F354879

General Info

Members Datasets Scaffolds Average Seq Length
242 181 484 227

Family's Representative Sequence

Representative Sequence 3300038443|Ga0395901_0442364|Ga0395901_0442364_344_1114
Length 256
Sequence MPEALTPAAETSRGPTPAGAQAPARPYVVLSCGMSIDGYLDAPSPQRLLLSNDADFDRVDAERAASDAILVGAGTIRHDDPRLLVRSASRRAERVAHGLPASPTKVTLTRCADLDPGARFFADDGAEKLVYCTSPVAEGARSRIGHRATVVDAGNSCDLHGVWADLAARGVRRLMVEGGGTVHTQVLAADLADELQLVVAPFFVGSSRATRFVGDAAFPFNPQRRAELAEVRQIGDVVLLRYGLSSRPDPARTEAP

Samples

Sample ID Description Type Environment
1 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
102 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
103 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
107 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
113 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
118 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
119 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
120 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
121 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
122 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
123 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
124 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
127 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
128 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
129 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
130 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
131 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
137 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
144 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
147 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
148 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
149 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
162 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
163 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
166 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
167 2517572101 Frankia sp. DC12 Isolate Nodule
168 2643221546 Microbacterium sp. Root53 Isolate Unclassified
169 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
170 2643221576 Nocardioides sp. Root614 Isolate Unclassified
171 2643221590 Nocardioides sp. Root682 Isolate Unclassified
172 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
173 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
174 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
175 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
176 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
177 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
178 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
179 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
180 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
181 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.15
Metatranscriptomes 1.65
Isolates 6.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.65
Nodule 1.24
Rhizoplane 12.4
Rhizosphere 75.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395901_0442364 3300038443 Bacteria 1330
