F352094

General Info

Members Datasets Scaffolds Average Seq Length
239 194 478 403

Family's Representative Sequence

Representative Sequence 3300033545|Ga0316214_1002291|Ga0316214_10022912
Length 455
Sequence VRADGAKEHCHSLERAAGFHAPEPDVTPVAFTGNSDEYAIGGVRMSLPLSGVTILDLSRVLAGPYATMVLGDLGADVIKVERLPGGDDSRTMGPFLDGESYCFAQVNRNKRGVALDLKNPAGRKALLAIAAHSDIVVENFRPGTTRRLGCDYDAVRAVSPDVIYCSISGFGQTGPYAERPAYDIIAQGIGGFLSMTGQPGGPPAKAGIALNDVAGGVTAVQAILAAYIARLRGAGGQYIDTSLVESGVAWTVWEAAAYFGSGEVAAPTGTRHRRSAPYQAYRTKDGYVTVGANTERMWQALCADVLNRPDWVSRPEYASAQARLAHVDDLERDIESVLASDTTEHWVAAMLAAGVPAGPVNTYDQVIADPHLVARGATTTVEHSAMGTLRALSSPLRLSKTPPEIRRGAPVFGEHTAEVLRSFGYTAGEITALQEAGALYDPALPPPGASTNADA

Samples

Sample ID Description Type Environment
1 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
104 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
105 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
106 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
107 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
108 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
109 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
110 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
116 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
117 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
118 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
119 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
120 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
121 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
122 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
123 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
129 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
130 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
131 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
132 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
133 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
134 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
135 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
136 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
139 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
140 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
141 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
144 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
145 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
146 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
147 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
148 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
149 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
150 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
151 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
152 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
153 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
154 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
155 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
156 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
157 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
158 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
169 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
170 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
