F349457

General Info

Members Datasets Scaffolds Average Seq Length
236 113 229 220

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0349682|Ga0501031_0349682_64_795
Length 243
Sequence LARTSDIAGHHAAELGGGIVVRVLIVDDQPVVRAGVARILGPEDGFEVVAECDDGDEVVAAVMTHDPDLVLMDIRMRRVDGVSAIRRLRAEVGDEPAVLVLTTFDDDDALWGALDAGAAGFVLKDAAAEQLIAAARAVAGGAAWLDPKVAPRVLDAFRTNVVPRQRSAARLEQLTAREHDVLRLMARGATNAEIAQQLIVAEATIKTHVGAIFTKLAVRDRAAAIVYAYDHGIVGPRPESDAD

Samples

Sample ID Description Type Environment
1 2508501039 Frankia saprophytica CN3 Isolate Nodule
2 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
3 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
4 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
5 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
6 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
7 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
31 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
37 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
39 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
40 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
41 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
42 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
43 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
44 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
45 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
46 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
47 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
48 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
49 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
50 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
51 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
52 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
53 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
54 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
55 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
56 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
57 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
58 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
59 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
60 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
61 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
64 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
69 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
70 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
71 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
72 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
73 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
74 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
87 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
90 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
91 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
92 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
93 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
94 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
95 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
96 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
97 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
98 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
99 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
100 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
101 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
102 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
103 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
104 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
105 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
106 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
107 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
108 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
109 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
110 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
111 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
112 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
113 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.03
Metatranscriptomes 0
Isolates 2.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.12
Nodule 1.69
Rhizoplane 0
Rhizosphere 91.53
Stem 0
Stem Tuber 0
Unclassified 4.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10004214 3300003373 Bacteria 3500
2 JGI25407J50210_10007622 3300003373 Bacteria 2714
3 JGI25407J50210_10029681 3300003373 Bacteria 1417
4 JGI25407J50210_10036307 3300003373 Bacteria 1268
5 JGI25407J50210_10040294 3300003373 Bacteria 1197
6 JGI25407J50210_10049179 3300003373 Bacteria 1070
7 Ga0070670_100017203 3300005331 Bacteria 6202
8 Ga0070714_100236661 3300005435 Bacteria 1684
9 Ga0070714_100439414 3300005435 Bacteria 1238
10 Ga0070713_100026923 3300005436 Bacteria 4520
11 Ga0070694_100469260 3300005444 Bacteria 997
12 Ga0070663_100220511 3300005455 Bacteria 1489
13 Ga0070704_100754842 3300005549 Bacteria 866
14 Ga0068857_100260021 3300005577 Bacteria 1593
15 Ga0081455_10002594 3300005937 Bacteria 21431
16 Ga0081455_10013107 3300005937 Bacteria 8217
