F354178

General Info

Members Datasets Scaffolds Average Seq Length
241 175 478 467

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0000426|Ga0500616_0000426_41932_43350
Length 472
Sequence MAKNLQEVLDANGGDAVDLLRNSQIGSYIYPVVPSDFHNWIKETNAWRTTAVLYDQSHHMDNVFLKGSDAIKLIERTAINSVENFPVDKAKQYVPTTAAGHVIGDGILFREAEDEYVYVGRAPASNWLMYHGETGGYSNLDITVDRRSPSRPYGDQVNRKYWRFQIQGPAAWSVIEKLNGGPVEQLKFFNMSTLTIGGIQVRTLRHGMAGAPGLELWGPYGENGANHHRIRDLIVAAGAEFGMLQVGSRAYPANTLESGWIPSPLPAIYTGAEERGYREWLPADSYEATGTLAGSFVGKSIEDYYLTPWELGYGSFVKFDHDFIGADALKEIDPASQRKKVTLEWNAEDLGKVWTSLLNVDGPRYKYFDLPLANYGSANYDSVIDADGNVVGYSMFTGYAANERRGLSLGTVNPDVPVGAEVKIVWGESPNTSKAAVEPHEQFEVRAVVSPVPYSTVARETYTGGWRTGYTA

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
11 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
30 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
31 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
50 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
51 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
52 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
53 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
54 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
55 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
56 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
57 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
58 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
59 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
60 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
61 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
65 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
66 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
72 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
73 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
74 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
75 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
76 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
77 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
78 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
79 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
80 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
81 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
82 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
83 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
84 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
85 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
86 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
90 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
91 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
92 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
93 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
94 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
95 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
98 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
99 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
100 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
101 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
104 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
105 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
106 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
107 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
108 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
