F351085

General Info

Members Datasets Scaffolds Average Seq Length
238 200 476 769

Family's Representative Sequence

Representative Sequence 3300031507|Ga0307509_10039567|Ga0307509_100395673
Length 820
Sequence MRLIRRGKIGIDPSHIDGIRIGTMTFKKKRAFYIGGTSWLLLCAVGNHAIAQDAATPPSSTQLPEITVTAPSPIVRRRAVVPSRTPVRVARTAPGQNRQRAAEPQAAPVAAAPQQGVLPVVADQFATVTVVPNEEIRRQGTAQLGDLLFSKPGITGSTFAPGASSRPIIRGLDVNRVGILENGNNAGGASDLGEDHFVPIDPLATNQVEVIRGPAALRYGSTSIGGVVSATNNRIPDALPTCAAVPFQSYGLPAKAPLANAQTSSCVNVETRTSVSSVDRGVDSGILLDAGGGNFAFHADAYGRKASDYSIPSYPYLFDQTRPVNGRQPNSAMQADGASIGGSYIFQGGFIGAAITQNDTLYRIPGIDGADHQTRIDGHQTKFTAKGEYRPDAAAIDAVRFWAGATNYHHNEIGLADPADPSTVGIRQQFTNKEQEGRLEVQMMPFNARFAAVTTAFGLQAGHQELTAPSPDDPTSPLNGLWDPNRNNRVAGYVFNELKFSETTKAQIAGRIERVNLTGTTPEFIPDVFDLNVDPAAIGPATPRNLHFTPKSASVGLLQDLPWGLVASITGQYVERAPKPAELFSRGAHDATATFDIGNPNLGIETAKSIEIGLRRATGPLRFEATAYYTKFNGFIFRRLTGNTCEDVACVGPADPGFPLELKQAIYSQRDATFRGGEFQSQLDVGPLNGGIWGVESQFDVVRATFSDGTNVPRIPPVRVGGGLFWRDANWLARINLLHAFAQNDIAPIGETPTAGYNLLKAEVSYRTKLDPSWFGAREMLVGLVGNNLLNENIRNSVSYNKDEVLLPGIGVRAFANLKF

