F349459

General Info

Members Datasets Scaffolds Average Seq Length
236 178 472 283

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0006161|Ga0501032_0006161_1693_2670
Length 325
Sequence MRIINRFLEHSPHSGGNLGRRPVIPARAAAYLPTDGKEIMMTDRTKTPAGLVIEKRNWKFGRDMLPRRWWHGGDPGRTAFYNALSSTFPVGEKFFMSAVRHYREGAPEPLREQIDDFIFQESTHSREHIFFNRQARDAGYDLASSEDRAARTIAWAKRRSPIMQLAATCALEHFTAILANAVLSDSAHLAGADTEAQRMWRWHAVEEIEHKGVAYDTWLHATRNKLRILCWSIRSLAMLSAAVRFHWVIYRNTANLLAQDGKNDLATWRRLRSYLYDYPGAMRLIARGMIGYLRPGFHPWQHDDRALAKRALASLTPPLITPLPR

Samples

Sample ID Description Type Environment
1 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
4 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
5 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
6 3300001978 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6 Metagenome Rhizosphere
7 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
8 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
9 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
10 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
11 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
12 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
13 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
14 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
15 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
16 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
19 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
22 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
23 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
26 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
27 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
28 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
29 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
30 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
31 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
32 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
33 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
34 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
35 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
36 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
37 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
38 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
39 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
111 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
112 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300031010 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
114 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
115 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
116 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
117 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
118 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
119 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
120 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
121 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
122 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
123 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
124 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
125 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
126 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
127 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
128 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
