F351007

General Info

Members Datasets Scaffolds Average Seq Length
238 159 238 947

Family's Representative Sequence

Representative Sequence 3300025913|Ga0207695_10021944|Ga0207695_100219444
Length 986
Sequence MTENASTPARSAARRSGPLRPAGKLGTALSKLLGLCLLGCVAAVGQARNPPDASATAAVQRPPPAAQMAQQAAAVEGNPDWAVTLERIASSVVSIDIDATRAFDTEWNATAQATGFVVDAERGLILTNRHVVTPGPVTAEATFLNREEVQLYPVYRDPVHDFGFYHYDPSKLHFIKPKALPLYPEGAQVGREIRVVGNNAGEQLSILAGTLARLDREAPEYGIGKYNDFNTFYFQAASGTSGGSSGSPVIDIHGRVVALNAGGANGNASSFYLPLTRVRRALEAIQQGKPVARGTLDTVFNYTPFDELKRLGLTSDIEAAVRKSFPQYTGMLVVTGVLPGSPSENVLQPGDILVKVNNRYVTQFDPLDEVIDDSVGHEVSLELERGGKPIAAKLPVSNLHAITPSSYDEFGDAVVHTLSYQQARHFNVPVRGVYVANPGYVFGAAGIPRGAVITSMDSKRIDKLGDFEAELAQLGDGDRATVRYITIDDPNGSNLRSIRMDRLWFPARHCERDDNLGVWPCKDLPAGPAPKERPVNSTEFPKYKDPRLAALAPSLVSVTFDMPYSVSGITERNYHGTGVVVDAEHGLVVVDRNTVPVSIGNVTITFAGTVEVPGRVVYVHPVHNLAVVAYDPKLIGATPVKAAKLTPRELSAGESVWVVGLGADSQLHSRNTEIASIDPLELPLSRTMRFRDSNIEVAQLVNPPLEFDGVLADKSGNVLGMWSSFAYESGREVAQDNRGVPIDLVTAMLDHVHTDRPLHSLETELSVQPLSTAQELGLSEDWIKKLAEHNPTMRQALSVVRLVGGSPAARLLQQGDLVLAIDGKVVTRFKEVESAVADRNEVQVTVWRGKGEQTVNVQTVELPGTDIDRIVEWGGATLQAPHRAMSAQRGIPPVGVYVGYFAYGSPATRYGLYPGRRIVEVDGVPTPDLDAFLGAVSKRPDRASVRLKTITWNNAPEVITLKLDKHYWPSYELVHSTNGWVRRSLE