Samples

Sample ID Description Type Environment
1 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
36 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
37 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
54 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
55 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
56 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
57 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
58 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
75 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
76 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
77 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
80 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
81 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
82 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
83 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
86 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
87 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
88 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
89 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
90 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
91 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
92 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
100 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
101 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
102 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
103 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
104 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
107 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
108 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
109 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
112 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
113 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
114 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
115 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
116 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
119 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
127 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
128 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
143 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
144 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
145 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
151 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
152 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
153 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
154 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
155 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
156 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
159 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
160 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
161 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
162 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
163 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
164 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
165 2617270741 Bradyrhizobium yuanmingense CCBAU 10071 Isolate Nodule
166 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
167 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
168 2791355199
169 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
170 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
171 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
172 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
173 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
174 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
175 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
176 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
177 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
178 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
179 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
180 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
181 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
182 2904699407
183 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
184 2906610324
185 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
186 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
187 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
188 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
189 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
190 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
191 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
192 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
193 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
194 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
195 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
196 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
197 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
198 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
199 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
200 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 82.98
Metatranscriptomes 0
Isolates 17.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.82
Nodule 14.71
Rhizoplane 8.82
Rhizosphere 55.46
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307509_10039567 3300031507 Bacteria 5136
2 JGI25406J46586_10000753 3300003203 Bacteria 15123
3 JGI25406J46586_10005588 3300003203 Bacteria 5824
4 JGI25153J46596_10000987 3300003215 Bacteria 17281
5 JGI25404J52841_10002615 3300003659 Bacteria 3435
6 Ga0070683_100044088 3300005329 Bacteria 4112
7 Ga0070690_100010173 3300005330 Bacteria 5465
8 Ga0068869_100014021 3300005334 Bacteria 5347
9 Ga0068868_100039513 3300005338 Bacteria 3666
10 Ga0070689_100017969 3300005340 Bacteria 5200
11 Ga0070668_100013421 3300005347 Bacteria 6114
12 Ga0070668_100028790 3300005347 Bacteria 4215
13 Ga0070688_100009487 3300005365 Bacteria 5325
14 Ga0070663_100015484 3300005455 Bacteria 4925
15 Ga0070678_100015960 3300005456 Bacteria 4787
16 Ga0070662_100047773 3300005457 Bacteria 3080
17 Ga0070681_10017048 3300005458 Bacteria 7259
18 Ga0068867_100009058 3300005459 Bacteria 7023
19 Ga0068853_100003858 3300005539 Bacteria 11487
20 Ga0070665_100004831 3300005548 Bacteria 14001
21 Ga0070665_100023877 3300005548 Bacteria 6160
22 Ga0070665_100039424 3300005548 Bacteria 4749
23 Ga0070704_100061630 3300005549 Bacteria 2685
24 Ga0068855_100053360 3300005563 Bacteria 4756
25 Ga0068857_100061261 3300005577 Bacteria 3343
26 Ga0068851_10014390 3300005834 Bacteria 3757
27 Ga0068860_100045132 3300005843 Bacteria 4201
28 Ga0081455_10003587 3300005937 Bacteria 17806
29 Ga0081455_10004463 3300005937 Bacteria 15684
30 Ga0081540_1000150 3300005983 Bacteria 71934
31 Ga0081540_1002485 3300005983 Bacteria 15010
32 Ga0081540_1002765 3300005983 Bacteria 14238
33 Ga0081540_1005350 3300005983 Bacteria 9601
34 Ga0081540_1005717 3300005983 Bacteria 9225
35 Ga0081540_1011868 3300005983 Bacteria 5786
36 Ga0081540_1023694 3300005983 Bacteria 3583
37 Ga0081540_1028046 3300005983 Bacteria 3173
38 Ga0081539_10000306 3300005985 Bacteria 110402
39 Ga0081539_10001290 3300005985 Bacteria 44006
40 Ga0075368_10014351 3300006042 Bacteria 2924
41 Ga0075363_100000763 3300006048 Bacteria 11025
42 Ga0075363_100005164 3300006048 Bacteria 5776
43 Ga0075362_10024049 3300006177 Bacteria 2581
44 Ga0075370_10015856 3300006353 Bacteria 4044
45 Ga0075428_100004608 3300006844 Bacteria 15246
46 Ga0075431_100000249 3300006847 Bacteria 40919
47 Ga0075429_100001383 3300006880 Bacteria 19818
48 Ga0075436_100002896 3300006914 Bacteria 11768
49 Ga0099824_1002861 3300006942 Bacteria 25261
50 Ga0099794_10018740 3300007265 Bacteria 3106
51 Ga0105250_10007836 3300009092 Bacteria 4568
52 Ga0105240_10042030 3300009093 Bacteria 5828
53 Ga0111539_10000514 3300009094 Bacteria 49127
54 Ga0114129_10000242 3300009147 Bacteria 61249
55 Ga0105243_10033390 3300009148 Bacteria 3979
56 Ga0105241_10050338 3300009174 Bacteria 3174
57 Ga0105248_10002994 3300009177 Bacteria 18733
58 Ga0105248_10134841 3300009177 Bacteria 2785
59 Ga0105237_10011615 3300009545 Bacteria 9319
60 Ga0105238_10004548 3300009551 Bacteria 13726
61 Ga0105239_10040609 3300010375 Bacteria 5098
62 Ga0105239_10055165 3300010375 Bacteria 4358
63 Ga0157370_10015383 3300013104 Bacteria 7775
64 Ga0157374_10076292 3300013296 Bacteria 3169
65 Ga0157378_10052210 3300013297 Bacteria 3637
66 Ga0163162_10025178 3300013306 Bacteria 5881
67 Ga0157375_10105895 3300013308 Bacteria 2903
68 Ga0157380_10028094 3300014326 Bacteria 4285
69 Ga0214544_1000136 3300021320 Bacteria 107814
