F349399

General Info

Members Datasets Scaffolds Average Seq Length
236 147 232 868

Family's Representative Sequence

Representative Sequence 3300047472|Ga0495686_0004956|Ga0495686_0004956_5392_8139
Length 915
Sequence LVTLTKKTNFQSACHVRLSFSGGGLNTYLNQSTYMKILEIKVLKGPNYWSVRRGKLIQMKLDLEELEQKPTNEIPGFKDRLEKLLPSLYEHECSEGKPGGFLSRVADGTWMGHVIEHIALEIQTLAGMDTGFGRTRGTGEKEGVYHVVFSYMEEDAGVYAARAAVRIAEALVEGTDYNLDEDIQQMREIREDTRLGPSTGCIVDEAAKRGIPFIRLNKQSLVQLGYGVNQKRIRATIASTTSNIAVDIACDKEETKILLEAAEIPVPRGTVVRTEEGLKDAIEKYNYPLVIKPIDGNHGKGNTTNITTWEQATKAFEAAKAYGRNVIVEKFITGFDFRCLVINYKFICAALRTPASVVGDGKNNIQWLINETNKDPRRGYGHEKVLTQITIDQFTQKMLDDLGYTLETVPAKGELVLLKPTANLSTGGTSTDVTDEVHPANVFMFERIAKIIGLDICGIDVMATDLRTPVAENGGAILEVNAAPGFRMHIEPAEGLARNVAEPVVDMLFPKGSAGRVPIIAITGTNGKTTTTRLTAHLAKSAGKKVGYTTSDGVYIQNQMMMKGDCTGPVSSTFVLKDPTVDFAVLECARGGILKSGLAFRNCDVAVVTNVAADHMGLGGINTLEQMAKVKAVVPETVFPHGYAILNADDDLVYKMREGLDCNVALFSMDENNPRIKKHCANGGLATVYENGFVTIMKGTWKVRVLPVKNIPVTYEGKAIHNVNNCLPAVLAAYLFRDITIEDIRTGLQTFIPSESLTPGRLNFFHFKNYTMLADFAHNPHGLKLLCDFISKLEYTTKIGIISGTGDRRDEDIRELGEISAQYFDEIIIRCDKNLRGRTADEIINLLKEGIEKVNPHLPTITIANENEALEYIYANPRHGALYTIMCDVVAGALDKIAELKEREEKEGSIAPLPA

Samples

Sample ID Description Type Environment
1 2739367656 Pedobacter sp. CF523 Isolate Unclassified
2 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
3 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
6 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
7 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
16 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
81 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
82 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
83 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
114 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
115 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
116 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
117 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
118 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
121 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
122 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
123 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
124 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
125 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
126 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
127 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
132 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
133 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
134 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
135 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
136 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
137 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
142 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
143 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
144 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
145 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
146 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
147 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.31
Metatranscriptomes 0
Isolates 1.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.66
