F352994

General Info

Members Datasets Scaffolds Average Seq Length
240 157 480 214

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100199977|Ga0307408_1001999772
Length 258
Sequence VRRRAHLPRVGPAHSQKSAIKPWLKGQWSIPPKQDASFVWRMEDVLEVYTRPYDPSRPQVCLDEKSKQLVREVREPLAAKPGRAARHDYEYERNGTANLFIVCEPLAGWRHISVTQRRTKLDWAHCIKELVDLHYPEALKIVLVMDNLNTHTPAALYEAFAPTEARRLLERLEIHYTPKHGSWLNMAEIELSVLARQCLEQRIPDQQTLAEEVGAWETERNAYESSIDWRFRTEEARIKLKHLYPEIVQEPSYDPNLP

Samples

Sample ID Description Type Environment
1 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
2 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
3 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
4 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
18 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
21 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
22 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
23 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
25 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
26 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
34 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
35 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
36 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
37 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
38 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
39 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
40 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
41 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
42 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
43 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
44 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
45 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
46 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
47 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
48 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
49 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
50 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
51 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
52 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
55 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
56 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
57 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
58 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
59 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
60 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
65 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
66 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
67 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
68 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
71 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
74 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
75 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
76 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
77 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
78 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
79 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
80 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
81 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
82 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
83 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
84 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
87 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
88 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
89 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
90 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