129 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
130 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
131 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
132 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
133 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
134 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
135 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
136 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
137 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
138 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
139 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
140 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
141 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
152 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
169 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
170 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
171 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
172 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
173 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
174 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
175 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
176 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
177 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
178 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.46
Metatranscriptomes 1.27
Isolates 1.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.32
Nodule 0
Rhizoplane 2.97
Rhizosphere 84.32
Stem 0
Stem Tuber 0
Unclassified 1.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501032_0006161 3300049569 Bacteria 8827
2 SwRhRL3b_contig_3956261 2162886006 Unclassified 1913
3 JGI24736J21556_1000023 3300001904 Bacteria 25735
4 JGI24741J21665_1009143 3300001915 Bacteria 1833
5 JGI24752J21851_1000094 3300001976 Bacteria 11786
6 JGI24747J21853_1008417 3300001978 Bacteria 1008
7 JGI24740J21852_10010247 3300001979 Bacteria 3621
8 JGI24739J22299_10001293 3300001989 Bacteria 9413
9 JGI24737J22298_10002290 3300001990 Bacteria 6807
10 JGI24735J21928_10004282 3300002067 Bacteria 4810
11 JGI24748J21848_1000037 3300002074 Bacteria 72188
12 JGI24738J21930_10005723 3300002075 Bacteria 2958
13 JGI24034J26672_10000024 3300002239 Bacteria 114754
14 JGI24034J26672_10000025 3300002239 Bacteria 110791
15 JGI24751J29686_10011498 3300002459 Bacteria 1825
16 JGI25153J46596_10000065 3300003215 Bacteria 124645
17 Ga0055536_1000510 3300003781 Bacteria 26793
18 Ga0055531_10006903 3300003794 Bacteria 6323
19 Ga0058859_11245709 3300004798 Bacteria 1168
20 Ga0065707_10000450 3300005295 Bacteria 70667
21 Ga0065707_10086699 3300005295 Bacteria 5345
22 Ga0070658_10001464 3300005327 Bacteria 20130
23 Ga0070658_10111514 3300005327 Bacteria 2267
24 Ga0070683_100476685 3300005329 Bacteria 1191
25 Ga0070690_100000202 3300005330 Bacteria 31141
26 Ga0070666_10000007 3300005335 Bacteria 293732
27 Ga0070666_10000053 3300005335 Bacteria 97883
28 Ga0068868_100000196 3300005338 Bacteria 40318
29 Ga0068868_100069645 3300005338 Bacteria 2804
30 Ga0070660_100184411 3300005339 Bacteria 1689
31 Ga0070689_100019960 3300005340 Bacteria 4965
32 Ga0070661_100024548 3300005344 Bacteria 4324
33 Ga0070692_10219956 3300005345 Bacteria 1122
34 Ga0070669_100000009 3300005353 Bacteria 224683
35 Ga0070669_100133004 3300005353 Bacteria 1911
36 Ga0070669_100180285 3300005353 Bacteria 1652
