F353298

General Info

Members Datasets Scaffolds Average Seq Length
240 199 480 229

Family's Representative Sequence

Representative Sequence 3300053080|Ga0500635_0002826|Ga0500635_0002826_2193_2945
Length 250
Sequence MSRATRLLDLLQLLRRHRYPVAGAELARELEISLRTLYRDIGALQAQGAHIEGEPGVGYVLRPGYMLPPLMLSQEELEALVLGVRWVADRGDARLGEAAQNALTKITAVLPKDLADEIETSGLLVVPSWSSPQSRIDLGDIRASIRGECRVEVRYTDLKEVTTDRVVWPVALGFFEHIRIVVVWCEMRQAFRHLRADRIVSWSPLENRYPKRRAVLLKAWKKERDEEHAKYEAGLPAKKQPVLEVGTTVQ

Samples

Sample ID Description Type Environment
1 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
9 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
10 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
24 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
30 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
36 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
43 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
44 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
45 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
47 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
52 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
64 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
65 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
66 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
69 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
70 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
71 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
72 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
78 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
79 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
80 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
81 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
82 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
83 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
87 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
88 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
89 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
90 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
91 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
92 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
93 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
94 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
95 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
96 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
97 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
98 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
99 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
100 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
101 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
102 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
103 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
104 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
105 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
106 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
107 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
108 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
111 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
114 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
115 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
116 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
117 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
129 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
130 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
131 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
136 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
137 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
140 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
141 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
142 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
143 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
