F349944
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 237 | 169 | 474 | 647 |
Family's Representative Sequence
| Representative Sequence | 3300009093|Ga0105240_10017233|Ga0105240_100172332 |
| Length | 697 |
| Sequence | VAFELPDESVLAYIEPVASSPNQSSKDSMSTATKVKKAPSSPASATAHVNIDSLSKEHRVFKPNPKFVKAARIDSLKKYKKMHKASLKNPDKFWGKAAEEELTWFRKWKKVCVWKPPFAEWFVGGKLNASVNCLDRHLTGPSRNKAAIIFEGEPGDVTTLTYQQLHREVCLMANVLKKHGVKMGDRVMIYLPMIPEAVVAMLACARIGAPHSVVFSGFSAEALKERINDCDARVLITADGGFRRGSALGVKKNADLALQGAPKVKSVLVVQRTKQEVNMTPGRDFWLHEEVQTVSPVCKAEVLDSEHPLFILYTSGSTGKPKGILHTTGGYLLGCHMTTKYYFDIKPEDVYFCTADVGWITGHSYVAYGVLSNGGTSLIYEGVPNFPEPDRFWRIIDRHKVNIFYTAPTAIRSFIKWGDDWLTPHDLSSLRLLGSVGEPINPEAWMWYHTKVGGKRCPIVDTWWQTETGCHMIAPMPGAVPTKPGSATLPFFGVDAAVVDDDGNETPVNVGGKLVIRRPWPSMLRSIYGDAARYRKTYWSEVKGCYFAGDGAHRDKDGYFWIMGRIDDVLNVAGHRLGTSEVESALVSHPDIAEAAVVGRPDELTGQAIVAFVTLKNGVQHSPGLKEALRAHVGKEIGPIAKPNDIRFVDGLPKTRSGKIMRRLIKEVAASPTGEIKGDTTTLEDLNVLAKLKSTEE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 2 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 4 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 5 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 7 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 15 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 18 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 19 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 21 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 22 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 23 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 24 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 25 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 27 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 38 | 3300025271 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 40 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 64 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 67 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 68 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 69 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 70 | 3300031090 | Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 71 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 72 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 73 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 74 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 75 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 76 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 77 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 78 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 79 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 80 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 81 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 82 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 83 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 84 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 85 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 86 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 87 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 88 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 89 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 90 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 91 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 92 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 93 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 94 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 95 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 96 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 97 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 98 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 99 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 