F350439
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 237 | 177 | 474 | 462 |
Family's Representative Sequence
| Representative Sequence | 3300053086|Ga0500578_0064765|Ga0500578_0064765_613_2148 |
| Length | 511 |
| Sequence | MGDASRKPLKKRLFRALPGWRNVPGDFQFDSPARVCFLSVSRAAGYRMHGIFRWSSKWWPGLVPLAIFWAIAAWTSTAPLEADLAGRANASLKDTILDKPRIAVAGRDVTFSADAFSEDGRRSSVASVEAVPGVRLVHDETRLVVEAKPFVWSAERDVVRVTLGGATPLPASKSRLLEAARAALGGVEVVDRMGLARGAPPRFDAAALLLIDQVGKLKDGKITISDATVSLSGMARELGGREAIAAALKNLPEGFSVATNEVKAPPYIFQANKDPVAVTLTLTGYVPDNNVHAALATVAGRKFFNEKVIDNLKASVGASSGFTNAVTRALGALSRLSTGSLIVSDREIRLSGDALYDAAAGQIRASLAKDLPQGWTAKAEISVKPAAAPVDATVCQQLFADLLGKGKIRFESGGANIDPDSAGLLDRLVEIALRCPAASIEIAGHTDADGEDGFNQVLSEKRAEAVVDYLVKAGLPADRFKAVGYGSTQPVATNDTNEGKAQNRRIDFMVR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 2 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 3 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 4 | 3300003659 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 5 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 13 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 14 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 16 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 17 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 18 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 19 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 20 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 21 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 22 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 23 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 27 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 36 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 37 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 38 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 40 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 41 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 64 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 65 | 3300028654 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG | Metagenome | Rhizosphere |
| 66 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 67 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 68 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 69 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 70 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 71 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 72 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 73 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 74 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 75 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 76 | 3300033442 | Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 | Metagenome | Nodule |
| 77 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 78 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 79 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 80 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 81 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 82 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 83 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 84 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 85 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 86 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 87 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 88 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 89 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 90 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 91 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 92 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 93 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 94 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 95 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 96 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 116 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 