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
58 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
88 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
89 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
90 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
91 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
92 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
93 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
97 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
100 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
101 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
102 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
103 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
104 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
105 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
106 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
109 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
110 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
111 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
115 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
118 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
119 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
120 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
121 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
122 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
135 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
136 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
137 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
152 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
153 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
154 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
155 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
159 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.52
Nodule 0
Rhizoplane 2.1
Rhizosphere 87.82
Stem 0
Stem Tuber 0
Unclassified 7.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10001709 3300003322 Bacteria 5490
2 Ga0065704_10000527 3300005289 Bacteria 22779
3 Ga0065707_10082074 3300005295 Bacteria 22636
4 Ga0070690_100003308 3300005330 Bacteria 8797
5 Ga0068869_100040431 3300005334 Bacteria 3335
6 Ga0070666_10033076 3300005335 Bacteria 3419
7 Ga0070680_100000542 3300005336 Bacteria 25831
8 Ga0070661_100023559 3300005344 Bacteria 4414
9 Ga0070675_100001117 3300005354 Bacteria 19355
10 Ga0070675_100009337 3300005354 Bacteria 7628
11 Ga0070671_100000899 3300005355 Bacteria 21689
12 Ga0070667_100000008 3300005367 Bacteria 285591
13 Ga0070667_100003854 3300005367 Bacteria 12738
14 Ga0070667_100017364 3300005367 Bacteria 5963
15 Ga0070709_10010365 3300005434 Bacteria 5160
16 Ga0070713_100036355 3300005436 Bacteria 3973
17 Ga0070701_10004265 3300005438 Bacteria 5765
18 Ga0070694_100014956 3300005444 Bacteria 4862
19 Ga0070678_100005367 3300005456 Bacteria 7393
20 Ga0070681_10001920 3300005458 Bacteria 18748
21 Ga0070681_10003020 3300005458 Bacteria 15616
22 Ga0070681_10005296 3300005458 Bacteria 12457
23 Ga0070681_10018155 3300005458 Bacteria 7032
24 Ga0070681_10020597 3300005458 Bacteria 6609
25 Ga0070681_10033099 3300005458 Bacteria 5189
26 Ga0070699_100032237 3300005518 Bacteria 4524
27 Ga0070679_100000441 3300005530 Bacteria 35288
28 Ga0070679_100040065 3300005530 Bacteria 4659
29 Ga0070679_100047006 3300005530 Bacteria 4303
30 Ga0070679_100070127 3300005530 Unclassified 3497
31 Ga0070686_100006098 3300005544 Bacteria 6692
32 Ga0070696_100000845 3300005546 Bacteria 19738
33 Ga0070665_100002652 3300005548 Bacteria 19458
34 Ga0070665_100003990 3300005548 Bacteria 15564
35 Ga0070665_100009538 3300005548 Bacteria 9818
36 Ga0070665_100016773 3300005548 Bacteria 7342
37 Ga0070665_100020822 3300005548 Bacteria 6591
38 Ga0070665_100022841 3300005548 Bacteria 6298
39 Ga0068855_100010648 3300005563 Bacteria 11091
40 Ga0068855_100023190 3300005563 Bacteria 7435
41 Ga0068855_100077279 3300005563 Bacteria 3862
42 Ga0068855_100107716 3300005563 Bacteria 3202
43 Ga0068859_100000383 3300005617 Bacteria 44155
44 Ga0068859_100019869 3300005617 Bacteria 6744
45 Ga0068861_100001342 3300005719 Bacteria 15453
46 Ga0068863_100002072 3300005841 Bacteria 19890
47 Ga0068863_100023721 3300005841 Bacteria 5854
48 Ga0068863_100024915 3300005841 Bacteria 5707
49 Ga0068858_100000780 3300005842 Bacteria 33267
50 Ga0068860_100001612 3300005843 Bacteria 24250
51 Ga0068862_100039321 3300005844 Unclassified 4017
