F354511

General Info

Members Datasets Scaffolds Average Seq Length
242 146 234 304

Family's Representative Sequence

Representative Sequence 3300005719|Ga0068861_100211426|Ga0068861_1002114262
Length 334
Sequence MGSSWNGCTQGKFLHGALVLRAMTEELQSAADVLMIRPLQFAGNPQTAESNRFQHSAPHLSAAQVQAAAAREFETLAGALRAAGVNVHAFDDTPQPHTPDSIFPNNWVSFHADGTVVLYPMLAENRRQERRADLLETISARLGFRVARVLDLTHHEGGAKFLEGTGSLVLDRAHRIAYACVSPRTDLDVLGDFAQQLDYDVVAFEAADASGAPIYHTNVLMCIGARFAAICPDCIRADERGAVLDALRRTGHELVELSMEQLAAFAGNMLELRSARGTGVVAMSQTALDSLSAQQRATIERLSGPIVASAIPTIETLGGGSVRCMLAEIHLPKK

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
3 2818991444 Filimonas endophytica 3197 Isolate Unclassified
4 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
5 2919395869 Microbacterium resistens 2980 Isolate Unclassified
6 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
7 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
8 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
9 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
10 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
11 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
15 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
16 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
17 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
21 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
71 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
104 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
105 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
106 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
111 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
112 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
113 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
116 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
117 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
118 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
119 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
120 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
121 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
124 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
129 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
130 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
134 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
137 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
138 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
139 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
140 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
141 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
142 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
143 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
144 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
145 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
146 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.28
Metatranscriptomes 0.41
Isolates 3.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.44
Nodule 0.41
Rhizoplane 0
Rhizosphere 84.71
Stem 0
Stem Tuber 0
Unclassified 7.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1021933 3300001904 Bacteria 1001
2 JGI24737J22298_10003403 3300001990 Bacteria 5623
3 JGI24737J22298_10037078 3300001990 Bacteria 1503
4 JGI25162J39368_1000022 3300002737 Bacteria 239510
5 rootH1_10161124 3300003316 Bacteria 1074
6 rootH2_10025473 3300003320 Bacteria 20163
7 rootL2_10087063 3300003322 Bacteria 3049
8 rootL2_10173794 3300003322 Bacteria 2572
9 rootL2_10249449 3300003322 Bacteria 2171
10 rootH1_10078088 3300003323 Bacteria 15401
11 rootH1_10129054 3300003323 Bacteria 1544
12 Ga0058862_12134120 3300004803 Bacteria 1664
13 Ga0065707_10098106 3300005295 Bacteria 3104
14 Ga0070658_10000019 3300005327 Bacteria 194742
15 Ga0070676_10000165 3300005328 Bacteria 26705
16 Ga0070680_100055162 3300005336 Bacteria 3247
17 Ga0070660_100037245 3300005339 Bacteria 3688
18 Ga0070671_100096881 3300005355 Bacteria 2474
19 Ga0070673_100005148 3300005364 Bacteria 8341
20 Ga0070659_100007956 3300005366 Bacteria 7725
21 Ga0070663_100009289 3300005455 Bacteria 6085
22 Ga0070678_100004801 3300005456 Bacteria 7714
23 Ga0070678_100023883 3300005456 Bacteria 4083
24 Ga0070662_100000185 3300005457 Bacteria 36147
25 Ga0070662_100120766 3300005457 Bacteria 2008
26 Ga0070681_10006502 3300005458 Bacteria 11374
27 Ga0068867_100001301 3300005459 Bacteria 17246
28 Ga0070679_100147634 3300005530 Unclassified 2329
29 Ga0070679_100257421 3300005530 Bacteria 1701
30 Ga0068853_100020998 3300005539 Bacteria 5436
31 Ga0068853_100021250 3300005539 Bacteria 5407
32 Ga0068853_100050520 3300005539 Bacteria 3577
33 Ga0070672_100064160 3300005543 Bacteria 2901
34 Ga0070665_100000003 3300005548 Bacteria 811857
35 Ga0068855_100000196 3300005563 Bacteria 78135