2 JGI24744J21845_10003432 3300002077 Bacteria 3257
3 Ga0070658_10008805 3300005327 Bacteria 8111
4 Ga0070658_10189787 3300005327 Bacteria 1732
5 Ga0070683_100000848 3300005329 Bacteria 22649
6 Ga0070683_100141236 3300005329 Bacteria 2282
7 Ga0070682_100022018 3300005337 Bacteria 3769
8 Ga0070682_100337136 3300005337 Bacteria 1119
9 Ga0070660_100015890 3300005339 Bacteria 5449
10 Ga0070691_10011357 3300005341 Bacteria 4066
11 Ga0070692_10027478 3300005345 Bacteria 2821
12 Ga0070675_100088980 3300005354 Bacteria 2584
13 Ga0070674_100021274 3300005356 Bacteria 4159
14 Ga0070659_100027841 3300005366 Bacteria 4358
15 Ga0070659_100046862 3300005366 Bacteria 3389
16 Ga0070667_100014516 3300005367 Bacteria 6510
17 Ga0070714_100011671 3300005435 Bacteria 6976
18 Ga0070701_10018797 3300005438 Bacteria 3253
19 Ga0070700_100070819 3300005441 Bacteria 2224
20 Ga0070700_100235424 3300005441 Bacteria 1305
21 Ga0070681_10675243 3300005458 Bacteria 948
22 Ga0068867_100410199 3300005459 Bacteria 1145
23 Ga0070679_100052157 3300005530 Bacteria 4075
24 Ga0070679_100145559 3300005530 Bacteria 2347
25 Ga0070684_100006215 3300005535 Bacteria 9218
26 Ga0070684_100023566 3300005535 Bacteria 5152
27 Ga0068853_100142928 3300005539 Bacteria 2149
28 Ga0068853_100714757 3300005539 Bacteria 956
29 Ga0070672_100218661 3300005543 Bacteria 1597
30 Ga0070686_100020288 3300005544 Bacteria 3930
31 Ga0070686_100278788 3300005544 Bacteria 1232
32 Ga0070693_100164179 3300005547 Bacteria 1417
33 Ga0070693_100341588 3300005547 Bacteria 1022
34 Ga0068855_100144435 3300005563 Bacteria 2710
35 Ga0068855_100319918 3300005563 Bacteria 1715
36 Ga0068857_100001896 3300005577 Bacteria 16857
37 Ga0070702_100002175 3300005615 Bacteria 8349
38 Ga0068852_100173382 3300005616 Bacteria 2023
39 Ga0068864_100366694 3300005618 Bacteria 1362
40 Ga0068861_100187444 3300005719 Bacteria 1726
41 Ga0068870_10006020 3300005840 Bacteria 5328
42 Ga0068858_100018231 3300005842 Bacteria 6573
43 Ga0068862_100154109 3300005844 Bacteria 2047
44 Ga0081455_10295135 3300005937 Bacteria 1165
45 Ga0081540_1012241 3300005983 Bacteria 5671
46 Ga0081539_10011516 3300005985 Bacteria 6981
47 Ga0070717_10009352 3300006028 Bacteria 7361
48 Ga0075365_10085536 3300006038 Bacteria 2142
49 Ga0068865_100129478 3300006881 Bacteria 1889
50 Ga0111539_10381257 3300009094 Bacteria 1641
51 Ga0105245_10002483 3300009098 Bacteria 16665
52 Ga0105245_10056316 3300009098 Bacteria 3533
53 Ga0105245_10796463 3300009098 Bacteria 983
54 Ga0114129_11533171 3300009147 Bacteria 818
55 Ga0105243_10002861 3300009148 Bacteria 14307
56 Ga0105243_10235614 3300009148 Bacteria 1626
57 Ga0105241_10420259 3300009174 Bacteria 1176
58 Ga0105242_10041044 3300009176 Bacteria 3730
59 Ga0105242_10915513 3300009176 Bacteria 878
60 Ga0105248_10447945 3300009177 Bacteria 1455
61 Ga0105238_10588433 3300009551 Bacteria 1120
62 Ga0105249_10509839 3300009553 Bacteria 1249
63 Ga0105239_10043639 3300010375 Bacteria 4916
64 Ga0105246_10035871 3300011119 Bacteria 3318
65 Ga0157371_10154628 3300013102 Bacteria 1636