171 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
172 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
173 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
176 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
177 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
178 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
179 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
180 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
181 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
182 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
183 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
184 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
185 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
186 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
187 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
188 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
189 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
190 2643221621 Achromobacter sp. Root83 Isolate Unclassified
191 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
192 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
193 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
194 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.23
Metatranscriptomes 1.67
Isolates 2.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.79
Nodule 0
Rhizoplane 0.42
Rhizosphere 87.45
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316214_1002291 3300033545 Bacteria 2349
2 JGI25407J50210_10004354 3300003373 Bacteria 3440
3 Ga0055540_1002549 3300003792 Bacteria 9494
4 Ga0055531_10000254 3300003794 Bacteria 57349
5 Ga0070658_10036786 3300005327 Bacteria 3946
6 Ga0070676_10044399 3300005328 Bacteria 2586
7 Ga0070683_100005154 3300005329 Bacteria 10869
8 Ga0070683_100100966 3300005329 Bacteria 2716
9 Ga0070683_100126674 3300005329 Bacteria 2414
10 Ga0070680_100150109 3300005336 Bacteria 1956
11 Ga0068868_100057958 3300005338 Bacteria 3061
12 Ga0070660_100038176 3300005339 Bacteria 3644
13 Ga0070660_100108992 3300005339 Bacteria 2201
14 Ga0070689_100023728 3300005340 Bacteria 4596
15 Ga0070668_100214588 3300005347 Bacteria 1584
16 Ga0070671_100053411 3300005355 Bacteria 3359
17 Ga0070674_100044985 3300005356 Bacteria 3014
18 Ga0070674_100128061 3300005356 Bacteria 1889
19 Ga0070673_100026565 3300005364 Bacteria 4278
20 Ga0070659_100019281 3300005366 Bacteria 5165
21 Ga0070713_100149482 3300005436 Bacteria 2076
22 Ga0070663_100064694 3300005455 Bacteria 2644
23 Ga0070678_100031525 3300005456 Bacteria 3658
24 Ga0070681_10006859 3300005458 Bacteria 11082
25 Ga0070706_100117496 3300005467 Bacteria 2477
26 Ga0070707_100012963 3300005468 Bacteria 7791
27 Ga0070707_100029285 3300005468 Bacteria 5243
28 Ga0070698_100017081 3300005471 Bacteria 7649
29 Ga0070679_100005384 3300005530 Bacteria 11853
30 Ga0070684_100006125 3300005535 Bacteria 9269
31 Ga0070684_100045954 3300005535 Bacteria 3783
32 Ga0070693_100009342 3300005547 Bacteria 4874
33 Ga0068855_100077605 3300005563 Bacteria 3854
34 Ga0068855_100243445 3300005563 Bacteria 2009
35 Ga0070664_100025520 3300005564 Bacteria 4899
36 Ga0070664_100139304 3300005564 Bacteria 2135
37 Ga0068856_100035912 3300005614 Bacteria 4859
38 Ga0068856_100045512 3300005614 Bacteria 4321
39 Ga0070702_100053961 3300005615 Bacteria 2310
