2899372859 | |||
| 464 | 2904769749 | |||
| 465 | 2904771391 | |||
| 466 | 2908816202 | |||
| 467 | 2915358779 | |||
| 468 | 2915770286 | |||
| 469 | 2917739460 | |||
| 470 | 2919423114 | |||
| 471 | 2919435722 | |||
| 472 | 2919450475 | |||
| 473 | 2919717688 | |||
| 474 | 2932399113 | |||
| 475 | 2974317577 | |||
| 476 | 2984525785 | |||
| 477 | 3001891515 | |||
| 478 | 3003009390 | |||
| 479 | 8003323848 | |||
| 480 | 8047716940 | |||
| 481 | 8053953949 | |||
| 482 | 8054473996 | |||
| 483 | 8056063004 | |||
| 484 | 8056211206 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8odq-assembly1.cif.gz_D | sufs-sufu complex from mycobacterium tuberculosis | 0.9876 | 1 | 416 |
| 8odq-assembly1.cif.gz_B | sufs-sufu complex from mycobacterium tuberculosis | 0.987 | 1 | 413 |
| 8odq-assembly1.cif.gz_D | sufs-sufu complex from mycobacterium tuberculosis | 0.9852 | 1 | 416 |
| 8odq-assembly1.cif.gz_B | sufs-sufu complex from mycobacterium tuberculosis | 0.9822 | 1 | 413 |
| 6ndn-assembly1.cif.gz_A | crystal structure of selenocysteine lyase from escherichia coli | 0.9741 | 1 | 412 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WQ69_308_406_3.90.1150.10 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9847 | 309 | 404 | 3.90.1150.10 |
| af_P9WQ69_42_299_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9839 | 35 | 298 | 3.40.640.10 |
| 4w91I01 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.982 | 303 | 413 | 3.90.1150.10 |
| af_P9WQ69_42_299_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9802 | 35 | 298 | 3.40.640.10 |
| af_Q2FZY5_300_413_3.90.1150.10 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9718 | 302 | 413 | 3.90.1150.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7Y6GMA5-F1-model_v4 | cysteine desulfurase (EC 2.8.1.7) | 0.9877 | 123 | 396 |
GO:0006534
GO:0008483 GO:0030170 GO:0031071 |
| AF-A0A7K0VEB1-F1-model_v4 | cysteine desulfurase (EC 2.8.1.7) | 0.9854 | 1 | 350 |
GO:0006534
GO:0008483 GO:0030170 GO:0031071 |
| AF-A0A353A3C0-F1-model_v4 | cysteine desulfurase (EC 2.8.1.7) | 0.9834 | 130 | 413 |
GO:0006534
GO:0030170 GO:0031071 |
| AF-A0A521MUL4-F1-model_v4 | Cysteine desulfurase (EC 2.8.1.7) | 0.9819 | 3 | 416 |
GO:0006534
GO:0030170 GO:0031071 |
| AF-A0A3D5C1P9-F1-model_v4 | Cysteine desulfurase | 0.9805 | 188 | 416 |
|