37 Ga0070671_100060135 3300005355 Bacteria 3163
38 Ga0070674_100000262 3300005356 Bacteria 26193
39 Ga0070673_100019761 3300005364 Bacteria 4844
40 Ga0070688_100001083 3300005365 Bacteria 13631
41 Ga0070659_100008979 3300005366 Bacteria 7330
42 Ga0070714_100014049 3300005435 Bacteria 6424
43 Ga0070678_100000992 3300005456 Bacteria 14678
44 Ga0070662_100204227 3300005457 Bacteria 1569
45 Ga0068867_100150212 3300005459 Bacteria 1829
46 Ga0070685_10000120 3300005466 Bacteria 50329
47 Ga0070685_10242030 3300005466 Bacteria 1191
48 Ga0070672_100012043 3300005543 Bacteria 6053
49 Ga0070686_100000050 3300005544 Bacteria 97879
50 Ga0070665_100000004 3300005548 Bacteria 785500
51 Ga0070665_100000049 3300005548 Bacteria 261123
52 Ga0068855_100000063 3300005563 Bacteria 131058
53 Ga0068852_100046696 3300005616 Bacteria 3691
54 Ga0068852_100134505 3300005616 Bacteria 2281
55 Ga0068852_100219136 3300005616 Bacteria 1809
56 Ga0068859_100029559 3300005617 Bacteria 5499
57 Ga0068864_100007740 3300005618 Bacteria 8853
58 Ga0068861_100004511 3300005719 Bacteria 9348
59 Ga0068861_100077735 3300005719 Bacteria 2589
60 Ga0068851_10053002 3300005834 Bacteria 2064
61 Ga0068863_100000010 3300005841 Bacteria 237758
62 Ga0068858_100048726 3300005842 Bacteria 3924
63 Ga0068858_100279326 3300005842 Bacteria 1590
64 Ga0068860_100000189 3300005843 Bacteria 97880
65 Ga0081539_10015852 3300005985 Bacteria 5437
66 Ga0070712_100002967 3300006175 Bacteria 10502
67 Ga0097621_100271122 3300006237 Bacteria 1491
68 Ga0075430_100014523 3300006846 Bacteria 6709
69 Ga0097620_100029558 3300006931 Bacteria 5499
70 Ga0105240_10000079 3300009093 Bacteria 195849
71 Ga0105240_10022997 3300009093 Bacteria 8255
72 Ga0105240_10337879 3300009093 Bacteria 1712
73 Ga0105247_10010079 3300009101 Bacteria 5726
74 Ga0105247_10130700 3300009101 Bacteria 1636
75 Ga0105243_10002024 3300009148 Bacteria 17214
76 Ga0105241_10014247 3300009174 Bacteria 5824
77 Ga0105241_10113515 3300009174 Bacteria 2172
78 Ga0105248_10000013 3300009177 Bacteria 328864
79 Ga0105248_10027608 3300009177 Bacteria 6321
80 Ga0105238_10000972 3300009551 Bacteria 29340
81 Ga0105238_10020223 3300009551 Bacteria 6776
82 Ga0105249_10000157 3300009553 Bacteria 83216
83 Ga0105239_10000376 3300010375 Bacteria 65247
84 Ga0105239_10027656 3300010375 Bacteria 6240
85 Ga0105246_10295144 3300011119 Bacteria 1306
86 Ga0157373_10001370 3300013100 Bacteria 18709
87 Ga0157370_10036925 3300013104 Bacteria 4739
88 Ga0157369_10007235 3300013105 Bacteria 12785
89 Ga0157369_10023012 3300013105 Bacteria 6946
90 Ga0157374_10062917 3300013296 Bacteria 3479
91 Ga0163162_10005226 3300013306 Bacteria 12516
92 Ga0157380_10000740 3300014326 Bacteria 20395
93 Ga0157380_10002438 3300014326 Bacteria 12534
94 Ga0157380_10021924 3300014326 Bacteria 4797
95 Ga0157379_10011941 3300014968 Bacteria 7589
96 Ga0157376_10231934 3300014969 Bacteria 1715
97 Ga0163161_10000020 3300017792 Bacteria 214642
98 Ga0209676_1000085 3300025292 Bacteria 273425
99 Ga0209676_1002099 3300025292 Bacteria 15389
100 Ga0209676_1002536 3300025292 Bacteria 12713
101 Ga0209676_1033390 3300025292 Bacteria 1534
102 Ga0209758_1000007 3300025297 Bacteria 1270410
103 Ga0209050_1016762 3300025298 Bacteria 2971
104 Ga0209257_1000330 3300025304 Bacteria 99167
105 Ga0209257_1004946 3300025304 Bacteria 9775
106 Ga0207680_10000017 3300025903 Bacteria 97899
