F354752

General Info

Members Datasets Scaffolds Average Seq Length
242 140 241 400

Family's Representative Sequence

Representative Sequence 3300025942|Ga0207689_10144297|Ga0207689_101442972
Length 430
Sequence VQTFWRAPSLTAGFLSGRTGKLQKVKPISQPDSLGHWGRYGGRFVPETLMAPLEELTAAYESARADISFQTELDALLRDFAGRATPLFLAKRLTAQAGGARIYLKREDLLHTGAHKINNTLGQILLARRMGKKRIIAETGAGQHGVATATVCALFGLRCVVYMGAEDMRRQALNVFRMELMGAEVRAVDAGSRTLKDAINEALRDWVTNVADTYYLLGSALGPHPYPLMVRDFQSVIGREARAQILEQENRLPDVLIACVGGGSNSIGLFHPFLADEAVRMIGVEAGGLGAELGRHAARFNTNGGGRPGVLQGTMSYVLQDERGQIATTHSISAGLDYPSIGPEHAFLHDEGRVAYTSVSDDEALSAFQMLSKLEGIIPALESAHAVAHALKVAGEMKSDQIMIVNLSGRGDKDVDTVRGSLTTEGLGGS

Samples

Sample ID Description Type Environment
1 2941479691
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
97 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
98 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
99 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
102 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
103 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
104 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
105 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
106 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
107 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
117 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
118 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
119 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
120 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
121 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
122 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
123 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
124 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
127 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
135 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
136 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
137 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
138 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
139 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.59
Metatranscriptomes 0
Isolates 0.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.83
Rhizosphere 93.8
Stem 0
Stem Tuber 0
Unclassified 5.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000059 3300002074 Bacteria 45110
2 JGI24034J26672_10000030 3300002239 Bacteria 97515
3 JGI25406J46586_10002740 3300003203 Bacteria 8293
4 Ga0065715_10186276 3300005293 Bacteria 1443
5 Ga0065707_10003399 3300005295 Bacteria 3926
6 Ga0065707_10008895 3300005295 Bacteria 2262
7 Ga0070690_100059696 3300005330 Bacteria 2453
8 Ga0070690_100197785 3300005330 Bacteria 1397
9 Ga0068869_100026290 3300005334 Bacteria 4050
10 Ga0068869_100050942 3300005334 Bacteria 3003
11 Ga0070689_100053220 3300005340 Bacteria 3132
12 Ga0070668_100045904 3300005347 Bacteria 3353
13 Ga0070671_100016670 3300005355 Bacteria 5941
14 Ga0070703_10000162 3300005406 Bacteria 33577
15 Ga0070701_10052905 3300005438 Bacteria 2111
16 Ga0070705_100011303 3300005440 Bacteria 4498
17 Ga0070705_100047915 3300005440 Bacteria 2472
18 Ga0070705_100054170 3300005440 Bacteria 2352
19 Ga0070694_100051386 3300005444 Bacteria 2782
20 Ga0070694_100066633 3300005444 Bacteria 2470
21 Ga0070706_100068631 3300005467 Bacteria 3278
22 Ga0070706_100140031 3300005467 Bacteria 2258
23 Ga0070707_100000369 3300005468 Bacteria 44505
24 Ga0070707_100006796 3300005468 Bacteria 10590
25 Ga0070698_100002354 3300005471 Bacteria 20883
26 Ga0070698_100003679 3300005471 Bacteria 16836
27 Ga0070699_100077656 3300005518 Bacteria 2891
28 Ga0070679_100162681 3300005530 Bacteria 2206
29 Ga0070697_100000163 3300005536 Bacteria 54349
30 Ga0070697_100060987 3300005536 Bacteria 3075
31 Ga0070697_100160492 3300005536 Bacteria 1899
32 Ga0068853_100095118 3300005539 Bacteria 2626
33 Ga0070672_100031541 3300005543 Bacteria 3990