36 Ga0068855_100029999 3300005563 Bacteria 6504
37 Ga0068855_100034769 3300005563 Bacteria 6006
38 Ga0068855_100181114 3300005563 Bacteria 2382
39 Ga0068855_100360108 3300005563 Bacteria 1601
40 Ga0068856_100002099 3300005614 Bacteria 20660
41 Ga0068856_100504918 3300005614 Bacteria 1230
42 Ga0068852_100000372 3300005616 Bacteria 30292
43 Ga0068859_100022722 3300005617 Bacteria 6289
44 Ga0068861_100211426 3300005719 Bacteria 1634
45 Ga0068862_100277991 3300005844 Bacteria 1534
46 Ga0075366_10003785 3300006195 Bacteria 8046
47 Ga0097621_100000054 3300006237 Bacteria 59756
48 Ga0068871_100000145 3300006358 Bacteria 46320
49 Ga0075428_100003235 3300006844 Bacteria 17827
50 Ga0075428_100064402 3300006844 Bacteria 4014
51 Ga0075428_100199815 3300006844 Bacteria 2162
52 Ga0075430_100012628 3300006846 Bacteria 7193
53 Ga0075430_100036306 3300006846 Bacteria 4179
54 Ga0075430_100049279 3300006846 Bacteria 3555
55 Ga0075430_100069916 3300006846 Bacteria 2944
56 Ga0075430_100072766 3300006846 Bacteria 2882
57 Ga0075431_100000066 3300006847 Bacteria 60439
58 Ga0075431_100085088 3300006847 Bacteria 3264
59 Ga0075431_100204507 3300006847 Unclassified 2019
60 Ga0075429_100008018 3300006880 Bacteria 9176
61 Ga0075429_100040671 3300006880 Bacteria 4048
62 Ga0068865_100000051 3300006881 Bacteria 65346
63 Ga0097620_100022722 3300006931 Bacteria 6289
64 Ga0099826_10144825 3300006948 Bacteria 1367
65 Ga0105240_10046359 3300009093 Bacteria 5508
66 Ga0105240_10262310 3300009093 Bacteria 1992
67 Ga0105240_10306892 3300009093 Bacteria 1814
68 Ga0111539_10000583 3300009094 Bacteria 47022
69 Ga0111539_10011812 3300009094 Bacteria 10948
70 Ga0114129_10000564 3300009147 Bacteria 45529
71 Ga0114129_10006057 3300009147 Bacteria 17141
72 Ga0114129_10776370 3300009147 Bacteria 1224
73 Ga0105241_10038169 3300009174 Bacteria 3621
74 Ga0105241_10537889 3300009174 Bacteria 1047
75 Ga0105242_10039325 3300009176 Bacteria 3806
76 Ga0105242_10306952 3300009176 Bacteria 1450
77 Ga0105237_10001447 3300009545 Bacteria 31365
78 Ga0105237_10002246 3300009545 Bacteria 24061
79 Ga0105237_10071602 3300009545 Bacteria 3461
80 Ga0105237_10072705 3300009545 Bacteria 3432
81 Ga0105237_10164798 3300009545 Bacteria 2215
82 Ga0105238_10174471 3300009551 Bacteria 2126
83 Ga0105239_10000005 3300010375 Bacteria 496066
84 Ga0105239_10009550 3300010375 Bacteria 10916
85 Ga0105239_10011559 3300010375 Bacteria 9848
86 Ga0105239_10048984 3300010375 Bacteria 4633
87 Ga0105239_10113934 3300010375 Bacteria 2999
88 Ga0105246_10211105 3300011119 Bacteria 1515
89 Ga0157373_10004561 3300013100 Bacteria 10418
90 Ga0157373_10033925 3300013100 Bacteria 3667
91 Ga0157371_10000622 3300013102 Bacteria 42231
92 Ga0157370_10009907 3300013104 Bacteria 10097
93 Ga0157370_10378527 3300013104 Bacteria 1304
94 Ga0157369_10000165 3300013105 Bacteria 93924
95 Ga0157369_10013625 3300013105 Bacteria 9197
96 Ga0157369_10039468 3300013105 Bacteria 5159
97 Ga0157374_10001618 3300013296 Bacteria 18887
98 Ga0157374_10005445 3300013296 Bacteria 10694
99 Ga0157374_10006545 3300013296 Bacteria 9895
100 Ga0157374_10065122 3300013296 Bacteria 3422
101 Ga0157378_10019516 3300013297 Bacteria 5960
102 Ga0157378_10035019 3300013297 Bacteria 4439
103 Ga0163162_10000064 3300013306 Bacteria 103542
104 Ga0157372_10000021 3300013307 Bacteria 207801
105 Ga0157372_10001155 3300013307 Bacteria 28553
106 Ga0157372_10002338 3300013307 Bacteria 20532
107 Ga0157372_10081723 3300013307 Bacteria 3657
108 Ga0157372_10166220 3300013307 Bacteria 2551
109 Ga0157375_10085927 3300013308 Bacteria 3196
110 Ga0157380_10002259 3300014326 Bacteria 12953
111 Ga0157376_10146641 3300014969 Bacteria 2124
112 Ga0213872_10040897 3300021361 Bacteria 2116
113 Ga0209437_100024 3300025233 Bacteria 592878
114 Ga0207647_10000093 3300025904 Bacteria 68094
115 Ga0207647_10000494 3300025904 Bacteria 31578
116 Ga0207647_10026398 3300025904 Bacteria 3801
117 Ga0207645_10000652 3300025907 Bacteria 28838
118 Ga0207705_10000069 3300025909 Bacteria 133094
119 Ga0207707_10013428 3300025912 Bacteria 7138
120 Ga0207695_10003137 3300025913 Bacteria 23613
121 Ga0207695_10099608 3300025913 Bacteria 2903
122 Ga0207695_10166577 3300025913 Bacteria 2131
123 Ga0207695_10340453 3300025913 Bacteria 1387
124 Ga0207671_10001726 3300025914 Bacteria 24605
125 Ga0207671_10040067 3300025914 Bacteria 3468
126 Ga0207671_10071550 3300025914 Bacteria 2587
127 Ga0207671_10072461 3300025914 Bacteria 2571
128 Ga0207671_10347925 3300025914 Bacteria 1175
129 Ga0207660_10010752 3300025917 Bacteria 5948
130 Ga0207657_10071997 3300025919 Bacteria 2925
131 Ga0207652_10024132 3300025921 Bacteria 5043
132 Ga0207652_10275515 3300025921 Unclassified 1518
133 Ga0207644_10207775 3300025931 Bacteria 1547
134 Ga0207690_10007623 3300025932 Bacteria 6420
135 Ga0207706_10000243 3300025933 Bacteria 59842
