F351886

General Info

Members Datasets Scaffolds Average Seq Length
239 155 478 657

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10002957|Ga0114129_1000295712
Length 776
Sequence LDNQLLSVDEKAQRPITKIETAQKGGIVLRDFIFVVFVFFVVSVPSPWRVSLEVVGGWTAVAAFKPSQEPLVARVEIDAARIEGSISPLLYGQFLEYMFEGVKRGLHAELIRNRSFEEPPNAIGLSRYWERYPDDRNDDYSMSFSWDDTTAYPNAPQSEGLIGGHSLRIQLRSGVVVRHGVYQARVPIERDLEYFGYVWMKTDAFKGDVRVALEADGTDGRLYDEARITEVTGDWKRYVFTLRPSTTDPLARFSILFAGSGTLWLDQISLLPGSAMDGVRADVFAKVKALEPAFIRWPGGNVAQDYHWRWGIGPRDERPTWINLSWKNEPEPSDFGTDEFIRFARSIGAEPSITVNVEGRGATVDEAASWVEYCNGAATTTSGTMRARNGHAEPYGVKYWEIGNEIWGDWVRGHSDAETYAHNFMRYAAAMRTIDPSIQLIAVGDNNMTWNRTVLQLAGEHIDYLAVHHYYGRREMNGDLRNLMARPLHYERWYDDVASELSGAPRARPAPHPAGAERGMGVASTPARRIRALGAPDPRATASPESPPHASRAVGWDWGVRRGEAPRSKLELPADRRPRLAINEWGLDLPEPQQYSIVSALYTGRLMNVFERRSDLIAMSAVSDLVNGWPGGIIQASDRGVFVTPIFLVNKLYATHLGADRLATTVDGPTFSTSREGNDVPVLDAVASRAADGRIFLKIVNTDLERRIRARVHVRGAEVSPRAMVERVVANSLTAANGFATPDAVRITSSSINARNTFDLELPEHSVSVVTLTTVR

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
82 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
122 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
123 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
124 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
125 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
126 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
127 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
128 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
133 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
136 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
139 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
145 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
146 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
147 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
148 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
155 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.84
Nodule 0
Rhizoplane 4.6
Rhizosphere 93.72
Stem 0
Stem Tuber 0
Unclassified 11.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10002957 3300009147 Bacteria 23771
2 JGI24751J29686_10000025 3300002459 Bacteria 96903
3 JGI25406J46586_10005646 3300003203 Bacteria 5787
4 JGI25406J46586_10026936 3300003203 Unclassified 2210
5 Ga0065714_10064430 3300005288 Bacteria 140636
6 Ga0065712_10000130 3300005290 Bacteria 72641
7 Ga0065712_10001597 3300005290 Bacteria 9118
8 Ga0065712_10004325 3300005290 Bacteria 6306
9 Ga0065712_10004460 3300005290 Bacteria 5382
10 Ga0065712_10069443 3300005290 Bacteria 7267
11 Ga0065715_10000306 3300005293 Bacteria 17592
12 Ga0065715_10092179 3300005293 Bacteria 5277
13 Ga0065715_10103384 3300005293 Bacteria 3009
14 Ga0065707_10007197 3300005295 Unclassified 2398
15 Ga0065707_10083928 3300005295 Bacteria 7932
16 Ga0070683_100001279 3300005329 Bacteria 19128
17 Ga0070670_100000300 3300005331 Bacteria 42862
18 Ga0070670_100011381 3300005331 Bacteria 7607
19 Ga0070666_10009612 3300005335 Bacteria 6035
20 Ga0070680_100007659 3300005336 Bacteria 8239
21 Ga0070682_100017774 3300005337 Bacteria 4148
