F353064

General Info

Members Datasets Scaffolds Average Seq Length
240 145 480 326

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_1484319|Ga0436364_1484319_2738_3943
Length 401
Sequence LATSVPDWPAFADSSDIAQSLFHDHVPTKRMRLRTVWINRRHDRPVWRASPAPPGDVAPDWEFPSMAAFASAVEANRRVEISATDYHTAGEPFRIVGDGTPDIPGGTVRERREYASGSEEVERVRRLLCHEPRGHADMYGCFLVAPDDEEADFGVLFWHKDGYSTACGHGTIALGAWAVESGRVWAPDDGSVAVTIDVPSGRVVATVHCRAGAVERVVFRNVPSFVIARGVLAGEVEVDVAYGGAIYAFAPAASVGLRVVPQDLAELIPAGRAIKHALEGSPVARHPEDDRLGGVYGTVFYEELGPLHYRNVAIFADGEVDRSPTGSATSARTALLDADGAIALGETWRNDSIVETTFHARAIGRSPAGVLTEVEGTAFRTGEHRFVLDPRDPLGTGFVLR

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
41 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
61 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
63 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
64 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
65 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
66 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
72 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
73 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
74 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
75 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
76 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
77 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
78 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
79 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
80 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
81 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
82 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
83 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
84 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
85 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
88 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
89 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
90 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
91 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
92 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
93 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
94 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
95 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
96 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
97 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
98 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
99 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
100 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
101 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
102 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
103 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
118 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
119 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
120 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
121 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
122 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
123 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
124 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
125 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