144 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
145 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
146 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
147 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
148 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
149 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
150 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
151 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
152 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
153 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
154 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
155 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
156 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
157 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
158 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
159 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
160 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
161 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
162 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
163 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
164 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
165 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
166 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
167 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
168 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
169 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
170 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
171 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
172 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
173 2643221547 Pseudolabrys sp. Root1462 Isolate Unclassified
174 2643221571 Pseudomonas sp. Root569 Isolate Unclassified
175 2643221591 Devosia sp. Root685 Isolate Unclassified
176 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
177 2643221643 Rhizobium sp. Root1220 Isolate Unclassified
178 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
179 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
180 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
181 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
182 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
183 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
184 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
185 2919493220 Aeromonas salmonicida salmonicida 3466 Isolate Unclassified
186 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
187 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
188 2929189879 Pseudomonas sp. R-71842 Hybrid assembly Isolate Unclassified
189 2932401849 Devosia sp. 2618 Isolate Rhizosphere
190 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
191 2964670856 Sinorhizobium meliloti USDA1211 Isolate Nodule
192 2969304461 Pseudomonas sp. R84 Isolate Rhizosphere
193 2996887358 Rhizobium sp. R711 Isolate Nodule
194 8005258706 Rhizobium sp. R693 Isolate Nodule
195 8005321885 Rhizobium sp. R72 Isolate Nodule
196 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
197 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
198 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
199 8056375014 Rhizobium redzepovicii 18T Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.33
Metatranscriptomes 0
Isolates 16.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.25
Nodule 9.58
Rhizoplane 3.33
Rhizosphere 53.33
Stem 0
Stem Tuber 0
Unclassified 1.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500635_0002826 3300053080 Bacteria 4314
2 JGI24740J21852_10075390 3300001979 Bacteria 894
3 JGI24738J21930_10000079 3300002075 Bacteria 21137
4 JGI25152J39213_1008704 3300002773 Bacteria 2491
5 rootH1_10019159 3300003316 Bacteria 1511
6 rootH1_10028145 3300003316 Bacteria 16351
7 rootL2_10067942 3300003322 Bacteria 4650
8 rootL2_10094454 3300003322 Bacteria 2253
9 rootL2_10100230 3300003322 Bacteria 1066
