F354570

General Info

Members Datasets Scaffolds Average Seq Length
242 163 484 412

Family's Representative Sequence

Representative Sequence 3300006852|Ga0075433_10006142|Ga0075433_100061426
Length 437
Sequence MKVLIADTFEQSGIDGLKAAGCEVVSDPDLKDDALRDAIAATGADVLVVRSTRVTAPMLDAGRLSLVVRAGAGYNTIDVAAASRRGIYVSNCPGKNAIAVAELAFALILALDRRVPDNVSELRAGRWNKKEYSKAQGLFGRTLGLLGAGSIGQEMIRRAAGFGMNVVLWSRRFDGQRRPLSDQEARELGVEDALRRIAIELEPTPADVAARADILSVHLALGDGTRELVNRDVLGRLKTGATLINTARGEVLDQAAVAAAVRDRGLRVGLDVFGREPAGATGEFADDLGSLPGVYGTHHIGASTEQAQEAIAAETVRIITTYKETGRVPNVVNLATRTPATHMLVVRHRDRPGVLAHVFDHLRADNLNVQETENIVFEGAEAAVARINLDGAPTTELCKRLKSGNENVLDLQVVGLAADTSKPSPVKGEGKRQKAEF

Samples

Sample ID Description Type Environment
1 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
95 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
100 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
101 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
102 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
103 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
104 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
108 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
109 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
110 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
111 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
112 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
113 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
114 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
115 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
137 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
138 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
141 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
144 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
145 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
146 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
147 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
148 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
152 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
157 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
158 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
159 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
161 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
162 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
163 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.44
Nodule 0
Rhizoplane 4.13
Rhizosphere 88.43
Stem 0
Stem Tuber 0
Unclassified 3.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075433_10006142 3300006852 Bacteria 9465
2 Ga0065715_10029182 3300005293 Bacteria 1583
3 Ga0065707_10007142 3300005295 Bacteria 3934
4 Ga0070658_10306284 3300005327 Bacteria 1355
5 Ga0070683_100009384 3300005329 Bacteria 8366
6 Ga0070690_100020070 3300005330 Bacteria 4067
7 Ga0070670_100003034 3300005331 Bacteria 13890
8 Ga0070670_100009991 3300005331 Bacteria 8099
9 Ga0070669_100000033 3300005353 Bacteria 144544
10 Ga0070669_100008140 3300005353 Bacteria 7488
11 Ga0070669_100061342 3300005353 Bacteria 2763
12 Ga0070675_100064725 3300005354 Bacteria 3023
13 Ga0070675_100065701 3300005354 Bacteria 3000
14 Ga0070671_100013198 3300005355 Bacteria 6655
15 Ga0070674_100014587 3300005356 Bacteria 4888
16 Ga0070674_100043215 3300005356 Bacteria 3064