126 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
140 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
145 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0
Isolates 0.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.92
Rhizosphere 89.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_1484319 3300037853 Bacteria 3954
2 JGI25407J50210_10000618 3300003373 Bacteria 7287
3 Ga0068869_100157331 3300005334 Bacteria 1767
4 Ga0070666_10176019 3300005335 Bacteria 1500
5 Ga0070680_100318582 3300005336 Bacteria 1320
6 Ga0068868_100187305 3300005338 Bacteria 1720
7 Ga0068868_100329444 3300005338 Bacteria 1303
8 Ga0070692_10056244 3300005345 Bacteria 2060
9 Ga0070714_100029860 3300005435 Bacteria 4535
10 Ga0070714_100084167 3300005435 Bacteria 2775
11 Ga0070713_100020000 3300005436 Bacteria 5125
12 Ga0068867_100270616 3300005459 Bacteria 1389
13 Ga0070707_100003384 3300005468 Bacteria 15067
14 Ga0070698_100030299 3300005471 Bacteria 5610
15 Ga0070699_100000352 3300005518 Bacteria 44680
16 Ga0068857_100009624 3300005577 Bacteria 8395
17 Ga0068854_100110949 3300005578 Bacteria 2069
18 Ga0068856_100229123 3300005614 Bacteria 1873
19 Ga0068856_100320173 3300005614 Bacteria 1568
20 Ga0068852_100134714 3300005616 Bacteria 2280
21 Ga0068859_100206912 3300005617 Bacteria 2048
22 Ga0068864_100099707 3300005618 Bacteria 2574
23 Ga0068870_10156394 3300005840 Bacteria 1348
24 Ga0081455_10000397 3300005937 Bacteria 57358
25 Ga0081455_10003263 3300005937 Bacteria 18769
26 Ga0081455_10004056 3300005937 Bacteria 16598
27 Ga0081455_10004265 3300005937 Bacteria 16109
28 Ga0081455_10008369 3300005937 Bacteria 10765
29 Ga0081455_10017700 3300005937 Bacteria 6818
30 Ga0081455_10035430 3300005937 Bacteria 4459
31 Ga0081455_10167892 3300005937 Bacteria 1675
32 Ga0081538_10000077 3300005981 Bacteria 93624
33 Ga0081538_10000099 3300005981 Bacteria 83947
34 Ga0081538_10001329 3300005981 Bacteria 25435
35 Ga0081538_10002526 3300005981 Bacteria 17829
36 Ga0081538_10005876 3300005981 Bacteria 10933
37 Ga0081538_10010007 3300005981 Bacteria 7820
38 Ga0081538_10010652 3300005981 Bacteria 7524
39 Ga0081538_10033422 3300005981 Bacteria 3423
40 Ga0081540_1000509 3300005983 Bacteria 38185
41 Ga0070717_10004174 3300006028 Bacteria 10416
42 Ga0070717_10156197 3300006028 Bacteria 1977
43 Ga0075428_100003983 3300006844 Bacteria 16204
44 Ga0075428_100015022 3300006844 Bacteria 8602
45 Ga0075430_100022147 3300006846 Bacteria 5401
46 Ga0075430_100025171 3300006846 Bacteria 5061
47 Ga0075430_100052604 3300006846 Bacteria 3431
48 Ga0075431_100039158 3300006847 Bacteria 4883
49 Ga0075431_100043468 3300006847 Bacteria 4636
50 Ga0075431_100075501 3300006847 Bacteria 3478
51 Ga0075433_10026286 3300006852 Bacteria 4926
52 Ga0075433_10039160 3300006852 Bacteria 4097
53 Ga0075434_100197395 3300006871 Bacteria 2032
54 Ga0075429_100022777 3300006880 Bacteria 5431
55 Ga0075429_100046642 3300006880 Bacteria 3770
56 Ga0075436_100026428 3300006914 Bacteria 3996
57 Ga0097620_100206916 3300006931 Bacteria 2048
58 Ga0075435_100056974 3300007076 Bacteria 3160
59 Ga0111539_10007872 3300009094 Bacteria 13603
60 Ga0111539_10009677 3300009094 Bacteria 12165