22 Ga0070660_100080418 3300005339 Bacteria 2557
23 Ga0070692_10006414 3300005345 Bacteria 5108
24 Ga0070671_100001619 3300005355 Bacteria 16966
25 Ga0070688_100029091 3300005365 Bacteria 3305
26 Ga0070659_100000547 3300005366 Bacteria 27443
27 Ga0070703_10002766 3300005406 Bacteria 5030
28 Ga0070709_10013712 3300005434 Unclassified 4564
29 Ga0070714_100033599 3300005435 Unclassified 4289
30 Ga0070713_100001235 3300005436 Bacteria 16346
31 Ga0070713_100011414 3300005436 Bacteria 6470
32 Ga0070713_100104671 3300005436 Bacteria 2457
33 Ga0070711_100000908 3300005439 Bacteria 15590
34 Ga0070700_100000061 3300005441 Bacteria 80618
35 Ga0070694_100001310 3300005444 Bacteria 14477
36 Ga0070694_100016283 3300005444 Bacteria 4680
37 Ga0070694_100022316 3300005444 Unclassified 4055
38 Ga0070694_100067440 3300005444 Bacteria 2456
39 Ga0070694_100068565 3300005444 Bacteria 2438
40 Ga0070708_100002350 3300005445 Bacteria 14643
41 Ga0070681_10000328 3300005458 Bacteria 38769
42 Ga0070681_10000469 3300005458 Bacteria 32902
43 Ga0070681_10024814 3300005458 Bacteria 6031
44 Ga0068867_100014405 3300005459 Bacteria 5603
45 Ga0068867_100035681 3300005459 Bacteria 3608
46 Ga0070706_100008765 3300005467 Bacteria 9424
47 Ga0070706_100120409 3300005467 Bacteria 2446
48 Ga0070698_100000576 3300005471 Bacteria 39393
49 Ga0070699_100000642 3300005518 Bacteria 32720
50 Ga0070699_100001355 3300005518 Bacteria 22589
51 Ga0070699_100006349 3300005518 Bacteria 10307
52 Ga0070699_100076506 3300005518 Bacteria 2913
53 Ga0070679_100000491 3300005530 Bacteria 33649
54 Ga0070684_100000968 3300005535 Bacteria 20476
55 Ga0070697_100017063 3300005536 Bacteria 5711
56 Ga0070697_100024694 3300005536 Bacteria 4787
57 Ga0068853_100016911 3300005539 Bacteria 6011
58 Ga0070672_100027447 3300005543 Bacteria 4246
59 Ga0070695_100028581 3300005545 Unclassified 3461
60 Ga0070696_100047619 3300005546 Bacteria 2975
61 Ga0070704_100011954 3300005549 Bacteria 5348
62 Ga0070704_100040289 3300005549 Bacteria 3214
63 Ga0070664_100001460 3300005564 Bacteria 18823
64 Ga0070664_100001837 3300005564 Bacteria 17012
65 Ga0068857_100003433 3300005577 Bacteria 13224
66 Ga0068857_100114878 3300005577 Bacteria 2421
67 Ga0068856_100000347 3300005614 Bacteria 50484
68 Ga0068856_100003826 3300005614 Bacteria 15089
69 Ga0070702_100041148 3300005615 Bacteria 2589
70 Ga0070702_100063580 3300005615 Bacteria 2155
71 Ga0068859_100051309 3300005617 Bacteria 4146
72 Ga0068864_100072737 3300005618 Bacteria 2997
73 Ga0068851_10005768 3300005834 Bacteria 5640
74 Ga0068863_100011198 3300005841 Bacteria 8691
75 Ga0068860_100012449 3300005843 Bacteria 8377
76 Ga0068860_100102592 3300005843 Unclassified 2730
77 Ga0081455_10002232 3300005937 Bacteria 23063
78 Ga0081455_10019024 3300005937 Bacteria 6513
79 Ga0081539_10000239 3300005985 Bacteria 128819
80 Ga0081539_10007718 3300005985 Bacteria 9653
81 Ga0081539_10040025 3300005985 Bacteria 2757
82 Ga0070712_100000292 3300006175 Bacteria 28152
83 Ga0070712_100000430 3300006175 Bacteria 24028
84 Ga0097621_100005517 3300006237 Bacteria 8908