118 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
119 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
120 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
121 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
122 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
123 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
124 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
147 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
148 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
149 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
150 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
151 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
152 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
153 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
154 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
155 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
156 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
157 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
158 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
159 3300060344 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 36R_AW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 2643221546 Microbacterium sp. Root53 Isolate Unclassified
162 2643221575 Microbacterium sp. Root61 Isolate Unclassified
163 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
164 2808606372 Agromyces sp. 23-23 Isolate Unclassified
165 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
166 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
167 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
168 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
169 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
170 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
171 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
172 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
173 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
174 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
175 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.29
Metatranscriptomes 0.41
Isolates 8.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.96
Nodule 0
Rhizoplane 3.73
Rhizosphere 69.71
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0000426 3300053153 Bacteria 56192
2 Ga0070658_10065493 3300005327 Bacteria 2966
3 Ga0068868_100114269 3300005338 Bacteria 2196
4 Ga0070660_100164923 3300005339 Bacteria 1787
5 Ga0070691_10018988 3300005341 Bacteria 3168
6 Ga0070694_100107577 3300005444 Bacteria 1982
7 Ga0070663_100129661 3300005455 Bacteria 1914
8 Ga0070681_10067811 3300005458 Bacteria 3535
9 Ga0070707_100279136 3300005468 Bacteria 1624
10 Ga0068853_100028719 3300005539 Bacteria 4681
11 Ga0070695_100083134 3300005545 Bacteria 2121
12 Ga0070665_100008460 3300005548 Bacteria 10408
13 Ga0068854_100120661 3300005578 Bacteria 1990
14 Ga0068856_100012839 3300005614 Bacteria 8106
15 Ga0068852_100150815 3300005616 Bacteria 2161
16 Ga0068866_10072304 3300005718 Bacteria 1827
17 Ga0068863_100108702 3300005841 Bacteria 2639
18 Ga0081540_1055009 3300005983 Bacteria 1941
19 Ga0081539_10001940 3300005985 Bacteria 31709
20 Ga0075365_10005471 3300006038 Bacteria 6851
21 Ga0075364_10022122 3300006051 Bacteria 4012
22 Ga0075364_10026036 3300006051 Bacteria 3728
23 Ga0075364_10094239 3300006051 Bacteria 1989
24 Ga0070716_100032442 3300006173 Bacteria 2849