34 Ga0070686_100020094 3300005544 Bacteria 3949
35 Ga0070686_100041255 3300005544 Bacteria 2884
36 Ga0070686_100062037 3300005544 Bacteria 2417
37 Ga0070696_100028483 3300005546 Bacteria 3812
38 Ga0070696_100081572 3300005546 Bacteria 2292
39 Ga0070704_100013988 3300005549 Bacteria 5000
40 Ga0070704_100151277 3300005549 Bacteria 1825
41 Ga0068859_100004634 3300005617 Bacteria 14004
42 Ga0068864_100148566 3300005618 Bacteria 2121
43 Ga0068861_100027555 3300005719 Bacteria 4140
44 Ga0068861_100317590 3300005719 Bacteria 1355
45 Ga0068863_100027825 3300005841 Bacteria 5396
46 Ga0068863_100211498 3300005841 Bacteria 1868
47 Ga0068858_100000550 3300005842 Bacteria 39088
48 Ga0068860_100116804 3300005843 Bacteria 2553
49 Ga0081455_10002396 3300005937 Bacteria 22378
50 Ga0081455_10004372 3300005937 Bacteria 15913
51 Ga0081539_10000976 3300005985 Bacteria 53364
52 Ga0081539_10001334 3300005985 Bacteria 42972
53 Ga0081539_10005715 3300005985 Bacteria 12441
54 Ga0070716_100051537 3300006173 Bacteria 2340
55 Ga0070712_100003218 3300006175 Bacteria 10062
56 Ga0075428_100007116 3300006844 Bacteria 12389
57 Ga0075428_100223789 3300006844 Bacteria 2032
58 Ga0075431_100026482 3300006847 Bacteria 5949
59 Ga0075431_100089628 3300006847 Bacteria 3175
60 Ga0075433_10023575 3300006852 Bacteria 5182
61 Ga0075433_10191432 3300006852 Bacteria 1820
62 Ga0075434_100011682 3300006871 Bacteria 8294
63 Ga0075434_100026196 3300006871 Bacteria 5711
64 Ga0075434_100036017 3300006871 Bacteria 4893
65 Ga0075434_100073680 3300006871 Bacteria 3407
66 Ga0075434_100085095 3300006871 Bacteria 3161
67 Ga0075434_100391274 3300006871 Bacteria 1411
68 Ga0075436_100000014 3300006914 Bacteria 175616
69 Ga0097620_100004634 3300006931 Bacteria 14004
70 Ga0075435_100023966 3300007076 Bacteria 4729
71 Ga0099794_10004024 3300007265 Bacteria 5713
72 Ga0105240_10248034 3300009093 Bacteria 2061
73 Ga0111539_10287758 3300009094 Bacteria 1912
74 Ga0105247_10000153 3300009101 Bacteria 67393
75 Ga0114129_10000500 3300009147 Bacteria 47663
76 Ga0114129_10015302 3300009147 Bacteria 10917
77 Ga0105243_10001431 3300009148 Bacteria 21022
78 Ga0105243_10001911 3300009148 Bacteria 17773
79 Ga0105241_10130005 3300009174 Bacteria 2037
80 Ga0105242_10000121 3300009176 Bacteria 57323
81 Ga0105249_10000369 3300009553 Bacteria 44503
82 Ga0105249_10030863 3300009553 Bacteria 4845
83 Ga0105249_10133962 3300009553 Bacteria 2369
84 Ga0105239_10077808 3300010375 Bacteria 3650
85 Ga0157378_10000002 3300013297 Bacteria 222652
86 Ga0157378_10017207 3300013297 Bacteria 6338
87 Ga0157378_10180029 3300013297 Bacteria 1988
88 Ga0163162_10000019 3300013306 Bacteria 220603
89 Ga0163162_10042768 3300013306 Bacteria 4535
90 Ga0163162_10168832 3300013306 Bacteria 2312
91 Ga0157372_10524289 3300013307 Bacteria 1381
92 Ga0163163_10139129 3300014325 Bacteria 2470
93 Ga0157380_10011596 3300014326 Bacteria 6372
94 Ga0163161_10068522 3300017792 Bacteria 2593
95 Ga0213876_10000216 3300021384 Bacteria 58015
96 Ga0213876_10013977 3300021384 Bacteria 4254
97 Ga0207653_10000027 3300025885 Bacteria 113830
98 Ga0207710_10000001 3300025900 Bacteria 1797433
99 Ga0207643_10098688 3300025908 Bacteria 1710
100 Ga0207707_10003765 3300025912 Bacteria 13441
101 Ga0207693_10014932 3300025915 Bacteria 6237
102 Ga0207652_10119711 3300025921 Bacteria 2342
103 Ga0207646_10000526 3300025922 Bacteria 51002
104 Ga0207646_10025915 3300025922 Bacteria 5360
105 Ga0207650_10013254 3300025925 Bacteria 5704
106 Ga0207687_10131219 3300025927 Bacteria 1889
107 Ga0207644_10000150 3300025931 Bacteria 50157
108 Ga0207686_10000017 3300025934 Bacteria 195143
109 Ga0207709_10000024 3300025935 Bacteria 369177
110 Ga0207709_10009646 3300025935 Bacteria 5317
111 Ga0207670_10028702 3300025936 Bacteria 3537
112 Ga0207665_10069379 3300025939 Bacteria 2403
113 Ga0207691_10063113 3300025940 Bacteria 3361
114 Ga0207689_10011710 3300025942 Bacteria 7515