85 Ga0097621_100011525 3300006237 Bacteria 6515
86 Ga0068871_100008741 3300006358 Bacteria 7290
87 Ga0068871_100012146 3300006358 Bacteria 6339
88 Ga0068871_100015803 3300006358 Bacteria 5664
89 Ga0075428_100119780 3300006844 Bacteria 2865
90 Ga0075430_100065814 3300006846 Bacteria 3044
91 Ga0075431_100022349 3300006847 Bacteria 6465
92 Ga0075433_10094793 3300006852 Bacteria 2641
93 Ga0075429_100055712 3300006880 Bacteria 3440
94 Ga0097620_100051309 3300006931 Bacteria 4146
95 Ga0075435_100067339 3300007076 Bacteria 2915
96 Ga0099794_10000809 3300007265 Bacteria 10588
97 Ga0099794_10011798 3300007265 Unclassified 3752
98 Ga0105240_10022427 3300009093 Bacteria 8370
99 Ga0111539_10001354 3300009094 Bacteria 32628
100 Ga0111539_10015305 3300009094 Bacteria 9553
101 Ga0111539_10134030 3300009094 Unclassified 2900
102 Ga0105245_10049709 3300009098 Unclassified 3756
103 Ga0105247_10001453 3300009101 Bacteria 17109
104 Ga0114129_10024154 3300009147 Bacteria 8614
105 Ga0114129_10028746 3300009147 Bacteria 7877
106 Ga0114129_10041155 3300009147 Bacteria 6513
107 Ga0105243_10002883 3300009148 Bacteria 14248
108 Ga0105243_10003488 3300009148 Bacteria 12704
109 Ga0105243_10004134 3300009148 Bacteria 11540
110 Ga0105241_10008115 3300009174 Bacteria 7728
111 Ga0105242_10004189 3300009176 Bacteria 11242
112 Ga0105242_10025746 3300009176 Unclassified 4659
113 Ga0105242_10068044 3300009176 Bacteria 2945
114 Ga0105248_10012246 3300009177 Bacteria 9458
115 Ga0105248_10049671 3300009177 Bacteria 4704
116 Ga0105248_10072468 3300009177 Unclassified 3871
117 Ga0105248_10155894 3300009177 Unclassified 2577
118 Ga0105237_10004311 3300009545 Bacteria 16498
119 Ga0105237_10078226 3300009545 Bacteria 3297
120 Ga0105238_10009351 3300009551 Bacteria 9815
121 Ga0105239_10126609 3300010375 Bacteria 2839
122 Ga0105246_10042169 3300011119 Bacteria 3090
123 Ga0157378_10028834 3300013297 Bacteria 4899
124 Ga0163162_10010677 3300013306 Bacteria 8930
125 Ga0163162_10017608 3300013306 Bacteria 6990
126 Ga0163162_10137760 3300013306 Bacteria 2552
127 Ga0157372_10033078 3300013307 Bacteria 5677
128 Ga0157372_10040410 3300013307 Bacteria 5152
129 Ga0157372_10046747 3300013307 Unclassified 4806
130 Ga0157375_10026085 3300013308 Bacteria 5440
131 Ga0163163_10000582 3300014325 Bacteria 32145
132 Ga0163163_10007300 3300014325 Bacteria 9747
133 Ga0163163_10067019 3300014325 Bacteria 3567
134 Ga0163163_10090905 3300014325 Unclassified 3066
135 Ga0157380_10024524 3300014326 Bacteria 4565
136 Ga0157380_10113101 3300014326 Bacteria 2285
137 Ga0157376_10124538 3300014969 Bacteria 2290
138 Ga0163161_10032154 3300017792 Bacteria 3744
139 Ga0163161_10049562 3300017792 Bacteria 3036
140 Ga0213876_10000054 3300021384 Bacteria 136221
141 Ga0207697_10004443 3300025315 Bacteria 6700
142 Ga0207656_10004659 3300025321 Unclassified 4807
143 Ga0207653_10001777 3300025885 Bacteria 6892
144 Ga0207642_10009785 3300025899 Unclassified 3349
145 Ga0207710_10000394 3300025900 Bacteria 29448
146 Ga0207685_10005104 3300025905 Bacteria 3425
147 Ga0207684_10016871 3300025910 Bacteria 6271