Nodule 0
Rhizoplane 0.42
Rhizosphere 89.83
Stem 0
Stem Tuber 0
Unclassified 5.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10000195 3300001990 Bacteria 19694
2 JGI24751J29686_10000727 3300002459 Bacteria 7978
3 JGI25162J39368_1001329 3300002737 Bacteria 13788
4 JGI25406J46586_10001143 3300003203 Bacteria 12460
5 rootH2_10012129 3300003320 Bacteria 47530
6 rootH1_10024310 3300003323 Bacteria 54858
7 rootH1_10248937 3300003323 Bacteria 4283
8 Ga0065712_10001055 3300005290 Bacteria 10521
9 Ga0070658_10000069 3300005327 Bacteria 101140
10 Ga0070683_100006858 3300005329 Bacteria 9570
11 Ga0070683_100072219 3300005329 Bacteria 3221
12 Ga0070690_100018975 3300005330 Bacteria 4165
13 Ga0070670_100022521 3300005331 Bacteria 5422
14 Ga0070677_10002957 3300005333 Bacteria 5463
15 Ga0068869_100039973 3300005334 Bacteria 3351
16 Ga0070666_10000131 3300005335 Bacteria 52822
17 Ga0070666_10014726 3300005335 Bacteria 4982
18 Ga0070682_100000101 3300005337 Bacteria 76535
19 Ga0068868_100021241 3300005338 Bacteria 4889
20 Ga0070660_100001327 3300005339 Bacteria 16821
21 Ga0070660_100019938 3300005339 Bacteria 4920
22 Ga0070660_100029212 3300005339 Bacteria 4130
23 Ga0070661_100025256 3300005344 Bacteria 4269
24 Ga0070668_100008523 3300005347 Bacteria 7614
25 Ga0070669_100001361 3300005353 Bacteria 17616
26 Ga0070675_100003755 3300005354 Bacteria 11533
27 Ga0070671_100039889 3300005355 Unclassified 3898
28 Ga0070671_100075202 3300005355 Bacteria 2821
29 Ga0070688_100006087 3300005365 Bacteria 6409
30 Ga0070659_100026316 3300005366 Bacteria 4476
31 Ga0070667_100006586 3300005367 Bacteria 9658
32 Ga0070667_100013378 3300005367 Bacteria 6783
33 Ga0070662_100016018 3300005457 Bacteria 5030
34 Ga0070662_100056740 3300005457 Bacteria 2843
35 Ga0070681_10073542 3300005458 Bacteria 3379
36 Ga0068867_100003552 3300005459 Bacteria 10963
37 Ga0070685_10026448 3300005466 Bacteria 3198
38 Ga0070698_100005064 3300005471 Bacteria 14441
39 Ga0070698_100011518 3300005471 Bacteria 9387
40 Ga0070679_100002459 3300005530 Bacteria 16772
41 Ga0070679_100011686 3300005530 Bacteria 8371
42 Ga0070684_100024709 3300005535 Bacteria 5042
43 Ga0068853_100025131 3300005539 Bacteria 4997
44 Ga0068855_100000021 3300005563 Bacteria 195708
45 Ga0068855_100000387 3300005563 Bacteria 54152
46 Ga0068855_100008447 3300005563 Bacteria 12451
47 Ga0070664_100000856 3300005564 Bacteria 23540
48 Ga0068857_100005708 3300005577 Bacteria 10642
49 Ga0068857_100014043 3300005577 Bacteria 6971
50 Ga0068857_100033534 3300005577 Bacteria 4541
51 Ga0068856_100000006 3300005614 Bacteria 223827
52 Ga0068856_100012915 3300005614 Bacteria 8084
53 Ga0068856_100032379 3300005614 Bacteria 5118
54 Ga0068852_100006176 3300005616 Bacteria 8639
55 Ga0068852_100030870 3300005616 Bacteria 4415
56 Ga0068859_100000099 3300005617 Bacteria 80240
57 Ga0068859_100000575 3300005617 Bacteria 36670
58 Ga0068859_100027467 3300005617 Bacteria 5707
59 Ga0068859_100044290 3300005617 Bacteria 4471
60 Ga0068859_100048000 3300005617 Bacteria 4290
61 Ga0068864_100009231 3300005618 Bacteria 8133
62 Ga0068864_100028828 3300005618 Bacteria 4697
63 Ga0068866_10007524 3300005718 Bacteria 4563