17 Ga0070673_100004481 3300005364 Bacteria 8835
18 Ga0070673_100139983 3300005364 Bacteria 2040
19 Ga0070667_100129733 3300005367 Bacteria 2199
20 Ga0070705_100049633 3300005440 Bacteria 2437
21 Ga0070705_100059688 3300005440 Bacteria 2260
22 Ga0070700_100054912 3300005441 Bacteria 2491
23 Ga0070694_100006189 3300005444 Bacteria 7266
24 Ga0070708_100087151 3300005445 Bacteria 2837
25 Ga0070678_100083539 3300005456 Bacteria 2427
26 Ga0070678_100114472 3300005456 Bacteria 2116
27 Ga0070678_100116183 3300005456 Bacteria 2102
28 Ga0068867_100066969 3300005459 Bacteria 2676
29 Ga0070707_100083158 3300005468 Bacteria 3093
30 Ga0070699_100005305 3300005518 Bacteria 11306
31 Ga0070672_100020190 3300005543 Bacteria 4854
32 Ga0070695_100025143 3300005545 Bacteria 3674
33 Ga0070704_100010280 3300005549 Bacteria 5690
34 Ga0070704_100216532 3300005549 Bacteria 1554
35 Ga0068855_100087763 3300005563 Bacteria 3594
36 Ga0068855_100312636 3300005563 Bacteria 1738
37 Ga0070664_100116125 3300005564 Bacteria 2340
38 Ga0068854_100127552 3300005578 Bacteria 1939
39 Ga0070702_100050141 3300005615 Bacteria 2383
40 Ga0070702_100072024 3300005615 Bacteria 2044
41 Ga0068852_100222720 3300005616 Bacteria 1795
42 Ga0068859_100203432 3300005617 Bacteria 2065
43 Ga0068861_100109261 3300005719 Bacteria 2213
44 Ga0068851_10081960 3300005834 Bacteria 1686
45 Ga0068863_100023338 3300005841 Bacteria 5910
46 Ga0068863_100131670 3300005841 Bacteria 2388
47 Ga0068863_100355081 3300005841 Bacteria 1428
48 Ga0068858_100334151 3300005842 Bacteria 1449
49 Ga0068862_100160635 3300005844 Bacteria 2005
50 Ga0075368_10041096 3300006042 Bacteria 1816
51 Ga0075364_10016191 3300006051 Bacteria 4637
52 Ga0075364_10025378 3300006051 Bacteria 3772
53 Ga0075362_10005045 3300006177 Bacteria 4795
54 Ga0075367_10121249 3300006178 Bacteria 1611
55 Ga0075366_10024162 3300006195 Bacteria 3545
56 Ga0075370_10084701 3300006353 Bacteria 1825
57 Ga0075428_100007769 3300006844 Bacteria 11888
58 Ga0075428_100024770 3300006844 Bacteria 6639
59 Ga0075428_100028166 3300006844 Bacteria 6214
60 Ga0075428_100083671 3300006844 Bacteria 3481
61 Ga0075428_100278999 3300006844 Bacteria 1798
62 Ga0075430_100008280 3300006846 Bacteria 8782
63 Ga0075430_100011434 3300006846 Bacteria 7537
64 Ga0075431_100022339 3300006847 Bacteria 6466
65 Ga0075431_100033802 3300006847 Bacteria 5268
66 Ga0075431_100041564 3300006847 Bacteria 4740
67 Ga0075434_100050958 3300006871 Bacteria 4112
68 Ga0075434_100091608 3300006871 Bacteria 3042
69 Ga0075429_100002547 3300006880 Bacteria 15353
70 Ga0075429_100004539 3300006880 Bacteria 11938
71 Ga0075429_100098903 3300006880 Bacteria 2546
72 Ga0075436_100013123 3300006914 Bacteria 5680
73 Ga0097620_100203419 3300006931 Bacteria 2065
74 Ga0075435_100004693 3300007076 Bacteria 9423
75 Ga0075435_100173938 3300007076 Bacteria 1817
76 Ga0111539_10000765 3300009094 Bacteria 41847
77 Ga0111539_10017287 3300009094 Bacteria 8926
78 Ga0111539_10178487 3300009094 Bacteria 2481
79 Ga0111539_10313748 3300009094 Bacteria 1825
80 Ga0105245_10082887 3300009098 Bacteria 2934
81 Ga0105247_10030087 3300009101 Bacteria 3292
82 Ga0114129_10001892 3300009147 Bacteria 28549
83 Ga0114129_10002026 3300009147 Bacteria 27759
84 Ga0114129_10002123 3300009147 Bacteria 27329
85 Ga0114129_10006945 3300009147 Bacteria 16106