91 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
92 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
98 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
99 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
100 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
103 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
104 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
105 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
106 3300049518 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_B_5_control Metagenome Rhizosphere
107 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
108 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
109 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
110 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
112 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
113 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
114 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
115 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
116 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
117 3300049659 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control Metagenome Rhizosphere
118 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
119 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
120 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
121 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
122 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
123 3300049666 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A4_B_2_control Metagenome Rhizosphere
124 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
125 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
126 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
127 3300049676 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_A_3_control Metagenome Rhizosphere
128 3300049678 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought Metagenome Rhizosphere
129 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
130 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
131 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
132 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
133 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
134 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
135 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
136 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
137 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
138 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
139 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049757 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_B_2_control Metagenome Rhizosphere
142 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
143 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
144 3300049770 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control Metagenome Rhizosphere
145 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
146 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
147 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
150 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.67
Metatranscriptomes 3.33
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.67
Rhizosphere 94.58
Stem 0
Stem Tuber 0
Unclassified 14.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307408_100199977 3300031548 Bacteria 1616
2 Ga0070691_10261861 3300005341 Bacteria 931
3 Ga0070687_100103140 3300005343 Bacteria 1601
4 Ga0070692_10171318 3300005345 Bacteria 1252
5 Ga0070714_100336754 3300005435 Bacteria 1414
6 Ga0070713_100349565 3300005436 Bacteria 1371
