F354984

General Info

Members Datasets Scaffolds Average Seq Length
242 183 230 313

Family's Representative Sequence

Representative Sequence 3300046559|Ga0495667_0179602|Ga0495667_0179602_121_1242
Length 373
Sequence MTNPQPQTSDAVLQLRNVTKFYGSFKAVDDLTFSLPRGSICGFLGPNGAGKTTTIRMILEIIKPTSGSITILGSSSALEVRQRIGYLPEEKGLYKKMKSWAVIAYFATLKGMSKKDAKRRAFELLERYGLKDFANKPTDALSKGMGQKVQMLASLAHDPEFVILDEPFSGLDPVNQQVMEEIIREMAGRGRTVLFSTHVMQHAERLCDRILLIAKGKMIFDGTISQAKETIPRRVKLETEDDVGPLRELPEVRSARMLETTNGHAGMRPATPRFGSSAAAIQEANGTPNTSGRAGEGVRAATEAPPPGLAGGTPQNAAAHWELELADHADPQAILQTCFARGIRLRSFNQSEPTLHEVFMRLVGPEAKEASFR

Samples

Sample ID Description Type Environment
1 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
2 2643221640 Caulobacter sp. Root342 Isolate Unclassified
3 2643221642 Caulobacter sp. Root343 Isolate Unclassified
4 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
5 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
6 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
7 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
8 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
9 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
10 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
11 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
18 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
21 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
22 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
27 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
28 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
71 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
99 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
100 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
104 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
122 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
123 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
124 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
125 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
128 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
133 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
134 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
135 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
136 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
137 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
138 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
139 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
140 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
141 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
142 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
143 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
144 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
145 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
146 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
147 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
148 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
149 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
150 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
153 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
154 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
155 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
156 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
157 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
158 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
168 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
169 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
170 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
171 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
172 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
173 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
174 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
175 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
176 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
177 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
178 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
179 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
180 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
181 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.21
Metatranscriptomes 0.83
Isolates 4.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.55
Nodule 0
Rhizoplane 0.83
Rhizosphere 83.88
Stem 0
Stem Tuber 0
Unclassified 10.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10116622 3300003320 Bacteria 1724
2 rootH2_10143379 3300003320 Bacteria 2705
3 rootL2_10203111 3300003322 Bacteria 1832
4 Ga0006562J51391_1106651 3300003578 Bacteria 2090
5 Ga0006562J51391_1106654 3300003578 Bacteria 990
6 Ga0055536_1002048 3300003781 Bacteria 11535
7 Ga0055531_10013027 3300003794 Bacteria 3863
8 Ga0070658_10023100 3300005327 Bacteria 4992
9 Ga0070658_10102879 3300005327 Bacteria 2362
10 Ga0070683_100098361 3300005329 Bacteria 2754
11 Ga0070670_100043878 3300005331 Bacteria 3844
12 Ga0070680_100018079 3300005336 Bacteria 5568
13 Ga0070680_100134364 3300005336 Bacteria 2071
14 Ga0070689_100059341 3300005340 Bacteria 2973