64 Ga0068866_10026605 3300005718 Bacteria 2734
65 Ga0068861_100047839 3300005719 Bacteria 3230
66 Ga0068863_100020140 3300005841 Bacteria 6381
67 Ga0068860_100005482 3300005843 Bacteria 12858
68 Ga0068860_100013625 3300005843 Bacteria 7970
69 Ga0068860_100018767 3300005843 Bacteria 6720
70 Ga0068860_100021752 3300005843 Bacteria 6206
71 Ga0068862_100008324 3300005844 Bacteria 8584
72 Ga0068862_100041691 3300005844 Bacteria 3907
73 Ga0081539_10001463 3300005985 Bacteria 40106
74 Ga0097621_100030421 3300006237 Unclassified 4273
75 Ga0097621_100036178 3300006237 Bacteria 3950
76 Ga0068871_100031703 3300006358 Bacteria 4170
77 Ga0068871_100033771 3300006358 Bacteria 4053
78 Ga0075428_100015198 3300006844 Bacteria 8539
79 Ga0075428_100028119 3300006844 Bacteria 6219
80 Ga0075430_100042282 3300006846 Bacteria 3854
81 Ga0075431_100015938 3300006847 Bacteria 7625
82 Ga0075429_100005844 3300006880 Bacteria 10616
83 Ga0097620_100000099 3300006931 Bacteria 80240
84 Ga0097620_100000575 3300006931 Bacteria 36670
85 Ga0097620_100027467 3300006931 Bacteria 5707
86 Ga0097620_100044289 3300006931 Bacteria 4471
87 Ga0097620_100048000 3300006931 Bacteria 4290
88 Ga0105240_10000011 3300009093 Bacteria 523646
89 Ga0105240_10000128 3300009093 Bacteria 156107
90 Ga0111539_10008650 3300009094 Bacteria 12921
91 Ga0105247_10001222 3300009101 Bacteria 19066
92 Ga0105247_10005361 3300009101 Bacteria 8083
93 Ga0105247_10031481 3300009101 Bacteria 3219
94 Ga0114129_10056282 3300009147 Bacteria 5509
95 Ga0105241_10004791 3300009174 Bacteria 9961
96 Ga0105241_10020365 3300009174 Bacteria 4900
97 Ga0105242_10002400 3300009176 Bacteria 14740
98 Ga0105242_10024590 3300009176 Bacteria 4758
99 Ga0105237_10000782 3300009545 Bacteria 43496
100 Ga0105237_10001259 3300009545 Bacteria 33851
101 Ga0105237_10005649 3300009545 Bacteria 14081
102 Ga0105237_10010148 3300009545 Bacteria 10038
103 Ga0105237_10066322 3300009545 Bacteria 3604
104 Ga0105249_10013556 3300009553 Bacteria 7200
105 Ga0105239_10000052 3300010375 Bacteria 164624
106 Ga0105239_10000069 3300010375 Bacteria 144493
107 Ga0105239_10013691 3300010375 Bacteria 9006
108 Ga0157373_10016898 3300013100 Bacteria 5320
109 Ga0157371_10026339 3300013102 Unclassified 4229
110 Ga0157371_10026654 3300013102 Bacteria 4198
111 Ga0157370_10014457 3300013104 Bacteria 8069
112 Ga0157369_10019117 3300013105 Bacteria 7669
113 Ga0157374_10005636 3300013296 Bacteria 10556
114 Ga0157374_10040206 3300013296 Bacteria 4305
115 Ga0157378_10000837 3300013297 Bacteria 28570
116 Ga0157378_10007685 3300013297 Bacteria 9406
117 Ga0157378_10046536 3300013297 Bacteria 3856
118 Ga0163162_10012376 3300013306 Bacteria 8330
119 Ga0163162_10016023 3300013306 Bacteria 7326
120 Ga0163162_10024360 3300013306 Bacteria 5971
121 Ga0163162_10116909 3300013306 Bacteria 2768
122 Ga0157372_10001484 3300013307 Bacteria 25487
123 Ga0157372_10007627 3300013307 Bacteria 11505
124 Ga0157375_10014757 3300013308 Bacteria 6982
125 Ga0163163_10000816 3300014325 Bacteria 26526
126 Ga0157380_10009053 3300014326 Bacteria 7113
127 Ga0157380_10023351 3300014326 Bacteria 4664
128 Ga0157377_10002857 3300014745 Bacteria 7706
129 Ga0157379_10016487 3300014968 Bacteria 6498