66 Ga0157369_10103537 3300013105 Bacteria 3032
67 Ga0157369_10146830 3300013105 Bacteria 2494
68 Ga0157369_10199057 3300013105 Bacteria 2103
69 Ga0163162_11156815 3300013306 Bacteria 877
70 Ga0157372_10001830 3300013307 Bacteria 23038
71 Ga0157372_10528035 3300013307 Bacteria 1376
72 Ga0157375_10108881 3300013308 Bacteria 2866
73 Ga0157375_10114675 3300013308 Bacteria 2797
74 Ga0157375_10976575 3300013308 Bacteria 988
75 Ga0157375_11436665 3300013308 Bacteria 813
76 Ga0163163_10048385 3300014325 Bacteria 4181
77 Ga0157380_10031232 3300014326 Bacteria 4088
78 Ga0157380_10047848 3300014326 Bacteria 3365
79 Ga0157379_10009805 3300014968 Bacteria 8346
80 Ga0206354_11179121 3300020081 Bacteria 1200
81 Ga0206353_10057462 3300020082 Bacteria 1335
82 Ga0206353_10439293 3300020082 Bacteria 1654
83 Ga0206353_10846855 3300020082 Bacteria 3042
84 Ga0213876_10118847 3300021384 Bacteria 1403
85 Ga0207697_10020943 3300025315 Bacteria 2677
86 Ga0207688_10003336 3300025901 Bacteria 8774
87 Ga0207688_10027416 3300025901 Bacteria 3134
88 Ga0207647_10055470 3300025904 Bacteria 2435
89 Ga0207643_10006169 3300025908 Bacteria 6413
90 Ga0207705_10069810 3300025909 Bacteria 2545
91 Ga0207707_10233805 3300025912 Bacteria 1599
92 Ga0207660_10225433 3300025917 Bacteria 1472
93 Ga0207657_10026713 3300025919 Bacteria 5299
94 Ga0207657_10194346 3300025919 Bacteria 1635
95 Ga0207650_10181197 3300025925 Bacteria 1679
96 Ga0207687_10002951 3300025927 Bacteria 11540
97 Ga0207687_10256822 3300025927 Bacteria 1392
98 Ga0207664_10018186 3300025929 Bacteria 5166
99 Ga0207690_10050357 3300025932 Bacteria 2780
100 Ga0207706_10163619 3300025933 Bacteria 1955
101 Ga0207686_10098904 3300025934 Bacteria 1944
102 Ga0207709_10032502 3300025935 Bacteria 3056
103 Ga0207704_10028898 3300025938 Bacteria 3083
104 Ga0207691_10000744 3300025940 Bacteria 32135
105 Ga0207689_10613798 3300025942 Bacteria 915
106 Ga0207661_10018847 3300025944 Bacteria 5134
107 Ga0207661_10116718 3300025944 Bacteria 2266
108 Ga0207667_10119752 3300025949 Bacteria 2713
109 Ga0207651_10132803 3300025960 Bacteria 1909
110 Ga0207712_10474467 3300025961 Bacteria 1065
111 Ga0207668_10168613 3300025972 Bacteria 1715
112 Ga0207640_10037504 3300025981 Bacteria 3050
113 Ga0207658_10101730 3300025986 Bacteria 2252
114 Ga0207677_10030353 3300026023 Bacteria 3449
115 Ga0207703_10034390 3300026035 Bacteria 4021
116 Ga0207639_10216073 3300026041 Bacteria 1653
117 Ga0207639_10738564 3300026041 Bacteria 915
118 Ga0207708_10000171 3300026075 Bacteria 51434
119 Ga0207708_10011645 3300026075 Bacteria 6555
120 Ga0207702_10491994 3300026078 Bacteria 1195
121 Ga0207641_10073766 3300026088 Bacteria 2942
122 Ga0207648_10004024 3300026089 Bacteria 15259
123 Ga0207648_10405701 3300026089 Bacteria 1236
124 Ga0207676_10307222 3300026095 Bacteria 1450
125 Ga0207674_10004357 3300026116 Bacteria 17072
126 Ga0207675_100055233 3300026118 Bacteria 3705
127 Ga0207698_10253033 3300026142 Bacteria 1613
128 Ga0268265_10043232 3300028380 Bacteria 3348
129 Ga0268265_10293883 3300028380 Bacteria 1460
130 Ga0268264_10068117 3300028381 Bacteria 3006