17 Ga0081455_10020396 3300005937 Bacteria 6241
18 Ga0081455_10114103 3300005937 Bacteria 2141
19 Ga0081455_10189049 3300005937 Bacteria 1552
20 Ga0081455_10365938 3300005937 Bacteria 1012
21 Ga0081538_10000128 3300005981 Bacteria 77546
22 Ga0081538_10000169 3300005981 Bacteria 69684
23 Ga0081538_10000762 3300005981 Bacteria 35170
24 Ga0081538_10001214 3300005981 Bacteria 27055
25 Ga0081538_10001305 3300005981 Bacteria 25806
26 Ga0081538_10002526 3300005981 Bacteria 17829
27 Ga0081538_10002532 3300005981 Bacteria 17811
28 Ga0081538_10010304 3300005981 Bacteria 7674
29 Ga0081538_10010716 3300005981 Bacteria 7502
30 Ga0081538_10012850 3300005981 Bacteria 6681
31 Ga0081538_10015757 3300005981 Bacteria 5835
32 Ga0081538_10016002 3300005981 Bacteria 5773
33 Ga0081538_10018263 3300005981 Bacteria 5279
34 Ga0081538_10018438 3300005981 Bacteria 5240
35 Ga0081538_10018511 3300005981 Bacteria 5228
36 Ga0081538_10030408 3300005981 Bacteria 3667
37 Ga0081538_10072333 3300005981 Bacteria 1891
38 Ga0081538_10090001 3300005981 Bacteria 1591
39 Ga0081538_10097737 3300005981 Bacteria 1490
40 Ga0081538_10114363 3300005981 Bacteria 1315
41 Ga0081538_10116523 3300005981 Bacteria 1296
42 Ga0081538_10153823 3300005981 Bacteria 1036
43 Ga0081540_1004958 3300005983 Bacteria 10011
44 Ga0075365_10014834 3300006038 Bacteria 4696
45 Ga0075363_100237133 3300006048 Bacteria 1048
46 Ga0075428_100002740 3300006844 Bacteria 19185
47 Ga0075428_100012733 3300006844 Bacteria 9354
48 Ga0075428_100046157 3300006844 Bacteria 4786
49 Ga0075428_100063631 3300006844 Bacteria 4039
50 Ga0075428_100078240 3300006844 Bacteria 3610
51 Ga0075428_100145051 3300006844 Bacteria 2580
52 Ga0075428_100599558 3300006844 Bacteria 1176
53 Ga0075428_100763254 3300006844 Bacteria 1029
54 Ga0075430_100009838 3300006846 Bacteria 8088
55 Ga0075430_100037681 3300006846 Bacteria 4098
56 Ga0075430_100049770 3300006846 Bacteria 3536
57 Ga0075430_100160226 3300006846 Bacteria 1873
58 Ga0075430_100179011 3300006846 Bacteria 1764
59 Ga0075430_100293660 3300006846 Bacteria 1344
60 Ga0075430_100672458 3300006846 Bacteria 854
61 Ga0075431_100000080 3300006847 Bacteria 56888
62 Ga0075431_100003987 3300006847 Bacteria 14388
63 Ga0075431_100015211 3300006847 Bacteria 7797
64 Ga0075431_100059996 3300006847 Bacteria 3925
65 Ga0075431_100117822 3300006847 Bacteria 2740
66 Ga0075431_100168341 3300006847 Bacteria 2252
67 Ga0075431_100193463 3300006847 Bacteria 2083
68 Ga0075431_100589155 3300006847 Bacteria 1097
69 Ga0075433_10205879 3300006852 Bacteria 1749
70 Ga0075434_100293711 3300006871 Bacteria 1645
71 Ga0075429_100000505 3300006880 Bacteria 29445
72 Ga0075429_100001334 3300006880 Bacteria 20146
73 Ga0075429_100006825 3300006880 Bacteria 9907
74 Ga0075429_100055799 3300006880 Bacteria 3438
75 Ga0075429_100093755 3300006880 Bacteria 2618
76 Ga0075429_100198976 3300006880 Bacteria 1755
77 Ga0111539_10025470 3300009094 Bacteria 7254
78 Ga0111539_10075421 3300009094 Bacteria 3973
79 Ga0114129_10000804 3300009147 Bacteria 40281
80 Ga0114129_10077104 3300009147 Bacteria 4638
81 Ga0114129_10091233 3300009147 Bacteria 4221
82 Ga0114129_10109067 3300009147 Bacteria 3821
83 Ga0114129_10137973 3300009147 Bacteria 3345
84 Ga0114129_10141422 3300009147 Bacteria 3298
85 Ga0105248_10000111 3300009177 Bacteria 91627
86 Ga0105249_10021276 3300009553 Bacteria 5807
87 Ga0213876_10002214 3300021384 Bacteria 11472
88 Ga0207664_10038587 3300025929 Bacteria 3705
89 Ga0207711_10003975 3300025941 Bacteria 12716
90 Ga0207679_10091147 3300025945 Bacteria 2358
91 Ga0207679_10252356 3300025945 Bacteria 1500
92 Ga0207712_10046906 3300025961 Bacteria 2998
93 Ga0207678_10082596 3300026067 Bacteria 2749
94 Ga0207428_10003475 3300027907 Bacteria 15285
95 Ga0207428_10123138 3300027907 Bacteria 1987
96 Ga0268266_10047668 3300028379 Bacteria 3672
97 Ga0307511_10166810 3300030521 Bacteria 1221
98 Ga0307405_10507419 3300031731 Bacteria 968
99 Ga0307410_10044998 3300031852 Bacteria 2936
100 Ga0307406_10041684 3300031901 Bacteria 2862
101 Ga0307406_10377236 3300031901 Bacteria 1117
102 Ga0307407_10015150 3300031903 Bacteria 3800
103 Ga0307409_100048019 3300031995 Bacteria 3245
104 Ga0307416_100033448 3300032002 Bacteria 3897
105 Ga0307416_100302372 3300032002 Bacteria 1591
106 Ga0307416_100327753 3300032002 Bacteria 1537
107 Ga0307414_10035841 3300032004 Bacteria 3306
108 Ga0307411_10099916 3300032005 Bacteria 2049
109 Ga0307415_100273119 3300032126 Bacteria 1386
110 Ga0307507_10000005 3300033179 Bacteria 281494
111 Ga0395899_0022748 3300037312 Bacteria 4749
112 Ga0395899_0201932 3300037312 Bacteria 1386
113 Ga0395900_0001605 3300037418 Bacteria 26669
114 Ga0395898_0009467 3300037466 Bacteria 10234
115 Ga0395905_0029419 3300037471 Bacteria 5175
116 Ga0436364_0297339 3300037853 Bacteria 1155
117 Ga0395901_0003965 3300038443 Bacteria 14885
118 Ga0395901_0091293 3300038443 Bacteria 3188
119 Ga0400483_060076 3300039062 Bacteria 7092
120 Ga0400483_253538 3300039062 Bacteria 7802
121 Ga0436365_0102759 3300039437 Bacteria 44403
122 Ga0436365_1112899 3300039437 Bacteria 27402
123 Ga0436365_1605787 3300039437 Bacteria 3480
124 Ga0436362_0550378 3300039453 Bacteria 2284