15 Ga0070661_100189061 3300005344 Bacteria 1570
16 Ga0070669_100350021 3300005353 Bacteria 1199
17 Ga0070674_100106326 3300005356 Bacteria 2053
18 Ga0070673_100052025 3300005364 Bacteria 3211
19 Ga0070688_100155196 3300005365 Bacteria 1568
20 Ga0070688_100189076 3300005365 Bacteria 1433
21 Ga0070703_10098953 3300005406 Bacteria 1025
22 Ga0070700_100278962 3300005441 Bacteria 1211
23 Ga0070678_100008284 3300005456 Bacteria 6220
24 Ga0070681_10025271 3300005458 Bacteria 5974
25 Ga0070681_10058360 3300005458 Bacteria 3839
26 Ga0068867_100347726 3300005459 Bacteria 1236
27 Ga0070706_100233230 3300005467 Bacteria 1718
28 Ga0070679_100005338 3300005530 Bacteria 11894
29 Ga0068853_100030401 3300005539 Bacteria 4562
30 Ga0068853_100052900 3300005539 Bacteria 3497
31 Ga0070672_100111993 3300005543 Bacteria 2225
32 Ga0070696_100149907 3300005546 Bacteria 1711
33 Ga0070665_100004269 3300005548 Bacteria 15023
34 Ga0070664_100459173 3300005564 Bacteria 1170
35 Ga0068857_100002094 3300005577 Bacteria 16222
36 Ga0068857_100151522 3300005577 Bacteria 2101
37 Ga0068854_100363446 3300005578 Bacteria 1188
38 Ga0068859_100084616 3300005617 Bacteria 3217
39 Ga0068861_100014447 3300005719 Bacteria 5543
40 Ga0068863_100057816 3300005841 Bacteria 3670
41 Ga0097621_100002383 3300006237 Bacteria 12886
42 Ga0097621_100003968 3300006237 Bacteria 10250
43 Ga0097621_100033615 3300006237 Bacteria 4085
44 Ga0097621_100045563 3300006237 Bacteria 3543
45 Ga0097621_100321256 3300006237 Bacteria 1371
46 Ga0068871_100014727 3300006358 Bacteria 5836
47 Ga0068871_100233631 3300006358 Bacteria 1597
48 Ga0068871_100483347 3300006358 Bacteria 1114
49 Ga0075431_100050526 3300006847 Bacteria 4287
50 Ga0075431_100249670 3300006847 Bacteria 1803
51 Ga0075434_100239335 3300006871 Bacteria 1835
52 Ga0068865_100011652 3300006881 Bacteria 5509
53 Ga0097620_100084617 3300006931 Bacteria 3217
54 Ga0105240_10114163 3300009093 Bacteria 3263
55 Ga0111539_10035067 3300009094 Bacteria 6076
56 Ga0111539_10274862 3300009094 Bacteria 1960
57 Ga0111539_10460609 3300009094 Bacteria 1481
58 Ga0105245_10493649 3300009098 Bacteria 1239
59 Ga0114129_10620158 3300009147 Bacteria 1399
60 Ga0105243_10252332 3300009148 Bacteria 1576
61 Ga0105242_10006174 3300009176 Bacteria 9230
62 Ga0105242_10008693 3300009176 Bacteria 7790
63 Ga0105242_10160773 3300009176 Bacteria 1966
64 Ga0105242_10469723 3300009176 Bacteria 1190
65 Ga0105238_10036974 3300009551 Bacteria 4964
66 Ga0157373_10009929 3300013100 Bacteria 7017
67 Ga0157373_10013331 3300013100 Bacteria 6031
68 Ga0157371_10021650 3300013102 Bacteria 4718
69 Ga0157371_10028655 3300013102 Bacteria 4031
70 Ga0157370_10088085 3300013104 Bacteria 2915
71 Ga0157370_10108439 3300013104 Bacteria 2596
72 Ga0157369_10014281 3300013105 Bacteria 8970
73 Ga0157378_10060207 3300013297 Bacteria 3388
74 Ga0163162_10060258 3300013306 Bacteria 3830
75 Ga0157372_10179630 3300013307 Bacteria 2449
76 Ga0157380_10109773 3300014326 Bacteria 2315
77 Ga0157376_10371065 3300014969 Bacteria 1375
78 Ga0183365_10003 3300015684 Bacteria 414944
79 Ga0163161_10055749 3300017792 Bacteria 2869
80 Ga0163161_10173517 3300017792 Bacteria 1650
81 Ga0213872_10081632 3300021361 Bacteria 1452
82 Ga0213876_10010415 3300021384 Bacteria 4991
83 Ga0213875_10015338 3300021388 Bacteria 3729
84 Ga0209676_1000046 3300025292 Bacteria 409173
85 Ga0209676_1003461 3300025292 Bacteria 9692
86 Ga0209050_1007266 3300025298 Bacteria 6269
87 Ga0209257_1000409 3300025304 Bacteria 83301
88 Ga0207682_10006083 3300025893 Bacteria 4878
89 Ga0207645_10169932 3300025907 Bacteria 1428
90 Ga0207705_10048927 3300025909 Bacteria 3042
91 Ga0207707_10033727 3300025912 Bacteria 4480
92 Ga0207695_10052239 3300025913 Bacteria 4283
93 Ga0207657_10082419 3300025919 Bacteria 2700
94 Ga0207652_10178169 3300025921 Bacteria 1909
95 Ga0207686_10019970 3300025934 Bacteria 3821
96 Ga0207686_10137588 3300025934 Bacteria 1684
97 Ga0207670_10010966 3300025936 Bacteria 5237
98 Ga0207670_10111575 3300025936 Bacteria 1972
99 Ga0207704_10063947 3300025938 Bacteria 2296
100 Ga0207691_10032314 3300025940 Bacteria 4880
101 Ga0207689_10035930 3300025942 Bacteria 4113
102 Ga0207661_10054526 3300025944 Bacteria 3203
103 Ga0207667_10168861 3300025949 Bacteria 2249
104 Ga0207668_10031640 3300025972 Bacteria 3487
105 Ga0207658_10179797 3300025986 Bacteria 1750
106 Ga0207639_10022498 3300026041 Bacteria 4541
107 Ga0207702_10141294 3300026078 Bacteria 2179
108 Ga0207641_10123839 3300026088 Bacteria 2311
109 Ga0207674_10002014 3300026116 Bacteria 25815
110 Ga0207675_100029205 3300026118 Bacteria 5138
111 Ga0207683_10021524 3300026121 Bacteria 5523
112 Ga0268266_10000373 3300028379 Bacteria 68755
113 Ga0265338_10002138 3300028800 Bacteria 30367
114 Ga0265338_10002142 3300028800 Bacteria 30346
115 Ga0265338_10071527 3300028800 Bacteria 2967
116 Ga0265338_10199375 3300028800 Bacteria 1510
117 Ga0265324_10043964 3300029957 Bacteria 1541
118 Ga0265320_10011682 3300031240 Bacteria 5156
119 Ga0265325_10009913 3300031241 Bacteria 5542
120 Ga0265339_10033988 3300031249 Bacteria 2868
121 Ga0265331_10049515 3300031250 Bacteria 2018
122 Ga0265313_10002218 3300031595 Bacteria 17114