107 Ga0207647_10001726 3300025904 Bacteria 16752
108 Ga0207654_10009517 3300025911 Bacteria 4937
109 Ga0207695_10005689 3300025913 Bacteria 16443
110 Ga0207695_10041275 3300025913 Bacteria 4939
111 Ga0207671_10114551 3300025914 Bacteria 2055
112 Ga0207693_10005586 3300025915 Bacteria 10452
113 Ga0207681_10000020 3300025923 Bacteria 240498
114 Ga0207681_10056340 3300025923 Bacteria 2681
115 Ga0207694_10000470 3300025924 Bacteria 36877
116 Ga0207694_10016124 3300025924 Bacteria 5638
117 Ga0207664_10010592 3300025929 Bacteria 6516
118 Ga0207644_10232070 3300025931 Bacteria 1466
119 Ga0207690_10357635 3300025932 Bacteria 1156
120 Ga0207709_10000109 3300025935 Bacteria 128086
121 Ga0207670_10056854 3300025936 Bacteria 2651
122 Ga0207669_10000048 3300025937 Bacteria 60914
123 Ga0207711_10000003 3300025941 Bacteria 1042791
124 Ga0207711_10000005 3300025941 Bacteria 822972
125 Ga0207711_10000015 3300025941 Bacteria 494097
126 Ga0207711_10006161 3300025941 Bacteria 10137
127 Ga0207667_10000041 3300025949 Bacteria 272265
128 Ga0207667_10021852 3300025949 Bacteria 7081
129 Ga0207651_10059232 3300025960 Bacteria 2651
130 Ga0207712_10000099 3300025961 Bacteria 97890
131 Ga0207677_10047664 3300026023 Bacteria 2879
132 Ga0207703_10004625 3300026035 Bacteria 11249
133 Ga0207703_10302532 3300026035 Bacteria 1459
134 Ga0207678_10023926 3300026067 Bacteria 5341
135 Ga0207702_10003500 3300026078 Bacteria 14313
136 Ga0207641_10000171 3300026088 Bacteria 90550
137 Ga0207648_10189900 3300026089 Bacteria 1820
138 Ga0207676_10001404 3300026095 Bacteria 17924
139 Ga0207675_100003758 3300026118 Bacteria 14792
140 Ga0207675_100043857 3300026118 Bacteria 4178
141 Ga0207683_10000619 3300026121 Bacteria 32637
142 Ga0207698_10001620 3300026142 Bacteria 13098
143 Ga0207698_10034537 3300026142 Bacteria 3687
144 Ga0209974_10044114 3300027876 Bacteria 1487
145 Ga0268266_10000004 3300028379 Bacteria 1495817
146 Ga0268266_10000009 3300028379 Bacteria 1097737
147 Ga0268266_10000036 3300028379 Bacteria 348910
148 Ga0268264_10000023 3300028381 Bacteria 471408
149 Ga0265334_10003326 3300028573 Bacteria 7334
150 Ga0265334_10083248 3300028573 Unclassified 1176
151 Ga0265338_10000007 3300028800 Bacteria 498229
152 Ga0265338_10133806 3300028800 Bacteria 1953
153 Ga0265770_1000118 3300030878 Bacteria 9442
154 Ga0265771_1000871 3300031010 Bacteria 1288
155 Ga0265332_10126991 3300031238 Bacteria 1070
156 Ga0265325_10000001 3300031241 Bacteria 726814
157 Ga0265339_10000689 3300031249 Bacteria 26094
158 Ga0265316_10170850 3300031344 Bacteria 1622
159 Ga0307408_100254501 3300031548 Bacteria 1450
160 Ga0265313_10008249 3300031595 Bacteria 6952
161 Ga0265314_10013363 3300031711 Bacteria 6636
162 Ga0307405_10002572 3300031731 Bacteria 8053
163 Ga0307413_10065495 3300031824 Bacteria 2263
164 Ga0307410_10214214 3300031852 Bacteria 1478
165 Ga0307412_10008664 3300031911 Bacteria 5816
166 Ga0307412_10153475 3300031911 Bacteria 1702
167 Ga0307414_10001003 3300032004 Bacteria 14423
168 Ga0307414_10344203 3300032004 Bacteria 1277
169 Ga0307415_100311793 3300032126 Bacteria 1308
170 Ga0373937_0004718 3300036401 Bacteria 11591
171 Ga0439448_0072856 3300042005 Bacteria 1145
172 Ga0466967_0130291 3300045976 Bacteria 2334
173 Ga0495638_0014521 3300046460 Bacteria 5317
174 Ga0495584_0019187 3300046491 Bacteria 3473
175 Ga0495606_0008940 3300046507 Bacteria 8575
176 Ga0495643_0001568 3300046522 Bacteria 20340