86 Ga0114129_10016847 3300009147 Bacteria 10405
87 Ga0114129_10022639 3300009147 Bacteria 8912
88 Ga0114129_10040410 3300009147 Bacteria 6575
89 Ga0105241_10079622 3300009174 Bacteria 2563
90 Ga0105242_10065196 3300009176 Bacteria 3004
91 Ga0105248_10039079 3300009177 Bacteria 5313
92 Ga0105238_10026266 3300009551 Bacteria 5935
93 Ga0105238_10214228 3300009551 Bacteria 1902
94 Ga0105249_10120574 3300009553 Bacteria 2492
95 Ga0157378_10020220 3300013297 Bacteria 5856
96 Ga0157372_10080262 3300013307 Bacteria 3690
97 Ga0163163_10016860 3300014325 Bacteria 6801
98 Ga0163163_10332142 3300014325 Bacteria 1575
99 Ga0207697_10005657 3300025315 Bacteria 5771
100 Ga0207682_10011621 3300025893 Bacteria 3440
101 Ga0207710_10046542 3300025900 Bacteria 1937
102 Ga0207688_10029100 3300025901 Bacteria 3040
103 Ga0207680_10048081 3300025903 Bacteria 2531
104 Ga0207647_10045270 3300025904 Bacteria 2746
105 Ga0207645_10007409 3300025907 Bacteria 7756
106 Ga0207684_10132845 3300025910 Bacteria 2136
107 Ga0207662_10005056 3300025918 Bacteria 6987
108 Ga0207681_10000011 3300025923 Bacteria 366878
109 Ga0207681_10018005 3300025923 Bacteria 4444
110 Ga0207681_10155483 3300025923 Bacteria 1718
111 Ga0207650_10004892 3300025925 Bacteria 9151
112 Ga0207650_10199836 3300025925 Bacteria 1601
113 Ga0207659_10107761 3300025926 Bacteria 2112
114 Ga0207659_10115332 3300025926 Bacteria 2049
115 Ga0207644_10095199 3300025931 Bacteria 2226
116 Ga0207690_10103595 3300025932 Bacteria 2037
117 Ga0207690_10222294 3300025932 Bacteria 1445
118 Ga0207686_10028355 3300025934 Bacteria 3290
119 Ga0207669_10039268 3300025937 Bacteria 2733
120 Ga0207691_10009469 3300025940 Bacteria 9354
121 Ga0207691_10112389 3300025940 Bacteria 2421
122 Ga0207711_10013662 3300025941 Bacteria 6742
123 Ga0207689_10037712 3300025942 Bacteria 4007
124 Ga0207661_10043259 3300025944 Bacteria 3554
125 Ga0207679_10017463 3300025945 Bacteria 4787
126 Ga0207679_10094450 3300025945 Bacteria 2322
127 Ga0207651_10041701 3300025960 Bacteria 3048
128 Ga0207677_10045266 3300026023 Bacteria 2938
129 Ga0207708_10004118 3300026075 Bacteria 10703
130 Ga0207708_10141806 3300026075 Bacteria 1886
131 Ga0207641_10074630 3300026088 Bacteria 2926
132 Ga0207641_10178032 3300026088 Bacteria 1946
133 Ga0207648_10000815 3300026089 Bacteria 35275
134 Ga0207676_10052880 3300026095 Bacteria 3177
135 Ga0207675_100006298 3300026118 Bacteria 11262
136 Ga0207683_10036760 3300026121 Bacteria 4265
137 Ga0207683_10219457 3300026121 Bacteria 1732
138 Ga0207683_10270108 3300026121 Bacteria 1553
139 Ga0207698_10013292 3300026142 Bacteria 5426
140 Ga0207428_10004558 3300027907 Bacteria 13127
141 Ga0307408_100013401 3300031548 Bacteria 5441
142 Ga0307408_100133493 3300031548 Bacteria 1939
143 Ga0307413_10138120 3300031824 Bacteria 1680
144 Ga0307410_10027822 3300031852 Bacteria 3577
145 Ga0307412_10023307 3300031911 Bacteria 3807
146 Ga0307412_10043720 3300031911 Bacteria 2919
147 Ga0307412_10064308 3300031911 Bacteria 2478
148 Ga0307409_100054105 3300031995 Bacteria 3089
149 Ga0307409_100063554 3300031995 Bacteria 2895
150 Ga0307416_100141527 3300032002 Bacteria 2187
151 Ga0307414_10123821 3300032004 Bacteria 1993
152 Ga0307414_10134519 3300032004 Bacteria 1925
153 Ga0307411_10030781 3300032005 Bacteria 3294
154 Ga0373961_0015886 3300035241 Bacteria 1932
155 Ga0373925_0006912 3300037068 Bacteria 8301