10 rootH1_10130367 3300003323 Bacteria 2224
11 Ga0055524_1002068 3300003775 Bacteria 10650
12 Ga0055528_1029562 3300003790 Bacteria 1479
13 Ga0055540_1000379 3300003792 Bacteria 37172
14 Ga0055540_1027865 3300003792 Bacteria 1344
15 Ga0055531_10028291 3300003794 Bacteria 1938
16 Ga0070666_10192941 3300005335 Bacteria 1432
17 Ga0070669_100287901 3300005353 Bacteria 1318
18 Ga0070671_100009439 3300005355 Bacteria 7832
19 Ga0070663_100086021 3300005455 Bacteria 2321
20 Ga0070679_100019245 3300005530 Bacteria 6635
21 Ga0068853_100132379 3300005539 Bacteria 2234
22 Ga0070695_100008805 3300005545 Bacteria 5999
23 Ga0070704_100106562 3300005549 Bacteria 2124
24 Ga0068855_100007082 3300005563 Bacteria 13603
25 Ga0068860_100502102 3300005843 Bacteria 1211
26 Ga0075365_10048102 3300006038 Bacteria 2806
27 Ga0075365_10056029 3300006038 Bacteria 2619
28 Ga0075367_10001390 3300006178 Bacteria 10351
29 Ga0075367_10079918 3300006178 Unclassified 1977
30 Ga0075369_10001861 3300006186 Bacteria 7368
31 Ga0075366_10268483 3300006195 Bacteria 1042
32 Ga0075370_10053580 3300006353 Bacteria 2290
33 Ga0075431_100569981 3300006847 Bacteria 1118
34 Ga0075434_100601000 3300006871 Bacteria 1119
35 Ga0105251_10007685 3300009011 Bacteria 6592
36 Ga0105250_10092458 3300009092 Bacteria 1231
37 Ga0105240_10012652 3300009093 Bacteria 11635
38 Ga0105240_10015473 3300009093 Bacteria 10372
39 Ga0105248_10069265 3300009177 Bacteria 3961
40 Ga0105237_10025404 3300009545 Bacteria 6058
41 Ga0105237_10428820 3300009545 Bacteria 1328
42 Ga0105249_10011020 3300009553 Bacteria 7943
43 Ga0123341_1033611 3300009765 Bacteria 3696
44 Ga0123342_1020517 3300009766 Bacteria 4813
45 Ga0105239_10159242 3300010375 Bacteria 2522
46 Ga0105239_10467731 3300010375 Bacteria 1431
47 Ga0157371_10126815 3300013102 Bacteria 1815
48 Ga0157369_10014255 3300013105 Bacteria 8979
49 Ga0157372_10515638 3300013307 Bacteria 1394
50 Ga0182008_10016679 3300014497 Bacteria 3813
51 Ga0182008_10210951 3300014497 Bacteria 991
52 Ga0183365_10001 3300015684 Bacteria 2090444
53 Ga0163161_10708308 3300017792 Bacteria 839
54 Ga0209129_1002196 3300025258 Bacteria 9810
55 Ga0209673_1021514 3300025273 Bacteria 2253
56 Ga0209673_1045455 3300025273 Bacteria 1206
57 Ga0209025_1035790 3300025294 Bacteria 2236
58 Ga0209025_1039564 3300025294 Bacteria 2054
59 Ga0209564_1021632 3300025295 Bacteria 2303
60 Ga0209758_1016949 3300025297 Bacteria 3664
61 Ga0209050_1004034 3300025298 Bacteria 10314
62 Ga0209256_1007562 3300025299 Bacteria 5309
63 Ga0207426_1000608 3300025302 Bacteria 46209
64 Ga0209051_1000249 3300025303 Bacteria 90988
65 Ga0209051_1008254 3300025303 Bacteria 5543
66 Ga0209257_1005305 3300025304 Bacteria 9153
67 Ga0207696_1047289 3300025711 Bacteria 1240
68 Ga0207680_10084138 3300025903 Bacteria 2007
69 Ga0207695_10028775 3300025913 Bacteria 6152
70 Ga0207695_10040421 3300025913 Bacteria 5001
71 Ga0207644_10046369 3300025931 Bacteria 3096
72 Ga0207667_10011642 3300025949 Bacteria 10211
73 Ga0207658_10073259 3300025986 Bacteria 2599
74 Ga0207639_10139318 3300026041 Bacteria 2019
75 Ga0207678_10114935 3300026067 Bacteria 2296
76 Ga0209971_1005141 3300027682 Bacteria 3106
77 Ga0265334_10021465 3300028573 Bacteria 2636
78 Ga0307511_10000723 3300030521 Bacteria 35176
79 Ga0265330_10000012 3300031235 Bacteria 180837
80 Ga0265340_10126675 3300031247 Bacteria 1173
81 Ga0307513_10407395 3300031456 Bacteria 1093
82 Ga0307413_10304083 3300031824 Bacteria 1211
83 Ga0307406_10258570 3300031901 Bacteria 1316
84 Ga0307414_10029888 3300032004 Bacteria 3552
85 Ga0307414_10074231 3300032004 Bacteria 2463
86 Ga0307414_10084009 3300032004 Bacteria 2340
87 Ga0307507_10070254 3300033179 Bacteria 3178
88 Ga0315911_1000007 3300033442 Bacteria 413725
89 Ga0395900_0179296 3300037418 Bacteria 2154
90 Ga0395898_0011775 3300037466 Bacteria 9066
91 Ga0395898_0020169 3300037466 Bacteria 6773
92 Ga0395905_0000453 3300037471 Bacteria 57443
93 Ga0395905_0000521 3300037471 Bacteria 52722