61 Ga0111539_10021717 3300009094 Bacteria 7892
62 Ga0111539_10195797 3300009094 Bacteria 2357
63 Ga0114129_10010631 3300009147 Bacteria 13127
64 Ga0114129_10019432 3300009147 Bacteria 9672
65 Ga0114129_10026635 3300009147 Bacteria 8188
66 Ga0114129_10084511 3300009147 Bacteria 4406
67 Ga0105248_10027280 3300009177 Bacteria 6356
68 Ga0105248_10387342 3300009177 Bacteria 1574
69 Ga0105238_10190237 3300009551 Bacteria 2029
70 Ga0105246_10305780 3300011119 Bacteria 1286
71 Ga0157379_10095435 3300014968 Bacteria 2668
72 Ga0213875_10013105 3300021388 Bacteria 4078
73 Ga0207643_10078834 3300025908 Bacteria 1906
74 Ga0207693_10255495 3300025915 Bacteria 1375
75 Ga0207646_10000216 3300025922 Bacteria 78478
76 Ga0207687_10202639 3300025927 Bacteria 1552
77 Ga0207700_10018109 3300025928 Bacteria 4724
78 Ga0207700_10136324 3300025928 Bacteria 2011
79 Ga0207706_10109583 3300025933 Bacteria 2430
80 Ga0207686_10175623 3300025934 Bacteria 1515
81 Ga0207711_10027974 3300025941 Bacteria 4740
82 Ga0207689_10125767 3300025942 Bacteria 2109
83 Ga0207661_10074202 3300025944 Bacteria 2788
84 Ga0207661_10462630 3300025944 Bacteria 1156
85 Ga0207679_10090779 3300025945 Bacteria 2362
86 Ga0207640_10121271 3300025981 Bacteria 1873
87 Ga0207640_10123119 3300025981 Bacteria 1862
88 Ga0207677_10383754 3300026023 Bacteria 1186
89 Ga0207678_10166849 3300026067 Bacteria 1880
90 Ga0207648_10050002 3300026089 Bacteria 3656
91 Ga0207648_10321327 3300026089 Bacteria 1391
92 Ga0207648_10492960 3300026089 Bacteria 1120
93 Ga0207676_10084350 3300026095 Bacteria 2590
94 Ga0207674_10003210 3300026116 Bacteria 20144
95 Ga0207675_100220269 3300026118 Bacteria 1828
96 Ga0207698_10142925 3300026142 Bacteria 2065
97 Ga0207428_10009317 3300027907 Bacteria 8808
98 Ga0207428_10013183 3300027907 Bacteria 7236
99 Ga0207428_10016118 3300027907 Bacteria 6437
100 Ga0268265_10346414 3300028380 Bacteria 1355
101 Ga0307405_10015154 3300031731 Bacteria 4166
102 Ga0307413_10013938 3300031824 Bacteria 4064
103 Ga0307413_10318537 3300031824 Bacteria 1187
104 Ga0307410_10007543 3300031852 Bacteria 5962
105 Ga0307410_10009411 3300031852 Bacteria 5480
106 Ga0307410_10183585 3300031852 Bacteria 1585
107 Ga0307410_10196934 3300031852 Bacteria 1536
108 Ga0307406_10026371 3300031901 Bacteria 3489
109 Ga0307406_10062554 3300031901 Bacteria 2408
110 Ga0307406_10195524 3300031901 Bacteria 1484
111 Ga0307407_10246238 3300031903 Bacteria 1222
112 Ga0307409_100045949 3300031995 Bacteria 3301
113 Ga0307409_100065909 3300031995 Bacteria 2852
114 Ga0307409_100140155 3300031995 Bacteria 2082
115 Ga0307416_100007345 3300032002 Bacteria 6998
116 Ga0307416_100106189 3300032002 Bacteria 2460
117 Ga0307414_10061458 3300032004 Bacteria 2661
118 Ga0307415_100244254 3300032126 Bacteria 1454
119 Ga0373926_0000392 3300035083 Bacteria 11217
120 Ga0373962_0000430 3300035242 Bacteria 9172
121 Ga0436364_0011633 3300037853 Bacteria 2625
122 Ga0436364_0332195 3300037853 Bacteria 3883
123 Ga0436364_1426524 3300037853 Bacteria 3781
124 Ga0395901_0354406 3300038443 Bacteria 1514
125 Ga0395901_0610590 3300038443 Bacteria 1099
126 Ga0436365_0629737 3300039437 Bacteria 1150
127 Ga0436365_1140191 3300039437 Bacteria 2617