136 Ga0207706_10131131 3300025933 Bacteria 2205
137 Ga0207704_10000046 3300025938 Bacteria 86187
138 Ga0207667_10000037 3300025949 Bacteria 297252
139 Ga0207667_10009667 3300025949 Bacteria 11342
140 Ga0207667_10048519 3300025949 Bacteria 4489
141 Ga0207667_10081701 3300025949 Bacteria 3348
142 Ga0207667_10666722 3300025949 Bacteria 1045
143 Ga0207651_10078485 3300025960 Bacteria 2368
144 Ga0207668_10391935 3300025972 Bacteria 1172
145 Ga0207639_10006017 3300026041 Bacteria 8229
146 Ga0207639_10438232 3300026041 Bacteria 1184
147 Ga0207678_10027496 3300026067 Bacteria 4963
148 Ga0207702_10047398 3300026078 Bacteria 3621
149 Ga0207702_10413706 3300026078 Bacteria 1302
150 Ga0207648_10000257 3300026089 Bacteria 57438
151 Ga0207683_10034240 3300026121 Bacteria 4414
152 Ga0207683_10098296 3300026121 Bacteria 2611
153 Ga0207428_10003671 3300027907 Bacteria 14784
154 Ga0207428_10014336 3300027907 Bacteria 6896
155 Ga0268266_10000078 3300028379 Bacteria 213632
156 Ga0268264_10368263 3300028381 Bacteria 1373
157 Ga0307517_10008231 3300028786 Bacteria 14987
158 Ga0307515_10000778 3300028794 Bacteria 73451
159 Ga0307515_10003029 3300028794 Bacteria 35637
160 Ga0307513_10120080 3300031456 Bacteria 2599
161 Ga0307408_100025496 3300031548 Bacteria 4051
162 Ga0307408_100026543 3300031548 Bacteria 3980
163 Ga0307408_100141497 3300031548 Bacteria 1889
164 Ga0307408_100147425 3300031548 Bacteria 1854
165 Ga0307408_100307754 3300031548 Bacteria 1330
166 Ga0307413_10063417 3300031824 Bacteria 2291
167 Ga0307416_100129324 3300032002 Bacteria 2269
168 Ga0307411_10028010 3300032005 Bacteria 3419
169 Ga0307507_10002030 3300033179 Bacteria 43887
170 Ga0307510_10001211 3300033180 Bacteria 27977
171 Ga0395899_0000883 3300037312 Bacteria 28485
172 Ga0395899_0001041 3300037312 Bacteria 25172
173 Ga0395900_0000014 3300037418 Bacteria 386513
174 Ga0395900_0108555 3300037418 Bacteria 2851
175 Ga0395898_0018927 3300037466 Bacteria 7015
176 Ga0395905_0000037 3300037471 Bacteria 261808
177 Ga0395905_0000807 3300037471 Bacteria 41139
178 Ga0395901_0000117 3300038443 Bacteria 105071
179 Ga0395901_0265993 3300038443 Bacteria 1784
180 Ga0436361_0191006 3300039447 Bacteria 14062
181 Ga0439436_0023211 3300041404 Bacteria 1835
182 Ga0439448_0005177 3300042005 Bacteria 3713
183 Ga0450896_012808 3300042133 Bacteria 1189
184 Ga0451577_0240980 3300042876 Bacteria 1636
185 Ga0495638_0001998 3300046460 Bacteria 17407
186 Ga0495650_0010772 3300046471 Bacteria 5077
187 Ga0495650_0028357 3300046471 Bacteria 2572
188 Ga0495585_0007352 3300046492 Bacteria 6751
189 Ga0495648_0006011 3300046524 Bacteria 9966
190 Ga0495622_0023513 3300046557 Bacteria 2874
191 Ga0495633_0000081 3300046558 Bacteria 125903
192 Ga0495668_0000003 3300046616 Bacteria 695023
193 Ga0495625_0000846 3300046660 Bacteria 41815
194 Ga0495625_0006435 3300046660 Bacteria 10456
195 Ga0495625_0007782 3300046660 Bacteria 9252
196 Ga0495625_0036743 3300046660 Bacteria 3598
197 Ga0495625_0121110 3300046660 Bacteria 1780
198 Ga0495683_0021361 3300047323 Bacteria 3336
199 Ga0495687_001036 3300047443 Bacteria 27592
200 Ga0495686_0001641 3300047472 Bacteria 23375
201 Ga0495614_0020403 3300048089 Bacteria 2866
202 Ga0501046_0134167 3300049580 Unclassified 1876
203 Ga0501225_0018845 3300049705 Bacteria 1911
204 Ga0501044_0148011 3300049823 Bacteria 2332
205 nmdc:mga0k408_175_c1 3300050493 Bacteria 32183
206 nmdc:mga05p37_667_c1 3300050507 Bacteria 37896
207 nmdc:mga05p37_7144_c1 3300050507 Bacteria 13169
208 nmdc:mga09592_4417_c1 3300050508 Bacteria 11383
209 nmdc:mga09592_6972_c1 3300050508 Bacteria 9188
210 nmdc:mga0qj67_14593_c1 3300050509 Bacteria 5939
211 nmdc:mga0qj67_15545_c1 3300050509 Bacteria 5763
212 nmdc:mga0qj67_1759_c1 3300050509 Bacteria 15327
213 nmdc:mga0qj67_37858_c1 3300050509 Bacteria 3781
214 nmdc:mga0qj67_58301_c1 3300050509 Bacteria 3061
215 nmdc:mga06r32_259709_c1 3300050510 Bacteria 1725
216 nmdc:mga06r32_527982_c1 3300050510 Bacteria 1155
217 nmdc:mga06r32_7740_c1 3300050510 Bacteria 9662
218 nmdc:mga06r32_98_c1 3300050510 Bacteria 61244
219 nmdc:mga08y16_24216_c1 3300050511 Bacteria 6408
220 nmdc:mga08y16_496_c2 3300050511 Bacteria 35417
221 Ga0500635_0016256 3300053080 Bacteria 2210
222 Ga0500646_0000241 3300053090 Bacteria 16732
223 Ga0500646_0019623 3300053090 Unclassified 1790
224 Ga0500646_0026120 3300053090 Unclassified 1582
225 Ga0500608_003263 3300053122 Bacteria 6046
226 Ga0500617_128325 3300053124 Bacteria 1036
227 Ga0500618_000004 3300053125 Bacteria 293180
228 Ga0500642_0011615 3300053130 Bacteria 3158
229 Ga0500658_0049347 3300053134 Unclassified 1715
230 Ga0500568_0074564 3300053139 Bacteria 1294
231 Ga0500588_0078501 3300053146 Unclassified 1099
232 Ga0500622_0000457 3300053156 Bacteria 38707
233 Ga0500622_0005912 3300053156 Bacteria 7214
234 Ga0500624_000529 3300053157 Bacteria 10921

