F352318

General Info

Members Datasets Scaffolds Average Seq Length
239 193 478 310

Family's Representative Sequence

Representative Sequence 3300049586|Ga0501070_0034542|Ga0501070_0034542_1567_2607
Length 346
Sequence MATQTDPPTLPSSAGTLLDAVGNTPLVQLPHLFPGPARVYAKLEYYNPTGSIKDRIARHIIRQAEASGQLKPGGTIVEATSGNTGAALAAVAAAKGYRAILTMPDKVSPEKRDAARTYGAEVIVCPGAPPDAPQHYMQKGRAIAASIPDAVFIDQYNNPWNVEAHYLTTGPEIWKQIGGDIDFFVASASTGGTITGAGKYLKEHKPDVHVLMPDPIGSIYECYFRTRKVDPAVRRPYQVEGIGKDMLAGCIDFAVIDEVMTLSDAEAFDAARQLAAQEGILGGGSAGANIWGCMALARRIDTPKVIVTVIPDSGLKYLSKFYNPEWLASANYTRRETEAAQEVLAD

Samples

Sample ID Description Type Environment
1 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
5 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
6 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
9 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
10 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
11 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
12 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
13 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
14 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
15 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
16 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
17 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
18 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
19 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
27 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
28 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
29 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
34 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
35 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
36 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
48 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
49 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
50 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
52 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
53 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
54 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
55 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
56 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
57 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
58 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
59 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
60 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
61 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
62 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
63 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
66 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
67 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
68 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
69 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
70 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
71 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
72 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
73 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
74 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
75 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
76 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
77 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
78 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
79 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
82 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
83 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
84 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
85 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
86 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
87 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
88 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
89 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
90 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
91 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
92 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
93 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
94 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
95 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
96 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
97 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
98 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
99 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
100 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
101 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
102 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
103 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
104 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
105 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
106 2643221729 Bacillus sp. Root11 Isolate Unclassified
107 2643221730 Bacillus sp. Root131 Isolate Unclassified
108 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
109 2671180694 Paenibacillus sp. A3 Isolate Unclassified
110 2684622632 Bacillus cereus 905 Isolate Unclassified
111 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
112 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
113 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
114 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
115 2738541358 Bacillus sp. OV752 Isolate Unclassified
116 2738543006 Bacillus sp. OK077 Isolate Unclassified
117 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
118 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
119 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
120 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
121 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
122 2818991459 Paenibacillus sp. 597 Isolate Unclassified
123 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
124 2842682962 Bacillus sp. R-72492 Isolate Unclassified
125 2849139964 Bacillus sp. R-71875 Isolate Unclassified
126 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
127 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
128 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
129 2857472729 Cohnella sp. R-74144 Isolate Unclassified
130 2857581216 Bacillus sp. R-71922 Isolate Unclassified
131 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
132 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
133 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
134 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
135 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
136 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
137 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
138 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
139 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
140 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
141 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
142 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
143 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
144 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
145 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
146 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
147 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
148 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
149 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
150 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
151 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
152 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
153 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
154 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
155 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
156 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
157 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
158 2938917290 Bacillus sp. CR71 Isolate Unclassified
159 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
160 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
161 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
162 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
163 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
164 2965761152 Bacillus sp. COPE52 Isolate Unclassified
165 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
166 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
167 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
168 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
169 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
170 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
171 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
172 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
173 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
174 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
175 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
176 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
177 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
178 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
179 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
180 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
181 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
182 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
183 8022792930 Bacillus sp. Xin Isolate Rhizosphere
184 8023438354 Bacillus sp. BH2 Isolate Unclassified
185 8023444577 Bacillus sp. BH32 Isolate Unclassified
186 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
187 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
188 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
189 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
190 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
191 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
192 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
193 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 54.39
Metatranscriptomes 0.84
Isolates 44.77