148 Ga0207707_10000330 3300025912 Bacteria 49978
149 Ga0207707_10028982 3300025912 Bacteria 4838
150 Ga0207707_10091826 3300025912 Bacteria 2653
151 Ga0207671_10005510 3300025914 Bacteria 11645
152 Ga0207693_10000500 3300025915 Bacteria 35438
153 Ga0207693_10012352 3300025915 Bacteria 6899
154 Ga0207693_10015961 3300025915 Bacteria 6013
155 Ga0207660_10001425 3300025917 Bacteria 16046
156 Ga0207662_10005049 3300025918 Bacteria 6990
157 Ga0207652_10000839 3300025921 Bacteria 29313
158 Ga0207646_10004126 3300025922 Bacteria 15956
159 Ga0207681_10009036 3300025923 Bacteria 6088
160 Ga0207694_10001649 3300025924 Bacteria 18778
161 Ga0207650_10000061 3300025925 Bacteria 149822
162 Ga0207700_10001153 3300025928 Bacteria 15186
163 Ga0207664_10024809 3300025929 Unclassified 4509
164 Ga0207644_10017074 3300025931 Unclassified 4894
165 Ga0207690_10014452 3300025932 Bacteria 4769
166 Ga0207709_10061670 3300025935 Unclassified 2344
167 Ga0207669_10029165 3300025937 Bacteria 3047
168 Ga0207704_10036109 3300025938 Unclassified 2840
169 Ga0207691_10003511 3300025940 Bacteria 15252
170 Ga0207711_10004071 3300025941 Bacteria 12544
171 Ga0207689_10003908 3300025942 Bacteria 13573
172 Ga0207689_10010286 3300025942 Bacteria 8056
173 Ga0207689_10032383 3300025942 Bacteria 4349
174 Ga0207661_10000981 3300025944 Bacteria 18849
175 Ga0207677_10056224 3300026023 Bacteria 2694
176 Ga0207639_10024320 3300026041 Bacteria 4383
177 Ga0207639_10081178 3300026041 Bacteria 2568
178 Ga0207678_10015491 3300026067 Bacteria 6703
179 Ga0207708_10000073 3300026075 Bacteria 80597
180 Ga0207708_10042824 3300026075 Unclassified 3450
181 Ga0207708_10044252 3300026075 Bacteria 3392
182 Ga0207702_10001136 3300026078 Bacteria 27202
183 Ga0207702_10018322 3300026078 Bacteria 5791
184 Ga0207641_10025956 3300026088 Bacteria 4834
185 Ga0207676_10049582 3300026095 Bacteria 3267
186 Ga0207674_10000113 3300026116 Bacteria 93918
187 Ga0207683_10006560 3300026121 Bacteria 9963
188 Ga0207428_10000595 3300027907 Bacteria 42731
189 Ga0207428_10008606 3300027907 Bacteria 9213
190 Ga0268264_10083295 3300028381 Unclassified 2739
191 Ga0307405_10004185 3300031731 Bacteria 6790
192 Ga0307413_10010346 3300031824 Bacteria 4519
193 Ga0307413_10053981 3300031824 Bacteria 2436
194 Ga0307412_10000596 3300031911 Bacteria 21362
195 Ga0307412_10004643 3300031911 Bacteria 7654
196 Ga0307409_100009034 3300031995 Bacteria 6097
197 Ga0307409_100071441 3300031995 Unclassified 2760
198 Ga0307416_100035834 3300032002 Bacteria 3795
199 Ga0307414_10004979 3300032004 Bacteria 7265
200 Ga0373951_0000921 3300035091 Bacteria 7923
201 Ga0373925_0037218 3300037068 Bacteria 3592
202 Ga0395905_0007756 3300037471 Bacteria 10647
203 Ga0395901_0015717 3300038443 Bacteria 7710
204 Ga0436365_1074430 3300039437 Bacteria 14678
205 Ga0439458_0002979 3300042157 Bacteria 4054
206 Ga0495580_0001577 3300046472 Bacteria 20034
207 Ga0495580_0008383 3300046472 Bacteria 8223
208 Ga0495684_0040081 3300047471 Bacteria 3591
209 Ga0496101_0026388 3300048904 Bacteria 4039
210 Ga0496103_0067251 3300048906 Unclassified 2238
