F350096

General Info

Members Datasets Scaffolds Average Seq Length
237 147 474 308

Family's Representative Sequence

Representative Sequence 3300026095|Ga0207676_10000925|Ga0207676_1000092522
Length 351
Sequence MQRRIWLIAGPTASGKSALALRLADATGADIVNADSMQLYRDLRLLTARPTAEEEARAPHHLFGTVDAADGWSVGRWLRAATELLGEIAARGKPSIVVGGTGLYFRALTKGLAEIPAVPAGTRRQTEAAFETLGEAAFRERLASADPAAAARIAPGDRQRLVRAWEVFAATGAALSDWQRTGEPALPAGTWGGVALDPPRDVLYARCDARLQVMVDQGALDEVTALAARGLDPSLPAMKAVGFRELSAHLRGETSLAQAMEAAQRETRRYAKRQLTWMRGQMAEWPRISAPDAEGQWRASKRWSAKPVHPACFSPVARSTARAAVKPCSTVEISTVKAVIAQSCASFSRRK

Samples

Sample ID Description Type Environment
1 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
66 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
67 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
68 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
69 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
78 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
81 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
84 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
85 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
86 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
87 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
88 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
89 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
90 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
91 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
96 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
97 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
98 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
99 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
100 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
112 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
113 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
114 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
115 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
116 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
117 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
124 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
125 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
126 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
127 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
128 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
129 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
130 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
131 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
132 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
133 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
134 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
135 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
136 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
137 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
138 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
139 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
140 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
141 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
143 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
144 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
145 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
146 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