25 Ga0070712_100081138 3300006175 Bacteria 2349
26 Ga0075369_10002904 3300006186 Bacteria 6186
27 Ga0075369_10012182 3300006186 Bacteria 3395
28 Ga0111539_10035348 3300009094 Bacteria 6050
29 Ga0111539_10140524 3300009094 Bacteria 2827
30 Ga0105239_10144104 3300010375 Bacteria 2656
31 Ga0105246_10002005 3300011119 Bacteria 12294
32 Ga0105246_10072382 3300011119 Bacteria 2430
33 Ga0157370_10152097 3300013104 Bacteria 2153
34 Ga0157377_10083377 3300014745 Bacteria 1873
35 Ga0157376_10116943 3300014969 Bacteria 2357
36 Ga0213874_10000341 3300021377 Bacteria 9213
37 Ga0213876_10027328 3300021384 Bacteria 3012
38 Ga0209148_1002873 3300025254 Bacteria 5284
39 Ga0209148_1003158 3300025254 Bacteria 4750
40 Ga0207647_10010713 3300025904 Bacteria 6458
41 Ga0207699_10020888 3300025906 Bacteria 3518
42 Ga0207693_10000657 3300025915 Bacteria 31001
43 Ga0207657_10104667 3300025919 Bacteria 2344
44 Ga0207700_10057257 3300025928 Bacteria 2938
45 Ga0207700_10110626 3300025928 Bacteria 2210
46 Ga0207664_10081365 3300025929 Bacteria 2635
47 Ga0207670_10142786 3300025936 Bacteria 1767
48 Ga0207665_10024047 3300025939 Bacteria 4015
49 Ga0207665_10056568 3300025939 Bacteria 2648
50 Ga0207689_10183941 3300025942 Bacteria 1723
51 Ga0207640_10098998 3300025981 Bacteria 2040
52 Ga0207678_10218274 3300026067 Bacteria 1632
53 Ga0207702_10007871 3300026078 Bacteria 9035
54 Ga0207674_10116859 3300026116 Bacteria 2638
55 Ga0207675_100062096 3300026118 Bacteria 3489
56 Ga0268266_10031677 3300028379 Bacteria 4491
57 Ga0307515_10040764 3300028794 Bacteria 7330
58 Ga0307515_10066665 3300028794 Bacteria 4982
59 Ga0307515_10081290 3300028794 Bacteria 4211
60 Ga0307513_10027677 3300031456 Bacteria 6503
61 Ga0307408_100176300 3300031548 Bacteria 1711
62 Ga0307516_10003993 3300031730 Bacteria 18515
63 Ga0307405_10114614 3300031731 Bacteria 1832
64 Ga0307405_10150061 3300031731 Bacteria 1638
65 Ga0307413_10073535 3300031824 Bacteria 2161
66 Ga0307410_10030418 3300031852 Bacteria 3451
67 Ga0307410_10131021 3300031852 Bacteria 1842
68 Ga0307406_10008890 3300031901 Bacteria 5614
69 Ga0307406_10071915 3300031901 Bacteria 2268
70 Ga0307406_10097704 3300031901 Bacteria 1992
71 Ga0307407_10032522 3300031903 Bacteria 2837
72 Ga0307407_10085153 3300031903 Bacteria 1922
73 Ga0307409_100007400 3300031995 Bacteria 6565
74 Ga0307416_100024075 3300032002 Bacteria 4434
75 Ga0307416_100097600 3300032002 Bacteria 2545
76 Ga0307414_10068176 3300032004 Bacteria 2552
77 Ga0307411_10049506 3300032005 Bacteria 2731
78 Ga0307415_100024945 3300032126 Bacteria 3744
79 Ga0307415_100035690 3300032126 Bacteria 3249
80 Ga0373923_0066989 3300035111 Bacteria 1535
81 Ga0373946_0033924 3300035171 Bacteria 2057
82 Ga0373935_0029503 3300035692 Bacteria 3395
83 Ga0373947_0136213 3300035725 Bacteria 1571
84 Ga0395900_0024191 3300037418 Bacteria 6218
85 Ga0395900_0029325 3300037418 Bacteria 5645
86 Ga0395898_0001780 3300037466 Bacteria 28036
87 Ga0395905_0281223 3300037471 Bacteria 1550
88 Ga0395901_0001312 3300038443 Bacteria 26230
89 Ga0395901_0008126 3300038443 Bacteria 10596
90 Ga0395901_0116870 3300038443 Bacteria 2802
91 Ga0436365_1030415 3300039437 Bacteria 5586
92 Ga0436363_0016147 3300039450 Bacteria 23431
93 Ga0436363_0739900 3300039450 Bacteria 3092
94 Ga0439436_0002573 3300041404 Bacteria 5456
95 Ga0439439_0020762 3300041406 Bacteria 1634
96 Ga0439465_0025362 3300041413 Bacteria 1871