211 Ga0496104_0009441 3300048907 Bacteria 8676
212 Ga0496104_0044926 3300048907 Bacteria 4152
213 Ga0496106_0102980 3300048909 Bacteria 2215
214 Ga0496108_0002172 3300048911 Bacteria 15731
215 Ga0496109_0001277 3300048912 Bacteria 20892
216 Ga0496109_0067537 3300048912 Bacteria 3276
217 Ga0496110_0000914 3300048913 Bacteria 20679
218 Ga0496112_0000774 3300048915 Bacteria 22517
219 Ga0496112_0035790 3300048915 Bacteria 4839
220 Ga0501076_0002581 3300049592 Bacteria 12453
221 Ga0501217_001484 3300049661 Unclassified 4408
222 Ga0501223_006961 3300049663 Bacteria 2323
223 Ga0501249_004344 3300049679 Unclassified 2878
224 nmdc:mga0k408_8373_c1 3300050493 Bacteria 5547
225 nmdc:mga06z11_1543_c1 3300050494 Bacteria 8552
226 nmdc:mga05p37_146872_c1 3300050507 Bacteria 2886
227 nmdc:mga05p37_17960_c1 3300050507 Bacteria 8539
228 nmdc:mga05p37_4857_c1 3300050507 Bacteria 15731
229 nmdc:mga05p37_92314_c1 3300050507 Bacteria 3730
230 nmdc:mga09592_12834_c1 3300050508 Bacteria 6830
231 nmdc:mga08y16_178798_c1 3300050511 Bacteria 2203
232 nmdc:mga08y16_4488_c1 3300050511 Bacteria 14581
233 nmdc:mga08y16_5183_c1 3300050511 Bacteria 13614
234 nmdc:mga08y16_60677_c1 3300050511 Bacteria 3949
235 nmdc:mga0rr50_8300_c1 3300050513 Bacteria 6459
236 nmdc:mga0a205_39379_c1 3300050515 Bacteria 4549
237 nmdc:mga0a205_61710_c1 3300050515 Bacteria 3621
238 Ga0495601_0026289 3300053077 Bacteria 3593
239 Ga0495595_0007046 3300053084 Bacteria 4595
240 Ga0114129_10002957
241 JGI24751J29686_10000025
242 JGI25406J46586_10005646
243 JGI25406J46586_10026936
244 Ga0065714_10064430
245 Ga0065712_10000130
246 Ga0065712_10001597
247 Ga0065712_10004325
248 Ga0065712_10004460
249 Ga0065712_10069443
250 Ga0065715_10000306
251 Ga0065715_10092179
252 Ga0065715_10103384
253 Ga0065707_10007197
254 Ga0065707_10083928
255 Ga0070683_100001279
256 Ga0070670_100000300
257 Ga0070670_100011381
258 Ga0070666_10009612
259 Ga0070680_100007659
260 Ga0070682_100017774
261 Ga0070660_100080418
262 Ga0070692_10006414
263 Ga0070671_100001619
264 Ga0070688_100029091
265 Ga0070659_100000547
266 Ga0070703_10002766
267 Ga0070709_10013712
268 Ga0070714_100033599
269 Ga0070713_100001235
270 Ga0070713_100011414
271 Ga0070713_100104671
272 Ga0070711_100000908
273 Ga0070700_100000061
274 Ga0070694_100001310
275 Ga0070694_100016283
276 Ga0070694_100022316
277 Ga0070694_100067440
278 Ga0070694_100068565
279 Ga0070708_100002350
280 Ga0070681_10000328
281 Ga0070681_10000469
282 Ga0070681_10024814
283 Ga0068867_100014405
284 Ga0068867_100035681
285 Ga0070706_100008765
286 Ga0070706_100120409
287 Ga0070698_100000576
288 Ga0070699_100000642
289 Ga0070699_100001355
290 Ga0070699_100006349
291 Ga0070699_100076506
292 Ga0070679_100000491
293 Ga0070684_100000968
294 Ga0070697_100017063
295 Ga0070697_100024694
296 Ga0068853_100016911
297 Ga0070672_100027447
298 Ga0070695_100028581
299 Ga0070696_100047619
300 Ga0070704_100011954
301 Ga0070704_100040289
302 Ga0070664_100001460
303 Ga0070664_100001837
304 Ga0068857_100003433
305 Ga0068857_100114878
306 Ga0068856_100000347