52 Ga0081455_10000192 3300005937 Bacteria 77713
53 Ga0081455_10013788 3300005937 Bacteria 7953
54 Ga0081539_10000011 3300005985 Bacteria 461887
55 Ga0070715_10000254 3300006163 Bacteria 12873
56 Ga0070716_100001120 3300006173 Bacteria 11808
57 Ga0070712_100000537 3300006175 Bacteria 21852
58 Ga0097621_100031920 3300006237 Bacteria 4182
59 Ga0068871_100006446 3300006358 Bacteria 8305
60 Ga0075428_100003393 3300006844 Bacteria 17414
61 Ga0075434_100017768 3300006871 Bacteria 6858
62 Ga0068865_100000564 3300006881 Bacteria 20654
63 Ga0097620_100000383 3300006931 Bacteria 44155
64 Ga0097620_100019869 3300006931 Bacteria 6744
65 Ga0075435_100037256 3300007076 Bacteria 3871
66 Ga0099795_10000033 3300007788 Bacteria 36945
67 Ga0099795_10000454 3300007788 Bacteria 7566
68 Ga0105240_10011228 3300009093 Bacteria 12491
69 Ga0105240_10011589 3300009093 Bacteria 12268
70 Ga0105240_10011805 3300009093 Bacteria 12135
71 Ga0105240_10060177 3300009093 Unclassified 4735
72 Ga0105240_10091867 3300009093 Bacteria 3707
73 Ga0111539_10000511 3300009094 Bacteria 49322
74 Ga0111539_10042328 3300009094 Bacteria 5470
75 Ga0105245_10006154 3300009098 Bacteria 10561
76 Ga0105247_10000091 3300009101 Bacteria 97097
77 Ga0105247_10009502 3300009101 Bacteria 5899
78 Ga0105247_10015956 3300009101 Bacteria 4499
79 Ga0105248_10003800 3300009177 Bacteria 16739
80 Ga0105237_10027259 3300009545 Bacteria 5834
81 Ga0105238_10042697 3300009551 Bacteria 4590
82 Ga0105249_10004314 3300009553 Bacteria 12299
83 Ga0105249_10010896 3300009553 Bacteria 7991
84 Ga0099796_10000078 3300010159 Bacteria 16484
85 Ga0105239_10052608 3300010375 Bacteria 4466
86 Ga0157370_10004739 3300013104 Bacteria 15495
87 Ga0157372_10089979 3300013307 Bacteria 3488
88 Ga0157375_10005796 3300013308 Bacteria 10746
89 Ga0163163_10009419 3300014325 Bacteria 8721
90 Ga0213871_10000207 3300021441 Bacteria 6854
91 Ga0207682_10002578 3300025893 Bacteria 8086
92 Ga0207710_10000977 3300025900 Bacteria 15013
93 Ga0207680_10010411 3300025903 Bacteria 4650
94 Ga0207707_10000123 3300025912 Bacteria 80128
95 Ga0207707_10001227 3300025912 Bacteria 24068
96 Ga0207707_10003164 3300025912 Bacteria 14614
97 Ga0207695_10011147 3300025913 Bacteria 10908
98 Ga0207695_10012570 3300025913 Bacteria 10145
99 Ga0207695_10021944 3300025913 Bacteria 7266
100 Ga0207693_10001300 3300025915 Bacteria 22186
101 Ga0207660_10000263 3300025917 Bacteria 34361
102 Ga0207652_10003504 3300025921 Bacteria 12938
103 Ga0207659_10007521 3300025926 Bacteria 6707
104 Ga0207644_10003040 3300025931 Bacteria 10784
105 Ga0207670_10012214 3300025936 Bacteria 5016
106 Ga0207691_10022658 3300025940 Bacteria 5923
107 Ga0207691_10040485 3300025940 Bacteria 4304
108 Ga0207689_10016120 3300025942 Bacteria 6327
109 Ga0207689_10029363 3300025942 Bacteria 4593
110 Ga0207667_10007173 3300025949 Bacteria 13445
111 Ga0207667_10012571 3300025949 Bacteria 9739
112 Ga0207667_10062461 3300025949 Bacteria 3895
113 Ga0207712_10041814 3300025961 Unclassified 3152
114 Ga0207658_10000030 3300025986 Bacteria 168693
115 Ga0207658_10009873 3300025986 Bacteria 6484
116 Ga0207703_10001109 3300026035 Bacteria 25490
117 Ga0207703_10001953 3300026035 Bacteria 18224
118 Ga0207678_10030223 3300026067 Bacteria 4729
119 Ga0207641_10001308 3300026088 Bacteria 24636
120 Ga0207641_10006467 3300026088 Bacteria 9871
121 Ga0207648_10018813 3300026089 Bacteria 6244
122 Ga0207674_10035211 3300026116 Bacteria 5226
123 Ga0207675_100004776 3300026118 Bacteria 13057
124 Ga0207675_100010765 3300026118 Bacteria 8571
125 Ga0207675_100037396 3300026118 Bacteria 4527
126 Ga0207675_100053412 3300026118 Bacteria 3770
127 Ga0209179_1000087 3300027512 Bacteria 13978
128 Ga0268266_10001632 3300028379 Bacteria 26090
129 Ga0268266_10002701 3300028379 Bacteria 18613
130 Ga0268266_10009583 3300028379 Bacteria 8519
131 Ga0268266_10037362 3300028379 Bacteria 4138
132 Ga0268265_10008988 3300028380 Bacteria 6758
133 Ga0268264_10000102 3300028381 Bacteria 222526
134 Ga0307515_10007098 3300028794 Bacteria 22248
135 Ga0307511_10000165 3300030521 Bacteria 64541
136 Ga0265340_10005731 3300031247 Bacteria 6861
137 Ga0307509_10000005 3300031507 Bacteria 435959
138 Ga0307516_10000081 3300031730 Bacteria 105223
139 Ga0307409_100003273 3300031995 Bacteria 8744
140 Ga0307409_100023071 3300031995 Bacteria 4303
141 Ga0307411_10005554 3300032005 Bacteria 6207
142 Ga0307510_10000006 3300033180 Bacteria 566474
143 Ga0307510_10008242 3300033180 Bacteria 12415
144 Ga0373936_0001759 3300035113 Bacteria 7953