40 Ga0068852_100029990 3300005616 Bacteria 4473
41 Ga0068852_100196543 3300005616 Bacteria 1906
42 Ga0068852_100290319 3300005616 Bacteria 1580
43 Ga0068864_100104522 3300005618 Bacteria 2516
44 Ga0068851_10012225 3300005834 Bacteria 4042
45 Ga0081538_10001819 3300005981 Bacteria 21462
46 Ga0081538_10003061 3300005981 Bacteria 15926
47 Ga0070717_10076743 3300006028 Bacteria 2797
48 Ga0075365_10002643 3300006038 Bacteria 8889
49 Ga0075363_100002270 3300006048 Bacteria 7791
50 Ga0075363_100003493 3300006048 Bacteria 6693
51 Ga0075364_10030854 3300006051 Bacteria 3442
52 Ga0075364_10137117 3300006051 Bacteria 1645
53 Ga0075362_10103469 3300006177 Bacteria 1334
54 Ga0075367_10001456 3300006178 Bacteria 10197
55 Ga0068871_100024696 3300006358 Bacteria 4664
56 Ga0068871_100125719 3300006358 Bacteria 2170
57 Ga0075430_100026738 3300006846 Bacteria 4907
58 Ga0075431_100000810 3300006847 Bacteria 27353
59 Ga0075431_100018272 3300006847 Bacteria 7134
60 Ga0075431_100209979 3300006847 Bacteria 1989
61 Ga0075429_100024243 3300006880 Bacteria 5263
62 Ga0075429_100184527 3300006880 Bacteria 1828
63 Ga0105240_10059169 3300009093 Bacteria 4783
64 Ga0105240_10102056 3300009093 Bacteria 3487
65 Ga0105240_10289428 3300009093 Bacteria 1879
66 Ga0111539_10006831 3300009094 Bacteria 14668
67 Ga0111539_10039838 3300009094 Bacteria 5659
68 Ga0105245_10248243 3300009098 Bacteria 1728
69 Ga0114129_10005915 3300009147 Bacteria 17311
70 Ga0105241_10121827 3300009174 Bacteria 2101
71 Ga0105248_10275625 3300009177 Bacteria 1894
72 Ga0105238_10041126 3300009551 Bacteria 4682
73 Ga0105239_10226017 3300010375 Bacteria 2100
74 Ga0105246_10186051 3300011119 Bacteria 1603
75 Ga0157369_10042581 3300013105 Bacteria 4952
76 Ga0157374_10080952 3300013296 Bacteria 3081
77 Ga0157372_10029653 3300013307 Bacteria 5976
78 Ga0157376_10004872 3300014969 Bacteria 9358
79 Ga0206356_10709650 3300020070 Bacteria 1618
80 Ga0206354_10997892 3300020081 Bacteria 2468
81 Ga0206353_10543111 3300020082 Bacteria 2655
82 Ga0209673_1019157 3300025273 Bacteria 2466
83 Ga0209051_1000055 3300025303 Bacteria 277194
84 Ga0209257_1000101 3300025304 Bacteria 251553
85 Ga0207682_10004303 3300025893 Bacteria 5984
86 Ga0207642_10011706 3300025899 Bacteria 3140
87 Ga0207688_10074270 3300025901 Bacteria 1933
88 Ga0207645_10012480 3300025907 Bacteria 5762
89 Ga0207645_10145020 3300025907 Bacteria 1548
90 Ga0207705_10174122 3300025909 Bacteria 1621
91 Ga0207684_10101207 3300025910 Bacteria 2463
92 Ga0207654_10126052 3300025911 Bacteria 1614
93 Ga0207707_10007352 3300025912 Bacteria 9594
94 Ga0207707_10073119 3300025912 Bacteria 2989
95 Ga0207707_10213117 3300025912 Bacteria 1682
96 Ga0207695_10185990 3300025913 Bacteria 1996
97 Ga0207671_10054791 3300025914 Bacteria 2954
98 Ga0207660_10074966 3300025917 Bacteria 2470
99 Ga0207662_10004833 3300025918 Bacteria 7125
100 Ga0207657_10049194 3300025919 Bacteria 3676
101 Ga0207657_10054821 3300025919 Bacteria 3445
102 Ga0207652_10192410 3300025921 Bacteria 1835
103 Ga0207652_10330572 3300025921 Bacteria 1376
104 Ga0207646_10039820 3300025922 Bacteria 4229
105 Ga0207646_10059476 3300025922 Bacteria 3413
106 Ga0207681_10107743 3300025923 Bacteria 2021
107 Ga0207659_10075030 3300025926 Bacteria 2480
108 Ga0207700_10107643 3300025928 Bacteria 2237