131 Ga0268264_10342085 3300028381 Bacteria 1421
132 Ga0265336_10002444 3300028666 Bacteria 7666
133 Ga0307515_10033517 3300028794 Bacteria 8448
134 Ga0265338_10001163 3300028800 Bacteria 43486
135 Ga0307512_10003576 3300030522 Bacteria 17848
136 Ga0307516_10156723 3300031730 Bacteria 2031
137 Ga0307405_10611188 3300031731 Bacteria 891
138 Ga0307405_10884657 3300031731 Bacteria 754
139 Ga0307413_10106500 3300031824 Bacteria 1866
140 Ga0307413_10833749 3300031824 Bacteria 778
141 Ga0307410_10278823 3300031852 Bacteria 1311
142 Ga0326468_10000119 3300031889 Bacteria 7293
143 Ga0307406_10053393 3300031901 Bacteria 2574
144 Ga0307406_10120749 3300031901 Bacteria 1821
145 Ga0307409_100193939 3300031995 Bacteria 1811
146 Ga0307409_100319659 3300031995 Bacteria 1452
147 Ga0307416_100371110 3300032002 Bacteria 1457
148 Ga0307415_100100315 3300032126 Bacteria 2121
149 Ga0307415_100148984 3300032126 Bacteria 1798
150 Ga0373951_0000017 3300035091 Bacteria 65961
151 Ga0373932_0019656 3300035112 Bacteria 1763
152 Ga0395898_0348891 3300037466 Bacteria 1411
153 Ga0436364_0777713 3300037853 Bacteria 6887
154 Ga0395901_0185269 3300038443 Bacteria 2183
155 Ga0436365_1208144 3300039437 Bacteria 1678
156 Ga0439465_0025734 3300041413 Bacteria 1858
157 Ga0466965_0077684 3300044683 Bacteria 1676
158 Ga0466966_0358080 3300044684 Bacteria 877
159 Ga0466963_0023643 3300044694 Bacteria 3905
160 Ga0466963_0057980 3300044694 Bacteria 2580
161 Ga0466971_0123090 3300044719 Bacteria 1201
162 Ga0466968_0073509 3300044735 Bacteria 1492
163 Ga0466957_0112899 3300044842 Bacteria 1725
164 Ga0466960_0027078 3300044901 Bacteria 2611
165 Ga0466959_0027067 3300045049 Bacteria 4253
166 Ga0466959_0201406 3300045049 Bacteria 1386
167 Ga0466959_0285320 3300045049 Bacteria 1132
168 Ga0466958_0001930 3300045836 Bacteria 10160
169 Ga0466967_0030179 3300045976 Bacteria 4547
170 Ga0466967_0662019 3300045976 Bacteria 1033
171 Ga0466967_0725430 3300045976 Bacteria 985
172 Ga0495664_0113734 3300046477 Bacteria 1635
173 Ga0495631_0229129 3300046518 Bacteria 793
174 Ga0496100_0469338 3300048903 Bacteria 967
175 Ga0496101_0101931 3300048904 Bacteria 2150
176 Ga0496102_0018305 3300048905 Bacteria 6154
177 Ga0496102_0021937 3300048905 Bacteria 5654
178 Ga0496102_0148391 3300048905 Bacteria 2202
179 Ga0496103_0123362 3300048906 Bacteria 1651
180 Ga0496104_0076537 3300048907 Bacteria 3187
181 Ga0496104_0792558 3300048907 Bacteria 854
182 Ga0496106_0598754 3300048909 Bacteria 883
183 Ga0496107_0020787 3300048910 Bacteria 4638
184 Ga0496107_0158048 3300048910 Bacteria 1679
185 Ga0496108_0089958 3300048911 Bacteria 2609
186 Ga0496108_0284852 3300048911 Bacteria 1438
187 Ga0496108_0285503 3300048911 Bacteria 1437
188 Ga0496109_0011987 3300048912 Bacteria 7466
189 Ga0496109_0075120 3300048912 Bacteria 3107
190 Ga0496109_0092776 3300048912 Bacteria 2793
191 Ga0496109_0222244 3300048912 Bacteria 1776
192 Ga0496109_0267536 3300048912 Bacteria 1610
193 Ga0496110_0001755 3300048913 Bacteria 15993
194 Ga0496110_0186772 3300048913 Bacteria 1882
195 Ga0496110_0199944 3300048913 Bacteria 1816