Biome Distribution

Category Percentage (%)
Aerial Root 0.84
Bulb 0
Endosphere 17.99
Nodule 0.84
Rhizoplane 2.09
Rhizosphere 44.35
Stem 0
Stem Tuber 0
Unclassified 3.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501070_0034542 3300049586 Bacteria 4227
2 JGI25159J45721_1004452 3300002987 Bacteria 4650
3 JGI25159J45721_1012421 3300002987 Bacteria 2033
4 JGI25151J46595_10001649 3300003187 Bacteria 14685
5 JGI25151J46595_10002664 3300003187 Bacteria 10471
6 JGI25151J46595_10012247 3300003187 Bacteria 3907
7 JGI25151J46595_10013169 3300003187 Bacteria 3731
8 Ga0055538_1000383 3300003751 Bacteria 18178
9 Ga0055532_1001477 3300003758 Bacteria 6521
10 Ga0055541_1001798 3300003841 Bacteria 4482
11 Ga0055541_1005037 3300003841 Bacteria 2346
12 Ga0070667_100036374 3300005367 Unclassified 4128
13 Ga0068860_100028618 3300005843 Bacteria 5364
14 Ga0075363_100000102 3300006048 Bacteria 19118
15 Ga0075362_10104912 3300006177 Bacteria 1325
16 Ga0075367_10027429 3300006178 Bacteria 3240
17 Ga0075369_10043668 3300006186 Bacteria 1924
18 Ga0075427_10007731 3300006194 Bacteria 1583
19 Ga0075370_10000183 3300006353 Bacteria 21842
20 Ga0075434_100108533 3300006871 Bacteria 2786
21 Ga0075429_100014772 3300006880 Bacteria 6767
22 Ga0105251_10014755 3300009011 Bacteria 4303
23 Ga0105244_10010563 3300009036 Bacteria 5593
24 Ga0105244_10018880 3300009036 Bacteria 3861
25 Ga0105244_10023767 3300009036 Bacteria 3355
26 Ga0105250_10006322 3300009092 Bacteria 5186
27 Ga0105250_10007684 3300009092 Bacteria 4621
28 Ga0105250_10029242 3300009092 Bacteria 2218
29 Ga0105240_10012724 3300009093 Bacteria 11597
30 Ga0105248_10318304 3300009177 Bacteria 1752
31 Ga0105237_10000104 3300009545 Bacteria 118238
32 Ga0105237_10000706 3300009545 Bacteria 46212
33 Ga0105239_10005210 3300010375 Bacteria 15298
34 Ga0105246_10025860 3300011119 Bacteria 3828
35 Ga0105246_10239038 3300011119 Bacteria 1435
36 Ga0157370_10194763 3300013104 Bacteria 1881
37 Ga0163162_10000057 3300013306 Bacteria 109241
38 Ga0163162_10066715 3300013306 Bacteria 3647
39 Ga0182008_10000135 3300014497 Bacteria 55864
40 Ga0157379_10319958 3300014968 Bacteria 1416
41 Ga0224712_10142718 3300022467 Bacteria 1055
42 Ga0209784_100580 3300025224 Bacteria 12368
43 Ga0209566_100134 3300025225 Bacteria 91254
44 Ga0209566_100176 3300025225 Bacteria 69585
45 Ga0209147_100050 3300025229 Bacteria 274639
46 Ga0209147_103100 3300025229 Bacteria 3473
47 Ga0209437_101050 3300025233 Bacteria 9181
48 Ga0209130_1000408 3300025284 Bacteria 46794
49 Ga0209130_1001326 3300025284 Bacteria 16821
50 Ga0209025_1002734 3300025294 Bacteria 17867
51 Ga0209025_1003914 3300025294 Bacteria 13418
52 Ga0209025_1005315 3300025294 Bacteria 10572
53 Ga0209025_1008171 3300025294 Bacteria 7579
54 Ga0209025_1008208 3300025294 Bacteria 7553
55 Ga0209025_1011465 3300025294 Bacteria 5833
56 Ga0209025_1014346 3300025294 Bacteria 4882
57 Ga0209025_1014675 3300025294 Bacteria 4795
58 Ga0209025_1023188 3300025294 Bacteria 3255
59 Ga0209025_1065555 3300025294 Bacteria 1325
60 Ga0209256_1006478 3300025299 Bacteria 6165
61 Ga0207696_1001204 3300025711 Bacteria 14742
62 Ga0207696_1008988 3300025711 Bacteria 3757