307 Ga0068856_100003826
308 Ga0070702_100041148
309 Ga0070702_100063580
310 Ga0068859_100051309
311 Ga0068864_100072737
312 Ga0068851_10005768
313 Ga0068863_100011198
314 Ga0068860_100012449
315 Ga0068860_100102592
316 Ga0081455_10002232
317 Ga0081455_10019024
318 Ga0081539_10000239
319 Ga0081539_10007718
320 Ga0081539_10040025
321 Ga0070712_100000292
322 Ga0070712_100000430
323 Ga0097621_100005517
324 Ga0097621_100011525
325 Ga0068871_100008741
326 Ga0068871_100012146
327 Ga0068871_100015803
328 Ga0075428_100119780
329 Ga0075430_100065814
330 Ga0075431_100022349
331 Ga0075433_10094793
332 Ga0075429_100055712
333 Ga0097620_100051309
334 Ga0075435_100067339
335 Ga0099794_10000809
336 Ga0099794_10011798
337 Ga0105240_10022427
338 Ga0111539_10001354
339 Ga0111539_10015305
340 Ga0111539_10134030
341 Ga0105245_10049709
342 Ga0105247_10001453
343 Ga0114129_10024154
344 Ga0114129_10028746
345 Ga0114129_10041155
346 Ga0105243_10002883
347 Ga0105243_10003488
348 Ga0105243_10004134
349 Ga0105241_10008115
350 Ga0105242_10004189
351 Ga0105242_10025746
352 Ga0105242_10068044
353 Ga0105248_10012246
354 Ga0105248_10049671
355 Ga0105248_10072468
356 Ga0105248_10155894
357 Ga0105237_10004311
358 Ga0105237_10078226
359 Ga0105238_10009351
360 Ga0105239_10126609
361 Ga0105246_10042169
362 Ga0157378_10028834
363 Ga0163162_10010677
364 Ga0163162_10017608
365 Ga0163162_10137760
366 Ga0157372_10033078
367 Ga0157372_10040410
368 Ga0157372_10046747
369 Ga0157375_10026085
370 Ga0163163_10000582
371 Ga0163163_10007300
372 Ga0163163_10067019
373 Ga0163163_10090905
374 Ga0157380_10024524
375 Ga0157380_10113101
376 Ga0157376_10124538
377 Ga0163161_10032154
378 Ga0163161_10049562
379 Ga0213876_10000054
380 Ga0207697_10004443
381 Ga0207656_10004659
382 Ga0207653_10001777
383 Ga0207642_10009785
384 Ga0207710_10000394
385 Ga0207685_10005104
386 Ga0207684_10016871
387 Ga0207707_10000330
388 Ga0207707_10028982
389 Ga0207707_10091826
390 Ga0207671_10005510
391 Ga0207693_10000500
392 Ga0207693_10012352
393 Ga0207693_10015961
394 Ga0207660_10001425
395 Ga0207662_10005049
396 Ga0207652_10000839
397 Ga0207646_10004126
398 Ga0207681_10009036
399 Ga0207694_10001649
400 Ga0207650_10000061
401 Ga0207700_10001153
402 Ga0207664_10024809
403 Ga0207644_10017074
404 Ga0207690_10014452
405 Ga0207709_10061670
406 Ga0207669_10029165
407 Ga0207704_10036109
408 Ga0207691_10003511
409 Ga0207711_10004071
410 Ga0207689_10003908
411 Ga0207689_10010286
412 Ga0207689_10032383
413 Ga0207661_10000981
414 Ga0207677_10056224
415 Ga0207639_10024320
416 Ga0207639_10081178
417 Ga0207678_10015491
418 Ga0207708_10000073
419 Ga0207708_10042824
420 Ga0207708_10044252
421 Ga0207702_10001136
422 Ga0207702_10018322
423 Ga0207641_10025956
424 Ga0207676_10049582
425 Ga0207674_10000113
426 Ga0207683_10006560
427 Ga0207428_10000595
428 Ga0207428_10008606
429 Ga0268264_10083295
430 Ga0307405_10004185
431 Ga0307413_10010346
432 Ga0307413_10053981
433 Ga0307412_10000596
434 Ga0307412_10004643
435 Ga0307409_100009034
436 Ga0307409_100071441
437 Ga0307416_100035834
438 Ga0307414_10004979