97 Ga0439433_0011824 3300041999 Bacteria 1913
98 Ga0439442_000031 3300042002 Bacteria 33018
99 Ga0439442_000219 3300042002 Bacteria 14184
100 Ga0439442_000247 3300042002 Bacteria 13206
101 Ga0439449_0004623 3300042007 Bacteria 5318
102 Ga0439449_0012374 3300042007 Bacteria 3208
103 Ga0439449_0046045 3300042007 Bacteria 1616
104 Ga0439457_018638 3300042014 Bacteria 1542
105 Ga0450920_000297 3300042122 Bacteria 7540
106 Ga0450907_000292 3300042146 Bacteria 16874
107 Ga0450908_016407 3300042184 Bacteria 1321
108 Ga0439434_0000012 3300042435 Bacteria 46644
109 Ga0450918_000593 3300042531 Bacteria 7760
110 Ga0466969_0005589 3300044656 Bacteria 6681
111 Ga0466963_0061860 3300044694 Bacteria 2504
112 Ga0466959_0002881 3300045049 Bacteria 11096
113 Ga0466959_0046717 3300045049 Bacteria 3186
114 Ga0466967_0008269 3300045976 Bacteria 7602
115 Ga0466967_0025081 3300045976 Bacteria 4911
116 Ga0466967_0080475 3300045976 Bacteria 2940
117 Ga0495641_0065215 3300046461 Bacteria 1639
118 Ga0495651_0049213 3300046462 Bacteria 3253
119 Ga0495651_0057409 3300046462 Bacteria 2988
120 Ga0495653_0019765 3300046463 Bacteria 5461
121 Ga0495639_0055539 3300046475 Bacteria 1807
122 Ga0495608_0011158 3300046511 Bacteria 6254
123 Ga0495608_0017353 3300046511 Bacteria 4980
124 Ga0495630_0059782 3300046517 Bacteria 2860
125 Ga0495652_0011220 3300046529 Bacteria 8112
126 Ga0495645_0057166 3300046543 Bacteria 2832
127 Ga0495667_0021425 3300046559 Bacteria 4361
128 Ga0495635_0005528 3300046663 Bacteria 8792
129 Ga0495657_0002535 3300046675 Bacteria 15314
130 Ga0495646_0028612 3300046680 Bacteria 3488
131 Ga0495613_0002769 3300046689 Bacteria 13167
132 Ga0495613_0056275 3300046689 Bacteria 2888
133 Ga0495613_0213621 3300046689 Bacteria 1356
134 Ga0495604_0012705 3300047317 Bacteria 6700
135 Ga0495674_0004705 3300047319 Bacteria 13130
136 Ga0495676_0147211 3300047321 Bacteria 1681
137 Ga0495680_0004879 3300047322 Bacteria 12704
138 Ga0495684_0005341 3300047471 Bacteria 10001
139 Ga0495593_0042377 3300047673 Bacteria 2443
140 Ga0495602_0005396 3300048088 Bacteria 13409
141 Ga0495602_0063939 3300048088 Bacteria 3185
142 Ga0496105_0113876 3300048908 Bacteria 2231
143 Ga0496105_0166735 3300048908 Bacteria 1807
144 Ga0496109_0125074 3300048912 Bacteria 2397
145 Ga0496110_0029586 3300048913 Bacteria 4716
146 Ga0496112_0008814 3300048915 Bacteria 9054
147 Ga0496112_0031237 3300048915 Bacteria 5164
148 Ga0496112_0121563 3300048915 Bacteria 2581
149 Ga0496113_0007986 3300048916 Bacteria 6858
150 Ga0496115_0090431 3300048918 Bacteria 2501
151 Ga0496117_0007467 3300048920 Bacteria 10667
152 Ga0496117_0007484 3300048920 Bacteria 10648
153 Ga0496118_0078953 3300048921 Bacteria 2325
154 Ga0496118_0095077 3300048921 Bacteria 2035
155 Ga0496119_0001415 3300048922 Bacteria 29056
156 Ga0496119_0002926 3300048922 Bacteria 18195
157 Ga0496119_0023090 3300048922 Bacteria 4426
158 Ga0496120_0002412 3300048923 Bacteria 18988
159 Ga0496120_0015925 3300048923 Bacteria 4936
160 Ga0496121_0104813 3300048924 Bacteria 2172
161 Ga0496122_0000071 3300048925 Bacteria 222537
162 Ga0496122_0000460 3300048925 Bacteria 84748
163 Ga0496123_0000006 3300048926 Bacteria 647258
164 Ga0496123_0000802 3300048926 Bacteria 50829
165 Ga0496123_0032529 3300048926 Bacteria 3774
166 Ga0496124_0003591 3300048927 Bacteria 18848
167 Ga0496124_0097278 3300048927 Bacteria 2390
168 Ga0496125_0072307 3300048928 Bacteria 2688