94 Ga0395905_0006639 3300037471 Bacteria 11601
95 Ga0395905_0031987 3300037471 Bacteria 4949
96 Ga0395901_0544587 3300038443 Bacteria 1177
97 Ga0439465_0007526 3300041413 Bacteria 3461
98 Ga0439432_026606 3300042006 Bacteria 1893
99 Ga0466969_0028807 3300044656 Bacteria 2838
100 Ga0466969_0235486 3300044656 Bacteria 831
101 Ga0466966_0000994 3300044684 Bacteria 18155
102 Ga0466961_0056082 3300044693 Bacteria 2510
103 Ga0466961_0185637 3300044693 Bacteria 1290
104 Ga0466971_0000560 3300044719 Bacteria 14740
105 Ga0466970_0009417 3300044765 Bacteria 4937
106 Ga0466957_0067928 3300044842 Bacteria 2200
107 Ga0466959_0001587 3300045049 Bacteria 14001
108 Ga0466959_0008793 3300045049 Bacteria 7154
109 Ga0466959_0371798 3300045049 Bacteria 973
110 Ga0466958_0000408 3300045836 Bacteria 17657
111 Ga0466958_0009814 3300045836 Bacteria 5342
112 Ga0495617_029916 3300046452 Bacteria 1831
113 Ga0495603_0103819 3300046455 Bacteria 1659
114 Ga0495590_0121506 3300046457 Bacteria 936
115 Ga0495638_0000546 3300046460 Bacteria 42990
116 Ga0495638_0005705 3300046460 Bacteria 9168
117 Ga0495605_0013763 3300046474 Bacteria 4446
118 Ga0495584_0176769 3300046491 Bacteria 1085
119 Ga0495585_0048990 3300046492 Bacteria 2348
120 Ga0495585_0060503 3300046492 Bacteria 2084
121 Ga0495607_0051422 3300046501 Bacteria 2393
122 Ga0495583_0019717 3300046506 Bacteria 3512
123 Ga0495583_0042805 3300046506 Bacteria 2112
124 Ga0495616_0012322 3300046513 Bacteria 4857
125 Ga0495620_0019400 3300046515 Bacteria 3345
126 Ga0495631_0001028 3300046518 Bacteria 17326
127 Ga0495631_0051158 3300046518 Bacteria 1806
128 Ga0495631_0052731 3300046518 Bacteria 1776
129 Ga0495632_0004447 3300046519 Bacteria 9521
130 Ga0495643_0000507 3300046522 Bacteria 48620
131 Ga0495644_0023559 3300046523 Bacteria 2343
132 Ga0495654_0101014 3300046530 Bacteria 1328
133 Ga0495609_0006089 3300046538 Bacteria 6206
134 Ga0495609_0013216 3300046538 Bacteria 3904
135 Ga0495622_0150056 3300046557 Bacteria 1055
136 Ga0495633_0014526 3300046558 Bacteria 4113
137 Ga0495656_0013929 3300046615 Bacteria 3004
138 Ga0495668_0035608 3300046616 Bacteria 2790
139 Ga0495668_0088388 3300046616 Bacteria 1699
140 Ga0495611_0004843 3300046648 Bacteria 5784
141 Ga0495625_0085409 3300046660 Bacteria 2190
142 Ga0495625_0109019 3300046660 Bacteria 1894
143 Ga0495661_0088163 3300046665 Bacteria 1772
144 Ga0495588_0148242 3300046674 Bacteria 1240
145 Ga0495670_0010293 3300046691 Bacteria 4595
146 Ga0495671_0002769 3300046692 Bacteria 10976
147 Ga0495589_0030200 3300046794 Bacteria 2730
148 Ga0495660_0091568 3300046810 Bacteria 1579
149 Ga0495660_0235338 3300046810 Unclassified 856
150 Ga0495604_0428843 3300047317 Bacteria 867
151 Ga0495636_0128579 3300047318 Bacteria 1125
152 Ga0495672_0026598 3300047320 Bacteria 3690
153 Ga0495673_0043996 3300047469 Bacteria 1994
154 Ga0496101_0114056 3300048904 Bacteria 2037
155 Ga0496105_0145978 3300048908 Bacteria 1945
156 Ga0496108_0779842 3300048911 Bacteria 825
157 Ga0496110_0217735 3300048913 Bacteria 1736
158 Ga0496111_0043126 3300048914 Bacteria 3242
159 Ga0496111_0244784 3300048914 Bacteria 1331
160 Ga0496113_0164612 3300048916 Bacteria 1754
161 Ga0496114_0313666 3300048917 Bacteria 1385
162 Ga0496116_0086993 3300048919 Bacteria 1914
163 Ga0496119_0036165 3300048922 Bacteria 3226
164 Ga0496121_0128104 3300048924 Bacteria 1905
165 Ga0496124_0065394 3300048927 Bacteria 3032
166 Ga0496124_0182625 3300048927 Bacteria 1613
167 Ga0496125_0001328 3300048928 Bacteria 36531
168 Ga0496125_0070333 3300048928 Bacteria 2740
169 Ga0496126_0108130 3300048929 Bacteria 2425
170 Ga0496126_0213418 3300048929 Bacteria 1624
171 Ga0495678_038658 3300049459 Bacteria 1929
172 Ga0501046_0351255 3300049580 Bacteria 1070
173 Ga0501035_0035286 3300049822 Bacteria 4539
174 nmdc:mga0k408_362641_c1 3300050493 Bacteria 863
175 nmdc:mga06z11_102813_c1 3300050494 Unclassified 1570
176 nmdc:mga06r32_558388_c1 3300050510 Bacteria 1118
177 Ga0500610_0083204 3300053079 Bacteria 1667