117 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 118 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 119 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 120 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 121 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 122 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 123 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 124 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 125 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 126 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 127 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 135 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 137 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 138 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 139 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 140 | 3300053095 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere | Metagenome | Endosphere |
| 141 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 142 | 3300053098 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere | Metagenome | Endosphere |
| 143 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 144 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 145 | 3300053115 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 endosphere | Metagenome | Endosphere |
| 146 | 3300053116 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere | Metagenome | Endosphere |
| 147 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 148 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 149 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
| 150 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 151 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 152 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 153 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 154 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 155 | 3300053145 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere | Metagenome | Endosphere |
| 156 | 3300053150 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere | Metagenome | Endosphere |
| 157 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 158 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 159 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 160 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
| 161 | 3300053159 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere | Metagenome | Endosphere |
| 162 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
| 163 | 3300053162 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere | Metagenome | Endosphere |
| 164 | 3300053163 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere | Metagenome | Endosphere |
| 165 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 166 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 167 | 3300053723 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere | Metagenome | Endosphere |
| 168 | 3300053731 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere | Metagenome | Endosphere |
| 169 | 2513237137 | Bradyrhizobium elkanii USDA 94 | Isolate | Nodule |
| 170 | 2602042107 | Bradyrhizobium sp. NFR13 | Isolate | Rhizoplane |
| 171 | 2643221651 | Afipia sp. Root123D2 | Isolate | Unclassified |
| 172 | 2857524615 | Tardiphaga sp. R-73074 | Isolate | Unclassified |
| 173 | 2893066018 | Tardiphaga sp. P9-11 | Isolate | Unclassified |
| 174 | 2906610324 | |||
| 175 | 2906635258 | Bradyrhizobium sp. USDA 3458 | Isolate | Unclassified |
| 176 | 2919073203 | Tardiphaga robiniae 1155 | Isolate | Unclassified |
| 177 | 8006964411 | Bradyrhizobium sp. sBnM-33 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.61 |
| Metatranscriptomes | 0 |
| Isolates | 3.39 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 22.36 |
| Nodule | 1.27 |
| Rhizoplane | 1.69 |
| Rhizosphere | 58.65 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0500578_0064765 | 3300053086 | Bacteria | 2331 |