109 Ga0207644_10042535 3300025931 Bacteria 3220
110 Ga0207644_10050021 3300025931 Bacteria 2994
111 Ga0207706_10026800 3300025933 Bacteria 5158
112 Ga0207669_10036955 3300025937 Bacteria 2797
113 Ga0207691_10000624 3300025940 Bacteria 35075
114 Ga0207691_10091865 3300025940 Bacteria 2719
115 Ga0207689_10021731 3300025942 Bacteria 5397
116 Ga0207661_10086918 3300025944 Bacteria 2595
117 Ga0207679_10015901 3300025945 Bacteria 4987
118 Ga0207679_10236085 3300025945 Bacteria 1546
119 Ga0207677_10002449 3300026023 Bacteria 9747
120 Ga0207677_10087704 3300026023 Bacteria 2253
121 Ga0207639_10037186 3300026041 Bacteria 3614
122 Ga0207708_10007218 3300026075 Bacteria 8215
123 Ga0207702_10019654 3300026078 Bacteria 5592
124 Ga0207648_10033922 3300026089 Bacteria 4501
125 Ga0207676_10043328 3300026095 Bacteria 3464
126 Ga0207674_10024335 3300026116 Bacteria 6473
127 Ga0207698_10055501 3300026142 Bacteria 3054
128 Ga0209969_1007058 3300027360 Bacteria 1584
129 Ga0209999_1002876 3300027543 Bacteria 3053
130 Ga0209983_1008617 3300027665 Bacteria 2084
131 Ga0209974_10006906 3300027876 Bacteria 3934
132 Ga0207428_10002888 3300027907 Bacteria 17027
133 Ga0268265_10052556 3300028380 Bacteria 3082
134 Ga0265318_10008383 3300028577 Bacteria 4603
135 Ga0265332_10012934 3300031238 Bacteria 3700
136 Ga0265320_10074779 3300031240 Bacteria 1590
137 Ga0265331_10001100 3300031250 Bacteria 20824
138 Ga0265316_10064454 3300031344 Bacteria 2838
139 Ga0265314_10014174 3300031711 Bacteria 6394
140 Ga0265342_10013780 3300031712 Bacteria 5400
141 Ga0307410_10007080 3300031852 Bacteria 6113
142 Ga0307406_10032532 3300031901 Bacteria 3185
143 Ga0307409_100012177 3300031995 Bacteria 5468
144 Ga0307416_100027458 3300032002 Bacteria 4216
145 Ga0307414_10033388 3300032004 Bacteria 3401
146 Ga0307411_10178377 3300032005 Bacteria 1610
147 Ga0373953_0019602 3300035117 Bacteria 2518
148 Ga0373954_0016971 3300035118 Bacteria 3265
149 Ga0373956_0040345 3300035119 Bacteria 2070
150 Ga0373955_0026759 3300035172 Bacteria 2975
151 Ga0373933_0019706 3300035724 Bacteria 3815
152 Ga0373947_0029976 3300035725 Bacteria 3194
153 Ga0372808_000128 3300036459 Bacteria 4116
154 Ga0373925_0017381 3300037068 Bacteria 5213
155 Ga0395899_0027212 3300037312 Bacteria 4312
156 Ga0395899_0037222 3300037312 Bacteria 3648
157 Ga0395900_0029630 3300037418 Bacteria 5615
158 Ga0395900_0504668 3300037418 Bacteria 1159
159 Ga0395901_0025079 3300038443 Bacteria 6121
160 Ga0395901_0084016 3300038443 Bacteria 3328
161 Ga0395901_0184703 3300038443 Bacteria 2187
162 Ga0395901_0266862 3300038443 Bacteria 1781
163 Ga0436365_1578347 3300039437 Bacteria 2932
164 Ga0439461_0000740 3300041410 Bacteria 4746
165 Ga0439466_0003850 3300041411 Bacteria 5789
166 Ga0439431_0000981 3300041997 Bacteria 6198
167 Ga0439445_0001367 3300042004 Bacteria 5287
168 Ga0439434_0022205 3300042435 Bacteria 1907
169 Ga0451577_0075058 3300042876 Bacteria 3015
170 Ga0453683_0005532 3300044673 Bacteria 8806
171 Ga0466960_0016031 3300044901 Bacteria 3242
172 Ga0451576_0014275 3300045051 Bacteria 8847
173 Ga0451576_0182214 3300045051 Bacteria 2193
174 Ga0466967_0027511 3300045976 Bacteria 4732
175 Ga0466967_0303704 3300045976 Bacteria 1536
176 Ga0495592_0041370 3300046454 Bacteria 3454
177 Ga0495653_0038938 3300046463 Bacteria 3728