115 Ga0207689_10068391 3300025942 Bacteria 2919
116 Ga0207689_10144297 3300025942 Bacteria 1961
117 Ga0207689_10236552 3300025942 Bacteria 1510
118 Ga0207712_10002100 3300025961 Bacteria 13049
119 Ga0207668_10003574 3300025972 Bacteria 9133
120 Ga0207640_10083961 3300025981 Bacteria 2185
121 Ga0207677_10065895 3300026023 Bacteria 2529
122 Ga0207703_10000347 3300026035 Bacteria 49743
123 Ga0207708_10011924 3300026075 Bacteria 6475
124 Ga0207708_10084957 3300026075 Bacteria 2434
125 Ga0207675_100018378 3300026118 Bacteria 6519
126 Ga0207675_100183361 3300026118 Bacteria 2005
127 Ga0207675_100421005 3300026118 Bacteria 1319
128 Ga0209588_1019815 3300027671 Bacteria 2103
129 Ga0207428_10065617 3300027907 Bacteria 2863
130 Ga0268265_10031200 3300028380 Bacteria 3847
131 Ga0268265_10160568 3300028380 Bacteria 1908
132 Ga0265330_10015505 3300031235 Bacteria 3524
133 Ga0307513_10002983 3300031456 Bacteria 23062
134 Ga0395900_0017710 3300037418 Bacteria 7272
135 Ga0395898_0012348 3300037466 Bacteria 8834
136 Ga0395905_0007654 3300037471 Bacteria 10723
137 Ga0395905_0025159 3300037471 Bacteria 5615
138 Ga0395901_0002844 3300038443 Bacteria 17473
139 Ga0436365_0067166 3300039437 Bacteria 157821
140 Ga0436365_1517312 3300039437 Bacteria 7507
141 Ga0436360_0767389 3300039438 Bacteria 1689
142 Ga0436361_1153064 3300039447 Bacteria 3250
143 Ga0436363_0410724 3300039450 Bacteria 5395
144 Ga0451576_0016925 3300045051 Bacteria 8030
145 Ga0451576_0324331 3300045051 Bacteria 1612
146 Ga0495632_0019392 3300046519 Bacteria 3707
147 Ga0495659_0034752 3300046664 Bacteria 1774
148 Ga0496105_0178916 3300048908 Bacteria 1737
149 Ga0496106_0087559 3300048909 Bacteria 2400
150 Ga0496121_0000165 3300048924 Bacteria 145052
151 Ga0496122_0093170 3300048925 Bacteria 2044
152 Ga0496123_0003339 3300048926 Bacteria 18157
153 Ga0496124_0196260 3300048927 Bacteria 1539
154 Ga0496125_0000121 3300048928 Bacteria 174971
155 Ga0496126_0126137 3300048929 Bacteria 2215
156 Ga0501036_0000620 3300049572 Bacteria 25836
157 Ga0501036_0078234 3300049572 Bacteria 2797
158 Ga0501036_0084968 3300049572 Bacteria 2675
159 Ga0501038_0001024 3300049574 Bacteria 25191
160 Ga0501038_0024579 3300049574 Bacteria 5373
161 Ga0501039_0000144 3300049575 Bacteria 48530
162 Ga0501040_0000365 3300049576 Bacteria 26758
163 Ga0501041_0000133 3300049577 Bacteria 31805
164 Ga0501041_0047314 3300049577 Bacteria 2618
165 Ga0501042_0000373 3300049578 Bacteria 22636
166 Ga0501042_0016846 3300049578 Bacteria 5027
167 Ga0501042_0050411 3300049578 Bacteria 2969
168 Ga0501046_0001171 3300049580 Bacteria 25517
169 Ga0501046_0024676 3300049580 Bacteria 4927
170 Ga0501046_0128828 3300049580 Bacteria 1920
171 Ga0501048_0001857 3300049582 Bacteria 16034
172 Ga0501048_0026595 3300049582 Bacteria 4212
173 Ga0501048_0027258 3300049582 Bacteria 4154
174 Ga0501048_0116486 3300049582 Bacteria 1888
175 Ga0501068_0001300 3300049584 Bacteria 13232
176 Ga0501070_0135403 3300049586 Bacteria 2034
177 Ga0501071_0001631 3300049587 Bacteria 13173
178 Ga0501071_0016533 3300049587 Bacteria 5076
179 Ga0501072_0000384 3300049588 Bacteria 31645
180 Ga0501072_0009488 3300049588 Bacteria 7399
181 Ga0501072_0018289 3300049588 Bacteria 5393
182 Ga0501072_0128034 3300049588 Bacteria 2023
183 Ga0501072_0201430 3300049588 Bacteria 1587
184 Ga0501073_0264982 3300049589 Bacteria 1186
185 Ga0501074_0007131 3300049590 Bacteria 8077
186 Ga0501074_0013928 3300049590 Bacteria 5845
187 Ga0501075_0001822 3300049591 Bacteria 14041
188 Ga0501075_0018297 3300049591 Bacteria 5069
189 Ga0501075_0042105 3300049591 Bacteria 3424
190 Ga0501075_0045894 3300049591 Bacteria 3281
191 Ga0501075_0057230 3300049591 Bacteria 2935
192 Ga0501075_0079519 3300049591 Bacteria 2481
193 Ga0501076_0000436 3300049592 Bacteria 26365
194 Ga0501076_0029586 3300049592 Bacteria 4261
195 Ga0501076_0042163 3300049592 Bacteria 3593