177 Ga0495663_0000878 3300046525 Bacteria 10136
178 Ga0495654_0010360 3300046530 Bacteria 5072
179 Ga0495621_0002678 3300046539 Bacteria 4822
180 Ga0495621_0107008 3300046539 Bacteria 1069
181 Ga0495668_0000001 3300046616 Bacteria 1013420
182 Ga0495668_0002162 3300046616 Bacteria 16877
183 Ga0495625_0010253 3300046660 Bacteria 7770
184 Ga0495625_0055322 3300046660 Bacteria 2830
185 Ga0495659_0026972 3300046664 Bacteria 1978
186 Ga0495670_0005539 3300046691 Bacteria 6198
187 Ga0495670_0013363 3300046691 Bacteria 4039
188 Ga0495589_0021219 3300046794 Bacteria 3320
189 Ga0496102_0291631 3300048905 Bacteria 1538
190 Ga0496103_0008369 3300048906 Bacteria 6145
191 Ga0496104_0053702 3300048907 Bacteria 3808
192 Ga0496105_0179198 3300048908 Bacteria 1735
193 Ga0496106_0192940 3300048909 Bacteria 1620
194 Ga0496107_0072500 3300048910 Bacteria 2504
195 Ga0496111_0256018 3300048914 Bacteria 1299
196 Ga0496116_0006374 3300048919 Bacteria 10727
197 Ga0496117_0007811 3300048920 Bacteria 10305
198 Ga0496118_0034313 3300048921 Bacteria 4142
199 Ga0496121_0181193 3300048924 Bacteria 1520
200 Ga0496121_0321657 3300048924 Bacteria 1041
201 Ga0496125_0146783 3300048928 Bacteria 1629
202 Ga0496126_0035766 3300048929 Bacteria 4650
203 Ga0501032_0005568 3300049569 Bacteria 9340
204 Ga0501033_0000433 3300049570 Bacteria 40132
205 Ga0501034_0066768 3300049571 Bacteria 3610
206 Ga0501034_0163850 3300049571 Bacteria 2193
207 Ga0501036_0011349 3300049572 Bacteria 7373
208 Ga0501036_0118645 3300049572 Bacteria 2234
209 Ga0501037_0178743 3300049573 Bacteria 1506
210 Ga0501038_0029604 3300049574 Bacteria 4849
211 Ga0501038_0098839 3300049574 Bacteria 2433
212 Ga0501039_0061136 3300049575 Bacteria 2917
213 Ga0501043_0241837 3300049579 Bacteria 1392
214 Ga0501047_0297965 3300049581 Bacteria 1455
215 Ga0501080_0023043 3300049742 Bacteria 5774
216 Ga0501035_0005503 3300049822 Bacteria 11965
217 Ga0501035_0017899 3300049822 Bacteria 6536
218 Ga0501044_0005291 3300049823 Bacteria 14349
219 Ga0501044_0006511 3300049823 Bacteria 12903
220 nmdc:mga0qj67_11175_c1 3300050509 Bacteria 6723
221 nmdc:mga08y16_461491_c1 3300050511 Bacteria 1294
222 Ga0500592_000427 3300053116 Bacteria 7038
223 Ga0500592_001510 3300053116 Bacteria 3769
224 Ga0500655_004817 3300053133 Bacteria 2426
225 Ga0500568_0001033 3300053139 Bacteria 19043
226 Ga0500568_0029055 3300053139 Unclassified 2298
227 Ga0500588_0011208 3300053146 Bacteria 2188
228 Ga0500622_0002692 3300053156 Bacteria 12590
229 Ga0500622_0003684 3300053156 Bacteria 10054
230 Ga0500627_0000017 3300053158 Bacteria 119507
231 Ga0500627_0000578 3300053158 Bacteria 9863
232 Ga0500611_037457 3300053727 Unclassified 1044
233 Ga0501084_0000721 3300054114 Bacteria 25202
234 2852654975 2852653556 Bacteria 4050083
235 2852681686 2852680915 Bacteria 4100189
236 2882808815 2882806704 Bacteria 3007728
237 Ga0501032_0006161
238 SwRhRL3b_contig_3956261
239 JGI24736J21556_1000023
240 JGI24741J21665_1009143
241 JGI24752J21851_1000094
242 JGI24747J21853_1008417
243 JGI24740J21852_10010247
244 JGI24739J22299_10001293
245 JGI24737J22298_10002290
246 JGI24735J21928_10004282
247 JGI24748J21848_1000037
248 JGI24738J21930_10005723
249 JGI24034J26672_10000024
250 JGI24034J26672_10000025
251 JGI24751J29686_10011498
252 JGI25153J46596_10000065
253 Ga0055536_1000510
254 Ga0055531_10006903
255 Ga0058859_11245709
256 Ga0065707_10000450
257 Ga0065707_10086699
258 Ga0070658_10001464