7 Ga0070708_100006610 3300005445 Bacteria 9228
8 Ga0070708_100011995 3300005445 Bacteria 7063
9 Ga0070708_100014598 3300005445 Bacteria 6470
10 Ga0070708_100442475 3300005445 Bacteria 1226
11 Ga0070708_100798214 3300005445 Unclassified 887
12 Ga0070706_100047044 3300005467 Unclassified 3981
13 Ga0070706_100158740 3300005467 Bacteria 2111
14 Ga0070706_100175393 3300005467 Bacteria 2001
15 Ga0070707_100018251 3300005468 Bacteria 6601
16 Ga0070707_100349344 3300005468 Bacteria 1436
17 Ga0070707_100780383 3300005468 Unclassified 919
18 Ga0070698_100002448 3300005471 Bacteria 20474
19 Ga0070698_100010910 3300005471 Bacteria 9665
20 Ga0070698_100154856 3300005471 Bacteria 2238
21 Ga0070698_100189995 3300005471 Bacteria 1992
22 Ga0070699_100003049 3300005518 Bacteria 14864
23 Ga0070699_100035131 3300005518 Bacteria 4332
24 Ga0070699_100463054 3300005518 Bacteria 1150
25 Ga0070697_100030221 3300005536 Bacteria 4351
26 Ga0070697_100489694 3300005536 Bacteria 1074
27 Ga0068857_100363996 3300005577 Bacteria 1341
28 Ga0081538_10070884 3300005981 Bacteria 1921
29 Ga0081539_10058846 3300005985 Bacteria 2119
30 Ga0081539_10247405 3300005985 Bacteria 794
31 Ga0070717_10029998 3300006028 Bacteria 4369
32 Ga0070717_10168608 3300006028 Bacteria 1903
33 Ga0075433_10110318 3300006852 Bacteria 2441
34 Ga0075434_100459624 3300006871 Bacteria 1294
35 Ga0075429_100468432 3300006880 Bacteria 1104
36 Ga0157371_10085726 3300013102 Bacteria 2231
37 Ga0157369_10330379 3300013105 Bacteria 1584
38 Ga0157372_10067861 3300013307 Bacteria 4009
39 Ga0206356_10907568 3300020070 Bacteria 4054
40 Ga0213873_10028806 3300021358 Bacteria 1364
41 Ga0213876_10122925 3300021384 Bacteria 1378
42 Ga0224712_10005986 3300022467 Bacteria 3435
43 Ga0224712_10023649 3300022467 Unclassified 2136
44 Ga0224712_10070770 3300022467 Bacteria 1415
45 Ga0207684_10026759 3300025910 Bacteria 4917
46 Ga0207684_10039255 3300025910 Unclassified 4016
47 Ga0207684_10097320 3300025910 Unclassified 2512
48 Ga0207684_10135072 3300025910 Bacteria 2118
49 Ga0207662_10193150 3300025918 Bacteria 1314
50 Ga0207652_10383093 3300025921 Bacteria 1269
51 Ga0207646_10003998 3300025922 Bacteria 16327
52 Ga0207646_10017584 3300025922 Bacteria 6683
53 Ga0207646_10142760 3300025922 Bacteria 2157
54 Ga0207700_10108230 3300025928 Unclassified 2231
55 Ga0207674_10127624 3300026116 Bacteria 2508
56 Ga0207428_10207432 3300027907 Bacteria 1473
57 Ga0265337_1046209 3300028556 Bacteria 1237
58 Ga0265323_10068033 3300028653 Bacteria 1223
59 Ga0265324_10051569 3300029957 Bacteria 1413
60 Ga0265328_10076059 3300031239 Bacteria 1235
61 Ga0265329_10023564 3300031242 Bacteria 2049
62 Ga0265340_10088889 3300031247 Bacteria 1446
63 Ga0265331_10147936 3300031250 Bacteria 1067
64 Ga0316575_10022379 3300031665 Bacteria 2438
65 Ga0316579_10081845 3300031691 Bacteria 1537
66 Ga0316576_10267993 3300031727 Bacteria 1280
67 Ga0316578_10145624 3300031728 Bacteria 1427
68 Ga0316578_10231600 3300031728 Bacteria 1109
69 Ga0307405_10053390 3300031731 Bacteria 2517
70 Ga0316577_10042647 3300031733 Bacteria 2538
71 Ga0307413_10288870 3300031824 Unclassified 1237
72 Ga0307413_10323838 3300031824 Bacteria 1178
73 Ga0307413_10484775 3300031824 Bacteria 989
74 Ga0307410_10175470 3300031852 Bacteria 1618
75 Ga0307410_10557581 3300031852 Bacteria 950
76 Ga0307406_10092490 3300031901 Bacteria 2039
77 Ga0307406_10131849 3300031901 Bacteria 1755
78 Ga0307406_10215005 3300031901 Bacteria 1425
79 Ga0307407_10054257 3300031903 Bacteria 2310
80 Ga0307407_10240150 3300031903 Bacteria 1235
81 Ga0307407_10240174 3300031903 Unclassified 1235
82 Ga0307407_10290788 3300031903 Bacteria 1135