100 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 101 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 102 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 103 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 104 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 105 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 137 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 138 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 139 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 140 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 141 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 142 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 143 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 144 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 145 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 146 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 147 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 148 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 149 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 150 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 151 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 152 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 153 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 154 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 155 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 156 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 157 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 158 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 159 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 160 | 3300053103 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere | Metagenome | Endosphere |
| 161 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 162 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 163 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 164 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 165 | 2524614857 | Deinococcus ficus DSM 19119 | Isolate | Rhizosphere |
| 166 | 2643221545 | Caulobacter sp. Root1455 | Isolate | Unclassified |
| 167 | 2643221691 | Caulobacter sp. Root487D2Y | Isolate | Unclassified |
| 168 | 2739367875 | Deinococcus ficus CC-FR2-10 | Isolate | Unclassified |
| 169 | 2786546548 | Spartobacteria bacterium LR76 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.47 |
| Metatranscriptomes | 0.42 |
| Isolates | 2.11 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.95 |
| Nodule | 0 |
| Rhizoplane | 2.11 |
| Rhizosphere | 90.3 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0105240_10017233 | 3300009093 | Bacteria | 9743 |
| 2 | Ga0065704_10076028 | 3300005289 | Bacteria | 5300 |
| 3 | Ga0065715_10107871 | 3300005293 | Bacteria | 2748 |
| 4 | Ga0065707_10116922 | 3300005295 | Bacteria | 2224 |
| 5 | Ga0070670_100003629 | 3300005331 | Bacteria | 12852 |
| 6 | Ga0068869_100044175 | 3300005334 | Bacteria | 3204 |
| 7 | Ga0070660_100015588 | 3300005339 | Bacteria | 5492 |
| 8 | Ga0070675_100072387 | 3300005354 | Bacteria | 2862 |
| 9 | Ga0070675_100081148 | 3300005354 | Bacteria | 2704 |
| 10 | Ga0070671_100002062 | 3300005355 | Bacteria | 15501 |
| 11 | Ga0070673_100059406 | 3300005364 | Bacteria | 3026 |
| 12 | Ga0070709_10045061 | 3300005434 | Bacteria | 2735 |
| 13 | Ga0070708_100000950 | 3300005445 | Bacteria | 21971 |
| 14 | Ga0070708_100099706 | 3300005445 | Bacteria | 2658 |
| 15 | Ga0070681_10021508 | 3300005458 | Bacteria | 6465 |
| 16 | Ga0070706_100001169 | 3300005467 | Bacteria | 28200 |
| 17 | Ga0070706_100008866 | 3300005467 | Bacteria | 9371 |
| 18 | Ga0070707_100005933 | 3300005468 | Bacteria | 11400 |
| 19 | Ga0070707_100012562 | 3300005468 | Bacteria | 7910 |