147 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.31
Metatranscriptomes 0
Isolates 1.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.28
Nodule 0
Rhizoplane 3.8
Rhizosphere 78.06
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207676_10000925 3300026095 Bacteria 22719
2 Ga0070670_100000009 3300005331 Bacteria 291074
3 Ga0070670_100020051 3300005331 Bacteria 5743
4 Ga0070670_100098601 3300005331 Bacteria 2515
5 Ga0070666_10072942 3300005335 Bacteria 2338
6 Ga0070666_10188938 3300005335 Bacteria 1447
7 Ga0070680_100006928 3300005336 Bacteria 8635
8 Ga0070691_10024166 3300005341 Bacteria 2824
9 Ga0070668_100002255 3300005347 Bacteria 14202
10 Ga0070668_100006897 3300005347 Bacteria 8419
11 Ga0070669_100017111 3300005353 Bacteria 5172
12 Ga0070669_100043582 3300005353 Bacteria 3269
13 Ga0070671_100002166 3300005355 Bacteria 15151
14 Ga0070671_100033878 3300005355 Bacteria 4226
15 Ga0070667_100000218 3300005367 Bacteria 66273
16 Ga0070667_100040608 3300005367 Bacteria 3901
17 Ga0070663_100087894 3300005455 Bacteria 2298
18 Ga0070681_10068457 3300005458 Bacteria 3516
19 Ga0070681_10170306 3300005458 Bacteria 2099
20 Ga0070679_100017034 3300005530 Bacteria 7025
21 Ga0070665_100001962 3300005548 Bacteria 23145
22 Ga0070665_100013543 3300005548 Bacteria 8204
23 Ga0070665_100063328 3300005548 Bacteria 3708
24 Ga0070665_100085718 3300005548 Bacteria 3156
25 Ga0068855_100011542 3300005563 Bacteria 10671
26 Ga0068855_100029545 3300005563 Bacteria 6551
27 Ga0068855_100233905 3300005563 Bacteria 2056
28 Ga0068856_100387175 3300005614 Bacteria 1418
29 Ga0068852_100171237 3300005616 Bacteria 2035
30 Ga0068859_100000093 3300005617 Bacteria 82384
31 Ga0068859_100024835 3300005617 Bacteria 6015
32 Ga0068859_100081569 3300005617 Bacteria 3277
33 Ga0068864_100000151 3300005618 Bacteria 65372
34 Ga0068864_100049585 3300005618 Bacteria 3612
35 Ga0068864_100101532 3300005618 Bacteria 2551
36 Ga0068863_100000470 3300005841 Bacteria 41201
37 Ga0068863_100002660 3300005841 Bacteria 17667
38 Ga0068863_100012458 3300005841 Bacteria 8210
39 Ga0068863_100265730 3300005841 Bacteria 1659
40 Ga0068858_100000240 3300005842 Bacteria 59201
41 Ga0068858_100010128 3300005842 Bacteria 8950
42 Ga0068858_100014428 3300005842 Bacteria 7449
43 Ga0068858_100053102 3300005842 Bacteria 3750
44 Ga0068858_100244342 3300005842 Bacteria 1704
45 Ga0068860_100000184 3300005843 Bacteria 100730
46 Ga0068860_100039825 3300005843 Bacteria 4494
47 Ga0068860_100072090 3300005843 Bacteria 3282
48 Ga0068860_100158562 3300005843 Bacteria 2181
49 Ga0068862_100002307 3300005844 Bacteria 17033
50 Ga0068862_100022254 3300005844 Bacteria 5301
51 Ga0081538_10003566 3300005981 Bacteria 14644
52 Ga0081538_10028812 3300005981 Bacteria 3809
53 Ga0075364_10006070 3300006051 Bacteria 7074
54 Ga0075370_10006341 3300006353 Bacteria 5941
55 Ga0097620_100000093 3300006931 Bacteria 82384
56 Ga0097620_100024835 3300006931 Bacteria 6015
57 Ga0097620_100081569 3300006931 Bacteria 3277
58 Ga0105240_10007126 3300009093 Bacteria 16291
59 Ga0105240_10007270 3300009093 Bacteria 16118
60 Ga0105240_10061096 3300009093 Bacteria 4696
61 Ga0105240_10101111 3300009093 Bacteria 3507
62 Ga0105240_10475455 3300009093 Bacteria 1394
63 Ga0105247_10089648 3300009101 Bacteria 1950
64 Ga0105248_10002049 3300009177 Bacteria 22323
65 Ga0105248_10008525 3300009177 Bacteria 11255
66 Ga0105248_10017222 3300009177 Bacteria 7962