196 Ga0496110_0489052 3300048913 Bacteria 1121
197 Ga0496112_0895938 3300048915 Bacteria 809
198 Ga0496113_0095692 3300048916 Bacteria 2295
199 Ga0496113_0113133 3300048916 Bacteria 2115
200 Ga0496113_0487556 3300048916 Bacteria 990
201 Ga0496114_0803226 3300048917 Bacteria 820
202 Ga0496114_0874223 3300048917 Bacteria 779
203 Ga0496115_0111492 3300048918 Bacteria 2248
204 Ga0496116_0000482 3300048919 Bacteria 54850
205 Ga0496117_0013025 3300048920 Bacteria 7283
206 Ga0496118_0001763 3300048921 Bacteria 31315
207 Ga0496119_0003907 3300048922 Bacteria 15157
208 Ga0496119_0072124 3300048922 Bacteria 2019
209 Ga0496120_0097188 3300048923 Bacteria 1563
210 Ga0501032_0098680 3300049569 Bacteria 1935
211 Ga0501033_0302841 3300049570 Bacteria 1125
212 Ga0501036_0065837 3300049572 Bacteria 3066
213 Ga0501037_0028904 3300049573 Bacteria 4096
214 Ga0501038_0318753 3300049574 Bacteria 1217
215 Ga0501040_0384329 3300049576 Bacteria 1007
216 Ga0501042_0271801 3300049578 Bacteria 1224
217 Ga0501043_0074635 3300049579 Bacteria 2664
218 Ga0501071_0378601 3300049587 Bacteria 1079
219 Ga0501079_0393824 3300049741 Bacteria 1086
220 Ga0501035_0004214 3300049822 Bacteria 13666
221 Ga0501044_0014143 3300049823 Bacteria 8616
222 Ga0501045_0150613 3300049824 Bacteria 1731
223 nmdc:mga00v17_188044_c1 3300050491 Bacteria 1333
224 nmdc:mga0yw44_311915_c1 3300050492 Bacteria 1055
225 nmdc:mga08y16_319174_c1 3300050511 Bacteria 1599
226 Ga0500641_0231802 3300053096 Bacteria 780
227 Ga0466962_0048369 3300061719 Bacteria 2032
228 2517761525 2517572101 Bacteria 6884336
229 2643752150 2643221546 Bacteria 2910897
230 2643850079 2643221567 Bacteria 4163945
231 2643892038 2643221576 Bacteria 5214352
232 2643961090 2643221590 Bacteria 5214697
233 2644136081 2643221624 Bacteria 4384879
234 2676200666 2675902999 Bacteria 9438463
235 2774845244 2773857921 Bacteria 9435764
236 2808873959 2808606365 Bacteria 4301966
237 2812324582 2811994872 Bacteria 4121241
238 2812331499 2811994874 Bacteria 5367947
239 2812375329 2811994882 Bacteria 4688362
240 2816504555 2816332139 Bacteria 9138787
241 2833709710 2833709550 Bacteria 4008291
242 3003006150 3002998708 Bacteria 11715108
243 Ga0395901_0442364
244 JGI24744J21845_10003432
245 Ga0070658_10008805
246 Ga0070658_10189787
247 Ga0070683_100000848
248 Ga0070683_100141236
249 Ga0070682_100022018
250 Ga0070682_100337136
251 Ga0070660_100015890
252 Ga0070691_10011357
253 Ga0070692_10027478
254 Ga0070675_100088980
255 Ga0070674_100021274
256 Ga0070659_100027841
257 Ga0070659_100046862
258 Ga0070667_100014516
259 Ga0070714_100011671
260 Ga0070701_10018797
261 Ga0070700_100070819
262 Ga0070700_100235424
263 Ga0070681_10675243
264 Ga0068867_100410199
265 Ga0070679_100052157
266 Ga0070679_100145559
267 Ga0070684_100006215
268 Ga0070684_100023566
269 Ga0068853_100142928
270 Ga0068853_100714757
271 Ga0070672_100218661
272 Ga0070686_100020288
273 Ga0070686_100278788
274 Ga0070693_100164179
275 Ga0070693_100341588
276 Ga0068855_100144435
277 Ga0068855_100319918
278 Ga0068857_100001896
279 Ga0070702_100002175