| 2 | JGI25406J46586_10000059 | 3300003203 | Bacteria | 50077 |
| 3 | JGI25153J46596_10028975 | 3300003215 | Bacteria | 1909 |
| 4 | JGI25404J52841_10002530 | 3300003659 | Bacteria | 3476 |
| 5 | Ga0070680_100097284 | 3300005336 | Bacteria | 2441 |
| 6 | Ga0070659_100047798 | 3300005366 | Bacteria | 3359 |
| 7 | Ga0070667_100068209 | 3300005367 | Bacteria | 3026 |
| 8 | Ga0070714_100013408 | 3300005435 | Bacteria | 6569 |
| 9 | Ga0070714_100046782 | 3300005435 | Bacteria | 3672 |
| 10 | Ga0070713_100000783 | 3300005436 | Bacteria | 20312 |
| 11 | Ga0070713_100013634 | 3300005436 | Bacteria | 6010 |
| 12 | Ga0070711_100017040 | 3300005439 | Bacteria | 4620 |
| 13 | Ga0070711_100053103 | 3300005439 | Bacteria | 2791 |
| 14 | Ga0070681_10046420 | 3300005458 | Bacteria | 4343 |
| 15 | Ga0070681_10057555 | 3300005458 | Bacteria | 3868 |
| 16 | Ga0070679_100016804 | 3300005530 | Bacteria | 7071 |
| 17 | Ga0070684_100004411 | 3300005535 | Bacteria | 10711 |
| 18 | Ga0070693_100067864 | 3300005547 | Bacteria | 2092 |
| 19 | Ga0068855_100020258 | 3300005563 | Bacteria | 7983 |
| 20 | Ga0068857_100142331 | 3300005577 | Bacteria | 2168 |
| 21 | Ga0068856_100030198 | 3300005614 | Bacteria | 5298 |
| 22 | Ga0068852_100030772 | 3300005616 | Bacteria | 4423 |
| 23 | Ga0081455_10000607 | 3300005937 | Bacteria | 46359 |
| 24 | Ga0081455_10007126 | 3300005937 | Bacteria | 11839 |
| 25 | Ga0081455_10009288 | 3300005937 | Bacteria | 10126 |
| 26 | Ga0081455_10025258 | 3300005937 | Bacteria | 5488 |
| 27 | Ga0081455_10079055 | 3300005937 | Bacteria | 2701 |
| 28 | Ga0081540_1002088 | 3300005983 | Bacteria | 16651 |
| 29 | Ga0081540_1010965 | 3300005983 | Bacteria | 6088 |
| 30 | Ga0081540_1055194 | 3300005983 | Bacteria | 1936 |
| 31 | Ga0081539_10000324 | 3300005985 | Bacteria | 106549 |
| 32 | Ga0081539_10000466 | 3300005985 | Bacteria | 85716 |
| 33 | Ga0081539_10021741 | 3300005985 | Bacteria | 4272 |
| 34 | Ga0075365_10002287 | 3300006038 | Bacteria | 9308 |
| 35 | Ga0075365_10137832 | 3300006038 | Bacteria | 1692 |
| 36 | Ga0075365_10172427 | 3300006038 | Bacteria | 1510 |
| 37 | Ga0070715_10000304 | 3300006163 | Bacteria | 12095 |
| 38 | Ga0070716_100024879 | 3300006173 | Bacteria | 3188 |
| 39 | Ga0070716_100048162 | 3300006173 | Bacteria | 2408 |
| 40 | Ga0070712_100008208 | 3300006175 | Bacteria | 6559 |
| 41 | Ga0075362_10013029 | 3300006177 | Bacteria | 3318 |
| 42 | Ga0105245_10163662 | 3300009098 | Bacteria | 2113 |
| 43 | Ga0105245_10271751 | 3300009098 | Bacteria | 1653 |
| 44 | Ga0105237_10010423 | 3300009545 | Bacteria | 9887 |
| 45 | Ga0105237_10041555 | 3300009545 | Bacteria | 4637 |
| 46 | Ga0105238_10041809 | 3300009551 | Bacteria | 4642 |
| 47 | Ga0105238_10048402 | 3300009551 | Bacteria | 4285 |
| 48 | Ga0105238_10056572 | 3300009551 | Bacteria | 3935 |
| 49 | Ga0105239_10034235 | 3300010375 | Bacteria | 5577 |
| 50 | Ga0105239_10116305 | 3300010375 | Bacteria | 2967 |
| 51 | Ga0157373_10028426 | 3300013100 | Bacteria | 4033 |
| 52 | Ga0157369_10007714 | 3300013105 | Bacteria | 12380 |
| 53 | Ga0157374_10020275 | 3300013296 | Bacteria | 5896 |
| 54 | Ga0163162_10159155 | 3300013306 | Bacteria | 2379 |
| 55 | Ga0213876_10000964 | 3300021384 | Bacteria | 18933 |
| 56 | Ga0209677_100606 | 3300025253 | Bacteria | 19282 |
| 57 | Ga0209233_1005236 | 3300025261 | Bacteria | 4328 |
| 58 | Ga0209455_1002406 | 3300025272 | Bacteria | 7250 |
| 59 | Ga0209455_1003169 | 3300025272 | Bacteria | 5978 |
| 60 | Ga0209564_1000747 | 3300025295 | Bacteria | 46025 |
| 61 | Ga0209564_1008058 | 3300025295 | Bacteria | 5278 |
| 62 | Ga0209758_1001618 | 3300025297 | Bacteria | 25654 |
| 63 | Ga0207692_10000602 | 3300025898 | Bacteria | 12738 |
| 64 | Ga0207692_10047723 | 3300025898 | Bacteria | 2152 |
| 65 | Ga0207647_10095596 | 3300025904 | Bacteria | 1769 |
| 66 | Ga0207685_10008675 | 3300025905 | Bacteria | 2911 |
| 67 | Ga0207699_10009417 | 3300025906 | Bacteria | 4863 |