63 Ga0207655_1002238 3300025728 Bacteria 16017
64 Ga0207655_1012213 3300025728 Bacteria 5041
65 Ga0207695_10058492 3300025913 Unclassified 4001
66 Ga0207671_10005028 3300025914 Bacteria 12364
67 Ga0207671_10005201 3300025914 Bacteria 12096
68 Ga0207693_10167702 3300025915 Bacteria 1729
69 Ga0207658_10109039 3300025986 Bacteria 2185
70 Ga0207677_10158382 3300026023 Bacteria 1756
71 Ga0268264_10019783 3300028381 Bacteria 5499
72 Ga0237817_10059 3300030083 Bacteria 37713
73 Ga0237817_10433 3300030083 Bacteria 6491
74 Ga0265327_10031733 3300031251 Bacteria 2965
75 Ga0316576_10098711 3300031727 Bacteria 2181
76 Ga0307416_100449826 3300032002 Bacteria 1340
77 Ga0307414_10094997 3300032004 Bacteria 2227
78 Ga0316593_10009398 3300032168 Bacteria 2759
79 Ga0373927_0044183 3300035695 Unclassified 2883
80 Ga0373925_0264694 3300037068 Bacteria 1382
81 Ga0237819_00186 3300038705 Bacteria 22891
82 Ga0237819_00431 3300038705 Bacteria 14376
83 Ga0400484_25395 3300038725 Bacteria 4543
84 Ga0400490_58447 3300038726 Bacteria 26999
85 Ga0400491_13044 3300038727 Unclassified 1664
86 Ga0400483_021029 3300039062 Bacteria 4729
87 Ga0400483_173834 3300039062 Bacteria 7941
88 Ga0439436_0004071 3300041404 Unclassified 4483
89 Ga0439439_0003269 3300041406 Unclassified 3563
90 Ga0439433_0005477 3300041999 Unclassified 2726
91 Ga0439449_0003429 3300042007 Bacteria 6170
92 Ga0439462_0002327 3300042015 Unclassified 4401
93 Ga0439462_0013874 3300042015 Bacteria 2068
94 Ga0466969_0005640 3300044656 Bacteria 6656
95 Ga0453684_0005210 3300044712 Bacteria 26092
96 Ga0453684_0008122 3300044712 Bacteria 18958
97 Ga0453684_0038028 3300044712 Bacteria 6590
98 Ga0453684_0060197 3300044712 Bacteria 4887
99 Ga0466968_0012301 3300044735 Bacteria 3347
100 Ga0466967_0008638 3300045976 Bacteria 7488
101 Ga0495637_0054284 3300046520 Bacteria 1665
102 Ga0496105_0144218 3300048908 Bacteria 1959
103 Ga0496109_0360797 3300048912 Bacteria 1373
104 Ga0496110_0012447 3300048913 Bacteria 6996
105 Ga0496111_0021296 3300048914 Bacteria 4524
106 Ga0496116_0001703 3300048919 Bacteria 24097
107 Ga0496116_0015808 3300048919 Bacteria 5944
108 Ga0496116_0044848 3300048919 Bacteria 2998
109 Ga0496118_0019457 3300048921 Bacteria 6068
110 Ga0496119_0087672 3300048922 Bacteria 1776
111 Ga0496121_0283042 3300048924 Bacteria 1133
112 Ga0496122_0010257 3300048925 Bacteria 9700
113 Ga0496122_0060400 3300048925 Bacteria 2792
114 Ga0496122_0067323 3300048925 Bacteria 2580
115 Ga0496122_0251025 3300048925 Bacteria 989
116 Ga0496123_0002354 3300048926 Bacteria 23709
117 Ga0496123_0134540 3300048926 Bacteria 1363
118 Ga0496124_0000211 3300048927 Bacteria 113824
119 Ga0496124_0065030 3300048927 Bacteria 3043
120 Ga0496125_0011772 3300048928 Bacteria 8718
121 Ga0496125_0028008 3300048928 Bacteria 5096
122 Ga0501044_0087358 3300049823 Bacteria 3150
123 nmdc:mga03683_43836_c1 3300050489 Bacteria 1336
124 nmdc:mga03n38_34_c1 3300050490 Bacteria 30506
125 nmdc:mga00v17_1447_c1 3300050491 Bacteria 12423
126 nmdc:mga00v17_632_c1 3300050491 Bacteria 19457
127 nmdc:mga0yw44_367_c1 3300050492 Bacteria 15740
128 nmdc:mga06z11_3438_c1 3300050494 Bacteria 6127