| 20 | Ga0070707_100015796 | 3300005468 | Bacteria | 7088 |
| 21 | Ga0070707_100016753 | 3300005468 | Bacteria | 6879 |
| 22 | Ga0070707_100036177 | 3300005468 | Bacteria | 4711 |
| 23 | Ga0070698_100003606 | 3300005471 | Bacteria | 17018 |
| 24 | Ga0070684_100045525 | 3300005535 | Bacteria | 3799 |
| 25 | Ga0070697_100001381 | 3300005536 | Bacteria | 18360 |
| 26 | Ga0070665_100000037 | 3300005548 | Bacteria | 312727 |
| 27 | Ga0070665_100043102 | 3300005548 | Bacteria | 4536 |
| 28 | Ga0070665_100182764 | 3300005548 | Bacteria | 2097 |
| 29 | Ga0068863_100015271 | 3300005841 | Bacteria | 7379 |
| 30 | Ga0068858_100003247 | 3300005842 | Bacteria | 16208 |
| 31 | Ga0068858_100019856 | 3300005842 | Bacteria | 6282 |
| 32 | Ga0068860_100021799 | 3300005843 | Bacteria | 6198 |
| 33 | Ga0081455_10000953 | 3300005937 | Bacteria | 37056 |
| 34 | Ga0081455_10056255 | 3300005937 | Bacteria | 3342 |
| 35 | Ga0081455_10103688 | 3300005937 | Bacteria | 2277 |
| 36 | Ga0081538_10005028 | 3300005981 | Bacteria | 12040 |
| 37 | Ga0081538_10007566 | 3300005981 | Bacteria | 9373 |
| 38 | Ga0070717_10023719 | 3300006028 | Bacteria | 4864 |
| 39 | Ga0099794_10000024 | 3300007265 | Bacteria | 62816 |
| 40 | Ga0111539_10016181 | 3300009094 | Bacteria | 9253 |
| 41 | Ga0105245_10003026 | 3300009098 | Bacteria | 15075 |
| 42 | Ga0105237_10034665 | 3300009545 | Bacteria | 5109 |
| 43 | Ga0105249_10024524 | 3300009553 | Bacteria | 5422 |
| 44 | Ga0157369_10007025 | 3300013105 | Bacteria | 12982 |
| 45 | Ga0157374_10000028 | 3300013296 | Bacteria | 213725 |
| 46 | Ga0157374_10005749 | 3300013296 | Bacteria | 10464 |
| 47 | Ga0157378_10000963 | 3300013297 | Bacteria | 26380 |
| 48 | Ga0157375_10001269 | 3300013308 | Bacteria | 21823 |
| 49 | Ga0157379_10150956 | 3300014968 | Bacteria | 2096 |
| 50 | Ga0157376_10051845 | 3300014969 | Bacteria | 3409 |
| 51 | Ga0213876_10006004 | 3300021384 | Bacteria | 6641 |
| 52 | Ga0207666_1000480 | 3300025271 | Bacteria | 5024 |
| 53 | Ga0209256_1000897 | 3300025299 | Bacteria | 36512 |
| 54 | Ga0207697_10002055 | 3300025315 | Bacteria | 10602 |
| 55 | Ga0207697_10002164 | 3300025315 | Bacteria | 10289 |
| 56 | Ga0207697_10013724 | 3300025315 | Bacteria | 3376 |
| 57 | Ga0207684_10000182 | 3300025910 | Bacteria | 100957 |
| 58 | Ga0207695_10032232 | 3300025913 | Bacteria | 5737 |
| 59 | Ga0207671_10020035 | 3300025914 | Bacteria | 5101 |
| 60 | Ga0207693_10024372 | 3300025915 | Bacteria | 4801 |
| 61 | Ga0207663_10026858 | 3300025916 | Bacteria | 3346 |
| 62 | Ga0207662_10034967 | 3300025918 | Bacteria | 2933 |
| 63 | Ga0207657_10013666 | 3300025919 | Bacteria | 7952 |
| 64 | Ga0207646_10057076 | 3300025922 | Bacteria | 3488 |
| 65 | Ga0207646_10101113 | 3300025922 | Bacteria | 2584 |
| 66 | Ga0207650_10007629 | 3300025925 | Bacteria | 7370 |
| 67 | Ga0207659_10046899 | 3300025926 | Bacteria | 3054 |
| 68 | Ga0207659_10050286 | 3300025926 | Bacteria | 2961 |
| 69 | Ga0207687_10083120 | 3300025927 | Bacteria | 2317 |
| 70 | Ga0207687_10098796 | 3300025927 | Bacteria | 2144 |
| 71 | Ga0207700_10039256 | 3300025928 | Bacteria | 3445 |
| 72 | Ga0207644_10002868 | 3300025931 | Bacteria | 11112 |
| 73 | Ga0207690_10012050 | 3300025932 | Bacteria | 5169 |
| 74 | Ga0207706_10074988 | 3300025933 | Bacteria | 2974 |
| 75 | Ga0207706_10084314 | 3300025933 | Bacteria | 2794 |
| 76 | Ga0207665_10015845 | 3300025939 | Bacteria | 4948 |
| 77 | Ga0207661_10087159 | 3300025944 | Bacteria | 2592 |
| 78 | Ga0207703_10009144 | 3300026035 | Bacteria | 7799 |
| 79 | Ga0207678_10012457 | 3300026067 | Bacteria | 7467 |
| 80 | Ga0207641_10006524 | 3300026088 | Bacteria | 9815 |
| 81 | Ga0207641_10010463 | 3300026088 | Bacteria | 7620 |
| 82 | Ga0207683_10036113 | 3300026121 | Bacteria | 4300 |
| 83 | Ga0209588_1000026 | 3300027671 | Bacteria | 81177 |