| 68 | Ga0207699_10031834 | 3300025906 | Bacteria | 2965 |
| 69 | Ga0207707_10008369 | 3300025912 | Bacteria | 8976 |
| 70 | Ga0207707_10063297 | 3300025912 | Bacteria | 3219 |
| 71 | Ga0207671_10019685 | 3300025914 | Bacteria | 5155 |
| 72 | Ga0207693_10009646 | 3300025915 | Bacteria | 7861 |
| 73 | Ga0207693_10055835 | 3300025915 | Bacteria | 3098 |
| 74 | Ga0207663_10010758 | 3300025916 | Bacteria | 4885 |
| 75 | Ga0207663_10012354 | 3300025916 | Bacteria | 4615 |
| 76 | Ga0207660_10092487 | 3300025917 | Bacteria | 2245 |
| 77 | Ga0207657_10001638 | 3300025919 | Bacteria | 24126 |
| 78 | Ga0207652_10052321 | 3300025921 | Bacteria | 3504 |
| 79 | Ga0207652_10217804 | 3300025921 | Bacteria | 1720 |
| 80 | Ga0207646_10070296 | 3300025922 | Bacteria | 3126 |
| 81 | Ga0207700_10047738 | 3300025928 | Bacteria | 3175 |
| 82 | Ga0207700_10167804 | 3300025928 | Bacteria | 1828 |
| 83 | Ga0207664_10009883 | 3300025929 | Bacteria | 6718 |
| 84 | Ga0207690_10128865 | 3300025932 | Bacteria | 1849 |
| 85 | Ga0207665_10000913 | 3300025939 | Bacteria | 19947 |
| 86 | Ga0207661_10055988 | 3300025944 | Bacteria | 3164 |
| 87 | Ga0207667_10076427 | 3300025949 | Bacteria | 3475 |
| 88 | Ga0207667_10158570 | 3300025949 | Bacteria | 2328 |
| 89 | Ga0207678_10003737 | 3300026067 | Bacteria | 13694 |
| 90 | Ga0207648_10076280 | 3300026089 | Bacteria | 2922 |
| 91 | Ga0207674_10088488 | 3300026116 | Bacteria | 3090 |
| 92 | Ga0268264_10000049 | 3300028381 | Bacteria | 329992 |
| 93 | Ga0265319_1012956 | 3300028563 | Bacteria | 3343 |
| 94 | Ga0265323_10002671 | 3300028653 | Bacteria | 8055 |
| 95 | Ga0265322_10016191 | 3300028654 | Bacteria | 2152 |
| 96 | Ga0265336_10001470 | 3300028666 | Bacteria | 10706 |
| 97 | Ga0307515_10126988 | 3300028794 | Bacteria | 2840 |
| 98 | Ga0265338_10000024 | 3300028800 | Bacteria | 297778 |
| 99 | Ga0307511_10062035 | 3300030521 | Bacteria | 2842 |
| 100 | Ga0265339_10000531 | 3300031249 | Bacteria | 29760 |
| 101 | Ga0307509_10095462 | 3300031507 | Bacteria | 3028 |
| 102 | Ga0265342_10006737 | 3300031712 | Bacteria | 8511 |
| 103 | Ga0307516_10073373 | 3300031730 | Bacteria | 3279 |
| 104 | Ga0307412_10047676 | 3300031911 | Bacteria | 2815 |
| 105 | Ga0307507_10013954 | 3300033179 | Bacteria | 9662 |
| 106 | Ga0315911_1000076 | 3300033442 | Bacteria | 14517 |
| 107 | Ga0373923_0026450 | 3300035111 | Bacteria | 2308 |
| 108 | Ga0373953_0009816 | 3300035117 | Bacteria | 3311 |
| 109 | Ga0373943_0010390 | 3300035170 | Bacteria | 4172 |
| 110 | Ga0373943_0092164 | 3300035170 | Bacteria | 1571 |
| 111 | Ga0373931_0050404 | 3300035691 | Bacteria | 2215 |
| 112 | Ga0373935_0082287 | 3300035692 | Bacteria | 2094 |
| 113 | Ga0373927_0006790 | 3300035695 | Bacteria | 7786 |
| 114 | Ga0373927_0097092 | 3300035695 | Bacteria | 1915 |
| 115 | Ga0373933_0010138 | 3300035724 | Bacteria | 5159 |
| 116 | Ga0373947_0050236 | 3300035725 | Bacteria | 2507 |
| 117 | Ga0373947_0059325 | 3300035725 | Bacteria | 2320 |
| 118 | Ga0373937_0165365 | 3300036401 | Bacteria | 2074 |
| 119 | Ga0373925_0054453 | 3300037068 | Bacteria | 2993 |
| 120 | Ga0373925_0087339 | 3300037068 | Bacteria | 2380 |
| 121 | Ga0395900_0001229 | 3300037418 | Bacteria | 31478 |
| 122 | Ga0395898_0017347 | 3300037466 | Bacteria | 7354 |
| 123 | Ga0395905_0018502 | 3300037471 | Bacteria | 6613 |
| 124 | Ga0395901_0145291 | 3300038443 | Bacteria | 2493 |
| 125 | Ga0395901_0207141 | 3300038443 | Bacteria | 2054 |
| 126 | Ga0436365_0184625 | 3300039437 | Bacteria | 24233 |
| 127 | Ga0436361_0156582 | 3300039447 | Bacteria | 2112 |
| 128 | Ga0436361_0626869 | 3300039447 | Bacteria | 4390 |
| 129 | Ga0466963_0031196 | 3300044694 | Bacteria | 3444 |
| 130 | Ga0466959_0057082 | 3300045049 | Bacteria | 2847 |
| 131 | Ga0466967_0016952 | 3300045976 | Bacteria | 5763 |
| 132 | Ga0495592_0061052 | 3300046454 | Bacteria | 2771 |
| 133 | Ga0495651_0057390 | 3300046462 | Bacteria | 2989 |