129 nmdc:mga06z11_5148_c1 3300050494 Bacteria 3461
130 nmdc:mga07m45_254_c1 3300050496 Bacteria 21821
131 nmdc:mga0n895_145761_c1 3300050512 Bacteria 2397
132 nmdc:mga0sz30_41660_c1 3300050516 Bacteria 1931
133 2511177716 2510917027 Bacteria 5287437
134 2512640204 2512564013 Bacteria 6286191
135 2512735869 2512564039 Bacteria 8739048
136 2524001511 2523533628 Bacteria 4098242
137 2524187152 2524023129 Bacteria 6762600
138 2553394911 2551306519 Bacteria 5465154
139 2563926009 2563366752 Bacteria 4961801
140 2571530160 2571042143 Bacteria 6986194
141 2573036688 2571042588 Bacteria 5045676
142 2578336644 2576861424 Bacteria 5270569
143 2580930100 2579778775 Bacteria 5360914
144 2587741206 2585428059 Bacteria 8696589
145 2595317510 2593339198 Bacteria 7267884
146 2601637682 2600255286 Bacteria 5390125
147 2621274872 2619619294 Bacteria 5575484
148 2643738204 2643221543 Bacteria 6628015
149 2644425132 2643221676 Bacteria 8119172
150 2644704271 2643221729 Bacteria 6621700
151 2644708965 2643221730 Bacteria 6523787
152 2672334635 2671180330 Bacteria 5521719
153 2673821974 2671180694 Bacteria 7506943
154 2685149697 2684622632 Bacteria 5380049
155 2698323477 2695420987 Bacteria 6152737
156 2705993704 2703719227 Bacteria 5631989
157 2721505071 2718218445 Bacteria 5113413
158 2728530053 2728368933 Bacteria 7044283
159 2739158538 2738541358 Bacteria 5932299
160 2739211021 2738543006 Bacteria 5904091
161 2793186407 2791355222 Bacteria 5898266
162 2802439471 2802428803 Bacteria 5806948
163 2808631680 2808606306 Bacteria 3608896
164 2816863490 2816332186 Bacteria 5331395
165 2819579156 2818991443 Bacteria 6598732
166 2819674955 2818991459 Bacteria 8736032
167 2821114497 2821111986 Bacteria 6894338
168 2842685607 2842682962 Bacteria 5589973
169 2849140391 2849139964 Bacteria 5613304
170 2857455651 2857453340 Bacteria 8090534
171 2857462486 2857460504 Bacteria 5194327
172 2857472621 2857465823 Bacteria 6772595
173 2857475488 2857472729 Bacteria 6568124
174 2857584850 2857581216 Bacteria 5522813
175 2857593514 2857591370 Bacteria 6569758
176 2857611980 2857609550 Bacteria 3753890
177 2864737778 2864733723 Bacteria 6770668
178 2865001342 2864997549 Bacteria 5139696
179 2865006261 2865002811 Bacteria 6333767
180 2881641165 2881636855 Bacteria 5205297
181 2885527453 2885526491 Bacteria 7164189
182 2888583622 2888578766 Bacteria 6743310
183 2889046641 2889042446 Bacteria 7618936
184 2889053907 2889049205 Bacteria 7524325
185 2889300446 2889295896 Bacteria 4704906
186 2904163402 2904162308 Bacteria 7086713
187 2904449468 2904445276 Bacteria 5310396
188 2904493459 2904490793 Bacteria 7046938
189 2904600164 2904595352 Bacteria 6124848
190 2904759290 2904755435 Bacteria 7986759
191 2907204555 2907202186 Bacteria 6632024
192 2915600298 2915597211 Bacteria 6475886
193 2915609867 2915606848 Bacteria 6032732
194 2919165351 2919160200 Bacteria 6929020
195 2919425432 2919425241 Bacteria 8055701
196 2925328237 2925326138 Bacteria 9652120
197 2925332678 2925326138 Bacteria 9652120
198 2929185483 2929183550 Bacteria 6377511
199 2929207860 2929206907 Bacteria 5918291
200 2929208265 2929206907 Bacteria 5918291