| 84 | Ga0207428_10008492 | 3300027907 | Bacteria | 9275 |
| 85 | Ga0268266_10000046 | 3300028379 | Bacteria | 312745 |
| 86 | Ga0268266_10042514 | 3300028379 | Bacteria | 3882 |
| 87 | Ga0268264_10004813 | 3300028381 | Bacteria | 11451 |
| 88 | Ga0265319_1003894 | 3300028563 | Bacteria | 7605 |
| 89 | Ga0265318_10000397 | 3300028577 | Bacteria | 34040 |
| 90 | Ga0265338_10001436 | 3300028800 | Bacteria | 38680 |
| 91 | Ga0307511_10036669 | 3300030521 | Bacteria | 4252 |
| 92 | Ga0265760_10004195 | 3300031090 | Bacteria | 4148 |
| 93 | Ga0265330_10007890 | 3300031235 | Bacteria | 5158 |
| 94 | Ga0265328_10015643 | 3300031239 | Bacteria | 2968 |
| 95 | Ga0265320_10000311 | 3300031240 | Bacteria | 39964 |
| 96 | Ga0265325_10010724 | 3300031241 | Bacteria | 5288 |
| 97 | Ga0265325_10033025 | 3300031241 | Bacteria | 2760 |
| 98 | Ga0265329_10004122 | 3300031242 | Bacteria | 6152 |
| 99 | Ga0265339_10002318 | 3300031249 | Bacteria | 13706 |
| 100 | Ga0265331_10000215 | 3300031250 | Bacteria | 69639 |
| 101 | Ga0265316_10005392 | 3300031344 | Bacteria | 12439 |
| 102 | Ga0265316_10008095 | 3300031344 | Bacteria | 9797 |
| 103 | Ga0265316_10027935 | 3300031344 | Bacteria | 4661 |
| 104 | Ga0265316_10034450 | 3300031344 | Bacteria | 4113 |
| 105 | Ga0265316_10039060 | 3300031344 | Bacteria | 3815 |
| 106 | Ga0265316_10109739 | 3300031344 | Bacteria | 2090 |
| 107 | Ga0307513_10000178 | 3300031456 | Bacteria | 91751 |
| 108 | Ga0265313_10004008 | 3300031595 | Bacteria | 11528 |
| 109 | Ga0316575_10003464 | 3300031665 | Bacteria | 5447 |
| 110 | Ga0316579_10002253 | 3300031691 | Bacteria | 7281 |
| 111 | Ga0265342_10001710 | 3300031712 | Bacteria | 20077 |
| 112 | Ga0316576_10002858 | 3300031727 | Bacteria | 9958 |
| 113 | Ga0316578_10007130 | 3300031728 | Bacteria | 5578 |
| 114 | Ga0307516_10052962 | 3300031730 | Bacteria | 3971 |
| 115 | Ga0307516_10076003 | 3300031730 | Bacteria | 3212 |
| 116 | Ga0316577_10008116 | 3300031733 | Bacteria | 5613 |
| 117 | Ga0373956_0021989 | 3300035119 | Bacteria | 2725 |
| 118 | Ga0373957_0016801 | 3300035120 | Bacteria | 2540 |
| 119 | Ga0373935_0013839 | 3300035692 | Bacteria | 4870 |
| 120 | Ga0373933_0000061 | 3300035724 | Bacteria | 65319 |
| 121 | Ga0373947_0029574 | 3300035725 | Bacteria | 3215 |
| 122 | Ga0373937_0000025 | 3300036401 | Bacteria | 125685 |
| 123 | Ga0373937_0005647 | 3300036401 | Bacteria | 10740 |
| 124 | Ga0316582_0068099 | 3300036647 | Bacteria | 2298 |
| 125 | Ga0373925_0045032 | 3300037068 | Bacteria | 3277 |
| 126 | Ga0395899_0000020 | 3300037312 | Bacteria | 404354 |
| 127 | Ga0395900_0067991 | 3300037418 | Bacteria | 3661 |
| 128 | Ga0395898_0000005 | 3300037466 | Bacteria | 621247 |
| 129 | Ga0436364_1271488 | 3300037853 | Bacteria | 14707 |
| 130 | Ga0395901_0019845 | 3300038443 | Bacteria | 6875 |
| 131 | Ga0451577_0000448 | 3300042876 | Bacteria | 72373 |
| 132 | Ga0451577_0029009 | 3300042876 | Bacteria | 5003 |
| 133 | Ga0451577_0096553 | 3300042876 | Bacteria | 2638 |
| 134 | Ga0453684_0000696 | 3300044712 | Bacteria | 119520 |
| 135 | Ga0453684_0000992 | 3300044712 | Bacteria | 92625 |
| 136 | Ga0466971_0000011 | 3300044719 | Bacteria | 101185 |
| 137 | Ga0466967_0120189 | 3300045976 | Bacteria | 2426 |
| 138 | Ga0495592_0004300 | 3300046454 | Bacteria | 10413 |
| 139 | Ga0495638_0002012 | 3300046460 | Bacteria | 17353 |
| 140 | Ga0495651_0000327 | 3300046462 | Bacteria | 36961 |
| 141 | Ga0495651_0001472 | 3300046462 | Bacteria | 18221 |
| 142 | Ga0495651_0014763 | 3300046462 | Bacteria | 6040 |
| 143 | Ga0495651_0030271 | 3300046462 | Bacteria | 4221 |
| 144 | Ga0495653_0018939 | 3300046463 | Bacteria | 5586 |
| 145 | Ga0495653_0084268 | 3300046463 | Bacteria | 2341 |
| 146 | Ga0495650_0000262 | 3300046471 | Bacteria | 101769 |
| 147 | Ga0495580_0015523 | 3300046472 | Bacteria | 5741 |