67 Ga0105248_10032644 3300009177 Bacteria 5817
68 Ga0105238_10147767 3300009551 Bacteria 2326
69 Ga0105249_10000789 3300009553 Bacteria 28444
70 Ga0105239_10429255 3300010375 Bacteria 1498
71 Ga0157373_10014538 3300013100 Bacteria 5770
72 Ga0157370_10043026 3300013104 Bacteria 4349
73 Ga0163162_10140091 3300013306 Bacteria 2531
74 Ga0157372_10452776 3300013307 Bacteria 1496
75 Ga0157375_10034112 3300013308 Bacteria 4845
76 Ga0163163_10016918 3300014325 Bacteria 6789
77 Ga0163163_10070000 3300014325 Bacteria 3493
78 Ga0157379_10000552 3300014968 Bacteria 30177
79 Ga0157379_10025768 3300014968 Bacteria 5227
80 Ga0157379_10172722 3300014968 Bacteria 1951
81 Ga0213874_10021262 3300021377 Bacteria 1787
82 Ga0213876_10000411 3300021384 Bacteria 35947
83 Ga0213876_10005161 3300021384 Bacteria 7200
84 Ga0207680_10056115 3300025903 Bacteria 2378
85 Ga0207680_10069579 3300025903 Bacteria 2175
86 Ga0207680_10164192 3300025903 Bacteria 1492
87 Ga0207695_10001525 3300025913 Bacteria 38311
88 Ga0207695_10001672 3300025913 Bacteria 35718
89 Ga0207695_10007111 3300025913 Bacteria 14337
90 Ga0207695_10020168 3300025913 Bacteria 7643
91 Ga0207695_10041938 3300025913 Bacteria 4893
92 Ga0207695_10054598 3300025913 Bacteria 4170
93 Ga0207660_10123201 3300025917 Bacteria 1966
94 Ga0207652_10055873 3300025921 Bacteria 3397
95 Ga0207681_10014810 3300025923 Bacteria 4856
96 Ga0207694_10114333 3300025924 Bacteria 2149
97 Ga0207650_10000014 3300025925 Bacteria 398063
98 Ga0207650_10090425 3300025925 Bacteria 2338
99 Ga0207650_10092559 3300025925 Bacteria 2313
100 Ga0207644_10006317 3300025931 Bacteria 7714
101 Ga0207644_10065675 3300025931 Bacteria 2639
102 Ga0207711_10001339 3300025941 Bacteria 23287
103 Ga0207711_10008691 3300025941 Bacteria 8497
104 Ga0207711_10012900 3300025941 Bacteria 6939
105 Ga0207711_10107623 3300025941 Bacteria 2476
106 Ga0207667_10087144 3300025949 Bacteria 3230
107 Ga0207668_10000033 3300025972 Bacteria 121080
108 Ga0207668_10000322 3300025972 Bacteria 31034
109 Ga0207668_10002382 3300025972 Bacteria 10983
110 Ga0207668_10024681 3300025972 Bacteria 3883
111 Ga0207658_10000315 3300025986 Bacteria 48800
112 Ga0207658_10008572 3300025986 Bacteria 6956
113 Ga0207658_10023536 3300025986 Bacteria 4301
114 Ga0207703_10000079 3300026035 Bacteria 112451
115 Ga0207703_10003197 3300026035 Bacteria 13795
116 Ga0207703_10059781 3300026035 Bacteria 3114
117 Ga0207702_10302955 3300026078 Bacteria 1517
118 Ga0207641_10000034 3300026088 Bacteria 217752
119 Ga0207641_10002752 3300026088 Bacteria 16044
120 Ga0207641_10035568 3300026088 Bacteria 4150
121 Ga0207641_10047758 3300026088 Bacteria 3611
122 Ga0207676_10000103 3300026095 Bacteria 76865
123 Ga0207676_10014235 3300026095 Bacteria 5716
124 Ga0207675_100096963 3300026118 Bacteria 2776
125 Ga0207683_10139621 3300026121 Bacteria 2183
126 Ga0207698_10173322 3300026142 Bacteria 1902
127 Ga0268266_10001055 3300028379 Bacteria 34552
128 Ga0268266_10028397 3300028379 Bacteria 4756
129 Ga0268266_10115153 3300028379 Bacteria 2386
130 Ga0268265_10002715 3300028380 Bacteria 13097
131 Ga0268265_10101813 3300028380 Bacteria 2321
132 Ga0268264_10000124 3300028381 Bacteria 187493
133 Ga0268264_10000170 3300028381 Bacteria 144898
134 Ga0268264_10015900 3300028381 Bacteria 6163
135 Ga0268264_10038168 3300028381 Bacteria 3962
136 Ga0307517_10007858 3300028786 Bacteria 15448