201 2929234973 2929233124 Bacteria 5948380
202 2931390089 2931384279 Bacteria 7299545
203 2938653135 2938649242 Bacteria 7118381
204 2938919144 2938917290 Bacteria 5914775
205 2939679915 2939679117 Bacteria 6921672
206 2945997689 2945991243 Bacteria 7008369
207 2946053910 2946053406 Bacteria 6978655
208 2947428515 2947426588 Bacteria 5357194
209 2956899539 2956897341 Bacteria 5447711
210 2965763010 2965761152 Bacteria 5806513
211 2968559398 2968558590 Bacteria 6956864
212 2971405660 2971403814 Bacteria 7370929
213 2971414454 2971410472 Bacteria 8311090
214 2971515694 2971511577 Bacteria 5404012
215 2979085438 2979083700 Bacteria 5894929
216 2980126225 2980125574 Bacteria 5567337
217 2980180180 2980176882 Bacteria 5397533
218 2980187321 2980182181 Bacteria 9454109
219 2981287640 2981284811 Bacteria 4641497
220 2981292834 2981289755 Bacteria 4641509
221 2981982952 2981980479 Bacteria 4641628
222 2981987862 2981985349 Bacteria 4641497
223 2984528191 2984527788 Bacteria 5288478
224 2984534299 2984532647 Bacteria 5288506
225 2988230742 2988225383 Bacteria 7221625
226 2996638929 2996632988 Bacteria 6921523
227 8002320154 8002317523 Bacteria 8051857
228 8022626053 8022621104 Bacteria 5241040
229 8022797161 8022792930 Bacteria 5693794
230 8023444347 8023438354 Bacteria 5779374
231 8023448235 8023444577 Bacteria 5661597
232 8046995950 8046991243 Bacteria 8497463
233 8054468040 8054465665 Bacteria 7323556
234 8054801324 8054795415 Bacteria 9785225
235 8055633078 8055632911 Bacteria 5283357
236 8056533577 8056533031 Bacteria 8964429
237 8057475790 8057473075 Bacteria 5892720
238 8057584475 8057582654 Bacteria 5218944
239 8057980802 8057977335 Bacteria 5694872
240 Ga0501070_0034542
241 JGI25159J45721_1004452
242 JGI25159J45721_1012421
243 JGI25151J46595_10001649
244 JGI25151J46595_10002664
245 JGI25151J46595_10012247
246 JGI25151J46595_10013169
247 Ga0055538_1000383
248 Ga0055532_1001477
249 Ga0055541_1001798
250 Ga0055541_1005037
251 Ga0070667_100036374
252 Ga0068860_100028618
253 Ga0075363_100000102
254 Ga0075362_10104912
255 Ga0075367_10027429
256 Ga0075369_10043668
257 Ga0075427_10007731
258 Ga0075370_10000183
259 Ga0075434_100108533
260 Ga0075429_100014772
261 Ga0105251_10014755
262 Ga0105244_10010563
263 Ga0105244_10018880
264 Ga0105244_10023767
265 Ga0105250_10006322
266 Ga0105250_10007684
267 Ga0105250_10029242
268 Ga0105240_10012724
269 Ga0105248_10318304
270 Ga0105237_10000104
271 Ga0105237_10000706
272 Ga0105239_10005210
273 Ga0105246_10025860
274 Ga0105246_10239038
275 Ga0157370_10194763
276 Ga0163162_10000057
277 Ga0163162_10066715
278 Ga0182008_10000135
279 Ga0157379_10319958
280 Ga0224712_10142718
281 Ga0209784_100580
282 Ga0209566_100134
283 Ga0209566_100176
284 Ga0209147_100050
285 Ga0209147_103100
286 Ga0209437_101050
287 Ga0209130_1000408
288 Ga0209130_1001326
289 Ga0209025_1002734
290 Ga0209025_1003914
291 Ga0209025_1005315
292 Ga0209025_1008171
293 Ga0209025_1008208
294 Ga0209025_1011465
295 Ga0209025_1014346
296 Ga0209025_1014675
297 Ga0209025_1023188
298 Ga0209025_1065555
299 Ga0209256_1006478
300 Ga0207696_1001204
301 Ga0207696_1008988
302 Ga0207655_1002238
303 Ga0207655_1012213