169 Ga0496126_0014990 3300048929 Bacteria 7815
170 Ga0496126_0040203 3300048929 Bacteria 4336
171 Ga0501033_0092963 3300049570 Bacteria 2206
172 Ga0501034_0113698 3300049571 Bacteria 2696
173 Ga0501036_0026749 3300049572 Bacteria 4873
174 Ga0501038_0020508 3300049574 Bacteria 5939
175 Ga0501039_0017851 3300049575 Bacteria 5444
176 Ga0501039_0094471 3300049575 Bacteria 2331
177 Ga0501040_0003598 3300049576 Bacteria 10022
178 Ga0501042_0001382 3300049578 Bacteria 14244
179 Ga0501043_0032217 3300049579 Bacteria 4120
180 Ga0501047_0002509 3300049581 Bacteria 17498
181 Ga0501048_0013262 3300049582 Bacteria 6116
182 Ga0501067_0025074 3300049583 Bacteria 3307
183 Ga0501067_0032222 3300049583 Bacteria 2909
184 Ga0501069_0011256 3300049585 Bacteria 4744
185 Ga0501070_0004173 3300049586 Bacteria 12436
186 Ga0501073_0000015 3300049589 Bacteria 157300
187 Ga0501073_0001325 3300049589 Bacteria 18227
188 Ga0501073_0132782 3300049589 Bacteria 1726
189 Ga0501075_0050192 3300049591 Bacteria 3136
190 Ga0501079_0027386 3300049741 Bacteria 4370
191 Ga0501079_0052679 3300049741 Bacteria 3140
192 Ga0501080_0003872 3300049742 Bacteria 13239
193 Ga0501081_0008343 3300049743 Bacteria 6723
194 Ga0501083_0000109 3300049744 Bacteria 55679
195 Ga0501083_0053687 3300049744 Bacteria 2705
196 Ga0501035_0003330 3300049822 Bacteria 15398
197 Ga0501035_0025420 3300049822 Bacteria 5429
198 Ga0501044_0004127 3300049823 Bacteria 16299
199 Ga0501044_0174368 3300049823 Bacteria 2120
200 nmdc:mga00v17_3282_c1 3300050491 Bacteria 8337
201 nmdc:mga0yw44_5297_c1 3300050492 Bacteria 6062
202 nmdc:mga0rr50_124848_c1 3300050513 Bacteria 2053
203 nmdc:mga0a205_69108_c1 3300050515 Bacteria 3411
204 nmdc:mga0sz30_14769_c1 3300050516 Bacteria 3080
205 nmdc:mga0sz30_27842_c1 3300050516 Bacteria 2323
206 Ga0495595_0005489 3300053084 Bacteria 5138
207 Ga0495619_0012001 3300053085 Bacteria 5458
208 Ga0500647_0000425 3300053091 Bacteria 11075
209 Ga0500556_0000140 3300053104 Bacteria 60381
210 Ga0500556_0000163 3300053104 Bacteria 54246
211 Ga0500562_000303 3300053108 Bacteria 12023
212 Ga0500562_004999 3300053108 Bacteria 3336
213 Ga0500572_000073 3300053111 Bacteria 31908
214 Ga0500655_000683 3300053133 Bacteria 6739
215 Ga0500655_003440 3300053133 Bacteria 2859
216 Ga0500559_0000156 3300053136 Bacteria 53941
217 Ga0500559_0000513 3300053136 Bacteria 27259
218 Ga0587071_011130 3300060344 Bacteria 1514
219 Ga0501082_0096084 3300060353 Bacteria 2561
220 2643753165 2643221546 Bacteria 2910897
221 2643887832 2643221575 Bacteria 4022601
222 2643887882 2643221575 Bacteria 4022601
223 2808877113 2808606366 Bacteria 4415912
224 2808900667 2808606372 Bacteria 4649509
225 2808900686 2808606372 Bacteria 4649509
226 2809226057 2808606447 Bacteria 3572005
227 2812322310 2811994872 Bacteria 4121241
228 2852632347 2852632344 Bacteria 3463163
229 2897563801 2897561785 Bacteria 3256946
230 2906801061 2906799679 Bacteria 4031749
231 2919052706 2919051321 Bacteria 4210889
232 2939601791 2939598168 Bacteria 4687164
233 2939601798 2939598168 Bacteria 4687164
234 2945945337 2945941187 Bacteria 4682474
235 2945945347 2945941187 Bacteria 4682474
236 2945969490 2945968032 Bacteria 4111363
237 8054108908 8054107350 Bacteria 5022511
238 8054108915 8054107350 Bacteria 5022511
239 8055034673 8055034563 Bacteria 3562128
240 Ga0500616_0000426
241 Ga0070658_10065493
242 Ga0068868_100114269
243 Ga0070660_100164923
244 Ga0070691_10018988