128 Ga0436362_0227359 3300039453 Bacteria 1289
129 Ga0439448_0003538 3300042005 Bacteria 4335
130 Ga0439450_001502 3300042008 Bacteria 3429
131 Ga0439463_003319 3300042016 Bacteria 4079
132 Ga0466961_0001143 3300044693 Bacteria 16299
133 Ga0466961_0104358 3300044693 Bacteria 1785
134 Ga0466957_0025790 3300044842 Bacteria 3485
135 Ga0466959_0126143 3300045049 Bacteria 1817
136 Ga0451576_0029434 3300045051 Bacteria 5877
137 Ga0466967_0074688 3300045976 Bacteria 3045
138 Ga0466967_0111570 3300045976 Bacteria 2513
139 Ga0466967_0121473 3300045976 Bacteria 2414
140 Ga0466967_0504949 3300045976 Bacteria 1187
141 Ga0495582_0150272 3300046473 Bacteria 1322
142 Ga0495584_0101228 3300046491 Bacteria 1456
143 Ga0495630_0019599 3300046517 Bacteria 4975
144 Ga0495644_0090401 3300046523 Bacteria 1155
145 Ga0495609_0024493 3300046538 Bacteria 2769
146 Ga0495658_0036961 3300046683 Bacteria 2697
147 Ga0495613_0118561 3300046689 Bacteria 1902
148 Ga0495636_0068576 3300047318 Bacteria 1510
149 Ga0495677_0022876 3300047445 Bacteria 2268
150 Ga0496102_0010447 3300048905 Bacteria 7988
151 Ga0496104_0008694 3300048907 Bacteria 9031
152 Ga0496105_0029293 3300048908 Bacteria 4506
153 Ga0496106_0121290 3300048909 Bacteria 2044
154 Ga0496107_0053868 3300048910 Bacteria 2902
155 Ga0496107_0089643 3300048910 Bacteria 2246
156 Ga0496108_0016065 3300048911 Bacteria 6103
157 Ga0496109_0000742 3300048912 Bacteria 27105
158 Ga0496109_0072684 3300048912 Bacteria 3160
159 Ga0496109_0497672 3300048912 Bacteria 1150
160 Ga0496110_0000778 3300048913 Bacteria 22185
161 Ga0496110_0006139 3300048913 Bacteria 9476
162 Ga0496111_0000101 3300048914 Bacteria 37061
163 Ga0496111_0001609 3300048914 Bacteria 13060
164 Ga0496111_0203950 3300048914 Bacteria 1469
165 Ga0496112_0029085 3300048915 Bacteria 5342
166 Ga0496112_0030634 3300048915 Bacteria 5209
167 Ga0496113_0033693 3300048916 Bacteria 3732
168 Ga0496115_0327500 3300048918 Bacteria 1252
169 Ga0501032_0048305 3300049569 Bacteria 2873
170 Ga0501033_0013719 3300049570 Bacteria 6165
171 Ga0501033_0125586 3300049570 Bacteria 1860
172 Ga0501036_0039885 3300049572 Bacteria 3972
173 Ga0501037_0160722 3300049573 Bacteria 1601
174 Ga0501038_0019689 3300049574 Bacteria 6076
175 Ga0501039_0071174 3300049575 Bacteria 2702
176 Ga0501040_0112519 3300049576 Bacteria 1904
177 Ga0501040_0114114 3300049576 Bacteria 1891
178 Ga0501041_0326556 3300049577 Bacteria 968
179 Ga0501042_0015913 3300049578 Bacteria 5157
180 Ga0501042_0150518 3300049578 Bacteria 1678
181 Ga0501043_0043085 3300049579 Bacteria 3547
182 Ga0501046_0020041 3300049580 Bacteria 5537
183 Ga0501046_0050566 3300049580 Bacteria 3283
184 Ga0501048_0086530 3300049582 Bacteria 2211
185 Ga0501067_0032469 3300049583 Bacteria 2898
186 Ga0501068_0001499 3300049584 Bacteria 12432
187 Ga0501069_0008188 3300049585 Bacteria 5489
188 Ga0501070_0110502 3300049586 Bacteria 2272
189 Ga0501071_0065163 3300049587 Bacteria 2645
190 Ga0501071_0105827 3300049587 Bacteria 2077
191 Ga0501072_0012936 3300049588 Bacteria 6383
192 Ga0501072_0040008 3300049588 Bacteria 3681
193 Ga0501074_0022144 3300049590 Bacteria 4617
194 Ga0501075_0028545 3300049591 Bacteria 4119
195 Ga0501075_0078367 3300049591 Bacteria 2501