| 134 | Ga0495580_0009093 | 3300046472 | Bacteria | 7836 |
| 135 | Ga0495639_0037289 | 3300046475 | Bacteria | 2178 |
| 136 | Ga0495664_0004571 | 3300046477 | Bacteria | 7571 |
| 137 | Ga0495606_0000244 | 3300046507 | Bacteria | 95942 |
| 138 | Ga0495606_0059607 | 3300046507 | Bacteria | 2448 |
| 139 | Ga0495618_0097179 | 3300046514 | Bacteria | 1884 |
| 140 | Ga0495648_0002889 | 3300046524 | Bacteria | 15455 |
| 141 | Ga0495652_0060140 | 3300046529 | Bacteria | 3212 |
| 142 | Ga0495665_0023543 | 3300046531 | Bacteria | 3308 |
| 143 | Ga0495656_0070288 | 3300046615 | Bacteria | 1553 |
| 144 | Ga0495634_0024947 | 3300046642 | Bacteria | 4190 |
| 145 | Ga0495646_0025619 | 3300046680 | Bacteria | 3710 |
| 146 | Ga0495647_0010696 | 3300046681 | Bacteria | 3129 |
| 147 | Ga0495658_0052399 | 3300046683 | Bacteria | 2314 |
| 148 | Ga0495613_0044028 | 3300046689 | Bacteria | 3303 |
| 149 | Ga0495624_0016697 | 3300046690 | Bacteria | 4942 |
| 150 | Ga0495686_0011347 | 3300047472 | Bacteria | 6281 |
| 151 | Ga0495593_0063791 | 3300047673 | Bacteria | 1923 |
| 152 | Ga0496106_0000713 | 3300048909 | Bacteria | 23943 |
| 153 | Ga0496112_0000019 | 3300048915 | Bacteria | 185531 |
| 154 | Ga0496115_0016822 | 3300048918 | Bacteria | 5576 |
| 155 | Ga0496116_0004642 | 3300048919 | Bacteria | 13010 |
| 156 | Ga0496118_0005960 | 3300048921 | Bacteria | 13608 |
| 157 | Ga0496118_0051934 | 3300048921 | Bacteria | 3132 |
| 158 | Ga0496119_0119080 | 3300048922 | Bacteria | 1454 |
| 159 | Ga0496121_0000261 | 3300048924 | Bacteria | 110085 |
| 160 | Ga0496121_0002241 | 3300048924 | Bacteria | 30145 |
| 161 | Ga0496121_0003208 | 3300048924 | Bacteria | 23541 |
| 162 | Ga0496121_0009971 | 3300048924 | Bacteria | 10803 |
| 163 | Ga0496121_0020513 | 3300048924 | Bacteria | 6535 |
| 164 | Ga0496121_0024127 | 3300048924 | Bacteria | 5826 |
| 165 | Ga0496121_0028316 | 3300048924 | Bacteria | 5219 |
| 166 | Ga0496121_0049136 | 3300048924 | Bacteria | 3581 |
| 167 | Ga0496122_0021547 | 3300048925 | Bacteria | 5764 |
| 168 | Ga0496123_0008058 | 3300048926 | Bacteria | 9748 |
| 169 | Ga0496124_0001094 | 3300048927 | Bacteria | 42597 |
| 170 | Ga0496124_0173141 | 3300048927 | Bacteria | 1669 |
| 171 | Ga0496124_0191160 | 3300048927 | Bacteria | 1566 |
| 172 | Ga0496125_0000048 | 3300048928 | Bacteria | 290651 |
| 173 | Ga0496125_0003042 | 3300048928 | Bacteria | 20965 |
| 174 | Ga0496125_0038293 | 3300048928 | Bacteria | 4153 |
| 175 | Ga0496126_0010541 | 3300048929 | Bacteria | 9677 |
| 176 | Ga0496126_0015209 | 3300048929 | Bacteria | 7748 |
| 177 | Ga0496126_0032517 | 3300048929 | Bacteria | 4914 |
| 178 | Ga0496126_0057952 | 3300048929 | Bacteria | 3493 |
| 179 | Ga0496126_0223957 | 3300048929 | Bacteria | 1578 |
| 180 | Ga0501031_0059037 | 3300049568 | Bacteria | 2500 |
| 181 | Ga0501037_0048445 | 3300049573 | Bacteria | 3114 |
| 182 | Ga0501039_0178021 | 3300049575 | Bacteria | 1672 |
| 183 | Ga0501046_0054809 | 3300049580 | Bacteria | 3135 |
| 184 | Ga0501079_0112009 | 3300049741 | Bacteria | 2121 |
| 185 | Ga0501035_0035328 | 3300049822 | Bacteria | 4536 |
| 186 | Ga0501044_0178293 | 3300049823 | Bacteria | 2093 |
| 187 | Ga0501044_0322988 | 3300049823 | Bacteria | 1467 |
| 188 | nmdc:mga06z11_150943_c1 | 3300050494 | Bacteria | 1321 |
| 189 | Ga0495619_0075709 | 3300053085 | Bacteria | 2259 |
| 190 | Ga0500643_008867 | 3300053087 | Bacteria | 3904 |
| 191 | Ga0500646_0003842 | 3300053090 | Bacteria | 3839 |
| 192 | Ga0500651_0005442 | 3300053093 | Bacteria | 7269 |
| 193 | Ga0500566_0000095 | 3300053094 | Bacteria | 44474 |
| 194 | Ga0500566_0000144 | 3300053094 | Bacteria | 36317 |
| 195 | Ga0500566_0029719 | 3300053094 | Bacteria | 3191 |
| 196 | Ga0500640_011108 | 3300053095 | Bacteria | 3660 |
| 197 | Ga0500641_0002790 | 3300053096 | Bacteria | 6185 |
| 198 | Ga0500650_0043583 | 3300053098 | Bacteria | 2075 |
| 199 | Ga0500556_0000306 | 3300053104 | Bacteria | 37363 |
| 200 | Ga0500556_0026844 | 3300053104 | Bacteria | 1917 |