125 Ga0439453_0057860 3300041408 Bacteria 797
126 Ga0466969_0147309 3300044656 Bacteria 1086
127 Ga0466966_0059974 3300044684 Unclassified 2402
128 Ga0466961_0022311 3300044693 Bacteria 4072
129 Ga0466963_0003956 3300044694 Bacteria 8573
130 Ga0466963_0108856 3300044694 Bacteria 1901
131 Ga0466963_0184535 3300044694 Bacteria 1457
132 Ga0466963_0589825 3300044694 Bacteria 785
133 Ga0466964_0225806 3300044706 Bacteria 911
134 Ga0466971_0030182 3300044719 Bacteria 2426
135 Ga0466959_0103922 3300045049 Bacteria 2032
136 Ga0466958_0026728 3300045836 Bacteria 3412
137 Ga0466958_0056557 3300045836 Bacteria 2383
138 Ga0466967_0030918 3300045976 Bacteria 4500
139 Ga0466967_0228322 3300045976 Bacteria 1771
140 Ga0466967_0317601 3300045976 Bacteria 1501
141 Ga0466967_0353384 3300045976 Bacteria 1423
142 Ga0495584_0095647 3300046491 Bacteria 1500
143 Ga0495663_0156453 3300046525 Bacteria 780
144 Ga0495659_0178593 3300046664 Bacteria 864
145 Ga0495672_0000063 3300047320 Bacteria 201893
146 Ga0495686_0010514 3300047472 Bacteria 6577
147 Ga0496118_0006161 3300048921 Bacteria 13301
148 Ga0501031_0003018 3300049568 Bacteria 10765
149 Ga0501031_0065539 3300049568 Bacteria 2366
150 Ga0501031_0349682 3300049568 Bacteria 957
151 Ga0501031_0362262 3300049568 Bacteria 938
152 Ga0501033_0062432 3300049570 Bacteria 2743
153 Ga0501034_0379575 3300049571 Bacteria 1338
154 Ga0501036_0021252 3300049572 Bacteria 5453
155 Ga0501036_0030360 3300049572 Bacteria 4566
156 Ga0501037_0036989 3300049573 Bacteria 3597
157 Ga0501038_0026517 3300049574 Bacteria 5161
158 Ga0501039_0145659 3300049575 Bacteria 1861
159 Ga0501041_0062395 3300049577 Bacteria 2281
160 Ga0501041_0130235 3300049577 Bacteria 1567
161 Ga0501043_0012167 3300049579 Bacteria 6725
162 Ga0501046_0014668 3300049580 Bacteria 6599
163 Ga0501046_0017671 3300049580 Bacteria 5948
164 Ga0501047_0144153 3300049581 Bacteria 2259
165 Ga0501047_0195090 3300049581 Bacteria 1887
166 Ga0501048_0012475 3300049582 Bacteria 6322
167 Ga0501048_0036038 3300049582 Bacteria 3557
168 Ga0501068_0038014 3300049584 Bacteria 2882
169 Ga0501069_0079416 3300049585 Bacteria 1846
170 Ga0501070_0588882 3300049586 Bacteria 887
171 Ga0501071_0066314 3300049587 Bacteria 2623
172 Ga0501071_0110186 3300049587 Bacteria 2034
173 Ga0501071_0122152 3300049587 Bacteria 1931
174 Ga0501072_0274063 3300049588 Bacteria 1342
175 Ga0501073_0148152 3300049589 Bacteria 1626
176 Ga0501074_0058607 3300049590 Bacteria 2774
177 Ga0501076_0067812 3300049592 Bacteria 2849
178 Ga0501076_0204902 3300049592 Bacteria 1611
179 Ga0501077_0011578 3300049593 Bacteria 5511
180 Ga0501079_0077696 3300049741 Bacteria 2568
181 Ga0501079_0296761 3300049741 Bacteria 1264
182 Ga0501080_0018742 3300049742 Bacteria 6405
183 Ga0501080_0875979 3300049742 Bacteria 784
184 Ga0501081_0193125 3300049743 Bacteria 1475
185 Ga0501081_0502580 3300049743 Bacteria 903
186 Ga0501083_0061059 3300049744 Bacteria 2517
187 Ga0501083_0153286 3300049744 Bacteria 1509
188 Ga0501045_0116827 3300049824 Bacteria 1980
189 Ga0501045_0378075 3300049824 Bacteria 1054
190 nmdc:mga03n38_134059_c1 3300050490 Bacteria 1230
191 nmdc:mga0yw44_191933_c1 3300050492 Bacteria 1347
192 nmdc:mga05p37_12284_c1 3300050507 Bacteria 10227
193 nmdc:mga05p37_134042_c1 3300050507 Bacteria 3039
194 nmdc:mga05p37_314290_c1 3300050507 Bacteria 1856
195 nmdc:mga05p37_7638_c1 3300050507 Bacteria 12760
196 nmdc:mga05p37_95727_c1 3300050507 Bacteria 3658
197 nmdc:mga09592_33044_c1 3300050508 Bacteria 4316
198 nmdc:mga09592_37248_c1 3300050508 Bacteria 4080
199 nmdc:mga09592_385672_c1 3300050508 Bacteria 1211
200 nmdc:mga09592_390518_c1 3300050508 Bacteria 1203
201 nmdc:mga09592_48394_c1 3300050508 Bacteria 3584
202 nmdc:mga09592_67579_c1 3300050508 Bacteria 3032
203 nmdc:mga09592_79450_c1 3300050508 Bacteria 2792
204 nmdc:mga09592_98273_c1 3300050508 Bacteria 2506
205 nmdc:mga0qj67_172522_c1 3300050509 Bacteria 1756
206 nmdc:mga0qj67_244234_c1 3300050509 Bacteria 1457
207 nmdc:mga0qj67_244809_c1 3300050509 Bacteria 1455
208 nmdc:mga0qj67_310636_c1 3300050509 Bacteria 1277
209 nmdc:mga0qj67_34041_c1 3300050509 Bacteria 3978
210 nmdc:mga0qj67_54383_c1 3300050509 Bacteria 3170
211 nmdc:mga0qj67_55751_c1 3300050509 Bacteria 3131
212 nmdc:mga0qj67_695906_c1 3300050509 Bacteria 809
213 nmdc:mga06r32_118241_c1 3300050510 Bacteria 2613
214 nmdc:mga06r32_14137_c1 3300050510 Bacteria 7240
215 nmdc:mga06r32_217648_c1 3300050510 Bacteria 1898
216 nmdc:mga06r32_246356_c1 3300050510 Bacteria 1775
217 nmdc:mga06r32_506683_c1 3300050510 Bacteria 1184
218 nmdc:mga06r32_7762_c1 3300050510 Bacteria 9645
219 nmdc:mga06r32_830403_c1 3300050510 Bacteria 883
220 nmdc:mga08y16_53993_c1 3300050511 Bacteria 4200
221 nmdc:mga0a205_33563_c1 3300050515 Bacteria 4920
222 Ga0500583_0027501 3300053092 Bacteria 2456
223 Ga0501084_0035877 3300054114 Bacteria 4145
224 Ga0501084_0039541 3300054114 Bacteria 3945
225 Ga0501082_0121656 3300060353 Bacteria 2262
226 Ga0466962_0024559 3300061719 Bacteria 2895
227 Ga0466962_0037110 3300061719 Bacteria 2333
228 Ga0530510_0026905 3300061734 Bacteria 4120
229 Ga0530510_0420414 3300061734 Bacteria 1009