156 Ga0439439_0017179 3300041406 Bacteria 1777
157 Ga0439456_021340 3300042013 Bacteria 1370
158 Ga0451577_0020618 3300042876 Bacteria 6045
159 Ga0451577_0053658 3300042876 Bacteria 3598
160 Ga0453684_0314318 3300044712 Bacteria 1776
161 Ga0453684_0397868 3300044712 Bacteria 1543
162 Ga0495603_0007425 3300046455 Bacteria 6592
163 Ga0495638_0013354 3300046460 Bacteria 5596
164 Ga0495594_0020837 3300046499 Bacteria 3494
165 Ga0495642_0003551 3300046528 Bacteria 6141
166 Ga0495609_0046693 3300046538 Bacteria 1939
167 Ga0495659_0002900 3300046664 Bacteria 5502
168 Ga0495659_0011767 3300046664 Bacteria 2821
169 Ga0495588_0011792 3300046674 Bacteria 4112
170 Ga0495636_0006757 3300047318 Bacteria 4509
171 Ga0495685_016479 3300047447 Bacteria 2524
172 Ga0496102_0156869 3300048905 Bacteria 2140
173 Ga0496104_0308857 3300048907 Unclassified 1494
174 Ga0496105_0135227 3300048908 Bacteria 2031
175 Ga0496106_0154558 3300048909 Bacteria 1811
176 Ga0496109_0063586 3300048912 Bacteria 3376
177 Ga0496110_0052525 3300048913 Bacteria 3581
178 Ga0496112_0281871 3300048915 Bacteria 1609
179 Ga0496113_0118658 3300048916 Bacteria 2066
180 Ga0496113_0189809 3300048916 Bacteria 1631
181 Ga0496114_0148379 3300048917 Bacteria 2034
182 Ga0501299_013374 3300049522 Bacteria 1415
183 Ga0501031_0064987 3300049568 Bacteria 2377
184 Ga0501034_0017134 3300049571 Bacteria 7433
185 Ga0501036_0123853 3300049572 Bacteria 2183
186 Ga0501040_0024503 3300049576 Bacteria 4050
187 Ga0501047_0111731 3300049581 Bacteria 2615
188 Ga0501048_0064959 3300049582 Bacteria 2581
189 Ga0501069_0028068 3300049585 Bacteria 3086
190 Ga0501071_0014244 3300049587 Bacteria 5440
191 Ga0501071_0027981 3300049587 Bacteria 3969
192 Ga0501072_0019545 3300049588 Bacteria 5238
193 Ga0501072_0076002 3300049588 Unclassified 2657
194 Ga0501073_0005516 3300049589 Bacteria 9476
195 Ga0501075_0013279 3300049591 Bacteria 5877
196 Ga0501075_0105429 3300049591 Bacteria 2142
197 Ga0501076_0008041 3300049592 Bacteria 7706
198 Ga0501076_0045073 3300049592 Bacteria 3480
199 Ga0501076_0161009 3300049592 Bacteria 1828
200 Ga0501249_012943 3300049679 Bacteria 1768
201 Ga0501079_0041835 3300049741 Bacteria 3538
202 Ga0501081_0161050 3300049743 Bacteria 1617
203 Ga0501083_0059766 3300049744 Bacteria 2549
204 Ga0501045_0003090 3300049824 Bacteria 11380
205 nmdc:mga03683_9452_c1 3300050489 Bacteria 3469
206 nmdc:mga00v17_11011_c1 3300050491 Bacteria 4957
207 nmdc:mga0yw44_1049_c1 3300050492 Bacteria 10624
208 nmdc:mga0yw44_34172_c1 3300050492 Bacteria 2977
209 nmdc:mga0k408_87013_c1 3300050493 Bacteria 1835
210 nmdc:mga06z11_53873_c1 3300050494 Bacteria 2071
211 nmdc:mga07m45_67333_c1 3300050496 Bacteria 2035
212 nmdc:mga05p37_12022_c1 3300050507 Bacteria 10328
213 nmdc:mga05p37_150507_c1 3300050507 Bacteria 2847
214 nmdc:mga05p37_170627_c1 3300050507 Bacteria 2653
215 nmdc:mga05p37_48307_c1 3300050507 Bacteria 5234
216 nmdc:mga05p37_48793_c1 3300050507 Bacteria 5206
217 nmdc:mga09592_186457_c1 3300050508 Bacteria 1795
218 nmdc:mga09592_339700_c1 3300050508 Unclassified 1300
219 nmdc:mga09592_4078_c1 3300050508 Bacteria 11794
220 nmdc:mga09592_8362_c1 3300050508 Bacteria 8410
221 nmdc:mga0qj67_120474_c1 3300050509 Bacteria 2122
222 nmdc:mga0qj67_186146_c1 3300050509 Unclassified 1687
223 nmdc:mga0qj67_5436_c1 3300050509 Bacteria 9304