196 Ga0501075_0184916 3300049591 Bacteria 1589
197 Ga0501076_0039393 3300049592 Bacteria 3710
198 Ga0501077_0016109 3300049593 Bacteria 4710
199 Ga0501079_0044542 3300049741 Bacteria 3424
200 Ga0501079_0230983 3300049741 Bacteria 1445
201 Ga0501080_0007095 3300049742 Bacteria 10116
202 Ga0501080_0057675 3300049742 Bacteria 3615
203 Ga0501080_0288617 3300049742 Bacteria 1490
204 Ga0501081_0217360 3300049743 Bacteria 1389
205 Ga0501081_0274942 3300049743 Bacteria 1232
206 Ga0501083_0008766 3300049744 Bacteria 7136
207 Ga0501035_0066253 3300049822 Bacteria 3205
208 Ga0501045_0006088 3300049824 Bacteria 8353
209 Ga0501045_0014535 3300049824 Bacteria 5580
210 nmdc:mga05p37_1903_c1 3300050507 Bacteria 24339
211 nmdc:mga05p37_2495_c1 3300050507 Bacteria 21408
212 nmdc:mga05p37_59383_c1 3300050507 Bacteria 4709
213 nmdc:mga05p37_88885_c1 3300050507 Bacteria 3808
214 nmdc:mga09592_235798_c1 3300050508 Bacteria 1585
215 nmdc:mga09592_43998_c1 3300050508 Bacteria 3757
216 nmdc:mga09592_82_c1 3300050508 Bacteria 55790
217 nmdc:mga0qj67_3509_c1 3300050509 Bacteria 11312
218 nmdc:mga0qj67_39955_c1 3300050509 Bacteria 3686
219 nmdc:mga0qj67_7056_c1 3300050509 Bacteria 8286
220 nmdc:mga06r32_37670_c1 3300050510 Bacteria 4575
221 nmdc:mga06r32_39090_c1 3300050510 Bacteria 4501
222 nmdc:mga06r32_794_c1 3300050510 Bacteria 27944
223 nmdc:mga08y16_144365_c1 3300050511 Bacteria 2474
224 nmdc:mga08y16_1537_c1 3300050511 Bacteria 23198
225 nmdc:mga08y16_22805_c1 3300050511 Bacteria 6607
226 nmdc:mga08y16_275089_c1 3300050511 Bacteria 1738
227 nmdc:mga0n895_62419_c1 3300050512 Bacteria 3683
228 nmdc:mga0n895_88319_c1 3300050512 Bacteria 3100
229 nmdc:mga08x19_12605_c1 3300050514 Bacteria 5098
230 nmdc:mga0a205_28544_c1 3300050515 Bacteria 5335
231 nmdc:mga0a205_9496_c1 3300050515 Bacteria 8899
232 Ga0501084_0121794 3300054114 Bacteria 2193
233 Ga0501082_0043450 3300060353 Bacteria 3875
234 Ga0501082_0105870 3300060353 Bacteria 2433
235 Ga0501082_0191892 3300060353 Bacteria 1777
236 Ga0466962_0047464 3300061719 Bacteria 2052
237 Ga0530510_0012247 3300061734 Bacteria 6020
238 Ga0530510_0129144 3300061734 Bacteria 1858
239 Ga0530510_0192395 3300061734 Bacteria 1514
240 2995728477 2995726249 Bacteria 3470435
241 Ga0436364_1484319
242 JGI25407J50210_10000618
243 Ga0068869_100157331
244 Ga0070666_10176019
245 Ga0070680_100318582
246 Ga0068868_100187305
247 Ga0068868_100329444
248 Ga0070692_10056244
249 Ga0070714_100029860
250 Ga0070714_100084167
251 Ga0070713_100020000
252 Ga0068867_100270616
253 Ga0070707_100003384
254 Ga0070698_100030299
255 Ga0070699_100000352
256 Ga0068857_100009624
257 Ga0068854_100110949
258 Ga0068856_100229123
259 Ga0068856_100320173
260 Ga0068852_100134714
261 Ga0068859_100206912
262 Ga0068864_100099707
263 Ga0068870_10156394
264 Ga0081455_10000397
265 Ga0081455_10003263
266 Ga0081455_10004056
267 Ga0081455_10004265
268 Ga0081455_10008369
269 Ga0081455_10017700
270 Ga0081455_10035430
271 Ga0081455_10167892
272 Ga0081538_10000077
273 Ga0081538_10000099
274 Ga0081538_10001329
275 Ga0081538_10002526
276 Ga0081538_10005876
277 Ga0081538_10010007
278 Ga0081538_10010652
279 Ga0081538_10033422
280 Ga0081540_1000509
281 Ga0070717_10004174