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300006847 Ga0075431_100193463 Ga0075431_1001934632 193
2 3300050508 nmdc:mga09592_390518_c1 nmdc:mga09592_390518_c1_214_876 193
3 3300050509 nmdc:mga0qj67_172522_c1 nmdc:mga0qj67_172522_c1_189_851 193
4 3300047320 Ga0495672_0000063 Ga0495672_0000063_126759_127379 198
5 3300006844 Ga0075428_100145051 Ga0075428_1001450512 200
6 3300006846 Ga0075430_100293660 Ga0075430_1002936602 200
7 3300009094 Ga0111539_10025470 Ga0111539_100254705 200
8 3300027907 Ga0207428_10123138 Ga0207428_101231382 200
9 3300050509 nmdc:mga0qj67_310636_c1 nmdc:mga0qj67_310636_c1_302_973 200
10 3300050510 nmdc:mga06r32_118241_c1 nmdc:mga06r32_118241_c1_361_1032 200
11 3300005577 Ga0068857_100260021 Ga0068857_1002600212 201
12 3300039062 Ga0400483_060076 Ga0400483_060076_6125_6772 201
13 3300039062 Ga0400483_253538 Ga0400483_253538_6906_7553 201
14 3300050492 nmdc:mga0yw44_191933_c1 nmdc:mga0yw44_191933_c1_502_1176 201
15 3300006844 Ga0075428_100002740 Ga0075428_10000274022 202
16 3300006847 Ga0075431_100003987 Ga0075431_1000039872 202
17 3300006880 Ga0075429_100000505 Ga0075429_1000005052 202
18 3300050507 nmdc:mga05p37_134042_c1 nmdc:mga05p37_134042_c1_988_1650 202
19 3300050508 nmdc:mga09592_33044_c1 nmdc:mga09592_33044_c1_3331_3993 202
20 3300050510 nmdc:mga06r32_246356_c1 nmdc:mga06r32_246356_c1_243_905 202
21 3300005937 Ga0081455_10189049 Ga0081455_101890492 203
22 3300061734 Ga0530510_0420414 Ga0530510_0420414_216_869 203
23 3300006844 Ga0075428_100763254 Ga0075428_1007632541 204
24 3300006846 Ga0075430_100160226 Ga0075430_1001602262 204
25 3300009147 Ga0114129_10091233 Ga0114129_100912334 204
26 3300044656 Ga0466969_0147309 Ga0466969_0147309_458_1072 204
27 3300047472 Ga0495686_0010514 Ga0495686_0010514_5518_6171 204
28 3300050507 nmdc:mga05p37_12284_c1 nmdc:mga05p37_12284_c1_3275_3925 204
29 3300050509 nmdc:mga0qj67_55751_c1 nmdc:mga0qj67_55751_c1_1972_2622 204
30 3300005937 Ga0081455_10365938 Ga0081455_103659382 206
31 3300025945 Ga0207679_10252356 Ga0207679_102523562 206
32 3300031903 Ga0307407_10015150 Ga0307407_100151504 207
33 3300031995 Ga0307409_100048019 Ga0307409_1000480193 207
34 3300032005 Ga0307411_10099916 Ga0307411_100999162 207
35 3300005937 Ga0081455_10013107 Ga0081455_100131073 209
36 3300044694 Ga0466963_0184535 Ga0466963_0184535_613_1275 210
37 3300031731 Ga0307405_10507419 Ga0307405_105074191 214
38 3300006048 Ga0075363_100237133 Ga0075363_1002371332 215
39 3300050490 nmdc:mga03n38_134059_c1 nmdc:mga03n38_134059_c1_165_860 215
40 iso_pu_bacteria 8002784119 8002788027 215
41 3300032002 Ga0307416_100327753 Ga0307416_1003277532 216
42 iso_pu_bacteria 2508501039 2508678534 216
43 iso_pu_bacteria 2675902999 2676200302 216
44 iso_pu_bacteria 2773857921 2774844880 216
45 3300005455 Ga0070663_100220511 Ga0070663_1002205112 217
46 3300005937 Ga0081455_10002594 Ga0081455_1000259416 217
47 3300005981 Ga0081538_10072333 Ga0081538_100723332 217
48 3300006038 Ga0075365_10014834 Ga0075365_100148342 217
49 3300006844 Ga0075428_100012733 Ga0075428_1000127339 217
50 3300006846 Ga0075430_100009838 Ga0075430_1000098381 217
51 3300006846 Ga0075430_100037681 Ga0075430_1000376812 217
52 3300006847 Ga0075431_100000080 Ga0075431_10000008029 217
53 3300006847 Ga0075431_100015211 Ga0075431_1000152114 217
54 3300006852 Ga0075433_10205879 Ga0075433_102058792 217
55 3300006871 Ga0075434_100293711 Ga0075434_1002937112 217
56 3300006880 Ga0075429_100001334 Ga0075429_1000013348 217
57 3300009094 Ga0111539_10075421 Ga0111539_100754212 217
58 3300009147 Ga0114129_10000804 Ga0114129_100008042 217
59 3300009147 Ga0114129_10137973 Ga0114129_101379734 217
60 3300021384 Ga0213876_10002214 Ga0213876_1000221422 217