145 Ga0316574_0001880 3300035398 Bacteria 10272
146 Ga0316574_0007372 3300035398 Bacteria 6029
147 Ga0373937_0001221 3300036401 Bacteria 21622
148 Ga0395898_0002140 3300037466 Bacteria 24331
149 Ga0395898_0007308 3300037466 Bacteria 11726
150 Ga0436360_0340046 3300039438 Bacteria 9254
151 Ga0436363_1418826 3300039450 Bacteria 5843
152 Ga0451577_0030115 3300042876 Bacteria 4904
153 Ga0466969_0003410 3300044656 Bacteria 8453
154 Ga0466969_0003929 3300044656 Bacteria 7893
155 Ga0466966_0004406 3300044684 Bacteria 9287
156 Ga0466961_0003029 3300044693 Bacteria 10428
157 Ga0466964_0001614 3300044706 Bacteria 7782
158 Ga0466971_0003995 3300044719 Bacteria 6344
159 Ga0466970_0009216 3300044765 Bacteria 4980
160 Ga0466959_0002207 3300045049 Bacteria 12392
161 Ga0466959_0004150 3300045049 Bacteria 9649
162 Ga0495590_0003504 3300046457 Bacteria 6410
163 Ga0495638_0001970 3300046460 Bacteria 17599
164 Ga0495621_0001910 3300046539 Bacteria 5480
165 Ga0495671_0005724 3300046692 Bacteria 7243
166 Ga0496102_0005279 3300048905 Bacteria 10967
167 Ga0496107_0009088 3300048910 Bacteria 6889
168 Ga0496108_0047145 3300048911 Bacteria 3602
169 Ga0496109_0027304 3300048912 Bacteria 5095
170 Ga0496111_0004053 3300048914 Bacteria 9203
171 Ga0496117_0001472 3300048920 Bacteria 33857
172 Ga0496118_0000032 3300048921 Bacteria 330072
173 Ga0496119_0015294 3300048922 Bacteria 5924
174 Ga0496120_0001527 3300048923 Bacteria 27270
175 Ga0496121_0002879 3300048924 Bacteria 25347
176 Ga0496121_0034089 3300048924 Bacteria 4589
177 Ga0496124_0003989 3300048927 Bacteria 17589
178 Ga0496125_0000324 3300048928 Bacteria 92755
179 Ga0496125_0003633 3300048928 Bacteria 18500
180 Ga0496126_0011204 3300048929 Bacteria 9306
181 Ga0501031_0014551 3300049568 Bacteria 5117
182 Ga0501033_0018989 3300049570 Bacteria 5197
183 Ga0501036_0002417 3300049572 Bacteria 14614
184 Ga0501036_0034216 3300049572 Bacteria 4298
185 Ga0501038_0006901 3300049574 Bacteria 10488
186 Ga0501039_0000404 3300049575 Bacteria 31014
187 Ga0501039_0010546 3300049575 Bacteria 7042
188 Ga0501040_0002522 3300049576 Bacteria 11805
189 Ga0501040_0007346 3300049576 Bacteria 7136
190 Ga0501041_0000370 3300049577 Bacteria 22373
191 Ga0501042_0008706 3300049578 Bacteria 6729
192 Ga0501043_0039474 3300049579 Bacteria 3710
193 Ga0501046_0007124 3300049580 Bacteria 9840
194 Ga0501046_0027185 3300049580 Bacteria 4671
195 Ga0501048_0000642 3300049582 Bacteria 25078
196 Ga0501048_0035816 3300049582 Bacteria 3569
197 Ga0501067_0018997 3300049583 Bacteria 3803
198 Ga0501068_0000216 3300049584 Bacteria 27955
199 Ga0501070_0051206 3300049586 Bacteria 3428
200 Ga0501071_0000313 3300049587 Bacteria 23327
201 Ga0501071_0003227 3300049587 Bacteria 10165
202 Ga0501072_0000428 3300049588 Bacteria 30123
203 Ga0501073_0003942 3300049589 Bacteria 11132
204 Ga0501074_0000194 3300049590 Bacteria 33106
205 Ga0501076_0000343 3300049592 Bacteria 28658
206 Ga0501076_0006325 3300049592 Bacteria 8581
207 Ga0501076_0024870 3300049592 Bacteria 4632
208 Ga0501077_0000451 3300049593 Bacteria 24924
209 Ga0501077_0028090 3300049593 Bacteria 3575
210 Ga0501079_0000016 3300049741 Bacteria 65975
211 Ga0501079_0000531 3300049741 Bacteria 24816
212 Ga0501079_0038109 3300049741 Bacteria 3707
213 Ga0501080_0000344 3300049742 Bacteria 35777
214 Ga0501080_0000460 3300049742 Bacteria 31599
215 Ga0501080_0026084 3300049742 Bacteria 5429
216 Ga0501081_0000296 3300049743 Bacteria 26659
217 Ga0501081_0006840 3300049743 Bacteria 7417
218 Ga0501081_0014173 3300049743 Bacteria 5254
219 Ga0501035_0009188 3300049822 Bacteria 9191
220 Ga0501045_0000508 3300049824 Bacteria 24183
221 Ga0501045_0010561 3300049824 Bacteria 6467
222 nmdc:mga08y16_26082_c1 3300050511 Bacteria 6164
223 nmdc:mga0n895_744_c1 3300050512 Bacteria 23046
224 nmdc:mga0a205_103_c1 3300050515 Bacteria 48342
225 Ga0500556_0000146 3300053104 Bacteria 59309
226 Ga0500568_0010980 3300053139 Bacteria 4220
227 Ga0500588_0000828 3300053146 Bacteria 5380
228 Ga0500616_0000193 3300053153 Bacteria 100119
229 Ga0500616_0020632 3300053153 Bacteria 3700
230 Ga0500637_0014902 3300053178 Bacteria 4107
231 Ga0501084_0008340 3300054114 Bacteria 8552
232 Ga0501084_0042051 3300054114 Bacteria 3822
233 Ga0501082_0000339 3300060353 Bacteria 41308
234 Ga0501082_0000552 3300060353 Bacteria 33331
235 Ga0501082_0028064 3300060353 Bacteria 4849
236 Ga0466962_0001532 3300061719 Bacteria 10800
237 Ga0530510_0000878 3300061734 Bacteria 19814
238 Ga0530510_0019762 3300061734 Bacteria 4786