280 Ga0068852_100173382
281 Ga0068864_100366694
282 Ga0068861_100187444
283 Ga0068870_10006020
284 Ga0068858_100018231
285 Ga0068862_100154109
286 Ga0081455_10295135
287 Ga0081540_1012241
288 Ga0081539_10011516
289 Ga0070717_10009352
290 Ga0075365_10085536
291 Ga0068865_100129478
292 Ga0111539_10381257
293 Ga0105245_10002483
294 Ga0105245_10056316
295 Ga0105245_10796463
296 Ga0114129_11533171
297 Ga0105243_10002861
298 Ga0105243_10235614
299 Ga0105241_10420259
300 Ga0105242_10041044
301 Ga0105242_10915513
302 Ga0105248_10447945
303 Ga0105238_10588433
304 Ga0105249_10509839
305 Ga0105239_10043639
306 Ga0105246_10035871
307 Ga0157371_10154628
308 Ga0157369_10103537
309 Ga0157369_10146830
310 Ga0157369_10199057
311 Ga0163162_11156815
312 Ga0157372_10001830
313 Ga0157372_10528035
314 Ga0157375_10108881
315 Ga0157375_10114675
316 Ga0157375_10976575
317 Ga0157375_11436665
318 Ga0163163_10048385
319 Ga0157380_10031232
320 Ga0157380_10047848
321 Ga0157379_10009805
322 Ga0206354_11179121
323 Ga0206353_10057462
324 Ga0206353_10439293
325 Ga0206353_10846855
326 Ga0213876_10118847
327 Ga0207697_10020943
328 Ga0207688_10003336
329 Ga0207688_10027416
330 Ga0207647_10055470
331 Ga0207643_10006169
332 Ga0207705_10069810
333 Ga0207707_10233805
334 Ga0207660_10225433
335 Ga0207657_10026713
336 Ga0207657_10194346
337 Ga0207650_10181197
338 Ga0207687_10002951
339 Ga0207687_10256822
340 Ga0207664_10018186
341 Ga0207690_10050357
342 Ga0207706_10163619
343 Ga0207686_10098904
344 Ga0207709_10032502
345 Ga0207704_10028898
346 Ga0207691_10000744
347 Ga0207689_10613798
348 Ga0207661_10018847
349 Ga0207661_10116718
350 Ga0207667_10119752
351 Ga0207651_10132803
352 Ga0207712_10474467
353 Ga0207668_10168613
354 Ga0207640_10037504
355 Ga0207658_10101730
356 Ga0207677_10030353
357 Ga0207703_10034390
358 Ga0207639_10216073
359 Ga0207639_10738564
360 Ga0207708_10000171
361 Ga0207708_10011645
362 Ga0207702_10491994
363 Ga0207641_10073766
364 Ga0207648_10004024
365 Ga0207648_10405701
366 Ga0207676_10307222
367 Ga0207674_10004357
368 Ga0207675_100055233
369 Ga0207698_10253033
370 Ga0268265_10043232
371 Ga0268265_10293883
372 Ga0268264_10068117
373 Ga0268264_10342085
374 Ga0265336_10002444
375 Ga0307515_10033517
376 Ga0265338_10001163
377 Ga0307512_10003576
378 Ga0307516_10156723
379 Ga0307405_10611188
380 Ga0307405_10884657
381 Ga0307413_10106500
382 Ga0307413_10833749
383 Ga0307410_10278823
384 Ga0326468_10000119
385 Ga0307406_10053393
386 Ga0307406_10120749
387 Ga0307409_100193939
388 Ga0307409_100319659
389 Ga0307416_100371110
390 Ga0307415_100100315
391 Ga0307415_100148984
392 Ga0373951_0000017
393 Ga0373932_0019656
394 Ga0395898_0348891
395 Ga0436364_0777713
396 Ga0395901_0185269
397 Ga0436365_1208144
398 Ga0439465_0025734
399 Ga0466965_0077684
400 Ga0466966_0358080
401 Ga0466963_0023643
402 Ga0466963_0057980
403 Ga0466971_0123090
404 Ga0466968_0073509
405 Ga0466957_0112899
406 Ga0466960_0027078
407 Ga0466959_0027067
408 Ga0466959_0201406
409 Ga0466959_0285320
410 Ga0466958_0001930
411 Ga0466967_0030179
412 Ga0466967_0662019
413 Ga0466967_0725430