123 Ga0265313_10079906 3300031595 Bacteria 1487
124 Ga0307508_10237415 3300031616 Bacteria 1421
125 Ga0265314_10030796 3300031711 Bacteria 3968
126 Ga0307413_10242780 3300031824 Bacteria 1331
127 Ga0307407_10028124 3300031903 Bacteria 3001
128 Ga0307412_10009411 3300031911 Bacteria 5606
129 Ga0307412_10061666 3300031911 Bacteria 2522
130 Ga0307409_100050084 3300031995 Bacteria 3188
131 Ga0307414_10023963 3300032004 Bacteria 3882
132 Ga0307414_10197475 3300032004 Bacteria 1633
133 Ga0307414_10245392 3300032004 Bacteria 1485
134 Ga0307411_10004839 3300032005 Bacteria 6532
135 Ga0307411_10121349 3300032005 Bacteria 1892
136 Ga0373931_0126359 3300035691 Bacteria 1467
137 Ga0373925_0138985 3300037068 Bacteria 1900
138 Ga0395899_0089840 3300037312 Bacteria 2228
139 Ga0395900_0105637 3300037418 Bacteria 2893
140 Ga0395900_0181257 3300037418 Bacteria 2140
141 Ga0395898_0028287 3300037466 Bacteria 5620
142 Ga0436364_1345536 3300037853 Bacteria 6031
143 Ga0395901_0116778 3300038443 Bacteria 2803
144 Ga0436365_0788250 3300039437 Bacteria 1019
145 Ga0436365_1187977 3300039437 Bacteria 4980
146 Ga0436361_0222433 3300039447 Bacteria 17180
147 Ga0436363_1602788 3300039450 Bacteria 1670
148 Ga0439449_0080405 3300042007 Bacteria 1202
149 Ga0466969_0005795 3300044656 Bacteria 6562
150 Ga0453683_0012556 3300044673 Bacteria 5549
151 Ga0453683_0271041 3300044673 Bacteria 1083
152 Ga0466966_0007797 3300044684 Bacteria 7089
153 Ga0453684_0001584 3300044712 Bacteria 62821
154 Ga0453684_0007845 3300044712 Bacteria 19437
155 Ga0453684_0008878 3300044712 Bacteria 17807
156 Ga0466971_0001574 3300044719 Bacteria 9633
157 Ga0466970_0023569 3300044765 Bacteria 3215
158 Ga0466957_0001170 3300044842 Bacteria 13616
159 Ga0466959_0002683 3300045049 Bacteria 11425
160 Ga0466959_0013699 3300045049 Bacteria 5886
161 Ga0466959_0238267 3300045049 Bacteria 1257
162 Ga0451576_0000016 3300045051 Bacteria 565050
163 Ga0451576_0000481 3300045051 Bacteria 88715
164 Ga0451576_0245241 3300045051 Bacteria 1872
165 Ga0451576_0681679 3300045051 Bacteria 1080
166 Ga0495629_0060424 3300046459 Bacteria 2649
167 Ga0495641_0120571 3300046461 Bacteria 1170
168 Ga0495582_0009162 3300046473 Bacteria 5461
169 Ga0495608_0004609 3300046511 Bacteria 9843
170 Ga0495628_0005525 3300046516 Bacteria 11063
171 Ga0495630_0000353 3300046517 Bacteria 36544
172 Ga0495666_0034343 3300046526 Bacteria 2475
173 Ga0495666_0045944 3300046526 Bacteria 2106
174 Ga0495640_0056621 3300046533 Bacteria 2678
175 Ga0495586_0000290 3300046535 Bacteria 31971
176 Ga0495586_0013311 3300046535 Bacteria 4361
177 Ga0495586_0131946 3300046535 Bacteria 1399
178 Ga0495645_0159302 3300046543 Unclassified 1562
179 Ga0495633_0000788 3300046558 Bacteria 28326
180 Ga0495667_0002360 3300046559 Bacteria 12621
181 Ga0495667_0179602 3300046559 Unclassified 1359
182 Ga0495634_0004730 3300046642 Bacteria 10594
183 Ga0495634_0096670 3300046642 Bacteria 1912
184 Ga0495599_0032061 3300046678 Bacteria 3298
185 Ga0495647_0007464 3300046681 Bacteria 3664
186 Ga0495658_0000596 3300046683 Bacteria 19763
187 Ga0495669_0092460 3300046684 Bacteria 1398
188 Ga0495613_0006009 3300046689 Bacteria 9084
189 Ga0495613_0080519 3300046689 Bacteria 2367
190 Ga0495649_0000451 3300046694 Bacteria 35487
191 Ga0495674_0000691 3300047319 Bacteria 31861
192 Ga0495676_0134493 3300047321 Bacteria 1780
193 Ga0495684_0089805 3300047471 Unclassified 2328
194 Ga0496107_0048823 3300048910 Bacteria 3050
195 Ga0496109_0441983 3300048912 Bacteria 1228
196 Ga0496116_0076755 3300048919 Bacteria 2091
197 Ga0496122_0073869 3300048925 Bacteria 2415
198 Ga0496123_0000512 3300048926 Bacteria 67458
199 Ga0496125_0000387 3300048928 Bacteria 82001
200 Ga0501033_0022230 3300049570 Bacteria 4785
201 Ga0501034_0197417 3300049571 Bacteria 1972
202 Ga0501034_0213966 3300049571 Bacteria 1882
203 Ga0501034_0436515 3300049571 Bacteria 1229
204 Ga0501038_0216809 3300049574 Bacteria 1529
205 Ga0501046_0006587 3300049580 Bacteria 10258
206 Ga0501047_0000370 3300049581 Bacteria 50827
207 Ga0501047_0000432 3300049581 Bacteria 46529
208 Ga0501047_0272892 3300049581 Bacteria 1537
209 Ga0501067_0083402 3300049583 Bacteria 1773
210 Ga0501070_0082576 3300049586 Bacteria 2660
211 Ga0501071_0108891 3300049587 Bacteria 2047
212 Ga0501072_0288250 3300049588 Bacteria 1305
213 Ga0501079_0372151 3300049741 Bacteria 1120
214 Ga0501080_0006093 3300049742 Bacteria 10810
215 Ga0501083_0016282 3300049744 Bacteria 5206
216 Ga0501035_0035077 3300049822 Bacteria 4555
217 Ga0501035_0091135 3300049822 Bacteria 2683
218 nmdc:mga06r32_138181_c1 3300050510 Bacteria 2411
219 nmdc:mga08y16_114599_c1 3300050511 Bacteria 2806
220 nmdc:mga08y16_274689_c1 3300050511 Bacteria 1739
221 nmdc:mga08x19_243989_c1 3300050514 Bacteria 1239
222 Ga0495601_0093769 3300053077 Bacteria 1934
223 Ga0500635_0019705 3300053080 Bacteria 2055
224 Ga0500651_0008807 3300053093 Bacteria 5964
225 Ga0500651_0029313 3300053093 Bacteria 3461
226 Ga0500566_0047373 3300053094 Bacteria 2468
227 Ga0500608_000278 3300053122 Bacteria 19784
228 Ga0501084_0026924 3300054114 Bacteria 4803
229 Ga0501082_0118113 3300060353 Bacteria 2297
230 Ga0466962_0002316 3300061719 Bacteria 9017