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031548 Ga0307408_100026543 Ga0307408_1000265432 266
2 3300025913 Ga0207695_10003137 Ga0207695_1000313710 268
3 3300006847 Ga0075431_100204507 Ga0075431_1002045072 280
4 3300006844 Ga0075428_100199815 Ga0075428_1001998152 281
5 3300006846 Ga0075430_100072766 Ga0075430_1000727663 281
6 3300006847 Ga0075431_100085088 Ga0075431_1000850883 281
7 3300050509 nmdc:mga0qj67_15545_c1 nmdc:mga0qj67_15545_c1_4567_5505 281
8 3300050510 nmdc:mga06r32_7740_c1 nmdc:mga06r32_7740_c1_7502_8440 281
9 3300033179 Ga0307507_10002030 Ga0307507_1000203022 282
10 3300003323 rootH1_10129054 rootH1_101290542 284
11 3300006844 Ga0075428_100064402 Ga0075428_1000644022 285
12 3300006846 Ga0075430_100036306 Ga0075430_1000363062 285
13 3300006880 Ga0075429_100040671 Ga0075429_1000406712 285
14 3300009147 Ga0114129_10000564 Ga0114129_100005644 285
15 3300031548 Ga0307408_100141497 Ga0307408_1001414971 285
16 3300031548 Ga0307408_100147425 Ga0307408_1001474252 285
17 3300031824 Ga0307413_10063417 Ga0307413_100634172 285
18 3300050507 nmdc:mga05p37_667_c1 nmdc:mga05p37_667_c1_11750_12685 285
19 3300050508 nmdc:mga09592_4417_c1 nmdc:mga09592_4417_c1_1938_2873 285
20 3300050509 nmdc:mga0qj67_1759_c1 nmdc:mga0qj67_1759_c1_12848_13783 285
21 3300050510 nmdc:mga06r32_527982_c1 nmdc:mga06r32_527982_c1_22_957 285
22 iso_pu_bacteria 2818991444 2819588853 286
23 3300032005 Ga0307411_10028010 Ga0307411_100280102 287
24 3300013307 Ga0157372_10000021 Ga0157372_1000002159 288
25 3300037312 Ga0395899_0001041 Ga0395899_0001041_16816_17712 288
26 iso_pu_bacteria 2738541278 2738727652 288
27 3300003323 rootH1_10078088 rootH1_100780883 292
28 3300006844 Ga0075428_100003235 Ga0075428_10000323518 292
29 3300006846 Ga0075430_100049279 Ga0075430_1000492793 292
30 3300006847 Ga0075431_100000066 Ga0075431_10000006639 292
31 3300006880 Ga0075429_100008018 Ga0075429_1000080183 292
32 3300009093 Ga0105240_10262310 Ga0105240_102623102 292
33 3300009094 Ga0111539_10000583 Ga0111539_1000058327 292
34 3300009147 Ga0114129_10006057 Ga0114129_100060575 292
35 3300025913 Ga0207695_10340453 Ga0207695_103404531 292
36 3300027907 Ga0207428_10003671 Ga0207428_1000367117 292
37 3300049705 Ga0501225_0018845 Ga0501225_0018845_838_1716 292
38 3300050507 nmdc:mga05p37_7144_c1 nmdc:mga05p37_7144_c1_9397_10335 292
39 3300050508 nmdc:mga09592_6972_c1 nmdc:mga09592_6972_c1_2070_3008 292
40 3300050509 nmdc:mga0qj67_37858_c1 nmdc:mga0qj67_37858_c1_859_1797 292
41 3300050510 nmdc:mga06r32_98_c1 nmdc:mga06r32_98_c1_11988_12926 292
42 3300050511 nmdc:mga08y16_496_c2 nmdc:mga08y16_496_c2_12152_13090 292
43 3300053090 Ga0500646_0026120 Ga0500646_0026120_576_1454 292
44 3300053146 Ga0500588_0078501 Ga0500588_0078501_125_1003 292
45 3300005355 Ga0070671_100096881 Ga0070671_1000968812 294
46 3300005455 Ga0070663_100009289 Ga0070663_1000092894 294
47 3300013105 Ga0157369_10000165 Ga0157369_1000016588 294
48 3300025931 Ga0207644_10207775 Ga0207644_102077752 294
49 3300026067 Ga0207678_10027496 Ga0207678_100274964 294
50 3300053090 Ga0500646_0019623 Ga0500646_0019623_248_1132 294
51 3300009147 Ga0114129_10776370 Ga0114129_107763702 295
52 3300050510 nmdc:mga06r32_259709_c1 nmdc:mga06r32_259709_c1_368_1303 295
53 3300003320 rootH2_10025473 rootH2_1002547311 296
54 3300005530 Ga0070679_100147634 Ga0070679_1001476343 296
55 3300006195 Ga0075366_10003785 Ga0075366_100037855 296
56 3300009176 Ga0105242_10306952 Ga0105242_103069521 296
57 3300009545 Ga0105237_10002246 Ga0105237_1000224614 296
58 3300025972 Ga0207668_10391935 Ga0207668_103919352 296
59 3300031456 Ga0307513_10120080 Ga0307513_101200802 296