282 Ga0070717_10156197
283 Ga0075428_100003983
284 Ga0075428_100015022
285 Ga0075430_100022147
286 Ga0075430_100025171
287 Ga0075430_100052604
288 Ga0075431_100039158
289 Ga0075431_100043468
290 Ga0075431_100075501
291 Ga0075433_10026286
292 Ga0075433_10039160
293 Ga0075434_100197395
294 Ga0075429_100022777
295 Ga0075429_100046642
296 Ga0075436_100026428
297 Ga0097620_100206916
298 Ga0075435_100056974
299 Ga0111539_10007872
300 Ga0111539_10009677
301 Ga0111539_10021717
302 Ga0111539_10195797
303 Ga0114129_10010631
304 Ga0114129_10019432
305 Ga0114129_10026635
306 Ga0114129_10084511
307 Ga0105248_10027280
308 Ga0105248_10387342
309 Ga0105238_10190237
310 Ga0105246_10305780
311 Ga0157379_10095435
312 Ga0213875_10013105
313 Ga0207643_10078834
314 Ga0207693_10255495
315 Ga0207646_10000216
316 Ga0207687_10202639
317 Ga0207700_10018109
318 Ga0207700_10136324
319 Ga0207706_10109583
320 Ga0207686_10175623
321 Ga0207711_10027974
322 Ga0207689_10125767
323 Ga0207661_10074202
324 Ga0207661_10462630
325 Ga0207679_10090779
326 Ga0207640_10121271
327 Ga0207640_10123119
328 Ga0207677_10383754
329 Ga0207678_10166849
330 Ga0207648_10050002
331 Ga0207648_10321327
332 Ga0207648_10492960
333 Ga0207676_10084350
334 Ga0207674_10003210
335 Ga0207675_100220269
336 Ga0207698_10142925
337 Ga0207428_10009317
338 Ga0207428_10013183
339 Ga0207428_10016118
340 Ga0268265_10346414
341 Ga0307405_10015154
342 Ga0307413_10013938
343 Ga0307413_10318537
344 Ga0307410_10007543
345 Ga0307410_10009411
346 Ga0307410_10183585
347 Ga0307410_10196934
348 Ga0307406_10026371
349 Ga0307406_10062554
350 Ga0307406_10195524
351 Ga0307407_10246238
352 Ga0307409_100045949
353 Ga0307409_100065909
354 Ga0307409_100140155
355 Ga0307416_100007345
356 Ga0307416_100106189
357 Ga0307414_10061458
358 Ga0307415_100244254
359 Ga0373926_0000392
360 Ga0373962_0000430
361 Ga0436364_0011633
362 Ga0436364_0332195
363 Ga0436364_1426524
364 Ga0395901_0354406
365 Ga0395901_0610590
366 Ga0436365_0629737
367 Ga0436365_1140191
368 Ga0436362_0227359
369 Ga0439448_0003538
370 Ga0439450_001502
371 Ga0439463_003319
372 Ga0466961_0001143
373 Ga0466961_0104358
374 Ga0466957_0025790
375 Ga0466959_0126143
376 Ga0451576_0029434
377 Ga0466967_0074688
378 Ga0466967_0111570
379 Ga0466967_0121473
380 Ga0466967_0504949
381 Ga0495582_0150272
382 Ga0495584_0101228
383 Ga0495630_0019599
384 Ga0495644_0090401
385 Ga0495609_0024493
386 Ga0495658_0036961
387 Ga0495613_0118561
388 Ga0495636_0068576
389 Ga0495677_0022876
390 Ga0496102_0010447
391 Ga0496104_0008694
392 Ga0496105_0029293
393 Ga0496106_0121290
394 Ga0496107_0053868
395 Ga0496107_0089643
396 Ga0496108_0016065
397 Ga0496109_0000742
398 Ga0496109_0072684
399 Ga0496109_0497672
400 Ga0496110_0000778
401 Ga0496110_0006139
402 Ga0496111_0000101
403 Ga0496111_0001609
404 Ga0496111_0203950
405 Ga0496112_0029085
406 Ga0496112_0030634
407 Ga0496113_0033693
408 Ga0496115_0327500
409 Ga0501032_0048305
410 Ga0501033_0013719
411 Ga0501033_0125586
412 Ga0501036_0039885
413 Ga0501037_0160722
414 Ga0501038_0019689
415 Ga0501039_0071174
416 Ga0501040_0112519
417 Ga0501040_0114114
418 Ga0501041_0326556
419 Ga0501042_0015913
420 Ga0501042_0150518
421 Ga0501043_0043085