178 Ga0495608_0057307 3300046511 Bacteria 2571
179 Ga0495618_0019474 3300046514 Bacteria 4176
180 Ga0495628_0081079 3300046516 Bacteria 2520
181 Ga0495643_0006604 3300046522 Bacteria 7620
182 Ga0495642_0042596 3300046528 Bacteria 1850
183 Ga0495652_0055357 3300046529 Bacteria 3373
184 Ga0495654_0000946 3300046530 Bacteria 21499
185 Ga0495645_0090628 3300046543 Bacteria 2185
186 Ga0495645_0101871 3300046543 Bacteria 2041
187 Ga0495667_0034718 3300046559 Bacteria 3371
188 Ga0495635_0046093 3300046663 Bacteria 3007
189 Ga0495661_0007336 3300046665 Bacteria 7685
190 Ga0495599_0043112 3300046678 Bacteria 2832
191 Ga0495646_0032187 3300046680 Bacteria 3264
192 Ga0495600_0022683 3300046809 Bacteria 4033
193 Ga0495604_0102707 3300047317 Bacteria 2098
194 Ga0495680_0028657 3300047322 Bacteria 4564
195 Ga0495684_0151338 3300047471 Bacteria 1734
196 Ga0496110_0166071 3300048913 Bacteria 2002
197 Ga0501031_0068837 3300049568 Bacteria 2306
198 Ga0501034_0181691 3300049571 Bacteria 2068
199 Ga0501039_0005613 3300049575 Bacteria 9497
200 Ga0501040_0013209 3300049576 Bacteria 5431
201 Ga0501041_0013321 3300049577 Bacteria 4873
202 Ga0501046_0088863 3300049580 Bacteria 2379
203 Ga0501047_0038079 3300049581 Bacteria 4652
204 Ga0501047_0258169 3300049581 Bacteria 1590
205 Ga0501069_0005338 3300049585 Bacteria 6682
206 Ga0501070_0062056 3300049586 Bacteria 3096
207 Ga0501072_0084912 3300049588 Bacteria 2511
208 Ga0501074_0000836 3300049590 Bacteria 19569
209 Ga0501075_0000850 3300049591 Bacteria 19233
210 Ga0501076_0066869 3300049592 Bacteria 2869
211 Ga0501080_0004907 3300049742 Bacteria 11918
212 Ga0501081_0000396 3300049743 Bacteria 24049
213 Ga0501035_0074920 3300049822 Bacteria 2993
214 Ga0501044_0000022 3300049823 Bacteria 201689
215 Ga0501045_0023162 3300049824 Bacteria 4450
216 Ga0501045_0143012 3300049824 Bacteria 1779
217 nmdc:mga03683_33687_c1 3300050489 Bacteria 2069
218 nmdc:mga03n38_3367_c1 3300050490 Bacteria 5122
219 nmdc:mga03n38_9111_c1 3300050490 Bacteria 3593
220 nmdc:mga00v17_3526_c1 3300050491 Bacteria 8083
221 nmdc:mga00v17_45702_c1 3300050491 Bacteria 2646
222 nmdc:mga0yw44_3069_c1 3300050492 Bacteria 7317
223 nmdc:mga0k408_82638_c1 3300050493 Bacteria 1882
224 nmdc:mga07m45_43509_c1 3300050496 Bacteria 2518
225 nmdc:mga09592_176818_c1 3300050508 Bacteria 1846
226 nmdc:mga09592_21222_c1 3300050508 Bacteria 5352
227 nmdc:mga0qj67_10963_c1 3300050509 Bacteria 6784
228 nmdc:mga06r32_199199_c1 3300050510 Bacteria 1990
229 nmdc:mga06r32_4697_c1 3300050510 Bacteria 12270
230 nmdc:mga08y16_1682_c1 3300050511 Bacteria 22429
231 nmdc:mga0sz30_75296_c1 3300050516 Bacteria 1456
232 Ga0495655_0002961 3300053083 Bacteria 2752
233 Ga0495619_0139773 3300053085 Bacteria 1667
234 Ga0501082_0004834 3300060353 Bacteria 11749
235 2644123915 2643221621 Bacteria 6212786
236 2816504048 2816332139 Bacteria 9138787
237 2857594270 2857591370 Bacteria 6569758
238 2902812771 2902810491 Bacteria 6794147
239 2929215647 2929212328 Bacteria 7708288
240 Ga0316214_1002291
241 JGI25407J50210_10004354
242 Ga0055540_1002549
243 Ga0055531_10000254
244 Ga0070658_10036786
245 Ga0070676_10044399
246 Ga0070683_100005154
247 Ga0070683_100100966
248 Ga0070683_100126674
249 Ga0070680_100150109
250 Ga0068868_100057958
251 Ga0070660_100038176
252 Ga0070660_100108992
253 Ga0070689_100023728