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300042007 Ga0439449_0080405 Ga0439449_0080405_61_837 252
2 3300048912 Ga0496109_0441983 Ga0496109_0441983_441_1217 252
3 3300046684 Ga0495669_0092460 Ga0495669_0092460_35_814 253
4 3300046543 Ga0495645_0159302 Ga0495645_0159302_566_1519 258
5 3300049571 Ga0501034_0436515 Ga0501034_0436515_442_1218 258
6 3300044656 Ga0466969_0005795 Ga0466969_0005795_1651_2580 282
7 3300044684 Ga0466966_0007797 Ga0466966_0007797_5995_6924 282
8 3300044719 Ga0466971_0001574 Ga0466971_0001574_6573_7502 282
9 3300044765 Ga0466970_0023569 Ga0466970_0023569_1702_2631 282
10 3300044842 Ga0466957_0001170 Ga0466957_0001170_5487_6416 282
11 3300045049 Ga0466959_0002683 Ga0466959_0002683_8129_9058 282
12 3300061719 Ga0466962_0002316 Ga0466962_0002316_1525_2454 282
13 3300045049 Ga0466959_0013699 Ga0466959_0013699_2055_2975 286
14 3300009098 Ga0105245_10493649 Ga0105245_104936491 287
15 3300053093 Ga0500651_0029313 Ga0500651_0029313_1244_2209 287
16 3300009094 Ga0111539_10274862 Ga0111539_102748622 288
17 3300005841 Ga0068863_100057816 Ga0068863_1000578163 295
18 3300006237 Ga0097621_100033615 Ga0097621_1000336153 295
19 3300006358 Ga0068871_100233631 Ga0068871_1002336312 295
20 3300017792 Ga0163161_10173517 Ga0163161_101735172 295
21 3300026088 Ga0207641_10123839 Ga0207641_101238392 295
22 3300005327 Ga0070658_10023100 Ga0070658_100231006 296
23 3300005329 Ga0070683_100098361 Ga0070683_1000983612 296
24 3300005336 Ga0070680_100134364 Ga0070680_1001343643 296
25 3300005458 Ga0070681_10025271 Ga0070681_100252715 296
26 3300005458 Ga0070681_10058360 Ga0070681_100583602 296
27 3300005530 Ga0070679_100005338 Ga0070679_10000533810 296
28 3300005539 Ga0068853_100052900 Ga0068853_1000529002 296
29 3300005548 Ga0070665_100004269 Ga0070665_1000042694 296
30 3300005577 Ga0068857_100151522 Ga0068857_1001515223 296
31 3300005578 Ga0068854_100363446 Ga0068854_1003634462 296
32 3300006237 Ga0097621_100003968 Ga0097621_1000039683 296
33 3300006358 Ga0068871_100014727 Ga0068871_1000147276 296
34 3300009093 Ga0105240_10114163 Ga0105240_101141632 296
35 3300009551 Ga0105238_10036974 Ga0105238_100369743 296
36 3300013104 Ga0157370_10088085 Ga0157370_100880854 296
37 3300013297 Ga0157378_10060207 Ga0157378_100602072 296
38 3300013307 Ga0157372_10179630 Ga0157372_101796302 296
39 3300025909 Ga0207705_10048927 Ga0207705_100489273 296
40 3300025912 Ga0207707_10033727 Ga0207707_100337274 296
41 3300025919 Ga0207657_10082419 Ga0207657_100824192 296
42 3300025921 Ga0207652_10178169 Ga0207652_101781692 296
43 3300025944 Ga0207661_10054526 Ga0207661_100545264 296
44 3300025949 Ga0207667_10168861 Ga0207667_101688612 296
45 3300026078 Ga0207702_10141294 Ga0207702_101412942 296
46 3300028379 Ga0268266_10000373 Ga0268266_1000037349 296
47 3300028800 Ga0265338_10002142 Ga0265338_1000214214 296
48 3300031241 Ga0265325_10009913 Ga0265325_100099136 296
49 3300031249 Ga0265339_10033988 Ga0265339_100339882 296
50 3300031250 Ga0265331_10049515 Ga0265331_100495152 296
51 3300031595 Ga0265313_10002218 Ga0265313_100022186 296
52 3300031595 Ga0265313_10079906 Ga0265313_100799062 296
53 3300031711 Ga0265314_10030796 Ga0265314_100307965 296
54 3300037312 Ga0395899_0089840 Ga0395899_0089840_580_1488 296
55 3300037418 Ga0395900_0181257 Ga0395900_0181257_651_1559 296
56 3300037466 Ga0395898_0028287 Ga0395898_0028287_2480_3388 296
57 3300038443 Ga0395901_0116778 Ga0395901_0116778_872_1780 296
58 3300044673 Ga0453683_0012556 Ga0453683_0012556_2601_3521 296
59 3300044712 Ga0453684_0001584 Ga0453684_0001584_59412_60323 296
60 3300044712 Ga0453684_0007845 Ga0453684_0007845_16680_17597 296