137 Ga0307517_10045896 3300028786 Bacteria 4576
138 Ga0307517_10059074 3300028786 Bacteria 3680
139 Ga0307517_10175910 3300028786 Bacteria 1394
140 Ga0265338_10030398 3300028800 Bacteria 5322
141 Ga0307513_10000303 3300031456 Bacteria 70737
142 Ga0307513_10012719 3300031456 Bacteria 10365
143 Ga0307513_10061585 3300031456 Bacteria 3972
144 Ga0307414_10018721 3300032004 Bacteria 4272
145 Ga0307510_10049080 3300033180 Bacteria 4494
146 Ga0373936_0009437 3300035113 Bacteria 3679
147 Ga0373935_0039595 3300035692 Bacteria 2955
148 Ga0373925_0000067 3300037068 Bacteria 110348
149 Ga0395899_0000026 3300037312 Bacteria 345291
150 Ga0395900_0028120 3300037418 Bacteria 5757
151 Ga0395898_0206398 3300037466 Bacteria 1875
152 Ga0395905_0037648 3300037471 Bacteria 4540
153 Ga0395905_0171997 3300037471 Bacteria 2035
154 Ga0395901_0136377 3300038443 Bacteria 2579
155 Ga0436365_0209892 3300039437 Bacteria 72774
156 Ga0436365_1283333 3300039437 Bacteria 6676
157 Ga0436361_0792320 3300039447 Bacteria 1538
158 Ga0436363_0477155 3300039450 Bacteria 5443
159 Ga0466959_0064567 3300045049 Bacteria 2658
160 Ga0495629_0057828 3300046459 Bacteria 2711
161 Ga0495610_0048780 3300046512 Bacteria 2077
162 Ga0495628_0191731 3300046516 Bacteria 1543
163 Ga0495642_0007881 3300046528 Bacteria 4079
164 Ga0495642_0067674 3300046528 Bacteria 1490
165 Ga0495597_0011671 3300046542 Bacteria 4255
166 Ga0495622_0030056 3300046557 Bacteria 2538
167 Ga0495611_0023716 3300046648 Bacteria 2665
168 Ga0495669_0000022 3300046684 Bacteria 117864
169 Ga0495669_0048575 3300046684 Bacteria 1899
170 Ga0495672_0017095 3300047320 Bacteria 4859
171 Ga0495677_0106081 3300047445 Bacteria 1066
172 Ga0496102_0006240 3300048905 Bacteria 10163
173 Ga0496103_0029818 3300048906 Bacteria 3317
174 Ga0496103_0088557 3300048906 Bacteria 1952
175 Ga0496109_0124792 3300048912 Bacteria 2400
176 Ga0496110_0073206 3300048913 Bacteria 3041
177 Ga0496112_0042214 3300048915 Bacteria 4462
178 Ga0496112_0616645 3300048915 Bacteria 1016
179 Ga0496113_0112706 3300048916 Bacteria 2119
180 Ga0496115_0001826 3300048918 Bacteria 15237
181 Ga0496118_0016109 3300048921 Bacteria 6876
182 Ga0496119_0053233 3300048922 Bacteria 2474
183 Ga0496121_0000130 3300048924 Bacteria 168094
184 Ga0501031_0031476 3300049568 Bacteria 3461
185 Ga0501033_0187544 3300049570 Bacteria 1481
186 Ga0501037_0152715 3300049573 Bacteria 1650
187 Ga0501037_0163784 3300049573 Bacteria 1584
188 Ga0501039_0025993 3300049575 Bacteria 4500
189 Ga0501040_0003036 3300049576 Bacteria 10886
190 Ga0501041_0036620 3300049577 Bacteria 2972
191 Ga0501042_0017517 3300049578 Bacteria 4941
192 Ga0501043_0036364 3300049579 Bacteria 3873
193 Ga0501046_0146521 3300049580 Bacteria 1783
194 Ga0501047_0005483 3300049581 Bacteria 11937
195 Ga0501047_0356558 3300049581 Bacteria 1299
196 Ga0501048_0012313 3300049582 Bacteria 6366
197 Ga0501071_0027993 3300049587 Bacteria 3968
198 Ga0501072_0042555 3300049588 Bacteria 3567
199 Ga0501074_0129921 3300049590 Bacteria 1802
200 Ga0501075_0025663 3300049591 Bacteria 4329
201 Ga0501076_0005075 3300049592 Bacteria 9425
202 Ga0501077_0038823 3300049593 Bacteria 3032
203 Ga0501079_0030651 3300049741 Bacteria 4133
204 Ga0501080_0304192 3300049742 Bacteria 1446
205 Ga0501081_0035680 3300049743 Bacteria 3385
206 Ga0501081_0100712 3300049743 Bacteria 2042
207 Ga0501035_0070867 3300049822 Bacteria 3087
208 Ga0501044_0008820 3300049823 Bacteria 11029