224 nmdc:mga06r32_278826_c1 3300050510 Unclassified 1659
225 nmdc:mga06r32_991_c1 3300050510 Bacteria 25466
226 nmdc:mga08y16_133_c1 3300050511 Bacteria 64498
227 nmdc:mga08y16_197848_c1 3300050511 Unclassified 2083
228 nmdc:mga08y16_394413_c1 3300050511 Unclassified 1417
229 nmdc:mga0n895_205066_c1 3300050512 Bacteria 2002
230 nmdc:mga0n895_259919_c1 3300050512 Bacteria 1762
231 nmdc:mga0n895_45391_c1 3300050512 Bacteria 4288
232 nmdc:mga0rr50_11328_c1 3300050513 Bacteria 5704
233 nmdc:mga0a205_322436_c1 3300050515 Bacteria 1416
234 Ga0495619_0133044 3300053085 Bacteria 1710
235 Ga0500641_0001017 3300053096 Bacteria 9965
236 Ga0500555_000156 3300053103 Bacteria 32598
237 Ga0500616_0000464 3300053153 Bacteria 52724
238 Ga0500645_000473 3300053730 Bacteria 27480
239 Ga0501084_0025572 3300054114 Bacteria 4925
240 Ga0501084_0029622 3300054114 Bacteria 4580
241 Ga0501084_0090092 3300054114 Unclassified 2575
242 Ga0530510_0002590 3300061734 Bacteria 12419
243 Ga0075433_10006142
244 Ga0065715_10029182
245 Ga0065707_10007142
246 Ga0070658_10306284
247 Ga0070683_100009384
248 Ga0070690_100020070
249 Ga0070670_100003034
250 Ga0070670_100009991
251 Ga0070669_100000033
252 Ga0070669_100008140
253 Ga0070669_100061342
254 Ga0070675_100064725
255 Ga0070675_100065701
256 Ga0070671_100013198
257 Ga0070674_100014587
258 Ga0070674_100043215
259 Ga0070673_100004481
260 Ga0070673_100139983
261 Ga0070667_100129733
262 Ga0070705_100049633
263 Ga0070705_100059688
264 Ga0070700_100054912
265 Ga0070694_100006189
266 Ga0070708_100087151
267 Ga0070678_100083539
268 Ga0070678_100114472
269 Ga0070678_100116183
270 Ga0068867_100066969
271 Ga0070707_100083158
272 Ga0070699_100005305
273 Ga0070672_100020190
274 Ga0070695_100025143
275 Ga0070704_100010280
276 Ga0070704_100216532
277 Ga0068855_100087763
278 Ga0068855_100312636
279 Ga0070664_100116125
280 Ga0068854_100127552
281 Ga0070702_100050141
282 Ga0070702_100072024
283 Ga0068852_100222720
284 Ga0068859_100203432
285 Ga0068861_100109261
286 Ga0068851_10081960
287 Ga0068863_100023338
288 Ga0068863_100131670
289 Ga0068863_100355081
290 Ga0068858_100334151
291 Ga0068862_100160635
292 Ga0075368_10041096
293 Ga0075364_10016191
294 Ga0075364_10025378
295 Ga0075362_10005045
296 Ga0075367_10121249
297 Ga0075366_10024162
298 Ga0075370_10084701
299 Ga0075428_100007769
300 Ga0075428_100024770
301 Ga0075428_100028166
302 Ga0075428_100083671
303 Ga0075428_100278999
304 Ga0075430_100008280
305 Ga0075430_100011434
306 Ga0075431_100022339
307 Ga0075431_100033802
308 Ga0075431_100041564
309 Ga0075434_100050958
310 Ga0075434_100091608
311 Ga0075429_100002547
312 Ga0075429_100004539
313 Ga0075429_100098903
314 Ga0075436_100013123
315 Ga0097620_100203419
316 Ga0075435_100004693
317 Ga0075435_100173938
318 Ga0111539_10000765
319 Ga0111539_10017287
320 Ga0111539_10178487
321 Ga0111539_10313748
322 Ga0105245_10082887
323 Ga0105247_10030087
324 Ga0114129_10001892
325 Ga0114129_10002026
326 Ga0114129_10002123
327 Ga0114129_10006945
328 Ga0114129_10016847
329 Ga0114129_10022639
330 Ga0114129_10040410
331 Ga0105241_10079622
332 Ga0105242_10065196
333 Ga0105248_10039079
334 Ga0105238_10026266
335 Ga0105238_10214228
336 Ga0105249_10120574
337 Ga0157378_10020220
338 Ga0157372_10080262
339 Ga0163163_10016860
340 Ga0163163_10332142
341 Ga0207697_10005657
342 Ga0207682_10011621