60 3300041404 Ga0439436_0023211 Ga0439436_0023211_917_1807 296
61 3300046558 Ga0495633_0000081 Ga0495633_0000081_122690_123580 296
62 3300046660 Ga0495625_0007782 Ga0495625_0007782_7980_8870 296
63 3300048089 Ga0495614_0020403 Ga0495614_0020403_975_1865 296
64 3300053090 Ga0500646_0000241 Ga0500646_0000241_9058_9966 296
65 3300053125 Ga0500618_000004 Ga0500618_000004_31426_32316 296
66 3300002737 JGI25162J39368_1000022 JGI25162J39368_1000022195 297
67 3300004803 Ga0058862_12134120 Ga0058862_121341202 297
68 3300005327 Ga0070658_10000019 Ga0070658_1000001975 297
69 3300005336 Ga0070680_100055162 Ga0070680_1000551623 297
70 3300005458 Ga0070681_10006502 Ga0070681_100065027 297
71 3300005530 Ga0070679_100257421 Ga0070679_1002574212 297
72 3300005563 Ga0068855_100034769 Ga0068855_1000347693 297
73 3300005563 Ga0068855_100181114 Ga0068855_1001811143 297
74 3300005563 Ga0068855_100360108 Ga0068855_1003601082 297
75 3300009093 Ga0105240_10046359 Ga0105240_100463593 297
76 3300009093 Ga0105240_10306892 Ga0105240_103068921 297
77 3300009551 Ga0105238_10174471 Ga0105238_101744712 297
78 3300013100 Ga0157373_10004561 Ga0157373_100045615 297
79 3300013102 Ga0157371_10000622 Ga0157371_100006224 297
80 3300013104 Ga0157370_10009907 Ga0157370_1000990711 297
81 3300013105 Ga0157369_10013625 Ga0157369_100136257 297
82 3300013297 Ga0157378_10019516 Ga0157378_100195163 297
83 3300013306 Ga0163162_10000064 Ga0163162_1000006417 297
84 3300013307 Ga0157372_10001155 Ga0157372_1000115511 297
85 3300025233 Ga0209437_100024 Ga0209437_100024509 297
86 3300025909 Ga0207705_10000069 Ga0207705_1000006977 297
87 3300025912 Ga0207707_10013428 Ga0207707_100134285 297
88 3300025913 Ga0207695_10166577 Ga0207695_101665772 297
89 3300025914 Ga0207671_10072461 Ga0207671_100724611 297
90 3300025914 Ga0207671_10347925 Ga0207671_103479252 297
91 3300025917 Ga0207660_10010752 Ga0207660_100107525 297
92 3300025921 Ga0207652_10024132 Ga0207652_100241322 297
93 3300025949 Ga0207667_10009667 Ga0207667_100096678 297
94 3300025949 Ga0207667_10048519 Ga0207667_100485192 297
95 3300033180 Ga0307510_10001211 Ga0307510_100012118 297
96 3300046492 Ga0495585_0007352 Ga0495585_0007352_2199_3092 297
97 3300046524 Ga0495648_0006011 Ga0495648_0006011_2737_3630 297
98 3300046557 Ga0495622_0023513 Ga0495622_0023513_1365_2258 297
99 3300046616 Ga0495668_0000003 Ga0495668_0000003_681475_682368 297
100 3300046660 Ga0495625_0000846 Ga0495625_0000846_35279_36172 297
101 3300053122 Ga0500608_003263 Ga0500608_003263_1716_2609 297
102 3300053130 Ga0500642_0011615 Ga0500642_0011615_435_1328 297
103 3300053156 Ga0500622_0000457 Ga0500622_0000457_30513_31412 297
104 iso_pu_bacteria 2881955468 2881957791 297
105 3300006846 Ga0075430_100069916 Ga0075430_1000699162 298
106 3300031548 Ga0307408_100307754 Ga0307408_1003077542 298
107 3300032002 Ga0307416_100129324 Ga0307416_1001293241 298
108 3300050509 nmdc:mga0qj67_58301_c1 nmdc:mga0qj67_58301_c1_1487_2431 298
109 iso_pu_bacteria 2946033335 2946034652 299
110 iso_pu_bacteria 2919395869 2919398555 300
111 iso_pu_bacteria 2739367866 2740033977 301
112 iso_pu_bacteria 2919437846 2919441659 302
113 3300005563 Ga0068855_100029999 Ga0068855_1000299992 303
114 3300013307 Ga0157372_10002338 Ga0157372_100023385 303
115 3300025904 Ga0207647_10026398 Ga0207647_100263982 303
116 3300049823 Ga0501044_0148011 Ga0501044_0148011_683_1594 303
117 3300003322 rootL2_10173794 rootL2_101737942 304
118 3300006846 Ga0075430_100012628 Ga0075430_1000126284 304
119 3300050509 nmdc:mga0qj67_14593_c1 nmdc:mga0qj67_14593_c1_1275_2201 304
120 iso_pu_bacteria 2977232053 2977232538 304
121 3300005295 Ga0065707_10098106 Ga0065707_100981062 305