209 Ga0501044_0199109 3300049823 Bacteria 1962
210 Ga0501045_0013216 3300049824 Bacteria 5824
211 nmdc:mga00v17_13668_c1 3300050491 Bacteria 4512
212 nmdc:mga06z11_146758_c1 3300050494 Bacteria 1338
213 nmdc:mga07m45_15576_c1 3300050496 Bacteria 4060
214 Ga0500635_0000174 3300053080 Bacteria 33055
215 Ga0500643_009142 3300053087 Bacteria 3814
216 Ga0500643_010461 3300053087 Bacteria 3450
217 Ga0500647_0041587 3300053091 Bacteria 2205
218 Ga0500651_0013401 3300053093 Bacteria 4996
219 Ga0500555_031421 3300053103 Bacteria 1504
220 Ga0500569_000626 3300053109 Bacteria 6014
221 Ga0500608_011029 3300053122 Bacteria 3907
222 Ga0500614_026860 3300053123 Bacteria 1379
223 Ga0500559_0033324 3300053136 Bacteria 2217
224 Ga0500590_030883 3300053148 Bacteria 2778
225 Ga0500619_013672 3300053154 Bacteria 2159
226 Ga0500636_0052053 3300053177 Bacteria 2406
227 Ga0500636_0052674 3300053177 Bacteria 2389
228 Ga0500637_0045740 3300053178 Bacteria 2483
229 Ga0500625_037391 3300053729 Bacteria 2295
230 Ga0500596_000642 3300053735 Bacteria 6734
231 Ga0501084_0042412 3300054114 Bacteria 3806
232 Ga0501082_0037325 3300060353 Bacteria 4188
233 Ga0530510_0008501 3300061734 Bacteria 7159
234 2643999909 2643221598 Bacteria 4578346
235 2644088341 2643221614 Bacteria 4260023
236 2644343577 2643221661 Bacteria 4267604
237 2644368945 2643221666 Bacteria 4265935
238 Ga0207676_10000925
239 Ga0070670_100000009
240 Ga0070670_100020051
241 Ga0070670_100098601
242 Ga0070666_10072942
243 Ga0070666_10188938
244 Ga0070680_100006928
245 Ga0070691_10024166
246 Ga0070668_100002255
247 Ga0070668_100006897
248 Ga0070669_100017111
249 Ga0070669_100043582
250 Ga0070671_100002166
251 Ga0070671_100033878
252 Ga0070667_100000218
253 Ga0070667_100040608
254 Ga0070663_100087894
255 Ga0070681_10068457
256 Ga0070681_10170306
257 Ga0070679_100017034
258 Ga0070665_100001962
259 Ga0070665_100013543
260 Ga0070665_100063328
261 Ga0070665_100085718
262 Ga0068855_100011542
263 Ga0068855_100029545
264 Ga0068855_100233905
265 Ga0068856_100387175
266 Ga0068852_100171237
267 Ga0068859_100000093
268 Ga0068859_100024835
269 Ga0068859_100081569
270 Ga0068864_100000151
271 Ga0068864_100049585
272 Ga0068864_100101532
273 Ga0068863_100000470
274 Ga0068863_100002660
275 Ga0068863_100012458
276 Ga0068863_100265730
277 Ga0068858_100000240
278 Ga0068858_100010128
279 Ga0068858_100014428
280 Ga0068858_100053102
281 Ga0068858_100244342
282 Ga0068860_100000184
283 Ga0068860_100039825
284 Ga0068860_100072090
285 Ga0068860_100158562
286 Ga0068862_100002307
287 Ga0068862_100022254
288 Ga0081538_10003566
289 Ga0081538_10028812
290 Ga0075364_10006070
291 Ga0075370_10006341
292 Ga0097620_100000093
293 Ga0097620_100024835
294 Ga0097620_100081569
295 Ga0105240_10007126
296 Ga0105240_10007270
297 Ga0105240_10061096
298 Ga0105240_10101111
299 Ga0105240_10475455
300 Ga0105247_10089648
301 Ga0105248_10002049
302 Ga0105248_10008525
303 Ga0105248_10017222
304 Ga0105248_10032644
305 Ga0105238_10147767
306 Ga0105249_10000789
307 Ga0105239_10429255
308 Ga0157373_10014538
309 Ga0157370_10043026
310 Ga0163162_10140091
311 Ga0157372_10452776
312 Ga0157375_10034112
313 Ga0163163_10016918
314 Ga0163163_10070000
315 Ga0157379_10000552
316 Ga0157379_10025768
317 Ga0157379_10172722
318 Ga0213874_10021262
319 Ga0213876_10000411
320 Ga0213876_10005161
321 Ga0207680_10056115
322 Ga0207680_10069579