254 Ga0070668_100214588
255 Ga0070671_100053411
256 Ga0070674_100044985
257 Ga0070674_100128061
258 Ga0070673_100026565
259 Ga0070659_100019281
260 Ga0070713_100149482
261 Ga0070663_100064694
262 Ga0070678_100031525
263 Ga0070681_10006859
264 Ga0070706_100117496
265 Ga0070707_100012963
266 Ga0070707_100029285
267 Ga0070698_100017081
268 Ga0070679_100005384
269 Ga0070684_100006125
270 Ga0070684_100045954
271 Ga0070693_100009342
272 Ga0068855_100077605
273 Ga0068855_100243445
274 Ga0070664_100025520
275 Ga0070664_100139304
276 Ga0068856_100035912
277 Ga0068856_100045512
278 Ga0070702_100053961
279 Ga0068852_100029990
280 Ga0068852_100196543
281 Ga0068852_100290319
282 Ga0068864_100104522
283 Ga0068851_10012225
284 Ga0081538_10001819
285 Ga0081538_10003061
286 Ga0070717_10076743
287 Ga0075365_10002643
288 Ga0075363_100002270
289 Ga0075363_100003493
290 Ga0075364_10030854
291 Ga0075364_10137117
292 Ga0075362_10103469
293 Ga0075367_10001456
294 Ga0068871_100024696
295 Ga0068871_100125719
296 Ga0075430_100026738
297 Ga0075431_100000810
298 Ga0075431_100018272
299 Ga0075431_100209979
300 Ga0075429_100024243
301 Ga0075429_100184527
302 Ga0105240_10059169
303 Ga0105240_10102056
304 Ga0105240_10289428
305 Ga0111539_10006831
306 Ga0111539_10039838
307 Ga0105245_10248243
308 Ga0114129_10005915
309 Ga0105241_10121827
310 Ga0105248_10275625
311 Ga0105238_10041126
312 Ga0105239_10226017
313 Ga0105246_10186051
314 Ga0157369_10042581
315 Ga0157374_10080952
316 Ga0157372_10029653
317 Ga0157376_10004872
318 Ga0206356_10709650
319 Ga0206354_10997892
320 Ga0206353_10543111
321 Ga0209673_1019157
322 Ga0209051_1000055
323 Ga0209257_1000101
324 Ga0207682_10004303
325 Ga0207642_10011706
326 Ga0207688_10074270
327 Ga0207645_10012480
328 Ga0207645_10145020
329 Ga0207705_10174122
330 Ga0207684_10101207
331 Ga0207654_10126052
332 Ga0207707_10007352
333 Ga0207707_10073119
334 Ga0207707_10213117
335 Ga0207695_10185990
336 Ga0207671_10054791
337 Ga0207660_10074966
338 Ga0207662_10004833
339 Ga0207657_10049194
340 Ga0207657_10054821
341 Ga0207652_10192410
342 Ga0207652_10330572
343 Ga0207646_10039820
344 Ga0207646_10059476
345 Ga0207681_10107743
346 Ga0207659_10075030
347 Ga0207700_10107643
348 Ga0207644_10042535
349 Ga0207644_10050021
350 Ga0207706_10026800
351 Ga0207669_10036955
352 Ga0207691_10000624
353 Ga0207691_10091865
354 Ga0207689_10021731
355 Ga0207661_10086918
356 Ga0207679_10015901
357 Ga0207679_10236085
358 Ga0207677_10002449
359 Ga0207677_10087704
360 Ga0207639_10037186
361 Ga0207708_10007218
362 Ga0207702_10019654
363 Ga0207648_10033922
364 Ga0207676_10043328
365 Ga0207674_10024335
366 Ga0207698_10055501
367 Ga0209969_1007058
368 Ga0209999_1002876
369 Ga0209983_1008617
370 Ga0209974_10006906
371 Ga0207428_10002888
372 Ga0268265_10052556
373 Ga0265318_10008383
374 Ga0265332_10012934
375 Ga0265320_10074779
376 Ga0265331_10001100
377 Ga0265316_10064454
378 Ga0265314_10014174
379 Ga0265342_10013780
380 Ga0307410_10007080
381 Ga0307406_10032532
382 Ga0307409_100012177
383 Ga0307416_100027458
384 Ga0307414_10033388
385 Ga0307411_10178377
386 Ga0373953_0019602
387 Ga0373954_0016971
388 Ga0373956_0040345
389 Ga0373955_0026759
390 Ga0373933_0019706
391 Ga0373947_0029976
392 Ga0372808_000128
393 Ga0373925_0017381
394 Ga0395899_0027212
395 Ga0395899_0037222