122 3300005456 Ga0070678_100023883 Ga0070678_1000238833 305
123 3300011119 Ga0105246_10211105 Ga0105246_102111051 305
124 3300013296 Ga0157374_10065122 Ga0157374_100651221 305
125 3300013307 Ga0157372_10081723 Ga0157372_100817234 305
126 3300014326 Ga0157380_10002259 Ga0157380_100022593 305
127 3300026121 Ga0207683_10098296 Ga0207683_100982962 305
128 3300042876 Ga0451577_0240980 Ga0451577_0240980_370_1347 305
129 3300046460 Ga0495638_0001998 Ga0495638_0001998_6992_7960 305
130 3300046471 Ga0495650_0028357 Ga0495650_0028357_375_1301 305
131 3300046660 Ga0495625_0006435 Ga0495625_0006435_6372_7340 305
132 3300053124 Ga0500617_128325 Ga0500617_128325_87_1025 305
133 3300003322 rootL2_10249449 rootL2_102494492 306
134 3300005548 Ga0070665_100000003 Ga0070665_100000003336 306
135 3300005719 Ga0068861_100211426 Ga0068861_1002114262 306
136 3300006948 Ga0099826_10144825 Ga0099826_101448251 306
137 3300009094 Ga0111539_10011812 Ga0111539_100118125 306
138 3300025913 Ga0207695_10099608 Ga0207695_100996083 306
139 3300025949 Ga0207667_10081701 Ga0207667_100817012 306
140 3300027907 Ga0207428_10014336 Ga0207428_100143364 306
141 3300028379 Ga0268266_10000078 Ga0268266_10000078126 306
142 3300028381 Ga0268264_10368263 Ga0268264_103682632 306
143 3300028786 Ga0307517_10008231 Ga0307517_1000823110 306
144 3300042133 Ga0450896_012808 Ga0450896_012808_115_1056 306
145 3300050511 nmdc:mga08y16_24216_c1 nmdc:mga08y16_24216_c1_3913_4887 306
146 3300053134 Ga0500658_0049347 Ga0500658_0049347_586_1527 306
147 3300053156 Ga0500622_0005912 Ga0500622_0005912_2252_3199 306
148 3300003316 rootH1_10161124 rootH1_101611241 307
149 3300005539 Ga0068853_100050520 Ga0068853_1000505202 307
150 3300005614 Ga0068856_100002099 Ga0068856_1000020994 307
151 3300009545 Ga0105237_10164798 Ga0105237_101647982 307
152 3300010375 Ga0105239_10048984 Ga0105239_100489842 307
153 3300013296 Ga0157374_10006545 Ga0157374_100065457 307
154 3300013308 Ga0157375_10085927 Ga0157375_100859272 307
155 3300025914 Ga0207671_10001726 Ga0207671_100017269 307
156 3300025921 Ga0207652_10275515 Ga0207652_102755151 307
157 3300025949 Ga0207667_10666722 Ga0207667_106667221 307
158 3300026078 Ga0207702_10413706 Ga0207702_104137061 307
159 3300028794 Ga0307515_10000778 Ga0307515_1000077842 307
160 3300028794 Ga0307515_10003029 Ga0307515_1000302927 307
161 3300037312 Ga0395899_0000883 Ga0395899_0000883_26692_27615 307
162 3300037418 Ga0395900_0000014 Ga0395900_0000014_134366_135289 307
163 3300037418 Ga0395900_0108555 Ga0395900_0108555_531_1469 307
164 3300037466 Ga0395898_0018927 Ga0395898_0018927_3776_4699 307
165 3300037471 Ga0395905_0000037 Ga0395905_0000037_134356_135279 307
166 3300037471 Ga0395905_0000807 Ga0395905_0000807_21353_22291 307
167 3300038443 Ga0395901_0000117 Ga0395901_0000117_48013_48936 307
168 3300038443 Ga0395901_0265993 Ga0395901_0265993_624_1562 307
169 3300046471 Ga0495650_0010772 Ga0495650_0010772_1256_2218 307
170 3300047443 Ga0495687_001036 Ga0495687_001036_9777_10700 307
171 3300047472 Ga0495686_0001641 Ga0495686_0001641_7488_8411 307
172 3300049580 Ga0501046_0134167 Ga0501046_0134167_140_1090 307
173 3300050493 nmdc:mga0k408_175_c1 nmdc:mga0k408_175_c1_13689_14612 307
174 3300053080 Ga0500635_0016256 Ga0500635_0016256_1003_1929 307
175 3300053139 Ga0500568_0074564 Ga0500568_0074564_136_1086 307
176 3300001904 JGI24736J21556_1021933 JGI24736J21556_10219331 308
177 3300001990 JGI24737J22298_10003403 JGI24737J22298_100034034 308
178 3300001990 JGI24737J22298_10037078 JGI24737J22298_100370782 308
179 3300003322 rootL2_10087063 rootL2_100870633 308
180 3300005328 Ga0070676_10000165 Ga0070676_1000016514 308
181 3300005339 Ga0070660_100037245 Ga0070660_1000372453 308