61 3300045051 Ga0451576_0000016 Ga0451576_0000016_63687_64598 296
62 3300045051 Ga0451576_0000481 Ga0451576_0000481_10123_11043 296
63 3300045051 Ga0451576_0681679 Ga0451576_0681679_103_1050 296
64 3300049580 Ga0501046_0006587 Ga0501046_0006587_5964_6872 296
65 3300049581 Ga0501047_0000432 Ga0501047_0000432_38243_39151 296
66 3300049581 Ga0501047_0272892 Ga0501047_0272892_232_1140 296
67 3300049574 Ga0501038_0216809 Ga0501038_0216809_238_1149 297
68 3300049586 Ga0501070_0082576 Ga0501070_0082576_1448_2359 297
69 3300049822 Ga0501035_0091135 Ga0501035_0091135_350_1261 297
70 iso_pu_bacteria 2895880812 2895881003 297
71 3300006358 Ga0068871_100483347 Ga0068871_1004833472 298
72 3300005353 Ga0070669_100350021 Ga0070669_1003500212 299
73 3300005467 Ga0070706_100233230 Ga0070706_1002332302 299
74 3300005617 Ga0068859_100084616 Ga0068859_1000846164 299
75 3300006931 Ga0097620_100084617 Ga0097620_1000846174 299
76 3300013102 Ga0157371_10021650 Ga0157371_100216504 299
77 3300014969 Ga0157376_10371065 Ga0157376_103710651 299
78 3300025972 Ga0207668_10031640 Ga0207668_100316403 299
79 3300031911 Ga0307412_10061666 Ga0307412_100616662 299
80 3300039437 Ga0436365_0788250 Ga0436365_0788250_55_975 299
81 3300039450 Ga0436363_1602788 Ga0436363_1602788_184_1107 299
82 3300045049 Ga0466959_0238267 Ga0466959_0238267_211_1131 299
83 3300046681 Ga0495647_0007464 Ga0495647_0007464_431_1351 299
84 3300049588 Ga0501072_0288250 Ga0501072_0288250_38_958 299
85 3300054114 Ga0501084_0026924 Ga0501084_0026924_3805_4725 299
86 3300005336 Ga0070680_100018079 Ga0070680_1000180796 300
87 3300005406 Ga0070703_10098953 Ga0070703_100989531 300
88 3300005719 Ga0068861_100014447 Ga0068861_1000144471 300
89 3300006881 Ga0068865_100011652 Ga0068865_1000116526 300
90 3300009094 Ga0111539_10035067 Ga0111539_100350672 300
91 3300009148 Ga0105243_10252332 Ga0105243_102523322 300
92 3300009176 Ga0105242_10008693 Ga0105242_100086933 300
93 3300013306 Ga0163162_10060258 Ga0163162_100602582 300
94 3300017792 Ga0163161_10055749 Ga0163161_100557492 300
95 3300021361 Ga0213872_10081632 Ga0213872_100816322 300
96 3300021384 Ga0213876_10010415 Ga0213876_100104156 300
97 3300025938 Ga0207704_10063947 Ga0207704_100639473 300
98 3300025942 Ga0207689_10035930 Ga0207689_100359303 300
99 3300026118 Ga0207675_100029205 Ga0207675_1000292059 300
100 3300031616 Ga0307508_10237415 Ga0307508_102374152 300
101 3300031824 Ga0307413_10242780 Ga0307413_102427802 300
102 3300032005 Ga0307411_10121349 Ga0307411_101213492 300
103 3300039437 Ga0436365_1187977 Ga0436365_1187977_3730_4656 300
104 3300039447 Ga0436361_0222433 Ga0436361_0222433_10856_11776 300
105 3300049570 Ga0501033_0022230 Ga0501033_0022230_826_1875 300
106 3300049571 Ga0501034_0197417 Ga0501034_0197417_95_1144 300
107 3300050511 nmdc:mga08y16_114599_c1 nmdc:mga08y16_114599_c1_1503_2429 300
108 iso_pu_bacteria 2643221640 2644224005 300
109 iso_pu_bacteria 2643221642 2644232991 300
110 iso_pu_bacteria 2928531327 2928534896 300
111 iso_pu_bacteria 2928972540 2928972695 300
112 iso_pu_bacteria 2977240413 2977242475 300
113 3300006871 Ga0075434_100239335 Ga0075434_1002393352 301
114 3300025986 Ga0207658_10179797 Ga0207658_101797971 301
115 3300044673 Ga0453683_0271041 Ga0453683_0271041_90_1019 301
116 3300049587 Ga0501071_0108891 Ga0501071_0108891_142_1098 301
117 3300049741 Ga0501079_0372151 Ga0501079_0372151_90_1046 301
118 3300049742 Ga0501080_0006093 Ga0501080_0006093_4112_5041 301
119 3300049744 Ga0501083_0016282 Ga0501083_0016282_2724_3653 301
120 3300060353 Ga0501082_0118113 Ga0501082_0118113_529_1458 301
121 iso_pu_bacteria 2643221574 2643883485 301
122 iso_pu_bacteria 2643221663 2644354017 301