70 Ga0214542_1000127 3300021321 Bacteria 107829
71 Ga0214545_1000063 3300021324 Bacteria 107829
72 Ga0214543_1000238 3300021327 Bacteria 84004
73 Ga0209758_1000438 3300025297 Bacteria 70094
74 Ga0209758_1005046 3300025297 Bacteria 10487
75 Ga0209758_1011870 3300025297 Bacteria 4967
76 Ga0207697_10026905 3300025315 Bacteria 2353
77 Ga0207707_10002176 3300025912 Bacteria 17733
78 Ga0207662_10013459 3300025918 Bacteria 4576
79 Ga0207694_10007024 3300025924 Bacteria 8550
80 Ga0207687_10043643 3300025927 Bacteria 3090
81 Ga0207664_10047692 3300025929 Bacteria 3366
82 Ga0207706_10020987 3300025933 Bacteria 5866
83 Ga0207670_10010282 3300025936 Bacteria 5381
84 Ga0207689_10017741 3300025942 Bacteria 6014
85 Ga0207689_10027292 3300025942 Bacteria 4780
86 Ga0207689_10052907 3300025942 Bacteria 3345
87 Ga0207667_10014673 3300025949 Bacteria 8921
88 Ga0207668_10006685 3300025972 Bacteria 6819
89 Ga0207639_10034474 3300026041 Bacteria 3740
90 Ga0207678_10028053 3300026067 Bacteria 4916
91 Ga0207678_10047838 3300026067 Bacteria 3698
92 Ga0207708_10041260 3300026075 Bacteria 3518
93 Ga0207648_10047404 3300026089 Bacteria 3766
94 Ga0207675_100043217 3300026118 Bacteria 4208
95 Ga0209389_1000220 3300027296 Bacteria 39275
96 Ga0209589_1000007 3300027357 Bacteria 425699
97 Ga0209489_100008 3300027361 Bacteria 425699
98 Ga0209700_100009 3300027363 Bacteria 425699
99 Ga0209700_100026 3300027363 Bacteria 224498
100 Ga0268266_10000446 3300028379 Bacteria 61283
101 Ga0268266_10000670 3300028379 Bacteria 46181
102 Ga0265334_10007225 3300028573 Bacteria 4763
103 Ga0265318_10017614 3300028577 Bacteria 2929
104 Ga0265323_10001376 3300028653 Bacteria 12042
105 Ga0265336_10000598 3300028666 Bacteria 20180
106 Ga0307517_10000512 3300028786 Bacteria 66501
107 Ga0307515_10119871 3300028794 Bacteria 2989
108 Ga0265338_10000116 3300028800 Bacteria 146839
109 Ga0265328_10000076 3300031239 Bacteria 51815
110 Ga0307510_10069150 3300033180 Bacteria 3538
111 Ga0315911_1000004 3300033442 Bacteria 472637
112 Ga0373936_0001864 3300035113 Bacteria 7777
113 Ga0373943_0008517 3300035170 Bacteria 4599
114 Ga0373927_0000346 3300035695 Bacteria 36389
115 Ga0373947_0004475 3300035725 Bacteria 8204
116 Ga0373937_0013906 3300036401 Bacteria 7096
117 Ga0395905_0050339 3300037471 Bacteria 3903
118 Ga0395901_0007952 3300038443 Bacteria 10699
119 Ga0495592_0013756 3300046454 Bacteria 6154
120 Ga0495603_0000092 3300046455 Bacteria 40980
121 Ga0495603_0002697 3300046455 Bacteria 10468
122 Ga0495603_0023962 3300046455 Bacteria 3692
123 Ga0495629_0000181 3300046459 Bacteria 56739
124 Ga0495629_0049617 3300046459 Bacteria 2941
125 Ga0495638_0014807 3300046460 Bacteria 5258
126 Ga0495580_0001467 3300046472 Bacteria 20684
127 Ga0495582_0000039 3300046473 Bacteria 66883
128 Ga0495639_0000441 3300046475 Bacteria 19762
129 Ga0495664_0003150 3300046477 Bacteria 8954
130 Ga0495585_0008045 3300046492 Bacteria 6410
131 Ga0495606_0003171 3300046507 Bacteria 17767
132 Ga0495630_0006011 3300046517 Bacteria 8588
133 Ga0495666_0012700 3300046526 Bacteria 4197
134 Ga0495665_0000079 3300046531 Bacteria 42321
135 Ga0495640_0002836 3300046533 Bacteria 13937
136 Ga0495634_0003577 3300046642 Bacteria 12427
137 Ga0495635_0001923 3300046663 Bacteria 14132
138 Ga0495647_0001821 3300046681 Bacteria 6593
139 Ga0495658_0002050 3300046683 Bacteria 10251
140 Ga0495624_0001851 3300046690 Bacteria 16133
141 Ga0495581_0006605 3300047315 Bacteria 6720
142 Ga0495674_0034854 3300047319 Bacteria 4547
143 Ga0495684_0014100 3300047471 Bacteria 6149
144 Ga0495614_0004202 3300048089 Bacteria 6488
145 Ga0496100_0013312 3300048903 Bacteria 4740
146 Ga0496101_0003092 3300048904 Bacteria 10291
147 Ga0496103_0034127 3300048906 Bacteria 3111
148 Ga0496104_0075246 3300048907 Bacteria 3215
149 Ga0496106_0019901 3300048909 Bacteria 4977
150 Ga0496107_0000906 3300048910 Bacteria 17468
151 Ga0496107_0097073 3300048910 Bacteria 2157
152 Ga0496108_0061577 3300048911 Bacteria 3158
153 Ga0496108_0082504 3300048911 Bacteria 2726
154 Ga0496109_0024780 3300048912 Bacteria 5337
155 Ga0496110_0079151 3300048913 Bacteria 2926
156 Ga0496111_0008473 3300048914 Bacteria 6810
157 Ga0496111_0017165 3300048914 Bacteria 5000
158 Ga0496112_0000142 3300048915 Bacteria 44742
159 Ga0496112_0033448 3300048915 Bacteria 4998
160 Ga0496112_0119478 3300048915 Bacteria 2606