182 3300005364 Ga0070673_100005148 Ga0070673_1000051484 308
183 3300005366 Ga0070659_100007956 Ga0070659_1000079564 308
184 3300005456 Ga0070678_100004801 Ga0070678_1000048013 308
185 3300005457 Ga0070662_100000185 Ga0070662_10000018518 308
186 3300005457 Ga0070662_100120766 Ga0070662_1001207662 308
187 3300005459 Ga0068867_100001301 Ga0068867_1000013017 308
188 3300005539 Ga0068853_100020998 Ga0068853_1000209985 308
189 3300005539 Ga0068853_100021250 Ga0068853_1000212502 308
190 3300005543 Ga0070672_100064160 Ga0070672_1000641602 308
191 3300005563 Ga0068855_100000196 Ga0068855_10000019629 308
192 3300005614 Ga0068856_100504918 Ga0068856_1005049181 308
193 3300005616 Ga0068852_100000372 Ga0068852_10000037220 308
194 3300005617 Ga0068859_100022722 Ga0068859_1000227222 308
195 3300005844 Ga0068862_100277991 Ga0068862_1002779912 308
196 3300006237 Ga0097621_100000054 Ga0097621_10000005434 308
197 3300006358 Ga0068871_100000145 Ga0068871_10000014514 308
198 3300006881 Ga0068865_100000051 Ga0068865_10000005122 308
199 3300006931 Ga0097620_100022722 Ga0097620_1000227226 308
200 3300009174 Ga0105241_10038169 Ga0105241_100381693 308
201 3300009174 Ga0105241_10537889 Ga0105241_105378891 308
202 3300009176 Ga0105242_10039325 Ga0105242_100393252 308
203 3300009545 Ga0105237_10001447 Ga0105237_1000144731 308
204 3300009545 Ga0105237_10071602 Ga0105237_100716023 308
205 3300009545 Ga0105237_10072705 Ga0105237_100727052 308
206 3300010375 Ga0105239_10000005 Ga0105239_10000005169 308
207 3300010375 Ga0105239_10009550 Ga0105239_100095501 308
208 3300010375 Ga0105239_10011559 Ga0105239_100115592 308
209 3300010375 Ga0105239_10113934 Ga0105239_101139342 308
210 3300013100 Ga0157373_10033925 Ga0157373_100339252 308
211 3300013104 Ga0157370_10378527 Ga0157370_103785271 308
212 3300013105 Ga0157369_10039468 Ga0157369_100394682 308
213 3300013296 Ga0157374_10001618 Ga0157374_1000161810 308
214 3300013296 Ga0157374_10005445 Ga0157374_100054455 308
215 3300013297 Ga0157378_10035019 Ga0157378_100350192 308
216 3300013307 Ga0157372_10166220 Ga0157372_101662202 308
217 3300014969 Ga0157376_10146641 Ga0157376_101466412 308
218 3300021361 Ga0213872_10040897 Ga0213872_100408972 308
219 3300025904 Ga0207647_10000093 Ga0207647_1000009321 308
220 3300025904 Ga0207647_10000494 Ga0207647_100004944 308
221 3300025907 Ga0207645_10000652 Ga0207645_100006526 308
222 3300025914 Ga0207671_10040067 Ga0207671_100400672 308
223 3300025914 Ga0207671_10071550 Ga0207671_100715502 308
224 3300025919 Ga0207657_10071997 Ga0207657_100719972 308
225 3300025932 Ga0207690_10007623 Ga0207690_100076234 308
226 3300025933 Ga0207706_10000243 Ga0207706_1000024317 308
227 3300025933 Ga0207706_10131131 Ga0207706_101311312 308
228 3300025938 Ga0207704_10000046 Ga0207704_1000004621 308
229 3300025949 Ga0207667_10000037 Ga0207667_1000003728 308
230 3300025960 Ga0207651_10078485 Ga0207651_100784852 308
231 3300026041 Ga0207639_10006017 Ga0207639_100060174 308
232 3300026041 Ga0207639_10438232 Ga0207639_104382321 308
233 3300026078 Ga0207702_10047398 Ga0207702_100473982 308
234 3300026089 Ga0207648_10000257 Ga0207648_1000025755 308
235 3300026121 Ga0207683_10034240 Ga0207683_100342402 308
236 3300031548 Ga0307408_100025496 Ga0307408_1000254965 308
237 3300039447 Ga0436361_0191006 Ga0436361_0191006_6665_7591 308
238 3300042005 Ga0439448_0005177 Ga0439448_0005177_1915_2841 308
239 3300046660 Ga0495625_0036743 Ga0495625_0036743_302_1228 308
240 3300046660 Ga0495625_0121110 Ga0495625_0121110_663_1589 308
241 3300047323 Ga0495683_0021361 Ga0495683_0021361_803_1729 308
242 3300053157 Ga0500624_000529 Ga0500624_000529_5824_6756 308