196 Ga0501076_0424442 3300049592 Bacteria 1094
197 Ga0501077_0000383 3300049593 Bacteria 26502
198 Ga0501079_0000999 3300049741 Bacteria 19543
199 Ga0501079_0013418 3300049741 Bacteria 6248
200 Ga0501079_0014373 3300049741 Bacteria 6034
201 Ga0501079_0114112 3300049741 Bacteria 2100
202 Ga0501079_0203520 3300049741 Bacteria 1546
203 Ga0501080_0012844 3300049742 Bacteria 7683
204 Ga0501080_0013640 3300049742 Bacteria 7482
205 Ga0501080_0056209 3300049742 Bacteria 3666
206 Ga0501080_0102966 3300049742 Bacteria 2648
207 Ga0501080_0196654 3300049742 Bacteria 1852
208 Ga0501080_0368504 3300049742 Bacteria 1295
209 Ga0501081_0000627 3300049743 Bacteria 20135
210 Ga0501081_0013665 3300049743 Bacteria 5338
211 Ga0501081_0155016 3300049743 Bacteria 1647
212 Ga0501083_0114839 3300049744 Bacteria 1768
213 Ga0501045_0000405 3300049824 Bacteria 26167
214 Ga0501045_0119807 3300049824 Bacteria 1954
215 nmdc:mga05p37_128139_c1 3300050507 Bacteria 3115
216 nmdc:mga05p37_950_c1 3300050507 Bacteria 32734
217 nmdc:mga09592_11074_c1 3300050508 Bacteria 7340
218 nmdc:mga09592_20078_c1 3300050508 Bacteria 5490
219 nmdc:mga06r32_131252_c1 3300050510 Bacteria 2477
220 nmdc:mga06r32_58289_c1 3300050510 Bacteria 3711
221 nmdc:mga08y16_215822_c1 3300050511 Bacteria 1987
222 nmdc:mga0n895_17662_c1 3300050512 Bacteria 6582
223 nmdc:mga0n895_84983_c1 3300050512 Bacteria 3158
224 nmdc:mga0rr50_936_c1 3300050513 Bacteria 15780
225 nmdc:mga08x19_160147_c1 3300050514 Bacteria 1528
226 nmdc:mga0a205_168274_c1 3300050515 Bacteria 2087
227 nmdc:mga0a205_172862_c1 3300050515 Bacteria 2056
228 nmdc:mga0a205_30534_c1 3300050515 Bacteria 5160
229 nmdc:mga0a205_419458_c1 3300050515 Bacteria 1200
230 nmdc:mga0a205_7017_c1 3300050515 Bacteria 10173
231 Ga0501084_0002368 3300054114 Bacteria 15171
232 Ga0501084_0010192 3300054114 Bacteria 7771
233 Ga0501084_0032597 3300054114 Bacteria 4358
234 Ga0501084_0183647 3300054114 Bacteria 1765
235 Ga0501082_0012667 3300060353 Bacteria 7248
236 Ga0501082_0012923 3300060353 Bacteria 7177
237 Ga0501082_0211460 3300060353 Bacteria 1687
238 Ga0530510_0000374 3300061734 Bacteria 29098
239 Ga0530510_0003579 3300061734 Bacteria 10697
240 Ga0530510_0008285 3300061734 Bacteria 7246
241 Ga0530510_0065745 3300061734 Bacteria 2628

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049592 Ga0501076_0424442 Ga0501076_0424442_45_1076 342
2 3300050515 nmdc:mga0a205_172862_c1 nmdc:mga0a205_172862_c1_48_1127 353
3 3300049742 Ga0501080_0196654 Ga0501080_0196654_12_1094 359
4 3300005340 Ga0070689_100053220 Ga0070689_1000532204 367
5 3300025936 Ga0207670_10028702 Ga0207670_100287022 367
6 3300049588 Ga0501072_0201430 Ga0501072_0201430_387_1502 367
7 3300049589 Ga0501073_0264982 Ga0501073_0264982_49_1164 367
8 3300049591 Ga0501075_0057230 Ga0501075_0057230_1738_2853 367
9 3300049592 Ga0501076_0029586 Ga0501076_0029586_387_1502 367
10 3300049741 Ga0501079_0114112 Ga0501079_0114112_920_2035 367
11 3300049742 Ga0501080_0368504 Ga0501080_0368504_103_1218 367
12 3300049824 Ga0501045_0119807 Ga0501045_0119807_626_1741 367
13 3300060353 Ga0501082_0211460 Ga0501082_0211460_535_1650 367
14 3300061734 Ga0530510_0065745 Ga0530510_0065745_624_1739 367
15 3300049578 Ga0501042_0050411 Ga0501042_0050411_1784_2938 372
16 3300050510 nmdc:mga06r32_131252_c1 nmdc:mga06r32_131252_c1_1190_2344 372
17 3300061734 Ga0530510_0008285 Ga0530510_0008285_3622_4776 372
18 3300006852 Ga0075433_10191432 Ga0075433_101914322 374
19 3300050515 nmdc:mga0a205_419458_c1 nmdc:mga0a205_419458_c1_56_1180 374
20 3300025942 Ga0207689_10236552 Ga0207689_102365522 375
21 3300005467 Ga0070706_100068631 Ga0070706_1000686312 376
22 3300009147 Ga0114129_10000500 Ga0114129_1000050028 377
23 3300049590 Ga0501074_0013928 Ga0501074_0013928_2355_3596 377
24 3300050507 nmdc:mga05p37_950_c1 nmdc:mga05p37_950_c1_10353_11588 377
25 3300027671 Ga0209588_1019815 Ga0209588_10198152 378