| 201 | Ga0500569_005151 | 3300053109 | Bacteria | 2796 |
| 202 | Ga0500591_017155 | 3300053115 | Bacteria | 3497 |
| 203 | Ga0500592_000206 | 3300053116 | Bacteria | 10815 |
| 204 | Ga0500595_015514 | 3300053119 | Bacteria | 2857 |
| 205 | Ga0500608_000574 | 3300053122 | Bacteria | 13641 |
| 206 | Ga0500608_017382 | 3300053122 | Bacteria | 3266 |
| 207 | Ga0500614_010385 | 3300053123 | Bacteria | 1999 |
| 208 | Ga0500642_0000017 | 3300053130 | Bacteria | 167670 |
| 209 | Ga0500652_003555 | 3300053131 | Bacteria | 4728 |
| 210 | Ga0500559_0001551 | 3300053136 | Bacteria | 12857 |
| 211 | Ga0500559_0003771 | 3300053136 | Bacteria | 7358 |
| 212 | Ga0500559_0018973 | 3300053136 | Bacteria | 2906 |
| 213 | Ga0500573_0010285 | 3300053140 | Bacteria | 5217 |
| 214 | Ga0500577_0003180 | 3300053142 | Bacteria | 4252 |
| 215 | Ga0500586_000797 | 3300053145 | Bacteria | 6449 |
| 216 | Ga0500603_000683 | 3300053150 | Bacteria | 8271 |
| 217 | Ga0500604_0035001 | 3300053151 | Bacteria | 1492 |
| 218 | Ga0500616_0000118 | 3300053153 | Bacteria | 143496 |
| 219 | Ga0500622_0002059 | 3300053156 | Bacteria | 14986 |
| 220 | Ga0500627_0068810 | 3300053158 | Bacteria | 1565 |
| 221 | Ga0500630_004675 | 3300053159 | Bacteria | 6658 |
| 222 | Ga0500634_0022391 | 3300053161 | Bacteria | 3429 |
| 223 | Ga0500638_024853 | 3300053162 | Bacteria | 2860 |
| 224 | Ga0500639_002252 | 3300053163 | Bacteria | 9653 |
| 225 | Ga0500636_0002589 | 3300053177 | Bacteria | 10039 |
| 226 | Ga0500637_0020347 | 3300053178 | Bacteria | 3592 |
| 227 | Ga0500567_050300 | 3300053723 | Bacteria | 1909 |
| 228 | Ga0500609_001614 | 3300053731 | Bacteria | 3283 |
| 229 | 2513858988 | 2513237137 | Bacteria | 9558895 |
| 230 | 2603858141 | 2602042107 | Bacteria | 6226103 |
| 231 | 2644290081 | 2643221651 | Bacteria | 4798932 |
| 232 | 2857527530 | 2857524615 | Bacteria | 6615449 |
| 233 | 2893067024 | 2893066018 | Bacteria | 6158120 |
| 234 | 2906613006 | |||
| 235 | 2906641118 | 2906635258 | Bacteria | 8601019 |
| 236 | 2919073379 | 2919073203 | Bacteria | 6531949 |
| 237 | 8006971519 | 8006964411 | Bacteria | 8966052 |
| 238 | Ga0500578_0064765 | |||
| 239 | JGI25406J46586_10000059 | |||
| 240 | JGI25153J46596_10028975 | |||
| 241 | JGI25404J52841_10002530 | |||
| 242 | Ga0070680_100097284 | |||
| 243 | Ga0070659_100047798 | |||
| 244 | Ga0070667_100068209 | |||
| 245 | Ga0070714_100013408 | |||
| 246 | Ga0070714_100046782 | |||
| 247 | Ga0070713_100000783 | |||
| 248 | Ga0070713_100013634 | |||
| 249 | Ga0070711_100017040 | |||
| 250 | Ga0070711_100053103 | |||
| 251 | Ga0070681_10046420 | |||
| 252 | Ga0070681_10057555 | |||
| 253 | Ga0070679_100016804 | |||
| 254 | Ga0070684_100004411 | |||
| 255 | Ga0070693_100067864 | |||
| 256 | Ga0068855_100020258 | |||
| 257 | Ga0068857_100142331 | |||
| 258 | Ga0068856_100030198 | |||
| 259 | Ga0068852_100030772 | |||
| 260 | Ga0081455_10000607 | |||
| 261 | Ga0081455_10007126 | |||
| 262 | Ga0081455_10009288 | |||
| 263 | Ga0081455_10025258 | |||
| 264 | Ga0081455_10079055 | |||
| 265 | Ga0081540_1002088 | |||
| 266 | Ga0081540_1010965 | |||
| 267 | Ga0081540_1055194 | |||
| 268 | Ga0081539_10000324 | |||
| 269 | Ga0081539_10000466 | |||
| 270 | Ga0081539_10021741 | |||
| 271 | Ga0075365_10002287 | |||
| 272 | Ga0075365_10137832 | |||
| 273 | Ga0075365_10172427 | |||
| 274 | Ga0070715_10000304 | |||
| 275 | Ga0070716_100024879 | |||
| 276 | Ga0070716_100048162 | |||
| 277 | Ga0070712_100008208 | |||
| 278 | Ga0075362_10013029 | |||
| 279 | Ga0105245_10163662 | |||
| 280 | Ga0105245_10271751 | |||
| 281 | Ga0105237_10010423 | |||
| 282 | Ga0105237_10041555 | |||
| 283 | Ga0105238_10041809 | |||
| 284 | Ga0105238_10048402 | |||
| 285 | Ga0105238_10056572 | |||
| 286 | Ga0105239_10034235 | |||
| 287 | Ga0105239_10116305 | |||
| 288 | Ga0157373_10028426 | |||
| 289 | Ga0157369_10007714 | |||
| 290 | Ga0157374_10020275 | |||
| 291 | Ga0163162_10159155 | |||