61 3300025945 Ga0207679_10091147 Ga0207679_100911472 217
62 3300026067 Ga0207678_10082596 Ga0207678_100825963 217
63 3300027907 Ga0207428_10003475 Ga0207428_100034753 217
64 3300028379 Ga0268266_10047668 Ga0268266_100476682 217
65 3300033179 Ga0307507_10000005 Ga0307507_1000000560 217
66 3300039437 Ga0436365_0102759 Ga0436365_0102759_31067_31738 217
67 3300050507 nmdc:mga05p37_7638_c1 nmdc:mga05p37_7638_c1_2533_3204 217
68 3300050508 nmdc:mga09592_67579_c1 nmdc:mga09592_67579_c1_1209_1880 217
69 3300050510 nmdc:mga06r32_14137_c1 nmdc:mga06r32_14137_c1_2035_2706 217
70 3300050510 nmdc:mga06r32_7762_c1 nmdc:mga06r32_7762_c1_5362_6033 217
71 3300050511 nmdc:mga08y16_53993_c1 nmdc:mga08y16_53993_c1_1084_1755 217
72 3300050515 nmdc:mga0a205_33563_c1 nmdc:mga0a205_33563_c1_94_765 217
73 3300006844 Ga0075428_100063631 Ga0075428_1000636313 218
74 3300006880 Ga0075429_100055799 Ga0075429_1000557993 218
75 3300009147 Ga0114129_10141422 Ga0114129_101414223 218
76 3300032126 Ga0307415_100273119 Ga0307415_1002731192 218
77 3300044719 Ga0466971_0030182 Ga0466971_0030182_660_1316 218
78 3300049568 Ga0501031_0362262 Ga0501031_0362262_141_797 218
79 3300049587 Ga0501071_0122152 Ga0501071_0122152_1030_1686 218
80 3300050508 nmdc:mga09592_79450_c1 nmdc:mga09592_79450_c1_1663_2322 218
81 3300050510 nmdc:mga06r32_217648_c1 nmdc:mga06r32_217648_c1_466_1125 218
82 3300061719 Ga0466962_0024559 Ga0466962_0024559_1767_2423 218
83 iso_pu_bacteria 2842888712 2842891648 218
84 3300005435 Ga0070714_100236661 Ga0070714_1002366612 219
85 3300005435 Ga0070714_100439414 Ga0070714_1004394142 219
86 3300005436 Ga0070713_100026923 Ga0070713_1000269233 219
87 3300025929 Ga0207664_10038587 Ga0207664_100385874 219
88 3300030521 Ga0307511_10166810 Ga0307511_101668102 219
89 3300044684 Ga0466966_0059974 Ga0466966_0059974_1297_1956 219
90 3300044694 Ga0466963_0108856 Ga0466963_0108856_41_700 219
91 3300044694 Ga0466963_0589825 Ga0466963_0589825_36_701 219
92 3300045836 Ga0466958_0026728 Ga0466958_0026728_132_791 219
93 3300045976 Ga0466967_0353384 Ga0466967_0353384_137_796 219
94 3300061719 Ga0466962_0037110 Ga0466962_0037110_403_1065 219
95 iso_pu_bacteria 2551306166 2552109666 219
96 3300003373 JGI25407J50210_10007622 JGI25407J50210_100076222 220
97 3300003373 JGI25407J50210_10029681 JGI25407J50210_100296812 220
98 3300003373 JGI25407J50210_10036307 JGI25407J50210_100363072 220
99 3300003373 JGI25407J50210_10040294 JGI25407J50210_100402942 220
100 3300003373 JGI25407J50210_10049179 JGI25407J50210_100491792 220
101 3300005331 Ga0070670_100017203 Ga0070670_1000172036 220
102 3300005444 Ga0070694_100469260 Ga0070694_1004692601 220
103 3300005549 Ga0070704_100754842 Ga0070704_1007548421 220
104 3300005937 Ga0081455_10020396 Ga0081455_100203966 220
105 3300005937 Ga0081455_10114103 Ga0081455_101141033 220
106 3300005981 Ga0081538_10000128 Ga0081538_1000012852 220
107 3300005981 Ga0081538_10000169 Ga0081538_100001698 220
108 3300005981 Ga0081538_10000762 Ga0081538_1000076219 220
109 3300005981 Ga0081538_10001214 Ga0081538_1000121422 220
110 3300005981 Ga0081538_10002526 Ga0081538_1000252614 220
111 3300005981 Ga0081538_10002532 Ga0081538_1000253213 220
112 3300005981 Ga0081538_10010304 Ga0081538_100103043 220
113 3300005981 Ga0081538_10010716 Ga0081538_100107162 220
114 3300005981 Ga0081538_10012850 Ga0081538_100128506 220
115 3300005981 Ga0081538_10015757 Ga0081538_100157574 220
116 3300005981 Ga0081538_10016002 Ga0081538_100160022 220
117 3300005981 Ga0081538_10018263 Ga0081538_100182633 220
118 3300005981 Ga0081538_10018438 Ga0081538_100184383 220
119 3300005981 Ga0081538_10018511 Ga0081538_100185116 220
120 3300005981 Ga0081538_10030408 Ga0081538_100304082 220