26 3300005334 Ga0068869_100050942 Ga0068869_1000509423 379
27 3300005406 Ga0070703_10000162 Ga0070703_100001626 379
28 3300005468 Ga0070707_100000369 Ga0070707_10000036918 379
29 3300005471 Ga0070698_100002354 Ga0070698_1000023545 379
30 3300005719 Ga0068861_100317590 Ga0068861_1003175901 379
31 3300006871 Ga0075434_100036017 Ga0075434_1000360173 379
32 3300010375 Ga0105239_10077808 Ga0105239_100778082 379
33 3300013297 Ga0157378_10017207 Ga0157378_100172072 379
34 3300013306 Ga0163162_10168832 Ga0163162_101688322 379
35 3300017792 Ga0163161_10068522 Ga0163161_100685221 379
36 3300025885 Ga0207653_10000027 Ga0207653_1000002726 379
37 3300025922 Ga0207646_10000526 Ga0207646_1000052618 379
38 3300025927 Ga0207687_10131219 Ga0207687_101312192 379
39 3300025942 Ga0207689_10011710 Ga0207689_100117103 379
40 3300026023 Ga0207677_10065895 Ga0207677_100658951 379
41 3300026075 Ga0207708_10011924 Ga0207708_100119244 379
42 3300026118 Ga0207675_100018378 Ga0207675_1000183784 379
43 3300005467 Ga0070706_100140031 Ga0070706_1001400312 381
44 3300006847 Ga0075431_100089628 Ga0075431_1000896283 381
45 3300049572 Ga0501036_0078234 Ga0501036_0078234_1024_2274 383
46 3300049574 Ga0501038_0024579 Ga0501038_0024579_2793_4043 383
47 3300049578 Ga0501042_0016846 Ga0501042_0016846_456_1706 383
48 3300049580 Ga0501046_0024676 Ga0501046_0024676_1308_2558 383
49 3300049582 Ga0501048_0027258 Ga0501048_0027258_2639_3889 383
50 3300049588 Ga0501072_0009488 Ga0501072_0009488_4748_5998 383
51 3300049591 Ga0501075_0018297 Ga0501075_0018297_1634_2884 383
52 3300049592 Ga0501076_0000436 Ga0501076_0000436_12467_13717 383
53 3300049741 Ga0501079_0013418 Ga0501079_0013418_2069_3319 383
54 3300049742 Ga0501080_0012844 Ga0501080_0012844_3752_5002 383
55 3300049743 Ga0501081_0013665 Ga0501081_0013665_4057_5307 383
56 3300049744 Ga0501083_0114839 Ga0501083_0114839_479_1729 383
57 3300054114 Ga0501084_0032597 Ga0501084_0032597_480_1730 383
58 3300060353 Ga0501082_0012667 Ga0501082_0012667_3352_4602 383
59 3300061734 Ga0530510_0003579 Ga0530510_0003579_7813_9063 383
60 3300048909 Ga0496106_0087559 Ga0496106_0087559_995_2152 385
61 3300005440 Ga0070705_100011303 Ga0070705_1000113034 386
62 3300005841 Ga0068863_100027825 Ga0068863_1000278253 386
63 3300006175 Ga0070712_100003218 Ga0070712_1000032185 386
64 3300006871 Ga0075434_100011682 Ga0075434_1000116827 386
65 3300025915 Ga0207693_10014932 Ga0207693_100149324 386
66 3300028380 Ga0268265_10031200 Ga0268265_100312003 387
67 3300006871 Ga0075434_100026196 Ga0075434_1000261962 388
68 3300007076 Ga0075435_100023966 Ga0075435_1000239665 388
69 3300050512 nmdc:mga0n895_17662_c1 nmdc:mga0n895_17662_c1_4783_5949 388
70 3300005544 Ga0070686_100020094 Ga0070686_1000200944 389
71 3300006871 Ga0075434_100391274 Ga0075434_1003912742 389
72 3300025922 Ga0207646_10025915 Ga0207646_100259154 390
73 3300037471 Ga0395905_0007654 Ga0395905_0007654_595_1812 390
74 3300049582 Ga0501048_0026595 Ga0501048_0026595_2607_3848 391
75 3300049588 Ga0501072_0018289 Ga0501072_0018289_4138_5379 391
76 3300049591 Ga0501075_0045894 Ga0501075_0045894_416_1657 391
77 3300049741 Ga0501079_0014373 Ga0501079_0014373_2259_3500 391
78 3300049742 Ga0501080_0102966 Ga0501080_0102966_616_1857 391
79 3300039438 Ga0436360_0767389 Ga0436360_0767389_306_1493 392
80 3300025931 Ga0207644_10000150 Ga0207644_1000015037 393
81 3300039447 Ga0436361_1153064 Ga0436361_1153064_364_1548 393
82 3300039450 Ga0436363_0410724 Ga0436363_0410724_4054_5244 394
83 3300031235 Ga0265330_10015505 Ga0265330_100155053 395
84 3300037471 Ga0395905_0025159 Ga0395905_0025159_430_1617 395
85 3300045051 Ga0451576_0324331 Ga0451576_0324331_156_1379 395
86 3300006844 Ga0075428_100007116 Ga0075428_1000071164 396
87 3300006844 Ga0075428_100223789 Ga0075428_1002237892 396
88 3300009553 Ga0105249_10133962 Ga0105249_101339623 396
89 3300049591 Ga0501075_0042105 Ga0501075_0042105_541_1734 396