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009101 Ga0105247_10009502 Ga0105247_100095024 763
2 3300009093 Ga0105240_10091867 Ga0105240_100918672 904
3 3300026116 Ga0207674_10035211 Ga0207674_100352112 904
4 3300042876 Ga0451577_0030115 Ga0451577_0030115_190_2991 908
5 3300046692 Ga0495671_0005724 Ga0495671_0005724_2686_5619 911
6 3300028794 Ga0307515_10007098 Ga0307515_1000709816 913
7 3300031730 Ga0307516_10000081 Ga0307516_1000008184 913
8 3300048911 Ga0496108_0047145 Ga0496108_0047145_71_2821 913
9 3300007788 Ga0099795_10000454 Ga0099795_100004543 914
10 3300037466 Ga0395898_0002140 Ga0395898_0002140_16716_19511 917
11 3300049742 Ga0501080_0000460 Ga0501080_0000460_13324_16380 918
12 3300060353 Ga0501082_0000552 Ga0501082_0000552_2440_5496 918
13 3300005563 Ga0068855_100010648 Ga0068855_1000106483 919
14 3300009093 Ga0105240_10011228 Ga0105240_100112286 919
15 3300009093 Ga0105240_10011805 Ga0105240_100118054 919
16 3300009093 Ga0105240_10060177 Ga0105240_100601773 919
17 3300009545 Ga0105237_10027259 Ga0105237_100272594 919
18 3300044656 Ga0466969_0003410 Ga0466969_0003410_489_3248 919
19 3300045049 Ga0466959_0002207 Ga0466959_0002207_5874_8633 919
20 3300005344 Ga0070661_100023559 Ga0070661_1000235592 921
21 3300025940 Ga0207691_10022658 Ga0207691_100226583 921
22 3300032005 Ga0307411_10005554 Ga0307411_100055544 921
23 3300005458 Ga0070681_10033099 Ga0070681_100330993 922
24 3300005330 Ga0070690_100003308 Ga0070690_1000033083 924
25 3300005335 Ga0070666_10033076 Ga0070666_100330761 924
26 3300005354 Ga0070675_100001117 Ga0070675_10000111712 924
27 3300005367 Ga0070667_100017364 Ga0070667_1000173643 924
28 3300005434 Ga0070709_10010365 Ga0070709_100103653 924
29 3300005456 Ga0070678_100005367 Ga0070678_1000053673 924
30 3300005563 Ga0068855_100107716 Ga0068855_1001077161 924
31 3300006163 Ga0070715_10000254 Ga0070715_100002547 924
32 3300006173 Ga0070716_100001120 Ga0070716_1000011207 924
33 3300006175 Ga0070712_100000537 Ga0070712_10000053717 924
34 3300006844 Ga0075428_100003393 Ga0075428_1000033935 924
35 3300006881 Ga0068865_100000564 Ga0068865_10000056411 924
36 3300009094 Ga0111539_10000511 Ga0111539_100005118 924
37 3300009098 Ga0105245_10006154 Ga0105245_1000615410 924
38 3300013307 Ga0157372_10089979 Ga0157372_100899791 924
39 3300025915 Ga0207693_10001300 Ga0207693_1000130010 924
40 3300025926 Ga0207659_10007521 Ga0207659_100075212 924
41 3300037466 Ga0395898_0007308 Ga0395898_0007308_3130_5946 924
42 3300046460 Ga0495638_0001970 Ga0495638_0001970_13391_16261 924
43 3300048910 Ga0496107_0009088 Ga0496107_0009088_1773_4763 924
44 3300048912 Ga0496109_0027304 Ga0496109_0027304_162_3152 924
45 3300048914 Ga0496111_0004053 Ga0496111_0004053_1632_4622 924
46 3300005436 Ga0070713_100036355 Ga0070713_1000363552 925
47 3300031247 Ga0265340_10005731 Ga0265340_100057315 925
48 3300005458 Ga0070681_10020597 Ga0070681_100205975 926
49 3300005548 Ga0070665_100003990 Ga0070665_1000039908 926
50 3300005563 Ga0068855_100077279 Ga0068855_1000772791 926
51 3300006871 Ga0075434_100017768 Ga0075434_1000177684 926
52 3300007076 Ga0075435_100037256 Ga0075435_1000372562 926
53 3300025949 Ga0207667_10062461 Ga0207667_100624613 926
54 3300049570 Ga0501033_0018989 Ga0501033_0018989_2240_5161 926
55 3300050512 nmdc:mga0n895_744_c1 nmdc:mga0n895_744_c1_15328_18351 926
56 3300050515 nmdc:mga0a205_103_c1 nmdc:mga0a205_103_c1_33465_36488 926
57 3300009093 Ga0105240_10011589 Ga0105240_100115892 927
58 3300013104 Ga0157370_10004739 Ga0157370_100047399 927
59 3300035398 Ga0316574_0001880 Ga0316574_0001880_185_2983 928
60 3300035398 Ga0316574_0007372 Ga0316574_0007372_2829_5627 928
61 3300031995 Ga0307409_100003273 Ga0307409_1000032734 929
62 3300044656 Ga0466969_0003929 Ga0466969_0003929_2818_5754 929
63 3300044684 Ga0466966_0004406 Ga0466966_0004406_3677_6613 929
64 3300044693 Ga0466961_0003029 Ga0466961_0003029_4152_7088 929
65 3300044706 Ga0466964_0001614 Ga0466964_0001614_2843_5779 929
66 3300044719 Ga0466971_0003995 Ga0466971_0003995_2141_5077 929
67 3300044765 Ga0466970_0009216 Ga0466970_0009216_1853_4789 929
68 3300045049 Ga0466959_0004150 Ga0466959_0004150_2818_5754 929
69 3300061719 Ga0466962_0001532 Ga0466962_0001532_4746_7682 929
70 3300005546 Ga0070696_100000845 Ga0070696_1000008452 930
71 3300035113 Ga0373936_0001759 Ga0373936_0001759_4366_7263 930
72 3300049568 Ga0501031_0014551 Ga0501031_0014551_1992_4958 930
73 3300049572 Ga0501036_0002417 Ga0501036_0002417_10229_13195 930
74 3300049574 Ga0501038_0006901 Ga0501038_0006901_2935_5901 930
75 3300049575 Ga0501039_0000404 Ga0501039_0000404_7404_10370 930
76 3300049576 Ga0501040_0007346 Ga0501040_0007346_3601_6567 930
77 3300049577 Ga0501041_0000370 Ga0501041_0000370_3696_6662 930
78 3300049580 Ga0501046_0007124 Ga0501046_0007124_2483_5449 930
79 3300049582 Ga0501048_0000642 Ga0501048_0000642_14506_17472 930