| 292 | Ga0213876_10000964 | |||
| 293 | Ga0209677_100606 | |||
| 294 | Ga0209233_1005236 | |||
| 295 | Ga0209455_1002406 | |||
| 296 | Ga0209455_1003169 | |||
| 297 | Ga0209564_1000747 | |||
| 298 | Ga0209564_1008058 | |||
| 299 | Ga0209758_1001618 | |||
| 300 | Ga0207692_10000602 | |||
| 301 | Ga0207692_10047723 | |||
| 302 | Ga0207647_10095596 | |||
| 303 | Ga0207685_10008675 | |||
| 304 | Ga0207699_10009417 | |||
| 305 | Ga0207699_10031834 | |||
| 306 | Ga0207707_10008369 | |||
| 307 | Ga0207707_10063297 | |||
| 308 | Ga0207671_10019685 | |||
| 309 | Ga0207693_10009646 | |||
| 310 | Ga0207693_10055835 | |||
| 311 | Ga0207663_10010758 | |||
| 312 | Ga0207663_10012354 | |||
| 313 | Ga0207660_10092487 | |||
| 314 | Ga0207657_10001638 | |||
| 315 | Ga0207652_10052321 | |||
| 316 | Ga0207652_10217804 | |||
| 317 | Ga0207646_10070296 | |||
| 318 | Ga0207700_10047738 | |||
| 319 | Ga0207700_10167804 | |||
| 320 | Ga0207664_10009883 | |||
| 321 | Ga0207690_10128865 | |||
| 322 | Ga0207665_10000913 | |||
| 323 | Ga0207661_10055988 | |||
| 324 | Ga0207667_10076427 | |||
| 325 | Ga0207667_10158570 | |||
| 326 | Ga0207678_10003737 | |||
| 327 | Ga0207648_10076280 | |||
| 328 | Ga0207674_10088488 | |||
| 329 | Ga0268264_10000049 | |||
| 330 | Ga0265319_1012956 | |||
| 331 | Ga0265323_10002671 | |||
| 332 | Ga0265322_10016191 | |||
| 333 | Ga0265336_10001470 | |||
| 334 | Ga0307515_10126988 | |||
| 335 | Ga0265338_10000024 | |||
| 336 | Ga0307511_10062035 | |||
| 337 | Ga0265339_10000531 | |||
| 338 | Ga0307509_10095462 | |||
| 339 | Ga0265342_10006737 | |||
| 340 | Ga0307516_10073373 | |||
| 341 | Ga0307412_10047676 | |||
| 342 | Ga0307507_10013954 | |||
| 343 | Ga0315911_1000076 | |||
| 344 | Ga0373923_0026450 | |||
| 345 | Ga0373953_0009816 | |||
| 346 | Ga0373943_0010390 | |||
| 347 | Ga0373943_0092164 | |||
| 348 | Ga0373931_0050404 | |||
| 349 | Ga0373935_0082287 | |||
| 350 | Ga0373927_0006790 | |||
| 351 | Ga0373927_0097092 | |||
| 352 | Ga0373933_0010138 | |||
| 353 | Ga0373947_0050236 | |||
| 354 | Ga0373947_0059325 | |||
| 355 | Ga0373937_0165365 | |||
| 356 | Ga0373925_0054453 | |||
| 357 | Ga0373925_0087339 | |||
| 358 | Ga0395900_0001229 | |||
| 359 | Ga0395898_0017347 | |||
| 360 | Ga0395905_0018502 | |||
| 361 | Ga0395901_0145291 | |||
| 362 | Ga0395901_0207141 | |||
| 363 | Ga0436365_0184625 | |||
| 364 | Ga0436361_0156582 | |||
| 365 | Ga0436361_0626869 | |||
| 366 | Ga0466963_0031196 | |||
| 367 | Ga0466959_0057082 | |||
| 368 | Ga0466967_0016952 | |||
| 369 | Ga0495592_0061052 | |||
| 370 | Ga0495651_0057390 | |||
| 371 | Ga0495580_0009093 | |||
| 372 | Ga0495639_0037289 | |||
| 373 | Ga0495664_0004571 | |||
| 374 | Ga0495606_0000244 | |||
| 375 | Ga0495606_0059607 | |||
| 376 | Ga0495618_0097179 | |||
| 377 | Ga0495648_0002889 | |||
| 378 | Ga0495652_0060140 | |||
| 379 | Ga0495665_0023543 | |||
| 380 | Ga0495656_0070288 | |||
| 381 | Ga0495634_0024947 | |||
| 382 | Ga0495646_0025619 | |||
| 383 | Ga0495647_0010696 | |||
| 384 | Ga0495658_0052399 | |||
| 385 | Ga0495613_0044028 | |||
| 386 | Ga0495624_0016697 | |||
| 387 | Ga0495686_0011347 | |||
| 388 | Ga0495593_0063791 | |||
| 389 | Ga0496106_0000713 | |||
| 390 | Ga0496112_0000019 | |||
| 391 | Ga0496115_0016822 | |||
| 392 | Ga0496116_0004642 | |||
| 393 | Ga0496118_0005960 | |||
| 394 | Ga0496118_0051934 | |||
| 395 | Ga0496119_0119080 | |||
| 396 | Ga0496121_0000261 | |||
| 397 | Ga0496121_0002241 | |||
| 398 | Ga0496121_0003208 | |||
| 399 | Ga0496121_0009971 | |||
| 400 | Ga0496121_0020513 | |||
| 401 | Ga0496121_0024127 | |||
| 402 | Ga0496121_0028316 | |||
| 403 | Ga0496121_0049136 | |||
| 404 | Ga0496122_0021547 | |||
| 405 | Ga0496123_0008058 | |||
| 406 | Ga0496124_0001094 | |||
| 407 | Ga0496124_0173141 | |||
| 408 | Ga0496124_0191160 | |||
| 409 | Ga0496125_0000048 | |||
| 410 | Ga0496125_0003042 | |||
| 411 | Ga0496125_0038293 | |||
| 412 | Ga0496126_0010541 | |||
| 413 | Ga0496126_0015209 | |||