121 3300005981 Ga0081538_10090001 Ga0081538_100900012 220
122 3300005981 Ga0081538_10097737 Ga0081538_100977372 220
123 3300005981 Ga0081538_10114363 Ga0081538_101143631 220
124 3300005981 Ga0081538_10116523 Ga0081538_101165232 220
125 3300005981 Ga0081538_10153823 Ga0081538_101538232 220
126 3300005983 Ga0081540_1004958 Ga0081540_10049588 220
127 3300006844 Ga0075428_100046157 Ga0075428_1000461572 220
128 3300006844 Ga0075428_100078240 Ga0075428_1000782402 220
129 3300006844 Ga0075428_100599558 Ga0075428_1005995582 220
130 3300006846 Ga0075430_100049770 Ga0075430_1000497702 220
131 3300006846 Ga0075430_100179011 Ga0075430_1001790113 220
132 3300006846 Ga0075430_100672458 Ga0075430_1006724581 220
133 3300006847 Ga0075431_100059996 Ga0075431_1000599962 220
134 3300006847 Ga0075431_100117822 Ga0075431_1001178222 220
135 3300006847 Ga0075431_100168341 Ga0075431_1001683412 220
136 3300006847 Ga0075431_100589155 Ga0075431_1005891552 220
137 3300006880 Ga0075429_100006825 Ga0075429_1000068252 220
138 3300006880 Ga0075429_100093755 Ga0075429_1000937552 220
139 3300006880 Ga0075429_100198976 Ga0075429_1001989762 220
140 3300009147 Ga0114129_10077104 Ga0114129_100771043 220
141 3300009147 Ga0114129_10109067 Ga0114129_101090673 220
142 3300009177 Ga0105248_10000111 Ga0105248_1000011138 220
143 3300009553 Ga0105249_10021276 Ga0105249_100212767 220
144 3300025941 Ga0207711_10003975 Ga0207711_100039757 220
145 3300025961 Ga0207712_10046906 Ga0207712_100469063 220
146 3300031852 Ga0307410_10044998 Ga0307410_100449982 220
147 3300031901 Ga0307406_10041684 Ga0307406_100416842 220
148 3300031901 Ga0307406_10377236 Ga0307406_103772362 220
149 3300032002 Ga0307416_100033448 Ga0307416_1000334482 220
150 3300032002 Ga0307416_100302372 Ga0307416_1003023722 220
151 3300032004 Ga0307414_10035841 Ga0307414_100358412 220
152 3300037312 Ga0395899_0022748 Ga0395899_0022748_2807_3472 220
153 3300037312 Ga0395899_0201932 Ga0395899_0201932_320_985 220
154 3300037418 Ga0395900_0001605 Ga0395900_0001605_110_775 220
155 3300037466 Ga0395898_0009467 Ga0395898_0009467_6327_6992 220
156 3300037471 Ga0395905_0029419 Ga0395905_0029419_3772_4437 220
157 3300037853 Ga0436364_0297339 Ga0436364_0297339_430_1104 220
158 3300038443 Ga0395901_0003965 Ga0395901_0003965_12280_12945 220
159 3300038443 Ga0395901_0091293 Ga0395901_0091293_2159_2824 220
160 3300039437 Ga0436365_1112899 Ga0436365_1112899_1205_1870 220
161 3300039437 Ga0436365_1605787 Ga0436365_1605787_2135_2809 220
162 3300039453 Ga0436362_0550378 Ga0436362_0550378_973_1659 220
163 3300041408 Ga0439453_0057860 Ga0439453_0057860_58_723 220
164 3300044693 Ga0466961_0022311 Ga0466961_0022311_2823_3500 220
165 3300044694 Ga0466963_0003956 Ga0466963_0003956_7862_8530 220
166 3300044706 Ga0466964_0225806 Ga0466964_0225806_39_707 220
167 3300045049 Ga0466959_0103922 Ga0466959_0103922_460_1128 220
168 3300045836 Ga0466958_0056557 Ga0466958_0056557_194_862 220
169 3300045976 Ga0466967_0030918 Ga0466967_0030918_2468_3136 220
170 3300045976 Ga0466967_0228322 Ga0466967_0228322_850_1512 220
171 3300045976 Ga0466967_0317601 Ga0466967_0317601_347_1012 220
172 3300046491 Ga0495584_0095647 Ga0495584_0095647_510_1172 220
173 3300046525 Ga0495663_0156453 Ga0495663_0156453_26_691 220
174 3300046664 Ga0495659_0178593 Ga0495659_0178593_46_708 220
175 3300048921 Ga0496118_0006161 Ga0496118_0006161_10572_11264 220
176 3300049568 Ga0501031_0003018 Ga0501031_0003018_4074_4745 220
177 3300049568 Ga0501031_0065539 Ga0501031_0065539_1538_2203 220
178 3300049568 Ga0501031_0349682 Ga0501031_0349682_64_795 220
179 3300049570 Ga0501033_0062432 Ga0501033_0062432_1751_2416 220
180 3300049571 Ga0501034_0379575 Ga0501034_0379575_304_969 220