304 Ga0207695_10058492
305 Ga0207671_10005028
306 Ga0207671_10005201
307 Ga0207693_10167702
308 Ga0207658_10109039
309 Ga0207677_10158382
310 Ga0268264_10019783
311 Ga0237817_10059
312 Ga0237817_10433
313 Ga0265327_10031733
314 Ga0316576_10098711
315 Ga0307416_100449826
316 Ga0307414_10094997
317 Ga0316593_10009398
318 Ga0373927_0044183
319 Ga0373925_0264694
320 Ga0237819_00186
321 Ga0237819_00431
322 Ga0400484_25395
323 Ga0400490_58447
324 Ga0400491_13044
325 Ga0400483_021029
326 Ga0400483_173834
327 Ga0439436_0004071
328 Ga0439439_0003269
329 Ga0439433_0005477
330 Ga0439449_0003429
331 Ga0439462_0002327
332 Ga0439462_0013874
333 Ga0466969_0005640
334 Ga0453684_0005210
335 Ga0453684_0008122
336 Ga0453684_0038028
337 Ga0453684_0060197
338 Ga0466968_0012301
339 Ga0466967_0008638
340 Ga0495637_0054284
341 Ga0496105_0144218
342 Ga0496109_0360797
343 Ga0496110_0012447
344 Ga0496111_0021296
345 Ga0496116_0001703
346 Ga0496116_0015808
347 Ga0496116_0044848
348 Ga0496118_0019457
349 Ga0496119_0087672
350 Ga0496121_0283042
351 Ga0496122_0010257
352 Ga0496122_0060400
353 Ga0496122_0067323
354 Ga0496122_0251025
355 Ga0496123_0002354
356 Ga0496123_0134540
357 Ga0496124_0000211
358 Ga0496124_0065030
359 Ga0496125_0011772
360 Ga0496125_0028008
361 Ga0501044_0087358
362 nmdc:mga03683_43836_c1
363 nmdc:mga03n38_34_c1
364 nmdc:mga00v17_1447_c1
365 nmdc:mga00v17_632_c1
366 nmdc:mga0yw44_367_c1
367 nmdc:mga06z11_3438_c1
368 nmdc:mga06z11_5148_c1
369 nmdc:mga07m45_254_c1
370 nmdc:mga0n895_145761_c1
371 nmdc:mga0sz30_41660_c1
372 2511177716
373 2512640204
374 2512735869
375 2524001511
376 2524187152
377 2553394911
378 2563926009
379 2571530160
380 2573036688
381 2578336644
382 2580930100
383 2587741206
384 2595317510
385 2601637682
386 2621274872
387 2643738204
388 2644425132
389 2644704271
390 2644708965
391 2672334635
392 2673821974
393 2685149697
394 2698323477
395 2705993704
396 2721505071
397 2728530053
398 2739158538
399 2739211021
400 2793186407
401 2802439471
402 2808631680
403 2816863490
404 2819579156
405 2819674955
406 2821114497
407 2842685607
408 2849140391
409 2857455651
410 2857462486
411 2857472621
412 2857475488
413 2857584850
414 2857593514
415 2857611980
416 2864737778
417 2865001342
418 2865006261
419 2881641165
420 2885527453
421 2888583622
422 2889046641
423 2889053907
424 2889300446
425 2904163402
426 2904449468
427 2904493459
428 2904600164
429 2904759290
430 2907204555
431 2915600298
432 2915609867
433 2919165351
434 2919425432
435 2925328237
436 2925332678
437 2929185483
438 2929207860
439 2929208265
440 2929234973
441 2931390089
442 2938653135
443 2938919144
444 2939679915
445 2945997689
446 2946053910
447 2947428515
448 2956899539
449 2965763010
450 2968559398
451 2971405660
452 2971414454
453 2971515694
454 2979085438
455 2980126225
456 2980180180
457 2980187321
458 2981287640
459 2981292834
460 2981982952
461 2981987862
462 2984528191
463 2984534299
464 2988230742
465 2996638929
466 8002320154
467 8022626053
468 8022797161
469 8023444347
470 8023448235
471 8046995950
472 8054468040
473 8054801324
474 8055633078
475 8056533577
476 8057475790
477 8057584475
478 8057980802