439 Ga0373951_0000921
440 Ga0373925_0037218
441 Ga0395905_0007756
442 Ga0395901_0015717
443 Ga0436365_1074430
444 Ga0439458_0002979
445 Ga0495580_0001577
446 Ga0495580_0008383
447 Ga0495684_0040081
448 Ga0496101_0026388
449 Ga0496103_0067251
450 Ga0496104_0009441
451 Ga0496104_0044926
452 Ga0496106_0102980
453 Ga0496108_0002172
454 Ga0496109_0001277
455 Ga0496109_0067537
456 Ga0496110_0000914
457 Ga0496112_0000774
458 Ga0496112_0035790
459 Ga0501076_0002581
460 Ga0501217_001484
461 Ga0501223_006961
462 Ga0501249_004344
463 nmdc:mga0k408_8373_c1
464 nmdc:mga06z11_1543_c1
465 nmdc:mga05p37_146872_c1
466 nmdc:mga05p37_17960_c1
467 nmdc:mga05p37_4857_c1
468 nmdc:mga05p37_92314_c1
469 nmdc:mga09592_12834_c1
470 nmdc:mga08y16_178798_c1
471 nmdc:mga08y16_4488_c1
472 nmdc:mga08y16_5183_c1
473 nmdc:mga08y16_60677_c1
474 nmdc:mga0rr50_8300_c1
475 nmdc:mga0a205_39379_c1
476 nmdc:mga0a205_61710_c1
477 Ga0495601_0026289
478 Ga0495595_0007046

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06964

Alpha-L-AF_C

Alpha-L-arabinofuranosidase C-terminal domain

583

766

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ug3-assembly1.cif.gz_A crystal structure of alpha-l-arabinofuranosidase from thermotoga maritima ligand free form 0.9102 234 668
2c7f-assembly4.cif.gz_D the structure of a family 51 arabinofuranosidase, araf51, from clostridium thermocellum in complex with 1,5-alpha-l-arabinotriose. 0.9022 233 666
2y2w-assembly1.cif.gz_A elucidation of the substrate specificity and protein structure of abfb, a family 51 alpha-l-arabinofuranosidase from bifidobacterium longum. 0.8968 233 667
2y2w-assembly1.cif.gz_C elucidation of the substrate specificity and protein structure of abfb, a family 51 alpha-l-arabinofuranosidase from bifidobacterium longum. 0.8956 233 667
2y2w-assembly2.cif.gz_F elucidation of the substrate specificity and protein structure of abfb, a family 51 alpha-l-arabinofuranosidase from bifidobacterium longum. 0.8924 233 667
ID Description Score Start End Superfamily
af_A0A1D6JP54_86_163_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9058 597 666 2.60.40.1180
3ug4C01 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9019 551 668 2.60.40.1180
3ug3C02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8976 234 549 3.20.20.80
2y2wC02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8868 233 549 3.20.20.80
6d25A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.883 240 550 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A2V7TQQ9-F1-model_v4 non-reducing end alpha-L-arabinofuranosidase (EC 3.2.1.55) 0.9623 84 667 GO:0000272
GO:0046373
GO:0046556
AF-A0A524ANY0-F1-model_v4 Uncharacterized protein 0.9611 573 667
AF-A0A7W8E2D1-F1-model_v4 non-reducing end alpha-L-arabinofuranosidase (EC 3.2.1.55) 0.9569 28 668 GO:0000272
GO:0046373
GO:0046556
AF-A0A2V7TQQ9-F1-model_v4 non-reducing end alpha-L-arabinofuranosidase (EC 3.2.1.55) 0.9558 84 667 GO:0000272
GO:0046373
GO:0046556
AF-A0A2V6W1Y2-F1-model_v4 Alpha-L-arabinofuranosidase C-terminal domain-containing protein 0.9547 573 667 GO:0046373
GO:0046556

Map