90 3300050508 nmdc:mga09592_11074_c1 nmdc:mga09592_11074_c1_4591_5814 396
91 3300054114 Ga0501084_0183647 Ga0501084_0183647_289_1518 396
92 3300006847 Ga0075431_100026482 Ga0075431_1000264825 397
93 3300049572 Ga0501036_0000620 Ga0501036_0000620_11944_13191 397
94 3300049572 Ga0501036_0084968 Ga0501036_0084968_1227_2468 397
95 3300049574 Ga0501038_0001024 Ga0501038_0001024_19789_21036 397
96 3300049575 Ga0501039_0000144 Ga0501039_0000144_38954_40201 397
97 3300049576 Ga0501040_0000365 Ga0501040_0000365_18954_20201 397
98 3300049577 Ga0501041_0000133 Ga0501041_0000133_12146_13393 397
99 3300049577 Ga0501041_0047314 Ga0501041_0047314_139_1332 397
100 3300049578 Ga0501042_0000373 Ga0501042_0000373_19989_21236 397
101 3300049580 Ga0501046_0001171 Ga0501046_0001171_14833_16080 397
102 3300049580 Ga0501046_0128828 Ga0501046_0128828_479_1720 397
103 3300049582 Ga0501048_0001857 Ga0501048_0001857_1834_3081 397
104 3300049582 Ga0501048_0116486 Ga0501048_0116486_336_1577 397
105 3300049584 Ga0501068_0001300 Ga0501068_0001300_1274_2521 397
106 3300049586 Ga0501070_0135403 Ga0501070_0135403_63_1310 397
107 3300049587 Ga0501071_0001631 Ga0501071_0001631_4166_5413 397
108 3300049587 Ga0501071_0016533 Ga0501071_0016533_1605_2846 397
109 3300049588 Ga0501072_0000384 Ga0501072_0000384_7954_9201 397
110 3300049588 Ga0501072_0128034 Ga0501072_0128034_565_1806 397
111 3300049590 Ga0501074_0007131 Ga0501074_0007131_6425_7672 397
112 3300049591 Ga0501075_0001822 Ga0501075_0001822_11887_13134 397
113 3300049591 Ga0501075_0079519 Ga0501075_0079519_821_2062 397
114 3300049592 Ga0501076_0042163 Ga0501076_0042163_1271_2512 397
115 3300049593 Ga0501077_0000383 Ga0501077_0000383_6249_7496 397
116 3300049741 Ga0501079_0000999 Ga0501079_0000999_11640_12887 397
117 3300049741 Ga0501079_0203520 Ga0501079_0203520_146_1387 397
118 3300049742 Ga0501080_0013640 Ga0501080_0013640_5853_7100 397
119 3300049742 Ga0501080_0056209 Ga0501080_0056209_990_2231 397
120 3300049743 Ga0501081_0000627 Ga0501081_0000627_18177_19424 397
121 3300049743 Ga0501081_0155016 Ga0501081_0155016_291_1532 397
122 3300049824 Ga0501045_0000405 Ga0501045_0000405_7871_9118 397
123 3300050510 nmdc:mga06r32_58289_c1 nmdc:mga06r32_58289_c1_290_1531 397
124 3300054114 Ga0501084_0002368 Ga0501084_0002368_6015_7262 397
125 3300054114 Ga0501084_0010192 Ga0501084_0010192_3810_5051 397
126 3300060353 Ga0501082_0012923 Ga0501082_0012923_5407_6654 397
127 3300061734 Ga0530510_0000374 Ga0530510_0000374_22317_23564 397
128 iso_pu_bacteria 2941479691 2941484313 397
129 3300005440 Ga0070705_100054170 Ga0070705_1000541702 398
130 3300005530 Ga0070679_100162681 Ga0070679_1001626812 398
131 3300005539 Ga0068853_100095118 Ga0068853_1000951183 398
132 3300006852 Ga0075433_10023575 Ga0075433_100235755 398
133 3300006871 Ga0075434_100085095 Ga0075434_1000850954 398
134 3300009147 Ga0114129_10015302 Ga0114129_1001530211 398
135 3300013307 Ga0157372_10524289 Ga0157372_105242891 398
136 3300025912 Ga0207707_10003765 Ga0207707_1000376511 398
137 3300025921 Ga0207652_10119711 Ga0207652_101197112 398
138 3300026118 Ga0207675_100421005 Ga0207675_1004210052 398
139 3300048908 Ga0496105_0178916 Ga0496105_0178916_25_1230 398
140 3300048924 Ga0496121_0000165 Ga0496121_0000165_15343_16548 398
141 3300048925 Ga0496122_0093170 Ga0496122_0093170_481_1686 398
142 3300048926 Ga0496123_0003339 Ga0496123_0003339_979_2184 398
143 3300048927 Ga0496124_0196260 Ga0496124_0196260_281_1486 398
144 3300048928 Ga0496125_0000121 Ga0496125_0000121_25810_27015 398
145 3300048929 Ga0496126_0126137 Ga0496126_0126137_561_1766 398
146 3300050507 nmdc:mga05p37_128139_c1 nmdc:mga05p37_128139_c1_263_1459 398
147 3300050514 nmdc:mga08x19_160147_c1 nmdc:mga08x19_160147_c1_276_1472 398
148 3300050515 nmdc:mga0a205_7017_c1 nmdc:mga0a205_7017_c1_5681_6916 398
149 3300009093 Ga0105240_10248034 Ga0105240_102480341 399