83 Ga0307412_10045468 3300031911 Unclassified 2870
84 Ga0307412_10113642 3300031911 Bacteria 1937
85 Ga0307412_10368413 3300031911 Unclassified 1159
86 Ga0307409_100052733 3300031995 Bacteria 3120
87 Ga0307409_100261892 3300031995 Unclassified 1587
88 Ga0307409_100364669 3300031995 Bacteria 1368
89 Ga0307409_100733435 3300031995 Bacteria 990
90 Ga0307416_100144452 3300032002 Unclassified 2169
91 Ga0307416_100226542 3300032002 Bacteria 1798
92 Ga0307416_100568272 3300032002 Bacteria 1209
93 Ga0307414_10027271 3300032004 Bacteria 3689
94 Ga0307414_10204129 3300032004 Bacteria 1610
95 Ga0307414_10286801 3300032004 Bacteria 1386
96 Ga0307411_10115183 3300032005 Unclassified 1933
97 Ga0307411_10146551 3300032005 Bacteria 1748
98 Ga0307411_10149921 3300032005 Bacteria 1731
99 Ga0307411_10311150 3300032005 Bacteria 1267
100 Ga0307411_10389723 3300032005 Unclassified 1148
101 Ga0307415_100145057 3300032126 Bacteria 1818
102 Ga0307415_100159081 3300032126 Bacteria 1748
103 Ga0307415_100221689 3300032126 Bacteria 1516
104 Ga0307415_100357400 3300032126 Bacteria 1232
105 Ga0307415_100788171 3300032126 Unclassified 866
106 Ga0307415_100922504 3300032126 Bacteria 806
107 Ga0316583_10085161 3300032133 Bacteria 1104
108 Ga0316585_10024981 3300032137 Bacteria 1851
109 Ga0316585_10082792 3300032137 Bacteria 1046
110 Ga0316580_10045926 3300032139 Bacteria 1346
111 Ga0316592_1021075 3300033524 Bacteria 1386
112 Ga0316586_1014048 3300033527 Bacteria 1260
113 Ga0316588_1014945 3300033528 Bacteria 1705
114 Ga0316596_1031707 3300033541 Bacteria 1373
115 Ga0316574_0206055 3300035398 Bacteria 1262
116 Ga0373931_0174700 3300035691 Bacteria 1268
117 Ga0316582_0212890 3300036647 Bacteria 1320
118 Ga0316582_0487223 3300036647 Unclassified 850
119 Ga0316582_0518355 3300036647 Bacteria 821
120 Ga0316584_0525195 3300036712 Unclassified 829
121 Ga0316581_0139364 3300037588 Unclassified 748
122 Ga0436364_0608002 3300037853 Bacteria 1284
123 Ga0436364_0884071 3300037853 Unclassified 862
124 Ga0400483_116523 3300039062 Bacteria 2040
125 Ga0400483_212734 3300039062 Bacteria 1335
126 Ga0400489_81268 3300039093 Bacteria 1352
127 Ga0436365_0986506 3300039437 Bacteria 1546
128 Ga0436365_1098080 3300039437 Bacteria 1525
129 Ga0436363_0777339 3300039450 Unclassified 1404
130 Ga0436362_0325590 3300039453 Bacteria 1857
131 Ga0439454_024175 3300042011 Bacteria 916
132 Ga0439458_0022444 3300042157 Bacteria 1466
133 Ga0439444_0011859 3300042437 Bacteria 1419
134 Ga0451577_0239075 3300042876 Unclassified 1643
135 Ga0466969_0052654 3300044656 Bacteria 1999
136 Ga0466969_0085586 3300044656 Bacteria 1498
137 Ga0466972_0067705 3300044658 Bacteria 1705
138 Ga0466965_0068424 3300044683 Bacteria 1783
139 Ga0466966_0039893 3300044684 Bacteria 3022
140 Ga0466966_0457134 3300044684 Unclassified 768
141 Ga0466961_0024276 3300044693 Bacteria 3900
142 Ga0466961_0153012 3300044693 Bacteria 1439
143 Ga0466961_0378020 3300044693 Bacteria 860
144 Ga0466963_0528299 3300044694 Bacteria 833
145 Ga0453684_0208503 3300044712 Bacteria 2273
146 Ga0453684_0597006 3300044712 Bacteria 1210
147 Ga0466971_0128067 3300044719 Bacteria 1177
148 Ga0466971_0155043 3300044719 Bacteria 1070
149 Ga0466971_0259963 3300044719 Unclassified 828
150 Ga0466968_0083455 3300044735 Bacteria 1407
151 Ga0466970_0091682 3300044765 Bacteria 1649
152 Ga0466970_0125356 3300044765 Bacteria 1408
153 Ga0466957_0121178 3300044842 Unclassified 1667
154 Ga0466957_0181038 3300044842 Bacteria 1376
155 Ga0466959_0000607 3300045049 Bacteria 20899
156 Ga0466959_0176854 3300045049 Bacteria 1494
157 Ga0451576_0354719 3300045051 Unclassified 1535
158 Ga0466958_0071053 3300045836 Unclassified 2131