178 Ga0500610_0214948 3300053079 Bacteria 915
179 Ga0500578_0134281 3300053086 Bacteria 1550
180 Ga0500646_0013173 3300053090 Bacteria 2140
181 Ga0500583_0005273 3300053092 Bacteria 4315
182 Ga0500651_0250943 3300053093 Bacteria 1029
183 Ga0500641_0018228 3300053096 Bacteria 2637
184 Ga0500650_0161570 3300053098 Bacteria 1033
185 Ga0500569_005324 3300053109 Bacteria 2761
186 Ga0500594_0001173 3300053118 Bacteria 5657
187 Ga0500608_000148 3300053122 Bacteria 29285
188 Ga0500642_0117001 3300053130 Bacteria 1246
189 Ga0500655_007199 3300053133 Bacteria 2000
190 Ga0500559_0015650 3300053136 Bacteria 3202
191 Ga0500568_0004423 3300053139 Bacteria 7510
192 Ga0500577_0005625 3300053142 Bacteria 3395
193 Ga0500604_0000325 3300053151 Bacteria 13283
194 Ga0500604_0000459 3300053151 Bacteria 11255
195 Ga0500616_0006700 3300053153 Bacteria 7476
196 Ga0500627_0134271 3300053158 Bacteria 1118
197 Ga0500634_0000302 3300053161 Bacteria 15663
198 Ga0500636_0219085 3300053177 Bacteria 993
199 Ga0466962_0000574 3300061719 Bacteria 16166
200 Ga0466962_0107840 3300061719 Bacteria 1340
201 2501078124 2501025502 Bacteria 9641094
202 2511091920 2510917013 Bacteria 9951648
203 2511185525 2510917028 Bacteria 6185411
204 2513600544 2513237088 Bacteria 6927906
205 2513862619 2513237137 Bacteria 9558895
206 2513868526 2513237138 Bacteria 7368160
207 2513924222 2513237146 Bacteria 7166346
208 2535514464 2534681796 Bacteria 7146037
209 2585201403 2582581294 Bacteria 6626667
210 2585232329 2582581299 Bacteria 6518058
211 2585399208 2582581867 Bacteria 7184437
212 2585818645 2585427590 Bacteria 6824633
213 2599419825 2599185170 Bacteria 7295545
214 2643757886 2643221547 Bacteria 4740017
215 2643869939 2643221571 Bacteria 6228673
216 2643963542 2643221591 Bacteria 4397626
217 2644191112 2643221634 Bacteria 6705461
218 2644237838 2643221643 Bacteria 5749658
219 2838039645 2838035591 Bacteria 7166484
220 2838663916 2838661181 Bacteria 7385261
221 2841869131 2841864319 Bacteria 6742987
222 2842210499 2842205361 Bacteria 6340321
223 2842283953 2842278818 Bacteria 6340002
224 2842368233 2842363717 Bacteria 6844742
225 2842396723 2842395702 Bacteria 6780583
226 2919496213 2919493220 Bacteria 4598500
227 2919546568 2919543075 Bacteria 4728703
228 2923556069 2923556063 Bacteria 6793593
229 2929192502 2929189879 Bacteria 5930554
230 2932403238 2932401849 Bacteria 4262978
231 2933022052 2933016740 Bacteria 6355406
232 2964673542 2964670856 Bacteria 6851364
233 2969307050 2969304461 Bacteria 6601805
234 2996889742 2996887358 Bacteria 5795980
235 8005261588 8005258706 Bacteria 6184835
236 8005324269 8005321885 Bacteria 5795980
237 8005543100 8005542996 Bacteria 7077758
238 8006941640 8006933436 Bacteria 10410654
239 8006981349 8006973647 Bacteria 10679141
240 8056375325 8056375014 Bacteria 7006639
241 Ga0500635_0002826
242 JGI24740J21852_10075390
243 JGI24738J21930_10000079
244 JGI25152J39213_1008704
245 rootH1_10019159
246 rootH1_10028145
247 rootL2_10067942
248 rootL2_10094454
249 rootL2_10100230
250 rootH1_10130367
251 Ga0055524_1002068
252 Ga0055528_1029562
253 Ga0055540_1000379
254 Ga0055540_1027865
255 Ga0055531_10028291
256 Ga0070666_10192941
257 Ga0070669_100287901
258 Ga0070671_100009439
259 Ga0070663_100086021
260 Ga0070679_100019245
261 Ga0068853_100132379
262 Ga0070695_100008805
263 Ga0070704_100106562
264 Ga0068855_100007082
265 Ga0068860_100502102
266 Ga0075365_10048102
267 Ga0075365_10056029
268 Ga0075367_10001390
269 Ga0075367_10079918
270 Ga0075369_10001861
271 Ga0075366_10268483
272 Ga0075370_10053580
273 Ga0075431_100569981
274 Ga0075434_100601000
275 Ga0105251_10007685
276 Ga0105250_10092458
277 Ga0105240_10012652
278 Ga0105240_10015473
279 Ga0105248_10069265
280 Ga0105237_10025404
281 Ga0105237_10428820
282 Ga0105249_10011020
283 Ga0123341_1033611
284 Ga0123342_1020517
285 Ga0105239_10159242
286 Ga0105239_10467731
287 Ga0157371_10126815
288 Ga0157369_10014255
289 Ga0157372_10515638