150 3300025925 Ga0207650_10013254 Ga0207650_100132544 399
151 3300050515 nmdc:mga0a205_168274_c1 nmdc:mga0a205_168274_c1_247_1461 399
152 3300005293 Ga0065715_10186276 Ga0065715_101862762 400
153 3300005330 Ga0070690_100197785 Ga0070690_1001977851 400
154 3300005444 Ga0070694_100066633 Ga0070694_1000666332 400
155 3300005518 Ga0070699_100077656 Ga0070699_1000776562 400
156 3300005543 Ga0070672_100031541 Ga0070672_1000315414 400
157 3300005544 Ga0070686_100062037 Ga0070686_1000620372 400
158 3300005618 Ga0068864_100148566 Ga0068864_1001485662 400
159 3300005843 Ga0068860_100116804 Ga0068860_1001168042 400
160 3300005937 Ga0081455_10002396 Ga0081455_100023964 400
161 3300005937 Ga0081455_10004372 Ga0081455_100043728 400
162 3300005985 Ga0081539_10000976 Ga0081539_1000097636 400
163 3300013306 Ga0163162_10042768 Ga0163162_100427684 400
164 3300014325 Ga0163163_10139129 Ga0163163_101391293 400
165 3300014326 Ga0157380_10011596 Ga0157380_100115964 400
166 3300025908 Ga0207643_10098688 Ga0207643_100986883 400
167 3300025940 Ga0207691_10063113 Ga0207691_100631132 400
168 3300037418 Ga0395900_0017710 Ga0395900_0017710_2382_3605 400
169 3300037466 Ga0395898_0012348 Ga0395898_0012348_6551_7774 400
170 3300038443 Ga0395901_0002844 Ga0395901_0002844_4745_5968 400
171 3300005347 Ga0070668_100045904 Ga0070668_1000459042 401
172 3300009553 Ga0105249_10000369 Ga0105249_1000036911 401
173 3300013297 Ga0157378_10180029 Ga0157378_101800292 401
174 3300013306 Ga0163162_10000019 Ga0163162_10000019151 401
175 3300025961 Ga0207712_10002100 Ga0207712_1000210011 401
176 3300025972 Ga0207668_10003574 Ga0207668_100035749 401
177 3300026075 Ga0207708_10084957 Ga0207708_100849572 401
178 3300005334 Ga0068869_100026290 Ga0068869_1000262902 402
179 3300005438 Ga0070701_10052905 Ga0070701_100529051 402
180 3300005440 Ga0070705_100047915 Ga0070705_1000479153 402
181 3300005468 Ga0070707_100006796 Ga0070707_1000067965 402
182 3300005471 Ga0070698_100003679 Ga0070698_10000367910 402
183 3300005536 Ga0070697_100000163 Ga0070697_10000016311 402
184 3300005546 Ga0070696_100028483 Ga0070696_1000284832 402
185 3300005546 Ga0070696_100081572 Ga0070696_1000815722 402
186 3300005549 Ga0070704_100013988 Ga0070704_1000139882 402
187 3300005549 Ga0070704_100151277 Ga0070704_1001512772 402
188 3300005719 Ga0068861_100027555 Ga0068861_1000275553 402
189 3300009148 Ga0105243_10001911 Ga0105243_100019117 402
190 3300009176 Ga0105242_10000121 Ga0105242_1000012148 402
191 3300009553 Ga0105249_10030863 Ga0105249_100308633 402
192 3300025934 Ga0207686_10000017 Ga0207686_10000017131 402
193 3300025935 Ga0207709_10000024 Ga0207709_10000024203 402
194 3300025942 Ga0207689_10068391 Ga0207689_100683912 402
195 3300026118 Ga0207675_100183361 Ga0207675_1001833612 402
196 3300003203 JGI25406J46586_10002740 JGI25406J46586_100027402 403
197 3300005536 Ga0070697_100160492 Ga0070697_1001604922 403
198 3300005985 Ga0081539_10001334 Ga0081539_1000133420 403
199 3300005985 Ga0081539_10005715 Ga0081539_100057158 403
200 3300006173 Ga0070716_100051537 Ga0070716_1000515372 403
201 3300007265 Ga0099794_10004024 Ga0099794_100040242 403
202 3300021384 Ga0213876_10000216 Ga0213876_1000021638 403
203 3300021384 Ga0213876_10013977 Ga0213876_100139774 403
204 3300025939 Ga0207665_10069379 Ga0207665_100693792 403
205 3300025981 Ga0207640_10083961 Ga0207640_100839612 403
206 3300039437 Ga0436365_0067166 Ga0436365_0067166_13356_14573 403
207 3300039437 Ga0436365_1517312 Ga0436365_1517312_4248_5465 403
208 3300046519 Ga0495632_0019392 Ga0495632_0019392_1848_3065 403
209 3300005295 Ga0065707_10003399 Ga0065707_100033992 404
210 3300005295 Ga0065707_10008895 Ga0065707_100088952 404
211 3300005330 Ga0070690_100059696 Ga0070690_1000596961 404
212 3300005444 Ga0070694_100051386 Ga0070694_1000513863 404
213 3300005536 Ga0070697_100060987 Ga0070697_1000609872 404
214 3300005544 Ga0070686_100041255 Ga0070686_1000412553 404