161 Ga0496113_0039737 3300048916 Bacteria 3464
162 Ga0496114_0013076 3300048917 Bacteria 6649
163 Ga0496114_0051508 3300048917 Bacteria 3428
164 Ga0496115_0007033 3300048918 Bacteria 8267
165 Ga0496121_0000365 3300048924 Bacteria 92822
166 Ga0496121_0059654 3300048924 Bacteria 3144
167 Ga0496121_0085563 3300048924 Bacteria 2481
168 Ga0496125_0001098 3300048928 Bacteria 41637
169 Ga0496125_0016960 3300048928 Bacteria 6965
170 Ga0496126_0001612 3300048929 Bacteria 34184
171 Ga0496126_0044104 3300048929 Bacteria 4109
172 Ga0501031_0005252 3300049568 Bacteria 8442
173 Ga0501033_0007193 3300049570 Bacteria 8687
174 Ga0501036_0018679 3300049572 Bacteria 5813
175 Ga0501038_0013937 3300049574 Bacteria 7327
176 Ga0501046_0016652 3300049580 Bacteria 6152
177 Ga0501047_0030720 3300049581 Bacteria 5178
178 nmdc:mga03n38_46_c1 3300050490 Bacteria 10785
179 nmdc:mga0yw44_9404_c1 3300050492 Bacteria 4940
180 nmdc:mga06z11_2661_c1 3300050494 Bacteria 6845
181 nmdc:mga07m45_1422_c2 3300050496 Bacteria 7919
182 nmdc:mga05p37_7097_c1 3300050507 Bacteria 13206
183 nmdc:mga09592_1312_c1 3300050508 Bacteria 19961
184 nmdc:mga06r32_528_c1 3300050510 Bacteria 32999
185 nmdc:mga08y16_125_c1 3300050511 Bacteria 66606
186 nmdc:mga08x19_18222_c1 3300050514 Bacteria 4303
187 Ga0500651_0043146 3300053093 Bacteria 2840
188 Ga0500595_001079 3300053119 Bacteria 15134
189 Ga0500595_001982 3300053119 Bacteria 10511
190 Ga0500595_009875 3300053119 Bacteria 3827
191 Ga0500577_0001047 3300053142 Bacteria 7130
192 Ga0500638_000120 3300053162 Bacteria 15133
193 Ga0500637_0000070 3300053178 Bacteria 36880
194 Ga0500661_000311 3300055283 Bacteria 8873
195 Ga0501082_0000230 3300060353 Bacteria 48963
196 2513637200 2513237094 Bacteria 8789602
197 2513655784 2513237096 Bacteria 8722461
198 2513693283 2513237101 Bacteria 7952346
199 2513856721 2513237137 Bacteria 9558895
200 2513917303 2513237145 Bacteria 8979722
201 2517895412 2517572143 Bacteria 9484767
202 2524540486 2524023228 Bacteria 10118060
203 2617377767 2617270741 Bacteria 8201522
204 2671122087 2667528175 Bacteria 7532676
205 2723848193 2721755755 Bacteria 8322773
206 2793078098
207 2824739932 2824732956 Bacteria 7810675
208 2824753534 2824746037 Bacteria 7911610
209 2824767936 2824763712 Bacteria 9792355
210 2841965538 2841957949 Bacteria 8652217
211 2874608819 2874604998 Bacteria 7834745
212 2879115452 2879110137 Bacteria 8907982
213 2881668824 2881665667 Bacteria 8175609
214 2885368442 2885366525 Bacteria 8326213
215 2885378923 2885374607 Bacteria 8927485
216 2885410024 2885409591 Bacteria 9235467
217 2889037291 2889033259 Bacteria 9099371
218 2903759092 2903748898 Bacteria 9972761
219 2904698753 2904690495 Bacteria 9412302
220 2904710875
221 2904717675 2904711408 Bacteria 9771557
222 2906615979
223 2906639066 2906635258 Bacteria 8601019
224 2906665211 2906660503 Bacteria 8595048
225 2908782186 2908775508 Bacteria 8092255
226 2922361422 2922361189 Bacteria 7436256
227 2922388845 2922386360 Bacteria 7017218
228 2941507720 2941507105 Bacteria 8166816
229 2941516147 2941515067 Bacteria 8166720
230 2941523145 2941523033 Bacteria 8169134
231 3005594426 3005587118 Bacteria 7794411
232 8006934497 8006933436 Bacteria 10410654
233 8006970863 8006964411 Bacteria 8966052
234 8006974467 8006973647 Bacteria 10679141
235 8006985246 8006984368 Bacteria 9651211
236 8006998568 8006994254 Bacteria 8309700
237 8056675899 8056673599 Bacteria 7871253
238 8056690319 8056689827 Bacteria 6712655
239 Ga0307509_10039567
240 JGI25406J46586_10000753
241 JGI25406J46586_10005588
242 JGI25153J46596_10000987
243 JGI25404J52841_10002615
244 Ga0070683_100044088
245 Ga0070690_100010173
246 Ga0068869_100014021
247 Ga0068868_100039513
248 Ga0070689_100017969
249 Ga0070668_100013421
250 Ga0070668_100028790
251 Ga0070688_100009487
252 Ga0070663_100015484
253 Ga0070678_100015960
254 Ga0070662_100047773
255 Ga0070681_10017048
256 Ga0068867_100009058
257 Ga0068853_100003858
258 Ga0070665_100004831
259 Ga0070665_100023877
260 Ga0070665_100039424
261 Ga0070704_100061630
262 Ga0068855_100053360
263 Ga0068857_100061261
264 Ga0068851_10014390
265 Ga0068860_100045132
266 Ga0081455_10003587
267 Ga0081455_10004463
268 Ga0081540_1000150
269 Ga0081540_1002485
270 Ga0081540_1002765
271 Ga0081540_1005350
272 Ga0081540_1005717