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19420

DDAH_eukar

N,N dimethylarginine dimethylhydrolase, eukaryotic

41

330

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6juy-assembly1.cif.gz_D crystal structure of argz, apo structure, an arginine dihydrolase from the ornithine-ammonia cycle in cyanobacteria 0.8654 9 302
6juy-assembly1.cif.gz_B crystal structure of argz, apo structure, an arginine dihydrolase from the ornithine-ammonia cycle in cyanobacteria 0.8575 9 305
6juy-assembly1.cif.gz_C crystal structure of argz, apo structure, an arginine dihydrolase from the ornithine-ammonia cycle in cyanobacteria 0.8539 9 305
6juy-assembly1.cif.gz_A crystal structure of argz, apo structure, an arginine dihydrolase from the ornithine-ammonia cycle in cyanobacteria 0.8462 9 305
6jv0-assembly1.cif.gz_A crystal structure of n-terminal domain of argz, bound to product, an arginine dihydrolase from the ornithine-ammonia cycle in cyanobacteria 0.8447 9 305
ID Description Score Start End Superfamily
af_Q86KZ6_15_316_3.75.10.10 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.9512 15 298 3.75.10.10
af_Q86KZ6_15_316_3.75.10.10 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.8923 15 298 3.75.10.10
af_Q4D5L9_1_215_3.75.10.10 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.8886 123 295 3.75.10.10
af_A0A7I9BCB0_10_272_3.75.10.10 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.8509 1 302 3.75.10.10
af_A0A7I9BCB0_10_272_3.75.10.10 Alpha Beta;5-stranded Propeller;L-arginine/glycine Amidinotransferase; Chain A;L-arginine/glycine Amidinotransferase; Chain A 0.8479 1 302 3.75.10.10
ID Description Score Start End GO Terms
AF-A0A520DLR0-F1-model_v4 Amidinotransferase 1 58 307 GO:0016740
AF-A0A519X4V2-F1-model_v4 Amidinotransferase 0.9983 187 304 GO:0016740
AF-A0A348VB39-F1-model_v4 Amidinotransferase 0.9958 133 302 GO:0016740
AF-A0A7W1KSV6-F1-model_v4 Amidinotransferase 0.9944 64 306 GO:0016740
AF-A0A401U6S9-F1-model_v4 Amidinotransferase 0.994 12 307 GO:0016740

Feature Viewer

pLDDT pTM Quality
92.95 0.91 High
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Predicted Structure (AlphaFold2)

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