| 148 | Ga0495608_0004798 | 3300046511 | Bacteria | 9667 |
| 149 | Ga0495610_0000796 | 3300046512 | Bacteria | 29585 |
| 150 | Ga0495618_0005173 | 3300046514 | Bacteria | 7972 |
| 151 | Ga0495628_0000133 | 3300046516 | Bacteria | 63350 |
| 152 | Ga0495628_0023673 | 3300046516 | Bacteria | 5038 |
| 153 | Ga0495628_0042264 | 3300046516 | Bacteria | 3636 |
| 154 | Ga0495628_0066678 | 3300046516 | Bacteria | 2813 |
| 155 | Ga0495630_0034023 | 3300046517 | Bacteria | 3802 |
| 156 | Ga0495630_0068006 | 3300046517 | Bacteria | 2678 |
| 157 | Ga0495652_0001317 | 3300046529 | Bacteria | 27636 |
| 158 | Ga0495652_0032438 | 3300046529 | Bacteria | 4568 |
| 159 | Ga0495652_0054764 | 3300046529 | Bacteria | 3395 |
| 160 | Ga0495654_0000039 | 3300046530 | Bacteria | 185363 |
| 161 | Ga0495640_0060243 | 3300046533 | Bacteria | 2582 |
| 162 | Ga0495587_0000523 | 3300046536 | Bacteria | 26626 |
| 163 | Ga0495587_0000713 | 3300046536 | Bacteria | 22252 |
| 164 | Ga0495587_0052118 | 3300046536 | Bacteria | 2415 |
| 165 | Ga0495645_0011260 | 3300046543 | Bacteria | 6289 |
| 166 | Ga0495645_0015521 | 3300046543 | Bacteria | 5418 |
| 167 | Ga0495645_0043835 | 3300046543 | Bacteria | 3263 |
| 168 | Ga0495667_0000662 | 3300046559 | Bacteria | 22013 |
| 169 | Ga0495667_0001017 | 3300046559 | Bacteria | 18126 |
| 170 | Ga0495667_0042529 | 3300046559 | Bacteria | 3013 |
| 171 | Ga0495625_0006847 | 3300046660 | Bacteria | 10067 |
| 172 | Ga0495625_0012148 | 3300046660 | Bacteria | 6987 |
| 173 | Ga0495625_0017967 | 3300046660 | Bacteria | 5527 |
| 174 | Ga0495657_0011420 | 3300046675 | Bacteria | 6639 |
| 175 | Ga0495657_0040721 | 3300046675 | Bacteria | 3184 |
| 176 | Ga0495599_0000937 | 3300046678 | Bacteria | 16281 |
| 177 | Ga0495599_0019792 | 3300046678 | Bacteria | 4192 |
| 178 | Ga0495623_0012338 | 3300046679 | Bacteria | 5533 |
| 179 | Ga0495623_0015874 | 3300046679 | Bacteria | 4869 |
| 180 | Ga0495623_0017541 | 3300046679 | Bacteria | 4624 |
| 181 | Ga0495646_0006951 | 3300046680 | Bacteria | 7183 |
| 182 | Ga0495646_0031051 | 3300046680 | Bacteria | 3333 |
| 183 | Ga0495600_0037759 | 3300046809 | Bacteria | 3141 |
| 184 | Ga0495604_0001509 | 3300047317 | Bacteria | 19146 |
| 185 | Ga0495604_0037658 | 3300047317 | Bacteria | 3808 |
| 186 | Ga0495674_0008252 | 3300047319 | Bacteria | 9935 |
| 187 | Ga0495674_0022214 | 3300047319 | Bacteria | 5851 |
| 188 | Ga0495672_0000266 | 3300047320 | Bacteria | 72321 |
| 189 | Ga0495680_0000136 | 3300047322 | Bacteria | 73375 |
| 190 | Ga0495680_0004538 | 3300047322 | Bacteria | 13271 |
| 191 | Ga0495675_0002863 | 3300047444 | Bacteria | 10344 |
| 192 | Ga0495675_0056251 | 3300047444 | Bacteria | 2494 |
| 193 | Ga0495684_0003463 | 3300047471 | Bacteria | 12347 |
| 194 | Ga0495684_0003988 | 3300047471 | Bacteria | 11514 |
| 195 | Ga0495684_0024176 | 3300047471 | Bacteria | 4676 |
| 196 | Ga0495686_0004183 | 3300047472 | Bacteria | 11992 |
| 197 | Ga0495602_0021076 | 3300048088 | Bacteria | 6424 |
| 198 | Ga0495602_0026552 | 3300048088 | Bacteria | 5582 |
| 199 | Ga0496102_0095232 | 3300048905 | Bacteria | 2759 |
| 200 | Ga0496104_0048573 | 3300048907 | Bacteria | 4000 |
| 201 | Ga0496107_0002274 | 3300048910 | Bacteria | 12394 |
| 202 | Ga0496113_0069553 | 3300048916 | Bacteria | 2674 |
| 203 | Ga0496114_0012717 | 3300048917 | Bacteria | 6743 |
| 204 | Ga0496121_0007681 | 3300048924 | Bacteria | 12952 |
| 205 | Ga0501031_0000102 | 3300049568 | Bacteria | 45183 |
| 206 | Ga0501033_0000020 | 3300049570 | Bacteria | 192214 |
| 207 | Ga0501034_0160924 | 3300049571 | Bacteria | 2216 |
| 208 | Ga0501036_0009934 | 3300049572 | Bacteria | 7836 |
| 209 | Ga0501037_0000010 | 3300049573 | Bacteria | 200115 |
| 210 | Ga0501038_0012306 | 3300049574 | Bacteria | 7816 |
| 211 | Ga0501043_0001177 | 3300049579 | Bacteria | 23000 |