80 3300049587 Ga0501071_0000313 Ga0501071_0000313_4604_7570 930
81 3300049588 Ga0501072_0000428 Ga0501072_0000428_7229_10195 930
82 3300049592 Ga0501076_0000343 Ga0501076_0000343_19544_22510 930
83 3300049593 Ga0501077_0000451 Ga0501077_0000451_21711_24677 930
84 3300049741 Ga0501079_0000531 Ga0501079_0000531_7647_10613 930
85 3300049742 Ga0501080_0000344 Ga0501080_0000344_4582_7548 930
86 3300049743 Ga0501081_0000296 Ga0501081_0000296_7359_10325 930
87 3300049822 Ga0501035_0009188 Ga0501035_0009188_755_3721 930
88 3300049824 Ga0501045_0000508 Ga0501045_0000508_14534_17500 930
89 3300053153 Ga0500616_0020632 Ga0500616_0020632_744_3635 930
90 3300060353 Ga0501082_0000339 Ga0501082_0000339_24013_26979 930
91 3300061734 Ga0530510_0000878 Ga0530510_0000878_9251_12217 930
92 3300005438 Ga0070701_10004265 Ga0070701_100042653 931
93 3300005444 Ga0070694_100014956 Ga0070694_1000149563 931
94 3300005518 Ga0070699_100032237 Ga0070699_1000322373 931
95 3300005544 Ga0070686_100006098 Ga0070686_1000060984 931
96 3300005841 Ga0068863_100024915 Ga0068863_1000249153 931
97 3300021441 Ga0213871_10000207 Ga0213871_100002072 931
98 3300025936 Ga0207670_10012214 Ga0207670_100122144 931
99 3300026118 Ga0207675_100010765 Ga0207675_1000107658 931
100 3300028380 Ga0268265_10008988 Ga0268265_100089885 931
101 3300039438 Ga0436360_0340046 Ga0436360_0340046_1254_4250 931
102 3300006237 Ga0097621_100031920 Ga0097621_1000319202 932
103 3300006358 Ga0068871_100006446 Ga0068871_1000064467 932
104 3300005719 Ga0068861_100001342 Ga0068861_1000013425 933
105 3300026118 Ga0207675_100004776 Ga0207675_1000047765 933
106 3300005937 Ga0081455_10000192 Ga0081455_1000019230 934
107 3300007788 Ga0099795_10000033 Ga0099795_1000003318 934
108 3300010159 Ga0099796_10000078 Ga0099796_100000788 934
109 3300027512 Ga0209179_1000087 Ga0209179_10000877 934
110 3300046457 Ga0495590_0003504 Ga0495590_0003504_3087_5960 934
111 3300049743 Ga0501081_0006840 Ga0501081_0006840_1091_4093 934
112 3300005458 Ga0070681_10018155 Ga0070681_100181554 935
113 3300005548 Ga0070665_100002652 Ga0070665_1000026527 935
114 3300025912 Ga0207707_10003164 Ga0207707_1000316412 935
115 3300028379 Ga0268266_10001632 Ga0268266_100016328 935
116 3300005985 Ga0081539_10000011 Ga0081539_10000011260 936
117 3300049572 Ga0501036_0034216 Ga0501036_0034216_454_3411 937
118 3300049575 Ga0501039_0010546 Ga0501039_0010546_2654_5611 937
119 3300049576 Ga0501040_0002522 Ga0501040_0002522_2342_5299 937
120 3300049578 Ga0501042_0008706 Ga0501042_0008706_63_3020 937
121 3300049579 Ga0501043_0039474 Ga0501043_0039474_487_3444 937
122 3300049580 Ga0501046_0027185 Ga0501046_0027185_1636_4593 937
123 3300049582 Ga0501048_0035816 Ga0501048_0035816_65_3022 937
124 3300049587 Ga0501071_0003227 Ga0501071_0003227_457_3414 937
125 3300049592 Ga0501076_0006325 Ga0501076_0006325_1646_4603 937
126 3300049593 Ga0501077_0028090 Ga0501077_0028090_179_3136 937
127 3300049741 Ga0501079_0038109 Ga0501079_0038109_458_3415 937
128 3300049742 Ga0501080_0026084 Ga0501080_0026084_167_3124 937
129 3300049743 Ga0501081_0014173 Ga0501081_0014173_574_3531 937
130 3300049824 Ga0501045_0010561 Ga0501045_0010561_3406_6363 937
131 3300054114 Ga0501084_0042051 Ga0501084_0042051_410_3367 937
132 3300061734 Ga0530510_0019762 Ga0530510_0019762_1371_4328 937
133 3300005289 Ga0065704_10000527 Ga0065704_1000052717 938
134 3300005937 Ga0081455_10013788 Ga0081455_100137886 938
135 3300053178 Ga0500637_0014902 Ga0500637_0014902_74_2932 938
136 3300036401 Ga0373937_0001221 Ga0373937_0001221_7710_10679 939
137 3300039450 Ga0436363_1418826 Ga0436363_1418826_1262_4201 940
138 3300031995 Ga0307409_100023071 Ga0307409_1000230712 942
139 3300049583 Ga0501067_0018997 Ga0501067_0018997_616_3471 942
140 3300049584 Ga0501068_0000216 Ga0501068_0000216_11934_14789 942
141 3300049586 Ga0501070_0051206 Ga0501070_0051206_465_3320 942
142 3300049589 Ga0501073_0003942 Ga0501073_0003942_7971_10826 942
143 3300049590 Ga0501074_0000194 Ga0501074_0000194_654_3509 942
144 3300049592 Ga0501076_0024870 Ga0501076_0024870_702_3557 942
145 3300049741 Ga0501079_0000016 Ga0501079_0000016_1077_3932 942
146 3300054114 Ga0501084_0008340 Ga0501084_0008340_679_3534 942
147 3300060353 Ga0501082_0028064 Ga0501082_0028064_1024_3879 942
148 3300005295 Ga0065707_10082074 Ga0065707_1008207425 943
149 3300013308 Ga0157375_10005796 Ga0157375_100057962 943
150 3300009094 Ga0111539_10042328 Ga0111539_100423283 944
151 3300050511 nmdc:mga08y16_26082_c1 nmdc:mga08y16_26082_c1_1711_4572 944
152 3300053146 Ga0500588_0000828 Ga0500588_0000828_1950_4943 944
153 3300053153 Ga0500616_0000193 Ga0500616_0000193_2116_5037 944
154 3300005334 Ga0068869_100040431 Ga0068869_1000404312 946
155 3300005355 Ga0070671_100000899 Ga0070671_10000089910 946
156 3300005367 Ga0070667_100003854 Ga0070667_1000038543 946
157 3300005458 Ga0070681_10003020 Ga0070681_1000302011 946