181 3300049572 Ga0501036_0021252 Ga0501036_0021252_144_815 220
182 3300049572 Ga0501036_0030360 Ga0501036_0030360_209_874 220
183 3300049573 Ga0501037_0036989 Ga0501037_0036989_2130_2795 220
184 3300049574 Ga0501038_0026517 Ga0501038_0026517_2568_3233 220
185 3300049575 Ga0501039_0145659 Ga0501039_0145659_543_1214 220
186 3300049577 Ga0501041_0062395 Ga0501041_0062395_408_1079 220
187 3300049577 Ga0501041_0130235 Ga0501041_0130235_659_1333 220
188 3300049579 Ga0501043_0012167 Ga0501043_0012167_4223_4888 220
189 3300049580 Ga0501046_0014668 Ga0501046_0014668_2456_3121 220
190 3300049580 Ga0501046_0017671 Ga0501046_0017671_5250_5921 220
191 3300049581 Ga0501047_0144153 Ga0501047_0144153_1386_2051 220
192 3300049581 Ga0501047_0195090 Ga0501047_0195090_311_976 220
193 3300049582 Ga0501048_0012475 Ga0501048_0012475_3636_4310 220
194 3300049582 Ga0501048_0036038 Ga0501048_0036038_2421_3086 220
195 3300049584 Ga0501068_0038014 Ga0501068_0038014_1867_2538 220
196 3300049585 Ga0501069_0079416 Ga0501069_0079416_310_975 220
197 3300049586 Ga0501070_0588882 Ga0501070_0588882_28_693 220
198 3300049587 Ga0501071_0066314 Ga0501071_0066314_1827_2498 220
199 3300049587 Ga0501071_0110186 Ga0501071_0110186_466_1131 220
200 3300049588 Ga0501072_0274063 Ga0501072_0274063_503_1177 220
201 3300049589 Ga0501073_0148152 Ga0501073_0148152_37_702 220
202 3300049590 Ga0501074_0058607 Ga0501074_0058607_1642_2307 220
203 3300049592 Ga0501076_0067812 Ga0501076_0067812_1403_2074 220
204 3300049592 Ga0501076_0204902 Ga0501076_0204902_820_1551 220
205 3300049593 Ga0501077_0011578 Ga0501077_0011578_4729_5400 220
206 3300049741 Ga0501079_0077696 Ga0501079_0077696_103_765 220
207 3300049741 Ga0501079_0296761 Ga0501079_0296761_91_762 220
208 3300049742 Ga0501080_0018742 Ga0501080_0018742_3414_4079 220
209 3300049742 Ga0501080_0875979 Ga0501080_0875979_14_685 220
210 3300049743 Ga0501081_0193125 Ga0501081_0193125_332_1006 220
211 3300049743 Ga0501081_0502580 Ga0501081_0502580_151_813 220
212 3300049744 Ga0501083_0061059 Ga0501083_0061059_339_1004 220
213 3300049744 Ga0501083_0153286 Ga0501083_0153286_74_745 220
214 3300049824 Ga0501045_0116827 Ga0501045_0116827_416_1147 220
215 3300049824 Ga0501045_0378075 Ga0501045_0378075_75_737 220
216 3300050507 nmdc:mga05p37_314290_c1 nmdc:mga05p37_314290_c1_472_1143 220
217 3300050507 nmdc:mga05p37_95727_c1 nmdc:mga05p37_95727_c1_370_1035 220
218 3300050508 nmdc:mga09592_37248_c1 nmdc:mga09592_37248_c1_603_1268 220
219 3300050508 nmdc:mga09592_385672_c1 nmdc:mga09592_385672_c1_84_749 220
220 3300050508 nmdc:mga09592_48394_c1 nmdc:mga09592_48394_c1_169_840 220
221 3300050508 nmdc:mga09592_98273_c1 nmdc:mga09592_98273_c1_484_1149 220
222 3300050509 nmdc:mga0qj67_244234_c1 nmdc:mga0qj67_244234_c1_430_1095 220
223 3300050509 nmdc:mga0qj67_244809_c1 nmdc:mga0qj67_244809_c1_604_1269 220
224 3300050509 nmdc:mga0qj67_34041_c1 nmdc:mga0qj67_34041_c1_2728_3393 220
225 3300050509 nmdc:mga0qj67_54383_c1 nmdc:mga0qj67_54383_c1_2030_2701 220
226 3300050509 nmdc:mga0qj67_695906_c1 nmdc:mga0qj67_695906_c1_69_734 220
227 3300050510 nmdc:mga06r32_506683_c1 nmdc:mga06r32_506683_c1_345_1016 220
228 3300050510 nmdc:mga06r32_830403_c1 nmdc:mga06r32_830403_c1_185_862 220
229 3300053092 Ga0500583_0027501 Ga0500583_0027501_773_1450 220
230 3300054114 Ga0501084_0035877 Ga0501084_0035877_2296_2967 220
231 3300054114 Ga0501084_0039541 Ga0501084_0039541_1557_2222 220
232 3300060353 Ga0501082_0121656 Ga0501082_0121656_1389_2054 220
233 3300061734 Ga0530510_0026905 Ga0530510_0026905_2004_2675 220
234 iso_pu_bacteria 2744054611 2744953753 220
235 3300003373 JGI25407J50210_10004214 JGI25407J50210_100042143 245
236 3300005981 Ga0081538_10001305 Ga0081538_1000130511 245