| 212 | Ga0501043_0001434 | 3300049579 | Bacteria | 20831 |
| 213 | Ga0501047_0001591 | 3300049581 | Bacteria | 22152 |
| 214 | Ga0501070_0000571 | 3300049586 | Bacteria | 33604 |
| 215 | Ga0501070_0034732 | 3300049586 | Bacteria | 4215 |
| 216 | Ga0501070_0058853 | 3300049586 | Bacteria | 3185 |
| 217 | Ga0501083_0005616 | 3300049744 | Bacteria | 8879 |
| 218 | Ga0501035_0000001 | 3300049822 | Bacteria | 1037138 |
| 219 | Ga0501044_0000265 | 3300049823 | Bacteria | 66253 |
| 220 | Ga0501044_0120105 | 3300049823 | Bacteria | 2630 |
| 221 | nmdc:mga06r32_4984_c1 | 3300050510 | Bacteria | 11957 |
| 222 | Ga0495601_0009394 | 3300053077 | Bacteria | 5784 |
| 223 | Ga0495601_0051103 | 3300053077 | Bacteria | 2609 |
| 224 | Ga0495612_0010164 | 3300053078 | Bacteria | 3806 |
| 225 | Ga0500635_0009721 | 3300053080 | Bacteria | 2677 |
| 226 | Ga0495619_0029014 | 3300053085 | Bacteria | 3573 |
| 227 | Ga0500566_0022640 | 3300053094 | Bacteria | 3691 |
| 228 | Ga0500555_000020 | 3300053103 | Bacteria | 172742 |
| 229 | Ga0500642_0005987 | 3300053130 | Bacteria | 3970 |
| 230 | Ga0500559_0000068 | 3300053136 | Bacteria | 82896 |
| 231 | Ga0500568_0018583 | 3300053139 | Bacteria | 3038 |
| 232 | Ga0466962_0000019 | 3300061719 | Bacteria | 94988 |
| 233 | 2526060781 | 2524614857 | Bacteria | 4146328 |
| 234 | 2643748155 | 2643221545 | Bacteria | 5083237 |
| 235 | 2644506837 | 2643221691 | Bacteria | 5093099 |
| 236 | 2740062249 | 2739367875 | Bacteria | 4157290 |
| 237 | 2787506408 | 2786546548 | Bacteria | 4745694 |
| 238 | Ga0105240_10017233 | |||
| 239 | Ga0065704_10076028 | |||
| 240 | Ga0065715_10107871 | |||
| 241 | Ga0065707_10116922 | |||
| 242 | Ga0070670_100003629 | |||
| 243 | Ga0068869_100044175 | |||
| 244 | Ga0070660_100015588 | |||
| 245 | Ga0070675_100072387 | |||
| 246 | Ga0070675_100081148 | |||
| 247 | Ga0070671_100002062 | |||
| 248 | Ga0070673_100059406 | |||
| 249 | Ga0070709_10045061 | |||
| 250 | Ga0070708_100000950 | |||
| 251 | Ga0070708_100099706 | |||
| 252 | Ga0070681_10021508 | |||
| 253 | Ga0070706_100001169 | |||
| 254 | Ga0070706_100008866 | |||
| 255 | Ga0070707_100005933 | |||
| 256 | Ga0070707_100012562 | |||
| 257 | Ga0070707_100015796 | |||
| 258 | Ga0070707_100016753 | |||
| 259 | Ga0070707_100036177 | |||
| 260 | Ga0070698_100003606 | |||
| 261 | Ga0070684_100045525 | |||
| 262 | Ga0070697_100001381 | |||
| 263 | Ga0070665_100000037 | |||
| 264 | Ga0070665_100043102 | |||
| 265 | Ga0070665_100182764 | |||
| 266 | Ga0068863_100015271 | |||
| 267 | Ga0068858_100003247 | |||
| 268 | Ga0068858_100019856 | |||
| 269 | Ga0068860_100021799 | |||
| 270 | Ga0081455_10000953 | |||
| 271 | Ga0081455_10056255 | |||
| 272 | Ga0081455_10103688 | |||
| 273 | Ga0081538_10005028 | |||
| 274 | Ga0081538_10007566 | |||
| 275 | Ga0070717_10023719 | |||
| 276 | Ga0099794_10000024 | |||
| 277 | Ga0111539_10016181 | |||
| 278 | Ga0105245_10003026 | |||
| 279 | Ga0105237_10034665 | |||
| 280 | Ga0105249_10024524 | |||
| 281 | Ga0157369_10007025 | |||
| 282 | Ga0157374_10000028 | |||
| 283 | Ga0157374_10005749 | |||
| 284 | Ga0157378_10000963 | |||
| 285 | Ga0157375_10001269 | |||
| 286 | Ga0157379_10150956 | |||
| 287 | Ga0157376_10051845 | |||
| 288 | Ga0213876_10006004 | |||
| 289 | Ga0207666_1000480 | |||
| 290 | Ga0209256_1000897 | |||
| 291 | Ga0207697_10002055 | |||
| 292 | Ga0207697_10002164 | |||
| 293 | Ga0207697_10013724 | |||
| 294 | Ga0207684_10000182 | |||
| 295 | Ga0207695_10032232 | |||
| 296 | Ga0207671_10020035 | |||
| 297 | Ga0207693_10024372 | |||
| 298 | Ga0207663_10026858 | |||
| 299 | Ga0207662_10034967 | |||
| 300 | Ga0207657_10013666 | |||
| 301 | Ga0207646_10057076 | |||
| 302 | Ga0207646_10101113 | |||
| 303 | Ga0207650_10007629 | |||
| 304 | Ga0207659_10046899 | |||