123 iso_pu_bacteria 2643221699 2644551979 301
124 iso_pu_bacteria 2643221699 2644552352 301
125 3300005331 Ga0070670_100043878 Ga0070670_1000438782 302
126 3300005356 Ga0070674_100106326 Ga0070674_1001063262 302
127 3300005364 Ga0070673_100052025 Ga0070673_1000520253 302
128 3300005456 Ga0070678_100008284 Ga0070678_1000082846 302
129 3300005459 Ga0068867_100347726 Ga0068867_1003477261 302
130 3300006237 Ga0097621_100002383 Ga0097621_1000023832 302
131 3300006847 Ga0075431_100249670 Ga0075431_1002496702 302
132 3300009094 Ga0111539_10460609 Ga0111539_104606092 302
133 3300014326 Ga0157380_10109773 Ga0157380_101097732 302
134 3300021388 Ga0213875_10015338 Ga0213875_100153382 302
135 3300025907 Ga0207645_10169932 Ga0207645_101699322 302
136 3300026121 Ga0207683_10021524 Ga0207683_100215242 302
137 3300037853 Ga0436364_1345536 Ga0436364_1345536_2344_3282 302
138 3300046511 Ga0495608_0004609 Ga0495608_0004609_6116_7045 302
139 3300046516 Ga0495628_0005525 Ga0495628_0005525_2187_3116 302
140 3300046559 Ga0495667_0002360 Ga0495667_0002360_4209_5138 302
141 3300049581 Ga0501047_0000370 Ga0501047_0000370_40070_41002 302
142 3300049583 Ga0501067_0083402 Ga0501067_0083402_728_1738 302
143 3300050510 nmdc:mga06r32_138181_c1 nmdc:mga06r32_138181_c1_1111_2055 302
144 3300005344 Ga0070661_100189061 Ga0070661_1001890612 303
145 3300005539 Ga0068853_100030401 Ga0068853_1000304014 303
146 3300005543 Ga0070672_100111993 Ga0070672_1001119932 303
147 3300005564 Ga0070664_100459173 Ga0070664_1004591732 303
148 3300013100 Ga0157373_10009929 Ga0157373_100099296 303
149 3300013100 Ga0157373_10013331 Ga0157373_100133315 303
150 3300025893 Ga0207682_10006083 Ga0207682_100060832 303
151 3300025940 Ga0207691_10032314 Ga0207691_100323144 303
152 3300026041 Ga0207639_10022498 Ga0207639_100224982 303
153 3300028800 Ga0265338_10071527 Ga0265338_100715272 303
154 3300031903 Ga0307407_10028124 Ga0307407_100281242 303
155 3300031995 Ga0307409_100050084 Ga0307409_1000500842 303
156 3300032005 Ga0307411_10004839 Ga0307411_100048394 303
157 3300003578 Ga0006562J51391_1106651 Ga0006562J51391_11066511 304
158 3300003578 Ga0006562J51391_1106654 Ga0006562J51391_11066541 304
159 3300005327 Ga0070658_10102879 Ga0070658_101028792 304
160 3300005546 Ga0070696_100149907 Ga0070696_1001499072 304
161 3300005577 Ga0068857_100002094 Ga0068857_1000020942 304
162 3300009176 Ga0105242_10160773 Ga0105242_101607732 304
163 3300013102 Ga0157371_10028655 Ga0157371_100286552 304
164 3300013104 Ga0157370_10108439 Ga0157370_101084392 304
165 3300013105 Ga0157369_10014281 Ga0157369_1001428110 304
166 3300025934 Ga0207686_10137588 Ga0207686_101375882 304
167 3300026116 Ga0207674_10002014 Ga0207674_100020149 304
168 3300028800 Ga0265338_10002138 Ga0265338_1000213821 304
169 3300032004 Ga0307414_10245392 Ga0307414_102453922 304
170 3300046558 Ga0495633_0000788 Ga0495633_0000788_4091_5038 304
171 3300046678 Ga0495599_0032061 Ga0495599_0032061_56_1009 304
172 3300048925 Ga0496122_0073869 Ga0496122_0073869_1243_2190 304
173 3300048926 Ga0496123_0000512 Ga0496123_0000512_11391_12338 304
174 iso_pu_bacteria 2739367756 2739793402 304
175 3300003781 Ga0055536_1002048 Ga0055536_10020487 305
176 3300003794 Ga0055531_10013027 Ga0055531_100130272 305
177 3300025292 Ga0209676_1000046 Ga0209676_10000464 305
178 3300025292 Ga0209676_1003461 Ga0209676_10034614 305
179 3300025298 Ga0209050_1007266 Ga0209050_10072662 305
180 3300025304 Ga0209257_1000409 Ga0209257_100040966 305
181 3300028800 Ga0265338_10199375 Ga0265338_101993752 305
182 3300031911 Ga0307412_10009411 Ga0307412_100094115 305
183 3300032004 Ga0307414_10023963 Ga0307414_100239632 305