273 Ga0081540_1011868
274 Ga0081540_1023694
275 Ga0081540_1028046
276 Ga0081539_10000306
277 Ga0081539_10001290
278 Ga0075368_10014351
279 Ga0075363_100000763
280 Ga0075363_100005164
281 Ga0075362_10024049
282 Ga0075370_10015856
283 Ga0075428_100004608
284 Ga0075431_100000249
285 Ga0075429_100001383
286 Ga0075436_100002896
287 Ga0099824_1002861
288 Ga0099794_10018740
289 Ga0105250_10007836
290 Ga0105240_10042030
291 Ga0111539_10000514
292 Ga0114129_10000242
293 Ga0105243_10033390
294 Ga0105241_10050338
295 Ga0105248_10002994
296 Ga0105248_10134841
297 Ga0105237_10011615
298 Ga0105238_10004548
299 Ga0105239_10040609
300 Ga0105239_10055165
301 Ga0157370_10015383
302 Ga0157374_10076292
303 Ga0157378_10052210
304 Ga0163162_10025178
305 Ga0157375_10105895
306 Ga0157380_10028094
307 Ga0214544_1000136
308 Ga0214542_1000127
309 Ga0214545_1000063
310 Ga0214543_1000238
311 Ga0209758_1000438
312 Ga0209758_1005046
313 Ga0209758_1011870
314 Ga0207697_10026905
315 Ga0207707_10002176
316 Ga0207662_10013459
317 Ga0207694_10007024
318 Ga0207687_10043643
319 Ga0207664_10047692
320 Ga0207706_10020987
321 Ga0207670_10010282
322 Ga0207689_10017741
323 Ga0207689_10027292
324 Ga0207689_10052907
325 Ga0207667_10014673
326 Ga0207668_10006685
327 Ga0207639_10034474
328 Ga0207678_10028053
329 Ga0207678_10047838
330 Ga0207708_10041260
331 Ga0207648_10047404
332 Ga0207675_100043217
333 Ga0209389_1000220
334 Ga0209589_1000007
335 Ga0209489_100008
336 Ga0209700_100009
337 Ga0209700_100026
338 Ga0268266_10000446
339 Ga0268266_10000670
340 Ga0265334_10007225
341 Ga0265318_10017614
342 Ga0265323_10001376
343 Ga0265336_10000598
344 Ga0307517_10000512
345 Ga0307515_10119871
346 Ga0265338_10000116
347 Ga0265328_10000076
348 Ga0307510_10069150
349 Ga0315911_1000004
350 Ga0373936_0001864
351 Ga0373943_0008517
352 Ga0373927_0000346
353 Ga0373947_0004475
354 Ga0373937_0013906
355 Ga0395905_0050339
356 Ga0395901_0007952
357 Ga0495592_0013756
358 Ga0495603_0000092
359 Ga0495603_0002697
360 Ga0495603_0023962
361 Ga0495629_0000181
362 Ga0495629_0049617
363 Ga0495638_0014807
364 Ga0495580_0001467
365 Ga0495582_0000039
366 Ga0495639_0000441
367 Ga0495664_0003150
368 Ga0495585_0008045
369 Ga0495606_0003171
370 Ga0495630_0006011
371 Ga0495666_0012700
372 Ga0495665_0000079
373 Ga0495640_0002836
374 Ga0495634_0003577
375 Ga0495635_0001923
376 Ga0495647_0001821
377 Ga0495658_0002050
378 Ga0495624_0001851
379 Ga0495581_0006605
380 Ga0495674_0034854
381 Ga0495684_0014100
382 Ga0495614_0004202
383 Ga0496100_0013312
384 Ga0496101_0003092
385 Ga0496103_0034127
386 Ga0496104_0075246
387 Ga0496106_0019901
388 Ga0496107_0000906
389 Ga0496107_0097073
390 Ga0496108_0061577
391 Ga0496108_0082504
392 Ga0496109_0024780
393 Ga0496110_0079151
394 Ga0496111_0008473
395 Ga0496111_0017165
396 Ga0496112_0000142
397 Ga0496112_0033448
398 Ga0496112_0119478
399 Ga0496113_0039737
400 Ga0496114_0013076
401 Ga0496114_0051508
402 Ga0496115_0007033
403 Ga0496121_0000365
404 Ga0496121_0059654
405 Ga0496121_0085563
406 Ga0496125_0001098
407 Ga0496125_0016960
408 Ga0496126_0001612
409 Ga0496126_0044104
410 Ga0501031_0005252
411 Ga0501033_0007193
412 Ga0501036_0018679
413 Ga0501038_0013937
414 Ga0501046_0016652
415 Ga0501047_0030720
416 nmdc:mga03n38_46_c1
417 nmdc:mga0yw44_9404_c1
418 nmdc:mga06z11_2661_c1
419 nmdc:mga07m45_1422_c2
420 nmdc:mga05p37_7097_c1
421 nmdc:mga09592_1312_c1
422 nmdc:mga06r32_528_c1
423 nmdc:mga08y16_125_c1
424 nmdc:mga08x19_18222_c1
425 Ga0500651_0043146
426 Ga0500595_001079
427 Ga0500595_001982
428 Ga0500595_009875
429 Ga0500577_0001047
430 Ga0500638_000120
431 Ga0500637_0000070
432 Ga0500661_000311
433 Ga0501082_0000230
434 2513637200
435 2513655784
436 2513693283
437 2513856721
438 2513917303
439 2517895412
440 2524540486
441 2617377767
442 2671122087
443 2723848193
444 2793078098
445 2824739932
446 2824753534
447 2824767936
448 2841965538
449 2874608819
450 2879115452
451 2881668824
452 2885368442
453 2885378923
454 2885410024
455 2889037291
456 2903759092
457 2904698753
458 2904710875
459 2904717675
460 2906615979
461 2906639066
462 2906665211
463 2908782186
464 2922361422
465 2922388845
466 2941507720
467 2941516147
468 2941523145
469 3005594426
470 8006934497
471 8006970863
472 8006974467
473 8006985246
474 8006998568
475 8056675899
476 8056690319