396 Ga0395900_0029630
397 Ga0395900_0504668
398 Ga0395901_0025079
399 Ga0395901_0084016
400 Ga0395901_0184703
401 Ga0395901_0266862
402 Ga0436365_1578347
403 Ga0439461_0000740
404 Ga0439466_0003850
405 Ga0439431_0000981
406 Ga0439445_0001367
407 Ga0439434_0022205
408 Ga0451577_0075058
409 Ga0453683_0005532
410 Ga0466960_0016031
411 Ga0451576_0014275
412 Ga0451576_0182214
413 Ga0466967_0027511
414 Ga0466967_0303704
415 Ga0495592_0041370
416 Ga0495653_0038938
417 Ga0495608_0057307
418 Ga0495618_0019474
419 Ga0495628_0081079
420 Ga0495643_0006604
421 Ga0495642_0042596
422 Ga0495652_0055357
423 Ga0495654_0000946
424 Ga0495645_0090628
425 Ga0495645_0101871
426 Ga0495667_0034718
427 Ga0495635_0046093
428 Ga0495661_0007336
429 Ga0495599_0043112
430 Ga0495646_0032187
431 Ga0495600_0022683
432 Ga0495604_0102707
433 Ga0495680_0028657
434 Ga0495684_0151338
435 Ga0496110_0166071
436 Ga0501031_0068837
437 Ga0501034_0181691
438 Ga0501039_0005613
439 Ga0501040_0013209
440 Ga0501041_0013321
441 Ga0501046_0088863
442 Ga0501047_0038079
443 Ga0501047_0258169
444 Ga0501069_0005338
445 Ga0501070_0062056
446 Ga0501072_0084912
447 Ga0501074_0000836
448 Ga0501075_0000850
449 Ga0501076_0066869
450 Ga0501080_0004907
451 Ga0501081_0000396
452 Ga0501035_0074920
453 Ga0501044_0000022
454 Ga0501045_0023162
455 Ga0501045_0143012
456 nmdc:mga03683_33687_c1
457 nmdc:mga03n38_3367_c1
458 nmdc:mga03n38_9111_c1
459 nmdc:mga00v17_3526_c1
460 nmdc:mga00v17_45702_c1
461 nmdc:mga0yw44_3069_c1
462 nmdc:mga0k408_82638_c1
463 nmdc:mga07m45_43509_c1
464 nmdc:mga09592_176818_c1
465 nmdc:mga09592_21222_c1
466 nmdc:mga0qj67_10963_c1
467 nmdc:mga06r32_199199_c1
468 nmdc:mga06r32_4697_c1
469 nmdc:mga08y16_1682_c1
470 nmdc:mga0sz30_75296_c1
471 Ga0495655_0002961
472 Ga0495619_0139773
473 Ga0501082_0004834
474 2644123915
475 2816504048
476 2857594270
477 2902812771
478 2929215647

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

49

416

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hl6-assembly2.cif.gz_C yfde from escherichia coli 0.9521 1 380
5yx6-assembly2.cif.gz_D crystal structure of rv3272 from m. tuberculosis orthorhombic form 0.9511 1 372
4hl6-assembly2.cif.gz_C yfde from escherichia coli 0.9497 1 380
5yit-assembly1.cif.gz_A crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.949 1 372
5yit-assembly3.cif.gz_E-2 crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.946 3 372
ID Description Score Start End Superfamily
af_Q4V9F2_1_227_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9638 24 233 3.40.50.10540
af_Q68FU4_261_348_3.30.1540.10 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9518 230 313 3.30.1540.10
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9514 226 316 3.30.1540.10
4ed9A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9397 3 378 3.40.50.10540
af_Q9VDL4_46_327_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9387 1 281 3.40.50.10540
ID Description Score Start End GO Terms
AF-A0A7Y7YJD4-F1-model_v4 CoA transferase 0.9845 18 140 GO:0016740
AF-A0A2N2T8D3-F1-model_v4 Formyl-CoA transferase 0.9845 2 98 GO:0008410
AF-F3GKP8-F1-model_v4 L-carnitine dehydratase/bile acid-inducible protein F 0.983 2 147 GO:0003824
AF-A0A3M3RLL0-F1-model_v4 deleted 0.9824 2 152
AF-A0A536Y7Y7-F1-model_v4 Uncharacterized protein 0.9793 33 121 GO:0008410

Map