290 Ga0182008_10016679
291 Ga0182008_10210951
292 Ga0183365_10001
293 Ga0163161_10708308
294 Ga0209129_1002196
295 Ga0209673_1021514
296 Ga0209673_1045455
297 Ga0209025_1035790
298 Ga0209025_1039564
299 Ga0209564_1021632
300 Ga0209758_1016949
301 Ga0209050_1004034
302 Ga0209256_1007562
303 Ga0207426_1000608
304 Ga0209051_1000249
305 Ga0209051_1008254
306 Ga0209257_1005305
307 Ga0207696_1047289
308 Ga0207680_10084138
309 Ga0207695_10028775
310 Ga0207695_10040421
311 Ga0207644_10046369
312 Ga0207667_10011642
313 Ga0207658_10073259
314 Ga0207639_10139318
315 Ga0207678_10114935
316 Ga0209971_1005141
317 Ga0265334_10021465
318 Ga0307511_10000723
319 Ga0265330_10000012
320 Ga0265340_10126675
321 Ga0307513_10407395
322 Ga0307413_10304083
323 Ga0307406_10258570
324 Ga0307414_10029888
325 Ga0307414_10074231
326 Ga0307414_10084009
327 Ga0307507_10070254
328 Ga0315911_1000007
329 Ga0395900_0179296
330 Ga0395898_0011775
331 Ga0395898_0020169
332 Ga0395905_0000453
333 Ga0395905_0000521
334 Ga0395905_0006639
335 Ga0395905_0031987
336 Ga0395901_0544587
337 Ga0439465_0007526
338 Ga0439432_026606
339 Ga0466969_0028807
340 Ga0466969_0235486
341 Ga0466966_0000994
342 Ga0466961_0056082
343 Ga0466961_0185637
344 Ga0466971_0000560
345 Ga0466970_0009417
346 Ga0466957_0067928
347 Ga0466959_0001587
348 Ga0466959_0008793
349 Ga0466959_0371798
350 Ga0466958_0000408
351 Ga0466958_0009814
352 Ga0495617_029916
353 Ga0495603_0103819
354 Ga0495590_0121506
355 Ga0495638_0000546
356 Ga0495638_0005705
357 Ga0495605_0013763
358 Ga0495584_0176769
359 Ga0495585_0048990
360 Ga0495585_0060503
361 Ga0495607_0051422
362 Ga0495583_0019717
363 Ga0495583_0042805
364 Ga0495616_0012322
365 Ga0495620_0019400
366 Ga0495631_0001028
367 Ga0495631_0051158
368 Ga0495631_0052731
369 Ga0495632_0004447
370 Ga0495643_0000507
371 Ga0495644_0023559
372 Ga0495654_0101014
373 Ga0495609_0006089
374 Ga0495609_0013216
375 Ga0495622_0150056
376 Ga0495633_0014526
377 Ga0495656_0013929
378 Ga0495668_0035608
379 Ga0495668_0088388
380 Ga0495611_0004843
381 Ga0495625_0085409
382 Ga0495625_0109019
383 Ga0495661_0088163
384 Ga0495588_0148242
385 Ga0495670_0010293
386 Ga0495671_0002769
387 Ga0495589_0030200
388 Ga0495660_0091568
389 Ga0495660_0235338
390 Ga0495604_0428843
391 Ga0495636_0128579
392 Ga0495672_0026598
393 Ga0495673_0043996
394 Ga0496101_0114056
395 Ga0496105_0145978
396 Ga0496108_0779842
397 Ga0496110_0217735
398 Ga0496111_0043126
399 Ga0496111_0244784
400 Ga0496113_0164612
401 Ga0496114_0313666
402 Ga0496116_0086993
403 Ga0496119_0036165
404 Ga0496121_0128104
405 Ga0496124_0065394
406 Ga0496124_0182625
407 Ga0496125_0001328
408 Ga0496125_0070333
409 Ga0496126_0108130
410 Ga0496126_0213418
411 Ga0495678_038658
412 Ga0501046_0351255
413 Ga0501035_0035286
414 nmdc:mga0k408_362641_c1
415 nmdc:mga06z11_102813_c1
416 nmdc:mga06r32_558388_c1
417 Ga0500610_0083204
418 Ga0500610_0214948
419 Ga0500578_0134281
420 Ga0500646_0013173
421 Ga0500583_0005273
422 Ga0500651_0250943
423 Ga0500641_0018228
424 Ga0500650_0161570
425 Ga0500569_005324
426 Ga0500594_0001173
427 Ga0500608_000148
428 Ga0500642_0117001
429 Ga0500655_007199
430 Ga0500559_0015650
431 Ga0500568_0004423
432 Ga0500577_0005625
433 Ga0500604_0000325
434 Ga0500604_0000459
435 Ga0500616_0006700
436 Ga0500627_0134271
437 Ga0500634_0000302
438 Ga0500636_0219085
439 Ga0466962_0000574
440 Ga0466962_0107840
441 2501078124
442 2511091920
443 2511185525
444 2513600544
445 2513862619
446 2513868526
447 2513924222
448 2535514464
449 2585201403
450 2585232329
451 2585399208
452 2585818645
453 2599419825
454 2643757886
455 2643869939
456 2643963542
457 2644191112
458 2644237838
459 2838039645
460 2838663916
461 2841869131
462 2842210499
463 2842283953
464 2842368233
465 2842396723
466 2919496213
467 2919546568
468 2923556069
469 2929192502
470 2932403238
471 2933022052
472 2964673542
473 2969307050
474 2996889742
475 8005261588
476 8005324269
477 8005543100
478 8006941640
479 8006981349
480 8056375325