184 3300032004 Ga0307414_10197475 Ga0307414_101974751 305
185 3300037418 Ga0395900_0105637 Ga0395900_0105637_1226_2152 305
186 3300046694 Ga0495649_0000451 Ga0495649_0000451_8361_9332 305
187 3300048919 Ga0496116_0076755 Ga0496116_0076755_1052_2020 305
188 3300048928 Ga0496125_0000387 Ga0496125_0000387_26670_27638 305
189 3300053093 Ga0500651_0008807 Ga0500651_0008807_4184_5146 305
190 3300053094 Ga0500566_0047373 Ga0500566_0047373_691_1653 305
191 3300003322 rootL2_10203111 rootL2_102031112 306
192 3300006237 Ga0097621_100045563 Ga0097621_1000455632 306
193 3300009176 Ga0105242_10469723 Ga0105242_104697232 306
194 3300015684 Ga0183365_10003 Ga0183365_10003254 306
195 3300049571 Ga0501034_0213966 Ga0501034_0213966_482_1402 306
196 3300049822 Ga0501035_0035077 Ga0501035_0035077_2188_3114 306
197 3300005340 Ga0070689_100059341 Ga0070689_1000593414 307
198 3300005365 Ga0070688_100155196 Ga0070688_1001551962 307
199 3300005441 Ga0070700_100278962 Ga0070700_1002789621 307
200 3300006847 Ga0075431_100050526 Ga0075431_1000505263 307
201 3300009147 Ga0114129_10620158 Ga0114129_106201581 307
202 3300025936 Ga0207670_10010966 Ga0207670_100109663 307
203 3300025936 Ga0207670_10111575 Ga0207670_101115752 307
204 3300029957 Ga0265324_10043964 Ga0265324_100439641 307
205 3300045051 Ga0451576_0245241 Ga0451576_0245241_557_1519 307
206 3300046535 Ga0495586_0131946 Ga0495586_0131946_41_1015 307
207 3300048910 Ga0496107_0048823 Ga0496107_0048823_1306_2244 307
208 3300050511 nmdc:mga08y16_274689_c1 nmdc:mga08y16_274689_c1_455_1417 307
209 3300053122 Ga0500608_000278 Ga0500608_000278_3191_4114 307
210 iso_pu_bacteria 2941485952 2941488749 307
211 3300003320 rootH2_10116622 rootH2_101166221 308
212 3300003320 rootH2_10143379 rootH2_101433793 308
213 3300005365 Ga0070688_100189076 Ga0070688_1001890762 308
214 3300006237 Ga0097621_100321256 Ga0097621_1003212562 308
215 3300009176 Ga0105242_10006174 Ga0105242_100061742 308
216 3300025913 Ga0207695_10052239 Ga0207695_100522393 308
217 3300025934 Ga0207686_10019970 Ga0207686_100199702 308
218 3300031240 Ga0265320_10011682 Ga0265320_100116824 308
219 3300035691 Ga0373931_0126359 Ga0373931_0126359_383_1393 308
220 3300037068 Ga0373925_0138985 Ga0373925_0138985_850_1845 308
221 3300044712 Ga0453684_0008878 Ga0453684_0008878_11534_12538 308
222 3300046459 Ga0495629_0060424 Ga0495629_0060424_298_1350 308
223 3300046461 Ga0495641_0120571 Ga0495641_0120571_95_1072 308
224 3300046473 Ga0495582_0009162 Ga0495582_0009162_2162_3157 308
225 3300046517 Ga0495630_0000353 Ga0495630_0000353_26834_27829 308
226 3300046526 Ga0495666_0034343 Ga0495666_0034343_95_1090 308
227 3300046526 Ga0495666_0045944 Ga0495666_0045944_1107_2084 308
228 3300046533 Ga0495640_0056621 Ga0495640_0056621_309_1304 308
229 3300046535 Ga0495586_0000290 Ga0495586_0000290_26864_27859 308
230 3300046535 Ga0495586_0013311 Ga0495586_0013311_1821_2798 308
231 3300046559 Ga0495667_0179602 Ga0495667_0179602_121_1242 308
232 3300046642 Ga0495634_0004730 Ga0495634_0004730_6675_7652 308
233 3300046642 Ga0495634_0096670 Ga0495634_0096670_852_1847 308
234 3300046683 Ga0495658_0000596 Ga0495658_0000596_16600_17577 308
235 3300046689 Ga0495613_0006009 Ga0495613_0006009_7862_8839 308
236 3300046689 Ga0495613_0080519 Ga0495613_0080519_739_1734 308
237 3300047319 Ga0495674_0000691 Ga0495674_0000691_4033_5028 308
238 3300047321 Ga0495676_0134493 Ga0495676_0134493_537_1532 308
239 3300047471 Ga0495684_0089805 Ga0495684_0089805_943_2064 308
240 3300050514 nmdc:mga08x19_243989_c1 nmdc:mga08x19_243989_c1_48_1076 308
241 3300053077 Ga0495601_0093769 Ga0495601_0093769_753_1874 308
242 3300053080 Ga0500635_0019705 Ga0500635_0019705_519_1475 308