259 Ga0070658_10111514
260 Ga0070683_100476685
261 Ga0070690_100000202
262 Ga0070666_10000007
263 Ga0070666_10000053
264 Ga0068868_100000196
265 Ga0068868_100069645
266 Ga0070660_100184411
267 Ga0070689_100019960
268 Ga0070661_100024548
269 Ga0070692_10219956
270 Ga0070669_100000009
271 Ga0070669_100133004
272 Ga0070669_100180285
273 Ga0070671_100060135
274 Ga0070674_100000262
275 Ga0070673_100019761
276 Ga0070688_100001083
277 Ga0070659_100008979
278 Ga0070714_100014049
279 Ga0070678_100000992
280 Ga0070662_100204227
281 Ga0068867_100150212
282 Ga0070685_10000120
283 Ga0070685_10242030
284 Ga0070672_100012043
285 Ga0070686_100000050
286 Ga0070665_100000004
287 Ga0070665_100000049
288 Ga0068855_100000063
289 Ga0068852_100046696
290 Ga0068852_100134505
291 Ga0068852_100219136
292 Ga0068859_100029559
293 Ga0068864_100007740
294 Ga0068861_100004511
295 Ga0068861_100077735
296 Ga0068851_10053002
297 Ga0068863_100000010
298 Ga0068858_100048726
299 Ga0068858_100279326
300 Ga0068860_100000189
301 Ga0081539_10015852
302 Ga0070712_100002967
303 Ga0097621_100271122
304 Ga0075430_100014523
305 Ga0097620_100029558
306 Ga0105240_10000079
307 Ga0105240_10022997
308 Ga0105240_10337879
309 Ga0105247_10010079
310 Ga0105247_10130700
311 Ga0105243_10002024
312 Ga0105241_10014247
313 Ga0105241_10113515
314 Ga0105248_10000013
315 Ga0105248_10027608
316 Ga0105238_10000972
317 Ga0105238_10020223
318 Ga0105249_10000157
319 Ga0105239_10000376
320 Ga0105239_10027656
321 Ga0105246_10295144
322 Ga0157373_10001370
323 Ga0157370_10036925
324 Ga0157369_10007235
325 Ga0157369_10023012
326 Ga0157374_10062917
327 Ga0163162_10005226
328 Ga0157380_10000740
329 Ga0157380_10002438
330 Ga0157380_10021924
331 Ga0157379_10011941
332 Ga0157376_10231934
333 Ga0163161_10000020
334 Ga0209676_1000085
335 Ga0209676_1002099
336 Ga0209676_1002536
337 Ga0209676_1033390
338 Ga0209758_1000007
339 Ga0209050_1016762
340 Ga0209257_1000330
341 Ga0209257_1004946
342 Ga0207680_10000017
343 Ga0207647_10001726
344 Ga0207654_10009517
345 Ga0207695_10005689
346 Ga0207695_10041275
347 Ga0207671_10114551
348 Ga0207693_10005586
349 Ga0207681_10000020
350 Ga0207681_10056340
351 Ga0207694_10000470
352 Ga0207694_10016124
353 Ga0207664_10010592
354 Ga0207644_10232070
355 Ga0207690_10357635
356 Ga0207709_10000109
357 Ga0207670_10056854
358 Ga0207669_10000048
359 Ga0207711_10000003
360 Ga0207711_10000005
361 Ga0207711_10000015
362 Ga0207711_10006161
363 Ga0207667_10000041
364 Ga0207667_10021852
365 Ga0207651_10059232
366 Ga0207712_10000099
367 Ga0207677_10047664
368 Ga0207703_10004625
369 Ga0207703_10302532
370 Ga0207678_10023926
371 Ga0207702_10003500
372 Ga0207641_10000171
373 Ga0207648_10189900
374 Ga0207676_10001404
375 Ga0207675_100003758
376 Ga0207675_100043857
377 Ga0207683_10000619
378 Ga0207698_10001620
379 Ga0207698_10034537
380 Ga0209974_10044114
381 Ga0268266_10000004
382 Ga0268266_10000009
383 Ga0268266_10000036
384 Ga0268264_10000023
385 Ga0265334_10003326
386 Ga0265334_10083248
387 Ga0265338_10000007
388 Ga0265338_10133806
389 Ga0265770_1000118
390 Ga0265771_1000871
391 Ga0265332_10126991
392 Ga0265325_10000001
393 Ga0265339_10000689
394 Ga0265316_10170850
395 Ga0307408_100254501
396 Ga0265313_10008249
397 Ga0265314_10013363
398 Ga0307405_10002572
399 Ga0307413_10065495
400 Ga0307410_10214214
401 Ga0307412_10008664
402 Ga0307412_10153475
403 Ga0307414_10001003
404 Ga0307414_10344203