414 Ga0495664_0113734
415 Ga0495631_0229129
416 Ga0496100_0469338
417 Ga0496101_0101931
418 Ga0496102_0018305
419 Ga0496102_0021937
420 Ga0496102_0148391
421 Ga0496103_0123362
422 Ga0496104_0076537
423 Ga0496104_0792558
424 Ga0496106_0598754
425 Ga0496107_0020787
426 Ga0496107_0158048
427 Ga0496108_0089958
428 Ga0496108_0284852
429 Ga0496108_0285503
430 Ga0496109_0011987
431 Ga0496109_0075120
432 Ga0496109_0092776
433 Ga0496109_0222244
434 Ga0496109_0267536
435 Ga0496110_0001755
436 Ga0496110_0186772
437 Ga0496110_0199944
438 Ga0496110_0489052
439 Ga0496112_0895938
440 Ga0496113_0095692
441 Ga0496113_0113133
442 Ga0496113_0487556
443 Ga0496114_0803226
444 Ga0496114_0874223
445 Ga0496115_0111492
446 Ga0496116_0000482
447 Ga0496117_0013025
448 Ga0496118_0001763
449 Ga0496119_0003907
450 Ga0496119_0072124
451 Ga0496120_0097188
452 Ga0501032_0098680
453 Ga0501033_0302841
454 Ga0501036_0065837
455 Ga0501037_0028904
456 Ga0501038_0318753
457 Ga0501040_0384329
458 Ga0501042_0271801
459 Ga0501043_0074635
460 Ga0501071_0378601
461 Ga0501079_0393824
462 Ga0501035_0004214
463 Ga0501044_0014143
464 Ga0501045_0150613
465 nmdc:mga00v17_188044_c1
466 nmdc:mga0yw44_311915_c1
467 nmdc:mga08y16_319174_c1
468 Ga0500641_0231802
469 Ga0466962_0048369
470 2517761525
471 2643752150
472 2643850079
473 2643892038
474 2643961090
475 2644136081
476 2676200666
477 2774845244
478 2808873959
479 2812324582
480 2812331499
481 2812375329
482 2816504555
483 2833709710
484 3003006150

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

26

240

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5xv5-assembly1.cif.gz_B crystal structure of rib7 mutant s88e from methanosarcina mazei 0.9336 4 222
5xv0-assembly1.cif.gz_A crystal structure of rib7 mutant d33n from methanosarcina mazei 0.9309 1 222
5xv2-assembly1.cif.gz_A-2 crystal structure of rib7 mutant d33a from methanosarcina mazei 0.9307 4 222
5xux-assembly3.cif.gz_F crystal structure of rib7 from methanosarcina mazei 0.9301 1 222
5xux-assembly2.cif.gz_C crystal structure of rib7 from methanosarcina mazei 0.9294 4 222
ID Description Score Start End Superfamily
5xuxB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.9338 4 222 3.40.430.10
5xuxB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.9097 4 222 3.40.430.10
2b3zA02 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.9023 4 222 3.40.430.10
af_Q9STY4_178_394_3.40.430.10 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8977 3 221 3.40.430.10
af_Q2FXF9_123_334_3.40.430.10 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8901 2 222 3.40.430.10
ID Description Score Start End GO Terms
AF-A0A4R4KX39-F1-model_v4 Deaminase 0.9888 1 226 GO:0008703
GO:0009231
AF-A0A543DYK6-F1-model_v4 5-amino-6-(5-phosphoribosylamino)uracil reductase 0.9874 1 223 GO:0008703
GO:0009231
AF-A0A0Q9QFU6-F1-model_v4 Deaminase 0.987 1 227 GO:0008703
GO:0009231
AF-A0A7Y9GMP1-F1-model_v4 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) 0.983 1 226 GO:0008703
GO:0009231
AF-A0A6G9YUH6-F1-model_v4 Deaminase 0.9823 4 222 GO:0008703
GO:0009231

Map