159 Ga0466958_0184489 3300045836 Bacteria 1324
160 Ga0495592_0265143 3300046454 Bacteria 1129
161 Ga0495628_0265702 3300046516 Bacteria 1277
162 Ga0495630_0141591 3300046517 Bacteria 1829
163 Ga0495652_0250113 3300046529 Bacteria 1314
164 Ga0495640_0145475 3300046533 Bacteria 1525
165 Ga0495645_0493722 3300046543 Bacteria 766
166 Ga0495634_0250193 3300046642 Bacteria 1084
167 Ga0496110_0246078 3300048913 Bacteria 1627
168 Ga0496112_0685179 3300048915 Bacteria 953
169 Ga0496113_0342543 3300048916 Bacteria 1199
170 Ga0496114_0079175 3300048917 Bacteria 2773
171 Ga0501291_005239 3300049514 Bacteria 1685
172 Ga0501294_003335 3300049517 Bacteria 1515
173 Ga0501295_016775 3300049518 Bacteria 1276
174 Ga0501298_020754 3300049521 Bacteria 1226
175 Ga0501299_013785 3300049522 Bacteria 1398
176 Ga0501300_013485 3300049523 Bacteria 1193
177 Ga0501038_0207629 3300049574 Bacteria 1569
178 Ga0501076_0578750 3300049592 Bacteria 926
179 Ga0501199_006846 3300049650 Bacteria 1168
180 Ga0501199_011436 3300049650 Bacteria 960
181 Ga0501202_028452 3300049652 Bacteria 1154
182 Ga0501202_043788 3300049652 Bacteria 974
183 Ga0501206_010710 3300049653 Bacteria 1231
184 Ga0501206_011139 3300049653 Bacteria 1212
185 Ga0501208_009230 3300049655 Bacteria 1355
186 Ga0501209_032885 3300049656 Bacteria 1327
187 Ga0501209_086354 3300049656 Bacteria 909
188 Ga0501209_101556 3300049656 Bacteria 844
189 Ga0501214_030863 3300049659 Bacteria 735
190 Ga0501216_016278 3300049660 Bacteria 1260
191 Ga0501217_045488 3300049661 Bacteria 1131
192 Ga0501217_152835 3300049661 Unclassified 691
193 Ga0501223_016566 3300049663 Bacteria 1456
194 Ga0501224_010735 3300049664 Bacteria 1343
195 Ga0501227_025306 3300049665 Bacteria 1391
196 Ga0501228_009041 3300049666 Bacteria 966
197 Ga0501233_030422 3300049668 Bacteria 1216
198 Ga0501235_011232 3300049669 Bacteria 1962
199 Ga0501235_024179 3300049669 Bacteria 1356
200 Ga0501243_013169 3300049675 Bacteria 1310
201 Ga0501246_008705 3300049676 Bacteria 903
202 Ga0501248_001990 3300049678 Bacteria 1353
203 Ga0501249_029855 3300049679 Bacteria 1213
204 Ga0501252_014891 3300049682 Bacteria 966
205 Ga0501253_024344 3300049683 Bacteria 1097
206 Ga0501257_036053 3300049686 Bacteria 1204
207 Ga0501259_014874 3300049688 Bacteria 1323
208 Ga0501261_004641 3300049690 Unclassified 1706
209 Ga0501261_009658 3300049690 Bacteria 1261
210 Ga0501261_023732 3300049690 Unclassified 894
211 Ga0501219_004614 3300049703 Bacteria 980
212 Ga0501221_006322 3300049704 Bacteria 2000
213 Ga0501221_046416 3300049704 Bacteria 965
214 Ga0501221_050071 3300049704 Bacteria 939
215 Ga0501225_0038449 3300049705 Bacteria 1319
216 Ga0501225_0059756 3300049705 Bacteria 1071
217 Ga0501234_016179 3300049707 Bacteria 1176
218 Ga0501234_029775 3300049707 Bacteria 880
219 Ga0501245_023871 3300049708 Bacteria 974
220 Ga0501079_0869420 3300049741 Unclassified 710
221 Ga0501232_004119 3300049757 Bacteria 1370
222 Ga0501268_012724 3300049765 Bacteria 1349
223 Ga0501270_041149 3300049767 Bacteria 805
224 Ga0501273_004232 3300049770 Bacteria 1568
225 Ga0501279_009762 3300049775 Bacteria 1288
226 Ga0501280_013647 3300049776 Bacteria 1150
227 Ga0501283_006203 3300049779 Bacteria 1667
228 Ga0501283_009116 3300049779 Bacteria 1443
229 Ga0501044_0046199 3300049823 Unclassified 4510
230 Ga0501204_004205 3300049850 Bacteria 1546
231 Ga0501212_007608 3300049851 Bacteria 1490
232 Ga0501212_008284 3300049851 Unclassified 1443
233 Ga0501212_012407 3300049851 Bacteria 1239
234 nmdc:mga09592_400901_c1 3300050508 Unclassified 1186
235 nmdc:mga0qj67_357585_c1 3300050509 Bacteria 1180
236 nmdc:mga08y16_190587_c1 3300050511 Bacteria 2127