405 Ga0307415_100311793
406 Ga0373937_0004718
407 Ga0439448_0072856
408 Ga0466967_0130291
409 Ga0495638_0014521
410 Ga0495584_0019187
411 Ga0495606_0008940
412 Ga0495643_0001568
413 Ga0495663_0000878
414 Ga0495654_0010360
415 Ga0495621_0002678
416 Ga0495621_0107008
417 Ga0495668_0000001
418 Ga0495668_0002162
419 Ga0495625_0010253
420 Ga0495625_0055322
421 Ga0495659_0026972
422 Ga0495670_0005539
423 Ga0495670_0013363
424 Ga0495589_0021219
425 Ga0496102_0291631
426 Ga0496103_0008369
427 Ga0496104_0053702
428 Ga0496105_0179198
429 Ga0496106_0192940
430 Ga0496107_0072500
431 Ga0496111_0256018
432 Ga0496116_0006374
433 Ga0496117_0007811
434 Ga0496118_0034313
435 Ga0496121_0181193
436 Ga0496121_0321657
437 Ga0496125_0146783
438 Ga0496126_0035766
439 Ga0501032_0005568
440 Ga0501033_0000433
441 Ga0501034_0066768
442 Ga0501034_0163850
443 Ga0501036_0011349
444 Ga0501036_0118645
445 Ga0501037_0178743
446 Ga0501038_0029604
447 Ga0501038_0098839
448 Ga0501039_0061136
449 Ga0501043_0241837
450 Ga0501047_0297965
451 Ga0501080_0023043
452 Ga0501035_0005503
453 Ga0501035_0017899
454 Ga0501044_0005291
455 Ga0501044_0006511
456 nmdc:mga0qj67_11175_c1
457 nmdc:mga08y16_461491_c1
458 Ga0500592_000427
459 Ga0500592_001510
460 Ga0500655_004817
461 Ga0500568_0001033
462 Ga0500568_0029055
463 Ga0500588_0011208
464 Ga0500622_0002692
465 Ga0500622_0003684
466 Ga0500627_0000017
467 Ga0500627_0000578
468 Ga0500611_037457
469 Ga0501084_0000721
470 2852654975
471 2852681686
472 2882808815

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10118

Metal_hydrol

Predicted metal-dependent hydrolase

54

303

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5uwz-assembly1.cif.gz_A protein 12 with aldehyde deformylating oxygenase activity from gloeobacter violaceus 0.6604 33 273
5uwz-assembly1.cif.gz_A protein 12 with aldehyde deformylating oxygenase activity from gloeobacter violaceus 0.6481 33 273
1rtw-assembly1.cif.gz_D x-ray structure of pf1337, a tena homologue from pyrococcus furiosus. northeast structural genomics research consortium (nesg) target pfr34 0.6001 44 222
5k53-assembly1.cif.gz_A crystal structures of aldehyde deformylating oxygenase from oscillatoria sp. knua011 0.5985 33 274
5k53-assembly1.cif.gz_A crystal structures of aldehyde deformylating oxygenase from oscillatoria sp. knua011 0.5894 33 274
ID Description Score Start End Superfamily
af_O33319_78_337_1.20.910.10 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.8674 16 264 1.20.910.10
af_O33319_78_337_1.20.910.10 Mainly Alpha;Up-down Bundle;Heme Oxygenase; Chain A;Heme oxygenase-like 0.8293 16 264 1.20.910.10
af_Q9W3W4_54_201_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.6685 43 179 1.20.1260.10
af_P41735_52_233_3.15.10.10 Alpha Beta;Super Roll;Bactericidal permeability-increasing protein; domain 1;Bactericidal permeability-increasing protein; domain 1 0.6548 41 215 3.15.10.10
af_Q54VB3_38_194_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.6405 38 179 1.20.1260.10
ID Description Score Start End GO Terms
AF-A0A0G3XJR5-F1-model_v4 FF domain-containing protein 0.9842 18 274
AF-A0A7W9BSI7-F1-model_v4 Metal-dependent hydrolase 0.9837 9 275
AF-A0A519NQW4-F1-model_v4 Metal-dependent hydrolase 0.9779 9 272 GO:0016787
AF-A0A6I6LG60-F1-model_v4 Metal-dependent hydrolase 0.9759 15 274 GO:0016787
AF-A0A3S2V9M7-F1-model_v4 Metal-dependent hydrolase 0.9757 15 275 GO:0016787

Map