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08279

HTH_11

HTH domain

6

60

0.99

PF13280

WYL

WYL domain

137

240

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hob-assembly1.cif.gz_A the crystal structure of the zalpha domain from cyprinid herpes virus 3 0.9078 4 48
1j75-assembly1.cif.gz_A-2 crystal structure of the dna-binding domain zalpha of dlm-1 bound to z-dna 0.8592 6 62
4aih-assembly2.cif.gz_D crystal structure of rova from yersinia in its free form 0.8356 6 62
1j75-assembly1.cif.gz_A-2 crystal structure of the dna-binding domain zalpha of dlm-1 bound to z-dna 0.8329 6 62
4wcg-assembly1.cif.gz_B the binding mode of cyprinid herpesvirus3 orf112-zalpha to z-dna 0.8209 4 62
ID Description Score Start End Superfamily
3v7sA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9221 5 63 1.10.10.10
af_Q2G258_1_64_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9113 7 63 1.10.10.10
4hobA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9078 4 48 1.10.10.10
1j5yA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8975 3 64 1.10.10.10
2vc0B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.884 5 48 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A1G1N1W9-F1-model_v4 Exonuclease domain-containing protein 0.9826 137 204 GO:0003677
GO:0003887
GO:0005829
GO:0008408
GO:0045004
AF-A0A3D2X3X3-F1-model_v4 YafY family transcriptional regulator 0.9816 137 200
AF-A0A4Q3UAB6-F1-model_v4 WYL domain-containing protein 0.9677 141 227
AF-A0A7X3MD42-F1-model_v4 WYL domain-containing protein 0.9655 135 210
AF-Q1WLE7-F1-model_v4 WYL domain-containing protein 0.9638 136 224

Map