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

17

312

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2eco-assembly1.cif.gz_A crystal structure of t.th. hb8 o-acetylserine sulfhydrylase complexed with 4-methylvalerate 0.9745 7 305
3x44-assembly1.cif.gz_A crystal structure of o-ureido-l-serine-bound k43a mutant of o-ureido-l-serine synthase 0.974 2 304
1z7y-assembly1.cif.gz_A crystal structure of the arabidopsis thaliana o-acetylserine sulfhydrylase k46a mutant 0.9732 1 305
4aec-assembly1.cif.gz_B crystal structure of the arabidopsis thaliana o-acetyl-serine-(thiol)- lyase c 0.9727 1 304
3vbe-assembly2.cif.gz_C crystal structure of beta-cyanoalanine synthase in soybean 0.9722 1 304
ID Description Score Start End Superfamily
3x44B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9896 38 135 3.40.50.1100
3vc3B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9871 39 142 3.40.50.1100
af_K7L749_143_229_3.40.50.1100 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9853 147 233 3.40.50.1100
1j6nA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9828 159 301 3.40.50.1100
5b1iC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9797 45 146 3.40.50.1100
ID Description Score Start End GO Terms
AF-A0A1B2CT90-F1-model_v4 Cystathionine-beta-synthase a 0.9992 45 116 GO:0019344
AF-A0A6P5GGY9-F1-model_v4 Bifunctional L-3-cyanoalanine synthase/cysteine synthase 2, mitochondrial-like isoform X2 0.9909 91 199
AF-A0A5K1GAW8-F1-model_v4 Tryptophan synthase beta chain-like PALP domain-containing protein 0.9864 66 150
AF-A0A2T7CUW7-F1-model_v4 Tryptophan synthase beta chain-like PALP domain-containing protein 0.9858 1 264 GO:0006535
AF-A0A359MTH3-F1-model_v4 Cysteine synthase A 0.9851 139 269 GO:1901605

Map