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

120

227

0.96

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

294

789

0.63

Structural Annotation

Top 5 Hits

ID Description Score Start End
4rvw-assembly1.cif.gz_A structure of the bacterial zn-transporter znud from neisseria meningitidis (soaked with 20 micromolar zinc) 0.9096 76 770
4rvw-assembly1.cif.gz_A structure of the bacterial zn-transporter znud from neisseria meningitidis (soaked with 20 micromolar zinc) 0.901 76 770
4rdt-assembly2.cif.gz_B structure of the bacterial zn-transporter znud from neisseria meningitidis (flexible conformation bound to a zinc ion) 0.8764 76 770
4rdt-assembly1.cif.gz_A structure of the bacterial zn-transporter znud from neisseria meningitidis (flexible conformation bound to a zinc ion) 0.8756 76 770
4rdt-assembly2.cif.gz_B structure of the bacterial zn-transporter znud from neisseria meningitidis (flexible conformation bound to a zinc ion) 0.8644 76 770
ID Description Score Start End Superfamily
4rdrA01 Mainly Beta;Beta Complex;Ferric Hydroxamate Uptake Protein; Chain A, domain 1;TonB-dependent receptor, plug domain 0.7898 64 192 2.170.130.10
4rdrA01 Mainly Beta;Beta Complex;Ferric Hydroxamate Uptake Protein; Chain A, domain 1;TonB-dependent receptor, plug domain 0.7839 64 192 2.170.130.10
3fhhA01 Mainly Beta;Beta Complex;Ferric Hydroxamate Uptake Protein; Chain A, domain 1;TonB-dependent receptor, plug domain 0.7806 83 187 2.170.130.10
3fhhA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7733 222 770 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7714 222 770 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A2W5HGI8-F1-model_v4 deleted 0.9066 77 583
AF-A0A4Q2YUM5-F1-model_v4 TonB-dependent receptor 0.8968 135 720 GO:0009279
GO:0015344
AF-A0A4Q2YUM5-F1-model_v4 TonB-dependent receptor 0.8839 135 720 GO:0009279
GO:0015344
AF-A0A3B9FWS5-F1-model_v4 TonB-dependent receptor 0.8418 83 770 GO:0009279
GO:0015344
AF-A0A537TQ15-F1-model_v4 TonB-dependent receptor 0.8276 24 620 GO:0009279
GO:0015344

Map