343 Ga0207710_10046542
344 Ga0207688_10029100
345 Ga0207680_10048081
346 Ga0207647_10045270
347 Ga0207645_10007409
348 Ga0207684_10132845
349 Ga0207662_10005056
350 Ga0207681_10000011
351 Ga0207681_10018005
352 Ga0207681_10155483
353 Ga0207650_10004892
354 Ga0207650_10199836
355 Ga0207659_10107761
356 Ga0207659_10115332
357 Ga0207644_10095199
358 Ga0207690_10103595
359 Ga0207690_10222294
360 Ga0207686_10028355
361 Ga0207669_10039268
362 Ga0207691_10009469
363 Ga0207691_10112389
364 Ga0207711_10013662
365 Ga0207689_10037712
366 Ga0207661_10043259
367 Ga0207679_10017463
368 Ga0207679_10094450
369 Ga0207651_10041701
370 Ga0207677_10045266
371 Ga0207708_10004118
372 Ga0207708_10141806
373 Ga0207641_10074630
374 Ga0207641_10178032
375 Ga0207648_10000815
376 Ga0207676_10052880
377 Ga0207675_100006298
378 Ga0207683_10036760
379 Ga0207683_10219457
380 Ga0207683_10270108
381 Ga0207698_10013292
382 Ga0207428_10004558
383 Ga0307408_100013401
384 Ga0307408_100133493
385 Ga0307413_10138120
386 Ga0307410_10027822
387 Ga0307412_10023307
388 Ga0307412_10043720
389 Ga0307412_10064308
390 Ga0307409_100054105
391 Ga0307409_100063554
392 Ga0307416_100141527
393 Ga0307414_10123821
394 Ga0307414_10134519
395 Ga0307411_10030781
396 Ga0373961_0015886
397 Ga0373925_0006912
398 Ga0439439_0017179
399 Ga0439456_021340
400 Ga0451577_0020618
401 Ga0451577_0053658
402 Ga0453684_0314318
403 Ga0453684_0397868
404 Ga0495603_0007425
405 Ga0495638_0013354
406 Ga0495594_0020837
407 Ga0495642_0003551
408 Ga0495609_0046693
409 Ga0495659_0002900
410 Ga0495659_0011767
411 Ga0495588_0011792
412 Ga0495636_0006757
413 Ga0495685_016479
414 Ga0496102_0156869
415 Ga0496104_0308857
416 Ga0496105_0135227
417 Ga0496106_0154558
418 Ga0496109_0063586
419 Ga0496110_0052525
420 Ga0496112_0281871
421 Ga0496113_0118658
422 Ga0496113_0189809
423 Ga0496114_0148379
424 Ga0501299_013374
425 Ga0501031_0064987
426 Ga0501034_0017134
427 Ga0501036_0123853
428 Ga0501040_0024503
429 Ga0501047_0111731
430 Ga0501048_0064959
431 Ga0501069_0028068
432 Ga0501071_0014244
433 Ga0501071_0027981
434 Ga0501072_0019545
435 Ga0501072_0076002
436 Ga0501073_0005516
437 Ga0501075_0013279
438 Ga0501075_0105429
439 Ga0501076_0008041
440 Ga0501076_0045073
441 Ga0501076_0161009
442 Ga0501249_012943
443 Ga0501079_0041835
444 Ga0501081_0161050
445 Ga0501083_0059766
446 Ga0501045_0003090
447 nmdc:mga03683_9452_c1
448 nmdc:mga00v17_11011_c1
449 nmdc:mga0yw44_1049_c1
450 nmdc:mga0yw44_34172_c1
451 nmdc:mga0k408_87013_c1
452 nmdc:mga06z11_53873_c1
453 nmdc:mga07m45_67333_c1
454 nmdc:mga05p37_12022_c1
455 nmdc:mga05p37_150507_c1
456 nmdc:mga05p37_170627_c1
457 nmdc:mga05p37_48307_c1
458 nmdc:mga05p37_48793_c1
459 nmdc:mga09592_186457_c1
460 nmdc:mga09592_339700_c1
461 nmdc:mga09592_4078_c1
462 nmdc:mga09592_8362_c1
463 nmdc:mga0qj67_120474_c1
464 nmdc:mga0qj67_186146_c1
465 nmdc:mga0qj67_5436_c1
466 nmdc:mga06r32_278826_c1
467 nmdc:mga06r32_991_c1
468 nmdc:mga08y16_133_c1
469 nmdc:mga08y16_197848_c1
470 nmdc:mga08y16_394413_c1
471 nmdc:mga0n895_205066_c1
472 nmdc:mga0n895_259919_c1
473 nmdc:mga0n895_45391_c1
474 nmdc:mga0rr50_11328_c1
475 nmdc:mga0a205_322436_c1
476 Ga0495619_0133044
477 Ga0500641_0001017
478 Ga0500555_000156
479 Ga0500616_0000464
480 Ga0500645_000473
481 Ga0501084_0025572
482 Ga0501084_0029622
483 Ga0501084_0090092
484 Ga0530510_0002590