323 Ga0207680_10164192
324 Ga0207695_10001525
325 Ga0207695_10001672
326 Ga0207695_10007111
327 Ga0207695_10020168
328 Ga0207695_10041938
329 Ga0207695_10054598
330 Ga0207660_10123201
331 Ga0207652_10055873
332 Ga0207681_10014810
333 Ga0207694_10114333
334 Ga0207650_10000014
335 Ga0207650_10090425
336 Ga0207650_10092559
337 Ga0207644_10006317
338 Ga0207644_10065675
339 Ga0207711_10001339
340 Ga0207711_10008691
341 Ga0207711_10012900
342 Ga0207711_10107623
343 Ga0207667_10087144
344 Ga0207668_10000033
345 Ga0207668_10000322
346 Ga0207668_10002382
347 Ga0207668_10024681
348 Ga0207658_10000315
349 Ga0207658_10008572
350 Ga0207658_10023536
351 Ga0207703_10000079
352 Ga0207703_10003197
353 Ga0207703_10059781
354 Ga0207702_10302955
355 Ga0207641_10000034
356 Ga0207641_10002752
357 Ga0207641_10035568
358 Ga0207641_10047758
359 Ga0207676_10000103
360 Ga0207676_10014235
361 Ga0207675_100096963
362 Ga0207683_10139621
363 Ga0207698_10173322
364 Ga0268266_10001055
365 Ga0268266_10028397
366 Ga0268266_10115153
367 Ga0268265_10002715
368 Ga0268265_10101813
369 Ga0268264_10000124
370 Ga0268264_10000170
371 Ga0268264_10015900
372 Ga0268264_10038168
373 Ga0307517_10007858
374 Ga0307517_10045896
375 Ga0307517_10059074
376 Ga0307517_10175910
377 Ga0265338_10030398
378 Ga0307513_10000303
379 Ga0307513_10012719
380 Ga0307513_10061585
381 Ga0307414_10018721
382 Ga0307510_10049080
383 Ga0373936_0009437
384 Ga0373935_0039595
385 Ga0373925_0000067
386 Ga0395899_0000026
387 Ga0395900_0028120
388 Ga0395898_0206398
389 Ga0395905_0037648
390 Ga0395905_0171997
391 Ga0395901_0136377
392 Ga0436365_0209892
393 Ga0436365_1283333
394 Ga0436361_0792320
395 Ga0436363_0477155
396 Ga0466959_0064567
397 Ga0495629_0057828
398 Ga0495610_0048780
399 Ga0495628_0191731
400 Ga0495642_0007881
401 Ga0495642_0067674
402 Ga0495597_0011671
403 Ga0495622_0030056
404 Ga0495611_0023716
405 Ga0495669_0000022
406 Ga0495669_0048575
407 Ga0495672_0017095
408 Ga0495677_0106081
409 Ga0496102_0006240
410 Ga0496103_0029818
411 Ga0496103_0088557
412 Ga0496109_0124792
413 Ga0496110_0073206
414 Ga0496112_0042214
415 Ga0496112_0616645
416 Ga0496113_0112706
417 Ga0496115_0001826
418 Ga0496118_0016109
419 Ga0496119_0053233
420 Ga0496121_0000130
421 Ga0501031_0031476
422 Ga0501033_0187544
423 Ga0501037_0152715
424 Ga0501037_0163784
425 Ga0501039_0025993
426 Ga0501040_0003036
427 Ga0501041_0036620
428 Ga0501042_0017517
429 Ga0501043_0036364
430 Ga0501046_0146521
431 Ga0501047_0005483
432 Ga0501047_0356558
433 Ga0501048_0012313
434 Ga0501071_0027993
435 Ga0501072_0042555
436 Ga0501074_0129921
437 Ga0501075_0025663
438 Ga0501076_0005075
439 Ga0501077_0038823
440 Ga0501079_0030651
441 Ga0501080_0304192
442 Ga0501081_0035680
443 Ga0501081_0100712
444 Ga0501035_0070867
445 Ga0501044_0008820
446 Ga0501044_0199109
447 Ga0501045_0013216
448 nmdc:mga00v17_13668_c1
449 nmdc:mga06z11_146758_c1
450 nmdc:mga07m45_15576_c1
451 Ga0500635_0000174
452 Ga0500643_009142
453 Ga0500643_010461
454 Ga0500647_0041587
455 Ga0500651_0013401
456 Ga0500555_031421
457 Ga0500569_000626
458 Ga0500608_011029
459 Ga0500614_026860
460 Ga0500559_0033324
461 Ga0500590_030883
462 Ga0500619_013672
463 Ga0500636_0052053
464 Ga0500636_0052674
465 Ga0500637_0045740
466 Ga0500625_037391
467 Ga0500596_000642
468 Ga0501084_0042412
469 Ga0501082_0037325
470 Ga0530510_0008501
471 2643999909
472 2644088341
473 2644343577
474 2644368945