| 305 | Ga0207659_10050286 | |||
| 306 | Ga0207687_10083120 | |||
| 307 | Ga0207687_10098796 | |||
| 308 | Ga0207700_10039256 | |||
| 309 | Ga0207644_10002868 | |||
| 310 | Ga0207690_10012050 | |||
| 311 | Ga0207706_10074988 | |||
| 312 | Ga0207706_10084314 | |||
| 313 | Ga0207665_10015845 | |||
| 314 | Ga0207661_10087159 | |||
| 315 | Ga0207703_10009144 | |||
| 316 | Ga0207678_10012457 | |||
| 317 | Ga0207641_10006524 | |||
| 318 | Ga0207641_10010463 | |||
| 319 | Ga0207683_10036113 | |||
| 320 | Ga0209588_1000026 | |||
| 321 | Ga0207428_10008492 | |||
| 322 | Ga0268266_10000046 | |||
| 323 | Ga0268266_10042514 | |||
| 324 | Ga0268264_10004813 | |||
| 325 | Ga0265319_1003894 | |||
| 326 | Ga0265318_10000397 | |||
| 327 | Ga0265338_10001436 | |||
| 328 | Ga0307511_10036669 | |||
| 329 | Ga0265760_10004195 | |||
| 330 | Ga0265330_10007890 | |||
| 331 | Ga0265328_10015643 | |||
| 332 | Ga0265320_10000311 | |||
| 333 | Ga0265325_10010724 | |||
| 334 | Ga0265325_10033025 | |||
| 335 | Ga0265329_10004122 | |||
| 336 | Ga0265339_10002318 | |||
| 337 | Ga0265331_10000215 | |||
| 338 | Ga0265316_10005392 | |||
| 339 | Ga0265316_10008095 | |||
| 340 | Ga0265316_10027935 | |||
| 341 | Ga0265316_10034450 | |||
| 342 | Ga0265316_10039060 | |||
| 343 | Ga0265316_10109739 | |||
| 344 | Ga0307513_10000178 | |||
| 345 | Ga0265313_10004008 | |||
| 346 | Ga0316575_10003464 | |||
| 347 | Ga0316579_10002253 | |||
| 348 | Ga0265342_10001710 | |||
| 349 | Ga0316576_10002858 | |||
| 350 | Ga0316578_10007130 | |||
| 351 | Ga0307516_10052962 | |||
| 352 | Ga0307516_10076003 | |||
| 353 | Ga0316577_10008116 | |||
| 354 | Ga0373956_0021989 | |||
| 355 | Ga0373957_0016801 | |||
| 356 | Ga0373935_0013839 | |||
| 357 | Ga0373933_0000061 | |||
| 358 | Ga0373947_0029574 | |||
| 359 | Ga0373937_0000025 | |||
| 360 | Ga0373937_0005647 | |||
| 361 | Ga0316582_0068099 | |||
| 362 | Ga0373925_0045032 | |||
| 363 | Ga0395899_0000020 | |||
| 364 | Ga0395900_0067991 | |||
| 365 | Ga0395898_0000005 | |||
| 366 | Ga0436364_1271488 | |||
| 367 | Ga0395901_0019845 | |||
| 368 | Ga0451577_0000448 | |||
| 369 | Ga0451577_0029009 | |||
| 370 | Ga0451577_0096553 | |||
| 371 | Ga0453684_0000696 | |||
| 372 | Ga0453684_0000992 | |||
| 373 | Ga0466971_0000011 | |||
| 374 | Ga0466967_0120189 | |||
| 375 | Ga0495592_0004300 | |||
| 376 | Ga0495638_0002012 | |||
| 377 | Ga0495651_0000327 | |||
| 378 | Ga0495651_0001472 | |||
| 379 | Ga0495651_0014763 | |||
| 380 | Ga0495651_0030271 | |||
| 381 | Ga0495653_0018939 | |||
| 382 | Ga0495653_0084268 | |||
| 383 | Ga0495650_0000262 | |||
| 384 | Ga0495580_0015523 | |||
| 385 | Ga0495608_0004798 | |||
| 386 | Ga0495610_0000796 | |||
| 387 | Ga0495618_0005173 | |||
| 388 | Ga0495628_0000133 | |||
| 389 | Ga0495628_0023673 | |||
| 390 | Ga0495628_0042264 | |||
| 391 | Ga0495628_0066678 | |||
| 392 | Ga0495630_0034023 | |||
| 393 | Ga0495630_0068006 | |||
| 394 | Ga0495652_0001317 | |||
| 395 | Ga0495652_0032438 | |||
| 396 | Ga0495652_0054764 | |||
| 397 | Ga0495654_0000039 | |||
| 398 | Ga0495640_0060243 | |||
| 399 | Ga0495587_0000523 | |||
| 400 | Ga0495587_0000713 | |||
| 401 | Ga0495587_0052118 | |||
| 402 | Ga0495645_0011260 | |||
| 403 | Ga0495645_0015521 | |||
| 404 | Ga0495645_0043835 | |||
| 405 | Ga0495667_0000662 | |||
| 406 | Ga0495667_0001017 | |||
| 407 | Ga0495667_0042529 | |||
| 408 | Ga0495625_0006847 | |||
| 409 | Ga0495625_0012148 | |||
| 410 | Ga0495625_0017967 | |||
| 411 | Ga0495657_0011420 | |||
| 412 | Ga0495657_0040721 | |||
| 413 | Ga0495599_0000937 | |||
| 414 | Ga0495599_0019792 | |||
| 415 | Ga0495623_0012338 | |||
| 416 | Ga0495623_0015874 | |||
| 417 | Ga0495623_0017541 | |||
| 418 | Ga0495646_0006951 | |||
| 419 | Ga0495646_0031051 | |||
| 420 | Ga0495600_0037759 | |||
| 421 | Ga0495604_0001509 | |||