| 414 | Ga0496126_0032517 | |||
| 415 | Ga0496126_0057952 | |||
| 416 | Ga0496126_0223957 | |||
| 417 | Ga0501031_0059037 | |||
| 418 | Ga0501037_0048445 | |||
| 419 | Ga0501039_0178021 | |||
| 420 | Ga0501046_0054809 | |||
| 421 | Ga0501079_0112009 | |||
| 422 | Ga0501035_0035328 | |||
| 423 | Ga0501044_0178293 | |||
| 424 | Ga0501044_0322988 | |||
| 425 | nmdc:mga06z11_150943_c1 | |||
| 426 | Ga0495619_0075709 | |||
| 427 | Ga0500643_008867 | |||
| 428 | Ga0500646_0003842 | |||
| 429 | Ga0500651_0005442 | |||
| 430 | Ga0500566_0000095 | |||
| 431 | Ga0500566_0000144 | |||
| 432 | Ga0500566_0029719 | |||
| 433 | Ga0500640_011108 | |||
| 434 | Ga0500641_0002790 | |||
| 435 | Ga0500650_0043583 | |||
| 436 | Ga0500556_0000306 | |||
| 437 | Ga0500556_0026844 | |||
| 438 | Ga0500569_005151 | |||
| 439 | Ga0500591_017155 | |||
| 440 | Ga0500592_000206 | |||
| 441 | Ga0500595_015514 | |||
| 442 | Ga0500608_000574 | |||
| 443 | Ga0500608_017382 | |||
| 444 | Ga0500614_010385 | |||
| 445 | Ga0500642_0000017 | |||
| 446 | Ga0500652_003555 | |||
| 447 | Ga0500559_0001551 | |||
| 448 | Ga0500559_0003771 | |||
| 449 | Ga0500559_0018973 | |||
| 450 | Ga0500573_0010285 | |||
| 451 | Ga0500577_0003180 | |||
| 452 | Ga0500586_000797 | |||
| 453 | Ga0500603_000683 | |||
| 454 | Ga0500604_0035001 | |||
| 455 | Ga0500616_0000118 | |||
| 456 | Ga0500622_0002059 | |||
| 457 | Ga0500627_0068810 | |||
| 458 | Ga0500630_004675 | |||
| 459 | Ga0500634_0022391 | |||
| 460 | Ga0500638_024853 | |||
| 461 | Ga0500639_002252 | |||
| 462 | Ga0500636_0002589 | |||
| 463 | Ga0500637_0020347 | |||
| 464 | Ga0500567_050300 | |||
| 465 | Ga0500609_001614 | |||
| 466 | 2513858988 | |||
| 467 | 2603858141 | |||
| 468 | 2644290081 | |||
| 469 | 2857527530 | |||
| 470 | 2893067024 | |||
| 471 | 2906613006 | |||
| 472 | 2906641118 | |||
| 473 | 2919073379 | |||
| 474 | 8006971519 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3oon-assembly1.cif.gz_A-2 | the structure of an outer membrance protein from borrelia burgdorferi b31 | 0.9264 | 360 | 462 |
| 7rjj-assembly2.cif.gz_B | crystal structure of the peptidoglycan binding domain of the outer membrane protein (ompa) from klebsiella pneumoniae with bound d-alanine | 0.923 | 363 | 463 |
| 6jfw-assembly2.cif.gz_B | crystal structure of pa0833 periplasmic domain from pseudomonas aeruginosa reveals an unexpected enlarged peptidoglycan binding pocket | 0.9221 | 360 | 464 |
| 7bba-assembly4.cif.gz_D | structure of the tagl peptidoglycan binding domain from eaec t6ss | 0.9201 | 363 | 463 |
| 5u1h-assembly3.cif.gz_C | crystal structure of the c-terminal peptidoglycan binding domain of oprf (pa1777) from pseudomonas aeruginosa | 0.9155 | 360 | 463 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3oonA00 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain | 0.9276 | 360 | 462 | 3.30.1330.60 |
| 6jfwA00 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain | 0.9201 | 361 | 464 | 3.30.1330.60 |
| 5u1hB00 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain | 0.9169 | 360 | 463 | 3.30.1330.60 |
| af_P0A910_199_343_3.30.1330.60 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain | 0.9054 | 361 | 463 | 3.30.1330.60 |
| 5y61D00 | Alpha Beta;2-Layer Sandwich;60s Ribosomal Protein L30; Chain: A;;OmpA-like domain | 0.9009 | 360 | 464 | 3.30.1330.60 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A520QAX7-F1-model_v4 | OmpA family protein | 0.9693 | 361 | 464 |
GO:0005509
GO:0007155 GO:0009279 |
| AF-A0A7Y5L948-F1-model_v4 | OmpA family protein | 0.9676 | 361 | 464 |
GO:0005509
GO:0009279 |
| AF-A0A2G9SUM0-F1-model_v4 | OmpA-like domain-containing protein | 0.9675 | 360 | 463 |
GO:0009279
|
| AF-A0A7W0F002-F1-model_v4 | OmpA family protein | 0.9655 | 361 | 464 |
GO:0005509
GO:0006811 GO:0007155 GO:0009279 GO:0015288 GO:0046930 |
| AF-A0A2E0UJA1-F1-model_v4 | OmpA-like domain-containing protein | 0.9651 | 361 | 464 |
GO:0005509
GO:0006811 GO:0009279 GO:0015288 GO:0046930 |