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01715

IPPT

IPP transferase

38

281

0.96

PF01745

IPT

Isopentenyl transferase

3

59

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3crr-assembly1.cif.gz_A structure of trna dimethylallyltransferase: rna modification through a channel 0.9055 1 304
3crr-assembly1.cif.gz_A structure of trna dimethylallyltransferase: rna modification through a channel 0.8799 1 304
2zm5-assembly1.cif.gz_A crystal structure of trna modification enzyme miaa in the complex with trna(phe) 0.876 1 304
2zm5-assembly1.cif.gz_A crystal structure of trna modification enzyme miaa in the complex with trna(phe) 0.8628 1 304
2qgn-assembly1.cif.gz_A crystal structure of trna isopentenylpyrophosphate transferase (bh2366) from bacillus halodurans, northeast structural genomics consortium target bhr41. 0.8477 3 304
ID Description Score Start End Superfamily
3d3qB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9444 5 108 3.40.50.300
3crrA02 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 0.9389 201 280 1.10.287.890
3crrA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.937 1 108 3.40.50.300
3a8tA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9202 1 109 3.40.50.300
af_Q8I0X4_385_453_1.10.20.140 Mainly Alpha;Orthogonal Bundle;Histone, subunit A; 0.9166 130 177 1.10.20.140
ID Description Score Start End GO Terms
AF-A0A326KWH6-F1-model_v4 deleted 0.9583 2 290
AF-A0A354ERX3-F1-model_v4 tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase) 0.9525 2 289 GO:0005524
GO:0006400
GO:0052381
AF-A0A2W4SR03-F1-model_v4 deleted 0.9468 1 287
AF-A0A4Q3XQG2-F1-model_v4 tRNA dimethylallyltransferase 0.9378 85 288 GO:0005524
GO:0006400
GO:0052381
AF-Q0AN24-F1-model_v4 tRNA dimethylallyltransferase (EC 2.5.1.75) (Dimethylallyl diphosphate:tRNA dimethylallyltransferase) (DMAPP:tRNA dimethylallyltransferase) (DMATase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPP transferase) (IPPT) (IPTase) 0.9357 1 304 GO:0005524
GO:0006400
GO:0052381

Map