422 Ga0501046_0020041
423 Ga0501046_0050566
424 Ga0501048_0086530
425 Ga0501067_0032469
426 Ga0501068_0001499
427 Ga0501069_0008188
428 Ga0501070_0110502
429 Ga0501071_0065163
430 Ga0501071_0105827
431 Ga0501072_0012936
432 Ga0501072_0040008
433 Ga0501074_0022144
434 Ga0501075_0028545
435 Ga0501075_0078367
436 Ga0501075_0184916
437 Ga0501076_0039393
438 Ga0501077_0016109
439 Ga0501079_0044542
440 Ga0501079_0230983
441 Ga0501080_0007095
442 Ga0501080_0057675
443 Ga0501080_0288617
444 Ga0501081_0217360
445 Ga0501081_0274942
446 Ga0501083_0008766
447 Ga0501035_0066253
448 Ga0501045_0006088
449 Ga0501045_0014535
450 nmdc:mga05p37_1903_c1
451 nmdc:mga05p37_2495_c1
452 nmdc:mga05p37_59383_c1
453 nmdc:mga05p37_88885_c1
454 nmdc:mga09592_235798_c1
455 nmdc:mga09592_43998_c1
456 nmdc:mga09592_82_c1
457 nmdc:mga0qj67_3509_c1
458 nmdc:mga0qj67_39955_c1
459 nmdc:mga0qj67_7056_c1
460 nmdc:mga06r32_37670_c1
461 nmdc:mga06r32_39090_c1
462 nmdc:mga06r32_794_c1
463 nmdc:mga08y16_144365_c1
464 nmdc:mga08y16_1537_c1
465 nmdc:mga08y16_22805_c1
466 nmdc:mga08y16_275089_c1
467 nmdc:mga0n895_62419_c1
468 nmdc:mga0n895_88319_c1
469 nmdc:mga08x19_12605_c1
470 nmdc:mga0a205_28544_c1
471 nmdc:mga0a205_9496_c1
472 Ga0501084_0121794
473 Ga0501082_0043450
474 Ga0501082_0105870
475 Ga0501082_0191892
476 Ga0466962_0047464
477 Ga0530510_0012247
478 Ga0530510_0129144
479 Ga0530510_0192395
480 2995728477

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05544

Pro_racemase

Proline racemase

83

399

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4q2h-assembly1.cif.gz_B crystal structure of probable proline racemase from agrobacterium radiobacter k84, target efi-506561, with bound carbonate 0.9366 3 314
8a4r-assembly1.cif.gz_CCC-2 proline racemase (pror) from the gram-positive bacterium acetoanaerobium sticklandii from isotropic orthorhombic data at 3.59 a 0.9285 2 314
6r77-assembly1.cif.gz_B crystal structure of trans-3-hydroxy-l-proline dehydratase in complex with substrate - closed conformation 0.9255 1 322
6r76-assembly2.cif.gz_C crystal structure of trans-3-hydroxy-l-proline dehydratase from thermococcus litoralis - open conformation 0.9237 1 322
6r77-assembly1.cif.gz_B crystal structure of trans-3-hydroxy-l-proline dehydratase in complex with substrate - closed conformation 0.9227 1 322
ID Description Score Start End Superfamily
af_A0A0G2L1A2_13_139_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9237 3 127 3.10.310.10
4q2hB01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9195 3 140 3.10.310.10
6hjfA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9181 2 140 3.10.310.10
af_Q868H8_133_298_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9164 142 282 3.10.310.10
af_Q4DA80_75_217_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9129 3 140 3.10.310.10
ID Description Score Start End GO Terms
AF-A0A7V9KBR6-F1-model_v4 Proline racemase family protein 0.9733 3 322 GO:0016836
AF-A0A352AYU9-F1-model_v4 Proline racemase 0.9712 3 276 GO:0016836
AF-A0A656THB8-F1-model_v4 deleted 0.9654 3 282
AF-A0A7K2Q184-F1-model_v4 Proline racemase 0.9624 3 171 GO:0016836
AF-A0A6J7G2Y6-F1-model_v4 Unannotated protein 0.9557 59 322 GO:0016836

Map