237 nmdc:mga0n895_368785_c1 3300050512 Bacteria 1454
238 nmdc:mga0a205_203451_c1 3300050515 Bacteria 1870
239 Ga0466962_0100261 3300061719 Bacteria 1390
240 Ga0530510_0252552 3300061734 Bacteria 1314
241 Ga0307408_100199977
242 Ga0070691_10261861
243 Ga0070687_100103140
244 Ga0070692_10171318
245 Ga0070714_100336754
246 Ga0070713_100349565
247 Ga0070708_100006610
248 Ga0070708_100011995
249 Ga0070708_100014598
250 Ga0070708_100442475
251 Ga0070708_100798214
252 Ga0070706_100047044
253 Ga0070706_100158740
254 Ga0070706_100175393
255 Ga0070707_100018251
256 Ga0070707_100349344
257 Ga0070707_100780383
258 Ga0070698_100002448
259 Ga0070698_100010910
260 Ga0070698_100154856
261 Ga0070698_100189995
262 Ga0070699_100003049
263 Ga0070699_100035131
264 Ga0070699_100463054
265 Ga0070697_100030221
266 Ga0070697_100489694
267 Ga0068857_100363996
268 Ga0081538_10070884
269 Ga0081539_10058846
270 Ga0081539_10247405
271 Ga0070717_10029998
272 Ga0070717_10168608
273 Ga0075433_10110318
274 Ga0075434_100459624
275 Ga0075429_100468432
276 Ga0157371_10085726
277 Ga0157369_10330379
278 Ga0157372_10067861
279 Ga0206356_10907568
280 Ga0213873_10028806
281 Ga0213876_10122925
282 Ga0224712_10005986
283 Ga0224712_10023649
284 Ga0224712_10070770
285 Ga0207684_10026759
286 Ga0207684_10039255
287 Ga0207684_10097320
288 Ga0207684_10135072
289 Ga0207662_10193150
290 Ga0207652_10383093
291 Ga0207646_10003998
292 Ga0207646_10017584
293 Ga0207646_10142760
294 Ga0207700_10108230
295 Ga0207674_10127624
296 Ga0207428_10207432
297 Ga0265337_1046209
298 Ga0265323_10068033
299 Ga0265324_10051569
300 Ga0265328_10076059
301 Ga0265329_10023564
302 Ga0265340_10088889
303 Ga0265331_10147936
304 Ga0316575_10022379
305 Ga0316579_10081845
306 Ga0316576_10267993
307 Ga0316578_10145624
308 Ga0316578_10231600
309 Ga0307405_10053390
310 Ga0316577_10042647
311 Ga0307413_10288870
312 Ga0307413_10323838
313 Ga0307413_10484775
314 Ga0307410_10175470
315 Ga0307410_10557581
316 Ga0307406_10092490
317 Ga0307406_10131849
318 Ga0307406_10215005
319 Ga0307407_10054257
320 Ga0307407_10240150
321 Ga0307407_10240174
322 Ga0307407_10290788
323 Ga0307412_10045468
324 Ga0307412_10113642
325 Ga0307412_10368413
326 Ga0307409_100052733
327 Ga0307409_100261892
328 Ga0307409_100364669
329 Ga0307409_100733435
330 Ga0307416_100144452
331 Ga0307416_100226542
332 Ga0307416_100568272
333 Ga0307414_10027271
334 Ga0307414_10204129
335 Ga0307414_10286801
336 Ga0307411_10115183
337 Ga0307411_10146551
338 Ga0307411_10149921
339 Ga0307411_10311150
340 Ga0307411_10389723
341 Ga0307415_100145057
342 Ga0307415_100159081
343 Ga0307415_100221689
344 Ga0307415_100357400
345 Ga0307415_100788171
346 Ga0307415_100922504
347 Ga0316583_10085161
348 Ga0316585_10024981
349 Ga0316585_10082792
350 Ga0316580_10045926
351 Ga0316592_1021075
352 Ga0316586_1014048
353 Ga0316588_1014945
354 Ga0316596_1031707
355 Ga0316574_0206055
356 Ga0373931_0174700
357 Ga0316582_0212890
358 Ga0316582_0487223
359 Ga0316582_0518355
360 Ga0316584_0525195
361 Ga0316581_0139364
362 Ga0436364_0608002
363 Ga0436364_0884071
364 Ga0400483_116523
365 Ga0400483_212734
366 Ga0400489_81268
367 Ga0436365_0986506
368 Ga0436365_1098080
369 Ga0436363_0777339
370 Ga0436362_0325590
371 Ga0439454_024175
372 Ga0439458_0022444
373 Ga0439444_0011859
374 Ga0451577_0239075
375 Ga0466969_0052654
376 Ga0466969_0085586
377 Ga0466972_0067705
378 Ga0466965_0068424
379 Ga0466966_0039893
380 Ga0466966_0457134
381 Ga0466961_0024276
382 Ga0466961_0153012
383 Ga0466961_0378020
384 Ga0466963_0528299
385 Ga0453684_0208503
386 Ga0453684_0597006
387 Ga0466971_0128067
388 Ga0466971_0155043