158 3300005530 Ga0070679_100070127 Ga0070679_1000701272 946
159 3300005548 Ga0070665_100020822 Ga0070665_1000208225 946
160 3300005617 Ga0068859_100000383 Ga0068859_10000038332 946
161 3300005841 Ga0068863_100002072 Ga0068863_10000207212 946
162 3300005842 Ga0068858_100000780 Ga0068858_10000078020 946
163 3300006931 Ga0097620_100000383 Ga0097620_10000038332 946
164 3300009101 Ga0105247_10000091 Ga0105247_1000009171 946
165 3300009553 Ga0105249_10004314 Ga0105249_1000431412 946
166 3300014325 Ga0163163_10009419 Ga0163163_100094197 946
167 3300025900 Ga0207710_10000977 Ga0207710_100009776 946
168 3300025931 Ga0207644_10003040 Ga0207644_100030407 946
169 3300025942 Ga0207689_10029363 Ga0207689_100293633 946
170 3300025986 Ga0207658_10009873 Ga0207658_100098734 946
171 3300026035 Ga0207703_10001953 Ga0207703_100019539 946
172 3300026088 Ga0207641_10006467 Ga0207641_100064676 946
173 3300028379 Ga0268266_10037362 Ga0268266_100373623 946
174 3300046539 Ga0495621_0001910 Ga0495621_0001910_1695_4574 946
175 3300048924 Ga0496121_0002879 Ga0496121_0002879_14745_17696 946
176 3300048928 Ga0496125_0003633 Ga0496125_0003633_7439_10390 946
177 3300005354 Ga0070675_100009337 Ga0070675_1000093372 947
178 3300009177 Ga0105248_10003800 Ga0105248_100038003 947
179 3300025893 Ga0207682_10002578 Ga0207682_100025784 947
180 3300025940 Ga0207691_10040485 Ga0207691_100404852 947
181 3300025942 Ga0207689_10016120 Ga0207689_100161204 947
182 3300026089 Ga0207648_10018813 Ga0207648_100188135 947
183 3300026118 Ga0207675_100053412 Ga0207675_1000534122 947
184 3300025913 Ga0207695_10012570 Ga0207695_100125703 948
185 3300026118 Ga0207675_100037396 Ga0207675_1000373962 948
186 3300005367 Ga0070667_100000008 Ga0070667_10000000827 949
187 3300005458 Ga0070681_10001920 Ga0070681_100019201 949
188 3300005530 Ga0070679_100047006 Ga0070679_1000470062 949
189 3300025903 Ga0207680_10010411 Ga0207680_100104113 949
190 3300025912 Ga0207707_10001227 Ga0207707_1000122712 949
191 3300025986 Ga0207658_10000030 Ga0207658_10000030141 949
192 3300053139 Ga0500568_0010980 Ga0500568_0010980_1275_4160 949
193 3300053104 Ga0500556_0000146 Ga0500556_0000146_43466_46441 950
194 3300033180 Ga0307510_10008242 Ga0307510_100082426 953
195 3300010375 Ga0105239_10052608 Ga0105239_100526082 954
196 3300005530 Ga0070679_100040065 Ga0070679_1000400653 955
197 3300005548 Ga0070665_100016773 Ga0070665_1000167734 956
198 3300009101 Ga0105247_10015956 Ga0105247_100159562 956
199 3300026035 Ga0207703_10001109 Ga0207703_1000110911 956
200 3300031507 Ga0307509_10000005 Ga0307509_10000005351 956
201 3300048924 Ga0496121_0034089 Ga0496121_0034089_999_3947 956
202 3300048928 Ga0496125_0000324 Ga0496125_0000324_40251_43199 956
203 3300005617 Ga0068859_100019869 Ga0068859_1000198693 957
204 3300005841 Ga0068863_100023721 Ga0068863_1000237213 957
205 3300005843 Ga0068860_100001612 Ga0068860_1000016126 957
206 3300006931 Ga0097620_100019869 Ga0097620_1000198694 957
207 3300026067 Ga0207678_10030223 Ga0207678_100302232 957
208 3300026088 Ga0207641_10001308 Ga0207641_1000130825 957
209 3300028381 Ga0268264_10000102 Ga0268264_1000010290 957
210 3300030521 Ga0307511_10000165 Ga0307511_1000016510 957
211 3300033180 Ga0307510_10000006 Ga0307510_10000006421 957
212 3300005336 Ga0070680_100000542 Ga0070680_10000054216 958
213 3300005458 Ga0070681_10005296 Ga0070681_1000529610 958
214 3300005530 Ga0070679_100000441 Ga0070679_10000044120 958
215 3300005563 Ga0068855_100023190 Ga0068855_1000231907 958
216 3300025912 Ga0207707_10000123 Ga0207707_1000012358 958
217 3300025913 Ga0207695_10011147 Ga0207695_100111477 958
218 3300025917 Ga0207660_10000263 Ga0207660_1000026311 958
219 3300025921 Ga0207652_10003504 Ga0207652_1000350410 958
220 3300025949 Ga0207667_10012571 Ga0207667_100125712 958
221 3300048923 Ga0496120_0001527 Ga0496120_0001527_3738_6683 958
222 3300025913 Ga0207695_10021944 Ga0207695_100219444 959
223 3300025949 Ga0207667_10007173 Ga0207667_100071739 959
224 3300005548 Ga0070665_100009538 Ga0070665_1000095387 966
225 3300005844 Ga0068862_100039321 Ga0068862_1000393212 966
226 3300009551 Ga0105238_10042697 Ga0105238_100426972 966
227 3300009553 Ga0105249_10010896 Ga0105249_100108962 966
228 3300025961 Ga0207712_10041814 Ga0207712_100418142 966
229 3300028379 Ga0268266_10002701 Ga0268266_1000270111 966
230 3300048905 Ga0496102_0005279 Ga0496102_0005279_6115_9060 966
231 3300048920 Ga0496117_0001472 Ga0496117_0001472_12840_15785 966
232 3300048921 Ga0496118_0000032 Ga0496118_0000032_309135_312080 966
233 3300048922 Ga0496119_0015294 Ga0496119_0015294_2040_4985 966
234 3300048927 Ga0496124_0003989 Ga0496124_0003989_5741_8686 966
235 3300048929 Ga0496126_0011204 Ga0496126_0011204_3405_6350 966
236 3300003322 rootL2_10001709 rootL2_100017093 967
237 3300005548 Ga0070665_100022841 Ga0070665_1000228412 967
238 3300028379 Ga0268266_10009583 Ga0268266_100095836 967