| 422 | Ga0495604_0037658 | |||
| 423 | Ga0495674_0008252 | |||
| 424 | Ga0495674_0022214 | |||
| 425 | Ga0495672_0000266 | |||
| 426 | Ga0495680_0000136 | |||
| 427 | Ga0495680_0004538 | |||
| 428 | Ga0495675_0002863 | |||
| 429 | Ga0495675_0056251 | |||
| 430 | Ga0495684_0003463 | |||
| 431 | Ga0495684_0003988 | |||
| 432 | Ga0495684_0024176 | |||
| 433 | Ga0495686_0004183 | |||
| 434 | Ga0495602_0021076 | |||
| 435 | Ga0495602_0026552 | |||
| 436 | Ga0496102_0095232 | |||
| 437 | Ga0496104_0048573 | |||
| 438 | Ga0496107_0002274 | |||
| 439 | Ga0496113_0069553 | |||
| 440 | Ga0496114_0012717 | |||
| 441 | Ga0496121_0007681 | |||
| 442 | Ga0501031_0000102 | |||
| 443 | Ga0501033_0000020 | |||
| 444 | Ga0501034_0160924 | |||
| 445 | Ga0501036_0009934 | |||
| 446 | Ga0501037_0000010 | |||
| 447 | Ga0501038_0012306 | |||
| 448 | Ga0501043_0001177 | |||
| 449 | Ga0501043_0001434 | |||
| 450 | Ga0501047_0001591 | |||
| 451 | Ga0501070_0000571 | |||
| 452 | Ga0501070_0034732 | |||
| 453 | Ga0501070_0058853 | |||
| 454 | Ga0501083_0005616 | |||
| 455 | Ga0501035_0000001 | |||
| 456 | Ga0501044_0000265 | |||
| 457 | Ga0501044_0120105 | |||
| 458 | nmdc:mga06r32_4984_c1 | |||
| 459 | Ga0495601_0009394 | |||
| 460 | Ga0495601_0051103 | |||
| 461 | Ga0495612_0010164 | |||
| 462 | Ga0500635_0009721 | |||
| 463 | Ga0495619_0029014 | |||
| 464 | Ga0500566_0022640 | |||
| 465 | Ga0500555_000020 | |||
| 466 | Ga0500642_0005987 | |||
| 467 | Ga0500559_0000068 | |||
| 468 | Ga0500568_0018583 | |||
| 469 | Ga0466962_0000019 | |||
| 470 | 2526060781 | |||
| 471 | 2643748155 | |||
| 472 | 2644506837 | |||
| 473 | 2740062249 | |||
| 474 | 2787506408 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8g0u-assembly1.cif.gz_C | crystal structure of acetyl-coa synthetase in complex with an isopropyl ester amp inhibitor from cryptococcus neoformans h99 | 0.9681 | 61 | 496 |
| 7kdn-assembly3.cif.gz_C | crystal structure of acetyl-coa synthetase in complex with adenosine-5'-propylphosphate from aspergillus fumigatus | 0.965 | 17 | 500 |
| 8v4p-assembly1.cif.gz_C | crystal structure of acetyl-coa synthetase 2 in complex with adenosine-5'-allylphosphate from candida albicans | 0.9591 | 12 | 500 |
| 1ry2-assembly1.cif.gz_A | crystal structure of yeast acetyl-coenzyme a synthetase in complex with amp | 0.9552 | 36 | 609 |
| 5vpv-assembly3.cif.gz_C | crystal structure of apo cryptococcus neoformans h99 acetyl-coa synthetase with an acetylated active site lysine | 0.9543 | 17 | 500 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_F1QQH3_177_548_3.40.50.12780 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain | 0.9789 | 148 | 501 | 3.40.50.12780 |
| 1nnmA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain | 0.9785 | 17 | 501 | 3.40.50.12780 |
| af_P9WQD1_15_525_3.40.50.12780 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain | 0.9755 | 22 | 501 | 3.40.50.12780 |
| af_C6KTB4_488_811_3.40.50.12780 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain | 0.9697 | 205 | 501 | 3.40.50.12780 |
| 3etcA02 | Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain | 0.9649 | 501 | 585 | 3.30.300.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2X2V4B8-F1-model_v4 | Acetyl-CoA synthetase (EC 6.2.1.1) | 0.9921 | 100 | 315 |
GO:0003987
GO:0005829 GO:0006085 |
| AF-A0A2M8Q7F5-F1-model_v4 | Acetyl-coenzyme A synthetase (EC 6.2.1.1) | 0.9819 | 114 | 263 |
GO:0003987
GO:0005829 GO:0006085 |
| AF-Q6AQ19-F1-model_v4 | Acetate--CoA ligase (EC 6.2.1.1) | 0.9815 | 1 | 501 |
GO:0003987
GO:0005829 GO:0016208 GO:0019427 |
| AF-A0A376FIT8-F1-model_v4 | Acetyl-CoA synthetase (EC 6.2.1.1) | 0.98 | 55 | 393 |
GO:0003987
GO:0005829 GO:0006085 |
| AF-A0A382QVT1-F1-model_v4 | acetate--CoA ligase (EC 6.2.1.1) | 0.9798 | 226 | 549 |
GO:0003987
GO:0005524 GO:0006085 |