389 Ga0466971_0259963
390 Ga0466968_0083455
391 Ga0466970_0091682
392 Ga0466970_0125356
393 Ga0466957_0121178
394 Ga0466957_0181038
395 Ga0466959_0000607
396 Ga0466959_0176854
397 Ga0451576_0354719
398 Ga0466958_0071053
399 Ga0466958_0184489
400 Ga0495592_0265143
401 Ga0495628_0265702
402 Ga0495630_0141591
403 Ga0495652_0250113
404 Ga0495640_0145475
405 Ga0495645_0493722
406 Ga0495634_0250193
407 Ga0496110_0246078
408 Ga0496112_0685179
409 Ga0496113_0342543
410 Ga0496114_0079175
411 Ga0501291_005239
412 Ga0501294_003335
413 Ga0501295_016775
414 Ga0501298_020754
415 Ga0501299_013785
416 Ga0501300_013485
417 Ga0501038_0207629
418 Ga0501076_0578750
419 Ga0501199_006846
420 Ga0501199_011436
421 Ga0501202_028452
422 Ga0501202_043788
423 Ga0501206_010710
424 Ga0501206_011139
425 Ga0501208_009230
426 Ga0501209_032885
427 Ga0501209_086354
428 Ga0501209_101556
429 Ga0501214_030863
430 Ga0501216_016278
431 Ga0501217_045488
432 Ga0501217_152835
433 Ga0501223_016566
434 Ga0501224_010735
435 Ga0501227_025306
436 Ga0501228_009041
437 Ga0501233_030422
438 Ga0501235_011232
439 Ga0501235_024179
440 Ga0501243_013169
441 Ga0501246_008705
442 Ga0501248_001990
443 Ga0501249_029855
444 Ga0501252_014891
445 Ga0501253_024344
446 Ga0501257_036053
447 Ga0501259_014874
448 Ga0501261_004641
449 Ga0501261_009658
450 Ga0501261_023732
451 Ga0501219_004614
452 Ga0501221_006322
453 Ga0501221_046416
454 Ga0501221_050071
455 Ga0501225_0038449
456 Ga0501225_0059756
457 Ga0501234_016179
458 Ga0501234_029775
459 Ga0501245_023871
460 Ga0501079_0869420
461 Ga0501232_004119
462 Ga0501268_012724
463 Ga0501270_041149
464 Ga0501273_004232
465 Ga0501279_009762
466 Ga0501280_013647
467 Ga0501283_006203
468 Ga0501283_009116
469 Ga0501044_0046199
470 Ga0501204_004205
471 Ga0501212_007608
472 Ga0501212_008284
473 Ga0501212_012407
474 nmdc:mga09592_400901_c1
475 nmdc:mga0qj67_357585_c1
476 nmdc:mga08y16_190587_c1
477 nmdc:mga0n895_368785_c1
478 nmdc:mga0a205_203451_c1
479 Ga0466962_0100261
480 Ga0530510_0252552

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13358

DDE_3

DDE superfamily endonuclease

58

210

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vq7-assembly1.cif.gz_B hiv-1 in core domain in complex with 4-(1h-pyrrol-1-yl)aniline 0.7005 12 176
7ouf-assembly1.cif.gz_D structure of the stlv intasome:b56 complex bound to the strand-transfer inhibitor xz450 0.6867 5 139
3l3u-assembly1.cif.gz_B crystal structure of the hiv-1 integrase core domain to 1.4a 0.6811 13 176
3vqp-assembly1.cif.gz_A hiv-1 in core domain in complex with 2,3-dihydro-1,4-benzodioxin-5-ylmethanol 0.6803 12 176
2x6n-assembly3.cif.gz_D human foamy virus integrase - catalytic core. manganese-bound structure. 0.6774 11 176
ID Description Score Start End Superfamily
af_P35443_731_958_2.60.120.200 Mainly Beta;Sandwich;Jelly Rolls; 0.7616 51 75 2.60.120.200
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7457 17 175 3.30.420.10
af_P0CF56_119_291_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.7455 17 178 3.30.420.10
af_P19769_115_278_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.6858 16 198 3.30.420.10
af_P0CF90_232_378_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.6824 56 178 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A0M8VG75-F1-model_v4 Transposase 0.9742 10 181
AF-F8N6W1-F1-model_v4 Tc1-like transposase DDE domain-containing protein 0.974 1 183
AF-A0A0F8WFF6-F1-model_v4 Tc1-like transposase DDE domain-containing protein 0.9736 1 186
AF-X0RTN5-F1-model_v4 Tc1-like transposase DDE domain-containing protein 0.9725 1 199 GO:0003676
AF-A0A358Y2R3-F1-model_v4 IS630 family transposase 0.9702 2 180

Map