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17820

PDZ_6

PDZ domain

333

385

0.98

PF12812

PDZ_1

PDZ-like domain

401

477

0.96

PF13365

Trypsin_2

Trypsin-like peptidase domain

113

259

0.88

PF12812

PDZ_1

PDZ-like domain

866

942

0.87

PF00595

PDZ

PDZ domain

304

384

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
3i1e-assembly2.cif.gz_B crystal structure of the pdz domain of the sdrc-like protein (lin2157) from listeria innocua, northeast structural genomics consortium target lkr136c 0.9088 314 376
2kl1-assembly1.cif.gz_A solution structure of gtr34c from geobacillus thermodenitrificans. northeast structural genomics consortium target gtr34c 0.9083 314 378
3i18-assembly1.cif.gz_A crystal structure of the pdz domain of the sdrc-like protein (lmo2051) from listeria monocytogenes, northeast structural genomics consortium target lmr166b 0.9014 314 374
7cqd-assembly2.cif.gz_B the nz-1 fab complexed with the pdz tandem fragment of a. aeolicus s2p homolog with the pa14 tag inserted between the residues 235 and 236 0.8934 314 375
2zpm-assembly1.cif.gz_A crystal structure analysis of pdz domain b 0.8848 314 376
ID Description Score Start End Superfamily
af_Q9P7S1_280_374_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9926 291 382 2.30.42.10
af_A0A1D8PCD2_285_377_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9861 291 383 2.30.42.10
af_A0A0P0VNU6_285_398_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9861 274 382 2.30.42.10
af_A0A1D8PCD2_285_377_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9757 291 383 2.30.42.10
af_A0A0R0HTR5_280_372_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9703 291 381 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A6H5L7H7-F1-model_v4 Uncharacterized protein 0.9931 270 378
AF-A0A7Y1TYE1-F1-model_v4 Pro-apoptotic serine protease NMA111 (Pro-apoptotic serine protease nma111) 0.9894 280 965
AF-A0A7Y1TYE1-F1-model_v4 Pro-apoptotic serine protease NMA111 (Pro-apoptotic serine protease nma111) 0.9837 280 965
AF-A0A382BRU4-F1-model_v4 PDZ domain-containing protein 0.983 410 967
AF-A0A382BRU4-F1-model_v4 PDZ domain-containing protein 0.9813 410 967

Feature Viewer

pLDDT pTM Quality
81.11 0.74 High
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Predicted Structure (AlphaFold2)

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