245 Ga0070694_100107577
246 Ga0070663_100129661
247 Ga0070681_10067811
248 Ga0070707_100279136
249 Ga0068853_100028719
250 Ga0070695_100083134
251 Ga0070665_100008460
252 Ga0068854_100120661
253 Ga0068856_100012839
254 Ga0068852_100150815
255 Ga0068866_10072304
256 Ga0068863_100108702
257 Ga0081540_1055009
258 Ga0081539_10001940
259 Ga0075365_10005471
260 Ga0075364_10022122
261 Ga0075364_10026036
262 Ga0075364_10094239
263 Ga0070716_100032442
264 Ga0070712_100081138
265 Ga0075369_10002904
266 Ga0075369_10012182
267 Ga0111539_10035348
268 Ga0111539_10140524
269 Ga0105239_10144104
270 Ga0105246_10002005
271 Ga0105246_10072382
272 Ga0157370_10152097
273 Ga0157377_10083377
274 Ga0157376_10116943
275 Ga0213874_10000341
276 Ga0213876_10027328
277 Ga0209148_1002873
278 Ga0209148_1003158
279 Ga0207647_10010713
280 Ga0207699_10020888
281 Ga0207693_10000657
282 Ga0207657_10104667
283 Ga0207700_10057257
284 Ga0207700_10110626
285 Ga0207664_10081365
286 Ga0207670_10142786
287 Ga0207665_10024047
288 Ga0207665_10056568
289 Ga0207689_10183941
290 Ga0207640_10098998
291 Ga0207678_10218274
292 Ga0207702_10007871
293 Ga0207674_10116859
294 Ga0207675_100062096
295 Ga0268266_10031677
296 Ga0307515_10040764
297 Ga0307515_10066665
298 Ga0307515_10081290
299 Ga0307513_10027677
300 Ga0307408_100176300
301 Ga0307516_10003993
302 Ga0307405_10114614
303 Ga0307405_10150061
304 Ga0307413_10073535
305 Ga0307410_10030418
306 Ga0307410_10131021
307 Ga0307406_10008890
308 Ga0307406_10071915
309 Ga0307406_10097704
310 Ga0307407_10032522
311 Ga0307407_10085153
312 Ga0307409_100007400
313 Ga0307416_100024075
314 Ga0307416_100097600
315 Ga0307414_10068176
316 Ga0307411_10049506
317 Ga0307415_100024945
318 Ga0307415_100035690
319 Ga0373923_0066989
320 Ga0373946_0033924
321 Ga0373935_0029503
322 Ga0373947_0136213
323 Ga0395900_0024191
324 Ga0395900_0029325
325 Ga0395898_0001780
326 Ga0395905_0281223
327 Ga0395901_0001312
328 Ga0395901_0008126
329 Ga0395901_0116870
330 Ga0436365_1030415
331 Ga0436363_0016147
332 Ga0436363_0739900
333 Ga0439436_0002573
334 Ga0439439_0020762
335 Ga0439465_0025362
336 Ga0439433_0011824
337 Ga0439442_000031
338 Ga0439442_000219
339 Ga0439442_000247
340 Ga0439449_0004623
341 Ga0439449_0012374
342 Ga0439449_0046045
343 Ga0439457_018638
344 Ga0450920_000297
345 Ga0450907_000292
346 Ga0450908_016407
347 Ga0439434_0000012
348 Ga0450918_000593
349 Ga0466969_0005589
350 Ga0466963_0061860
351 Ga0466959_0002881
352 Ga0466959_0046717
353 Ga0466967_0008269
354 Ga0466967_0025081
355 Ga0466967_0080475
356 Ga0495641_0065215
357 Ga0495651_0049213
358 Ga0495651_0057409
359 Ga0495653_0019765
360 Ga0495639_0055539
361 Ga0495608_0011158
362 Ga0495608_0017353
363 Ga0495630_0059782
364 Ga0495652_0011220
365 Ga0495645_0057166
366 Ga0495667_0021425
367 Ga0495635_0005528
368 Ga0495657_0002535
369 Ga0495646_0028612
370 Ga0495613_0002769
371 Ga0495613_0056275
372 Ga0495613_0213621
373 Ga0495604_0012705
374 Ga0495674_0004705
375 Ga0495676_0147211
376 Ga0495680_0004879
377 Ga0495684_0005341
378 Ga0495593_0042377
379 Ga0495602_0005396
380 Ga0495602_0063939
381 Ga0496105_0113876
382 Ga0496105_0166735
383 Ga0496109_0125074
384 Ga0496110_0029586
385 Ga0496112_0008814
386 Ga0496112_0031237
387 Ga0496112_0121563
388 Ga0496113_0007986
389 Ga0496115_0090431
390 Ga0496117_0007467
391 Ga0496117_0007484
392 Ga0496118_0078953
393 Ga0496118_0095077
394 Ga0496119_0001415
395 Ga0496119_0002926