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

28

169

0.96

PF13732

DUF4162

Domain of unknown function (DUF4162)

297

363

0.9

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

71

199

0.65

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9372 5 216
5x41-assembly1.cif.gz_B 3.5a resolution structure of a cobalt energy-coupling factor transporter using lcp method-cbimqo 0.9258 5 221
5x41-assembly2.cif.gz_D 3.5a resolution structure of a cobalt energy-coupling factor transporter using lcp method-cbimqo 0.9255 5 224
4p33-assembly1.cif.gz_A crystal structure of e. coli lptb-e163q in complex with atp-sodium 0.9231 7 220
7ahd-assembly1.cif.gz_D opua (e190q) occluded 0.9216 6 219
ID Description Score Start End Superfamily
af_Q58429_1_224_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9741 5 219 3.40.50.300
af_Q2FVS3_1_233_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9698 6 222 3.40.50.300
af_P36879_1_236_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9602 5 219 3.40.50.300
af_Q9VDR4_479_718_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9599 5 221 3.40.50.300
af_P9WQL9_1_244_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9527 1 219 3.40.50.300
ID Description Score Start End GO Terms
AF-X1DWV4-F1-model_v4 ABC transporter domain-containing protein 0.9656 4 165 GO:0005524
GO:0016887
AF-A0A6G2UJN6-F1-model_v4 ATP-binding cassette domain-containing protein 0.9577 3 193 GO:0005524
GO:0016887
GO:0046677
AF-A0A520NVZ7-F1-model_v4 ABC transporter ATP-binding protein 0.9573 3 220 GO:0005524
GO:0016887
AF-A0A060ZSW7-F1-model_v4 ABC transporter domain-containing protein 0.9559 5 181 GO:0005524
GO:0016020
GO:0016887
GO:0033700
GO:0043231
GO:0090554
GO:0090556
GO:0140359
AF-A0A2U3CB58-F1-model_v4 ABC transporter domain-containing protein 0.9557 3 221 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
92.72 0.86 High
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Predicted Structure (AlphaFold2)

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