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00389

2-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

3

333

0.97

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

142

285

0.91

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

105

301

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wwk-assembly1.cif.gz_B crystal structure of phosphoglycerate dehydrogenase from pyrococcus horikoshii ot3 0.9202 1 320
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.9174 97 307
1wwk-assembly1.cif.gz_B crystal structure of phosphoglycerate dehydrogenase from pyrococcus horikoshii ot3 0.9114 1 320
7dkm-assembly1.cif.gz_A phgdh covalently linked to oridonin 0.9109 2 323
7cvp-assembly1.cif.gz_B the crystal structure of human phgdh from biortus. 0.9102 91 316
ID Description Score Start End Superfamily
af_Q58424_451_524_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9488 342 415 3.30.70.260
af_Q2FXK1_457_530_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9387 342 415 3.30.70.260
af_I1M9H5_373_429_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9322 342 388 3.30.70.260
3ddnB04 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9272 342 415 3.30.70.260
af_Q58424_451_524_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.9243 342 415 3.30.70.260
ID Description Score Start End GO Terms
AF-A0A2T2VFT7-F1-model_v4 Hydroxyacid dehydrogenase 0.9668 1 94 GO:0016616
GO:0051287
AF-A0A521T6B7-F1-model_v4 Hydroxyacid dehydrogenase 0.959 1 331 GO:0016616
GO:0051287
AF-A0A521T6B7-F1-model_v4 Hydroxyacid dehydrogenase 0.9534 1 331 GO:0016616
GO:0051287
AF-A0A7W0NN20-F1-model_v4 ACT domain-containing protein 0.9394 339 415
AF-A0A7X6A6N6-F1-model_v4 ACT domain-containing protein 0.9369 338 415

Map