215 3300005617 Ga0068859_100004634 Ga0068859_1000046342 404
216 3300005841 Ga0068863_100211498 Ga0068863_1002114982 404
217 3300006871 Ga0075434_100073680 Ga0075434_1000736802 404
218 3300006914 Ga0075436_100000014 Ga0075436_100000014131 404
219 3300006931 Ga0097620_100004634 Ga0097620_1000046348 404
220 3300009094 Ga0111539_10287758 Ga0111539_102877582 404
221 3300009148 Ga0105243_10001431 Ga0105243_100014313 404
222 3300009174 Ga0105241_10130005 Ga0105241_101300052 404
223 3300013297 Ga0157378_10000002 Ga0157378_1000000283 404
224 3300025935 Ga0207709_10009646 Ga0207709_100096463 404
225 3300025942 Ga0207689_10144297 Ga0207689_101442972 404
226 3300027907 Ga0207428_10065617 Ga0207428_100656172 404
227 3300028380 Ga0268265_10160568 Ga0268265_101605682 404
228 3300045051 Ga0451576_0016925 Ga0451576_0016925_3040_4269 404
229 3300046664 Ga0495659_0034752 Ga0495659_0034752_412_1632 404
230 3300050508 nmdc:mga09592_20078_c1 nmdc:mga09592_20078_c1_2618_3838 404
231 3300050511 nmdc:mga08y16_215822_c1 nmdc:mga08y16_215822_c1_547_1767 404
232 3300050512 nmdc:mga0n895_84983_c1 nmdc:mga0n895_84983_c1_622_1836 404
233 3300050513 nmdc:mga0rr50_936_c1 nmdc:mga0rr50_936_c1_5362_6627 404
234 3300050515 nmdc:mga0a205_30534_c1 nmdc:mga0a205_30534_c1_1952_3166 404
235 3300031456 Ga0307513_10002983 Ga0307513_1000298311 405
236 3300002074 JGI24748J21848_1000059 JGI24748J21848_100005933 418
237 3300002239 JGI24034J26672_10000030 JGI24034J26672_1000003055 418
238 3300005355 Ga0070671_100016670 Ga0070671_1000166702 418
239 3300005842 Ga0068858_100000550 Ga0068858_10000055034 418
240 3300009101 Ga0105247_10000153 Ga0105247_1000015351 418
241 3300025900 Ga0207710_10000001 Ga0207710_100000011406 418
242 3300026035 Ga0207703_10000347 Ga0207703_100003473 418

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

79

409

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rnp-assembly2.cif.gz_B engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb2b9_h275e with 4-cl-trp non-covalently bound 0.978 13 410
6ami-assembly1.cif.gz_B engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb4d11 with trp non-covalently bound 0.9777 12 412
6cut-assembly1.cif.gz_A engineered holo trpb from pyrococcus furiosus, pftrpb7e6 with (2s,3s)-isopropylserine bound as the external aldimine 0.9769 12 411
6ami-assembly4.cif.gz_A-2 engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb4d11 with trp non-covalently bound 0.9768 12 411
6am8-assembly2.cif.gz_D engineered tryptophan synthase b-subunit from pyrococcus furiosus, pftrpb2b9 with trp bound as e(aex2) 0.9767 13 410
ID Description Score Start End Superfamily
af_P14671_91_282_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9825 23 208 3.40.50.1100
af_Q60179_69_392_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9769 62 403 3.40.50.1100
af_P43283_44_197_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.9764 58 204 3.60.21.10
af_Q60179_69_392_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9709 62 403 3.40.50.1100
af_Q60179_217_401_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.964 212 412 3.40.50.1100
ID Description Score Start End GO Terms
AF-G5SXB3-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 1.008 114 178 GO:0004834
GO:0005737
AF-A0A317YN28-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 1.003 107 210 GO:0004834
GO:0005737
AF-A0A2X3CN98-F1-model_v4 Tryptophan synthase beta chain (EC 4.2.1.20) 0.9963 99 223 GO:0004834
GO:0005737
AF-A0A3B9JCN6-F1-model_v4 Tryptophan synthase subunit beta (EC 4.2.1.20) 0.9891 295 412 GO:0004834
GO:0005737
AF-A0A7X5N1E2-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 0.9878 38 220 GO:0004834
GO:0005737
GO:0006568

Feature Viewer

pLDDT pTM Quality
87.63 0.88 High
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Predicted Structure (AlphaFold2)

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