396 Ga0496119_0023090
397 Ga0496120_0002412
398 Ga0496120_0015925
399 Ga0496121_0104813
400 Ga0496122_0000071
401 Ga0496122_0000460
402 Ga0496123_0000006
403 Ga0496123_0000802
404 Ga0496123_0032529
405 Ga0496124_0003591
406 Ga0496124_0097278
407 Ga0496125_0072307
408 Ga0496126_0014990
409 Ga0496126_0040203
410 Ga0501033_0092963
411 Ga0501034_0113698
412 Ga0501036_0026749
413 Ga0501038_0020508
414 Ga0501039_0017851
415 Ga0501039_0094471
416 Ga0501040_0003598
417 Ga0501042_0001382
418 Ga0501043_0032217
419 Ga0501047_0002509
420 Ga0501048_0013262
421 Ga0501067_0025074
422 Ga0501067_0032222
423 Ga0501069_0011256
424 Ga0501070_0004173
425 Ga0501073_0000015
426 Ga0501073_0001325
427 Ga0501073_0132782
428 Ga0501075_0050192
429 Ga0501079_0027386
430 Ga0501079_0052679
431 Ga0501080_0003872
432 Ga0501081_0008343
433 Ga0501083_0000109
434 Ga0501083_0053687
435 Ga0501035_0003330
436 Ga0501035_0025420
437 Ga0501044_0004127
438 Ga0501044_0174368
439 nmdc:mga00v17_3282_c1
440 nmdc:mga0yw44_5297_c1
441 nmdc:mga0rr50_124848_c1
442 nmdc:mga0a205_69108_c1
443 nmdc:mga0sz30_14769_c1
444 nmdc:mga0sz30_27842_c1
445 Ga0495595_0005489
446 Ga0495619_0012001
447 Ga0500647_0000425
448 Ga0500556_0000140
449 Ga0500556_0000163
450 Ga0500562_000303
451 Ga0500562_004999
452 Ga0500572_000073
453 Ga0500655_000683
454 Ga0500655_003440
455 Ga0500559_0000156
456 Ga0500559_0000513
457 Ga0587071_011130
458 Ga0501082_0096084
459 2643753165
460 2643887832
461 2643887882
462 2808877113
463 2808900667
464 2808900686
465 2809226057
466 2812322310
467 2852632347
468 2897563801
469 2906801061
470 2919052706
471 2939601791
472 2939601798
473 2945945337
474 2945945347
475 2945969490
476 8054108908
477 8054108915
478 8055034673

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01571

GCV_T

Aminomethyltransferase folate-binding domain

20

265

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x1k-assembly1.cif.gz_A vanillate/3-o-methylgallate o-demethylase, ligm, 3-o-methylgallate complex form 0.9825 23 472
5tl4-assembly2.cif.gz_B crystal structure of sphingomonas paucimobilis aryl o-demethylase ligm 0.9807 23 471
5x1k-assembly2.cif.gz_B vanillate/3-o-methylgallate o-demethylase, ligm, 3-o-methylgallate complex form 0.9806 24 471
5x1i-assembly2.cif.gz_B vanillate/3-o-methylgallate o-demethylase, ligm, substrate free form 0.9793 23 471
5x1i-assembly1.cif.gz_A-2 vanillate/3-o-methylgallate o-demethylase, ligm, substrate free form 0.9781 24 472
ID Description Score Start End Superfamily
3gsiA03 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9017 179 275 3.30.1360.120
4pabB03 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.891 179 275 3.30.1360.120
4paaA04 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.8827 82 163 3.30.70.1400
1wosA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.8734 79 162 3.30.70.1400
1v5vB01 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.869 179 272 3.30.1360.120
ID Description Score Start End GO Terms
AF-A0A368EQP9-F1-model_v4 Aminomethyl transferase family protein 0.9891 23 465 GO:0016740
AF-A0A7X8WQ21-F1-model_v4 Aminomethyl transferase family protein 0.9859 41 362 GO:0016740
AF-A0A0S6X2P0-F1-model_v4 Glycine cleavage system protein T 0.9843 23 377
AF-A0A4Q3XRL6-F1-model_v4 Aminomethyl transferase family protein 0.9843 23 333 GO:0016740
AF-A0A368EQP9-F1-model_v4 Aminomethyl transferase family protein 0.9825 23 465 GO:0016740

Map