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

172

228

0.98

PF00072

Response_reg

Response regulator receiver domain

23

136

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wsz-assembly1.cif.gz_B crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9969 177 239
4wsz-assembly1.cif.gz_A crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9942 177 239
4wu4-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 22bp dna 0.9886 177 240
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.988 177 239
7ve5-assembly1.cif.gz_B c-terminal domain of vrar 0.9822 175 239
ID Description Score Start End Superfamily
af_P06993_830_894_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9975 179 233 1.10.10.10
af_Q11028_1077_1158_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9969 178 237 1.10.10.10
af_P52106_149_214_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9937 178 233 1.10.10.10
af_O53213_1064_1134_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9918 179 233 1.10.10.10
4if4D02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9824 175 240 1.10.10.10
ID Description Score Start End GO Terms
AF-S0FNQ2-F1-model_v4 Stage 0 sporulation protein A homolog 0.9427 36 145 GO:0000160
AF-A0A2S8L796-F1-model_v4 deleted 0.9396 34 160
AF-A0A7W0M8R0-F1-model_v4 Response regulator transcription factor 0.9354 37 141 GO:0000160
GO:0003677
AF-L8LZ89-F1-model_v4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 0.9337 34 155 GO:0000160
GO:0003677
GO:0016020
AF-A0A1W9UMY2-F1-model_v4 Response regulatory domain-containing protein 0.9334 34 161 GO:0000160
GO:0003677

Feature Viewer

pLDDT pTM Quality
80.46 0.6 Medium
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Predicted Structure (AlphaFold2)

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