130 Ga0157376_10050183 3300014969 Bacteria 3460
131 Ga0157376_10079133 3300014969 Bacteria 2817
132 Ga0207427_100072 3300025231 Bacteria 158364
133 Ga0209437_100026 3300025233 Bacteria 542698
134 Ga0209233_1000111 3300025261 Bacteria 260262
135 Ga0207710_10002271 3300025900 Bacteria 8995
136 Ga0207680_10000189 3300025903 Bacteria 29752
137 Ga0207705_10000032 3300025909 Bacteria 224376
138 Ga0207705_10032406 3300025909 Bacteria 3735
139 Ga0207695_10000010 3300025913 Bacteria 981919
140 Ga0207695_10000179 3300025913 Bacteria 185564
141 Ga0207671_10000856 3300025914 Bacteria 38592
142 Ga0207671_10001617 3300025914 Bacteria 25642
143 Ga0207671_10003842 3300025914 Bacteria 14693
144 Ga0207657_10007596 3300025919 Bacteria 11102
145 Ga0207657_10038696 3300025919 Bacteria 4243
146 Ga0207649_10001324 3300025920 Bacteria 14731
147 Ga0207644_10031037 3300025931 Bacteria 3721
148 Ga0207690_10010562 3300025932 Bacteria 5494
149 Ga0207706_10065876 3300025933 Bacteria 3189
150 Ga0207686_10000715 3300025934 Bacteria 20597
151 Ga0207669_10014063 3300025937 Bacteria 4001
152 Ga0207691_10006449 3300025940 Bacteria 11331
153 Ga0207689_10002889 3300025942 Bacteria 15845
154 Ga0207689_10003874 3300025942 Bacteria 13631
155 Ga0207689_10066018 3300025942 Bacteria 2976
156 Ga0207679_10000534 3300025945 Bacteria 25730
157 Ga0207667_10000014 3300025949 Bacteria 421261
158 Ga0207667_10001788 3300025949 Bacteria 27052
159 Ga0207651_10014396 3300025960 Bacteria 4565
160 Ga0207712_10001188 3300025961 Bacteria 17998
161 Ga0207712_10005464 3300025961 Bacteria 8024
162 Ga0207703_10004278 3300026035 Bacteria 11745
163 Ga0207639_10017797 3300026041 Bacteria 5039
164 Ga0207678_10052525 3300026067 Bacteria 3516
165 Ga0207702_10000023 3300026078 Bacteria 189234
166 Ga0207702_10009754 3300026078 Bacteria 8061
167 Ga0207641_10000213 3300026088 Bacteria 75051
168 Ga0207641_10001381 3300026088 Bacteria 23943
169 Ga0207641_10031419 3300026088 Bacteria 4404
170 Ga0207641_10031665 3300026088 Bacteria 4387
171 Ga0207648_10001041 3300026089 Bacteria 31089
172 Ga0207648_10002070 3300026089 Bacteria 21873
173 Ga0207648_10051751 3300026089 Bacteria 3590
174 Ga0207676_10020658 3300026095 Bacteria 4821
175 Ga0207676_10021578 3300026095 Bacteria 4726
176 Ga0207674_10010063 3300026116 Bacteria 10754
177 Ga0207674_10030689 3300026116 Bacteria 5650
178 Ga0207675_100013003 3300026118 Bacteria 7769
179 Ga0207675_100013520 3300026118 Bacteria 7617
180 Ga0207675_100021199 3300026118 Bacteria 6054
181 Ga0207675_100023134 3300026118 Bacteria 5779
182 Ga0207683_10000494 3300026121 Bacteria 36475
183 Ga0207698_10014563 3300026142 Bacteria 5234
184 Ga0268264_10002486 3300028381 Bacteria 16198
185 Ga0268264_10003111 3300028381 Bacteria 14374
186 Ga0268264_10017900 3300028381 Bacteria 5798
187 Ga0307515_10000010 3300028794 Bacteria 651586
188 Ga0307515_10000024 3300028794 Bacteria 393119
189 Ga0265327_10001652 3300031251 Bacteria 26892
190 Ga0265327_10002957 3300031251 Bacteria 16978
191 Ga0307513_10016598 3300031456 Bacteria 8874
192 Ga0307513_10103400 3300031456 Bacteria 2865
193 Ga0307408_100000078 3300031548 Bacteria 108116
194 Ga0307408_100000164 3300031548 Bacteria 73855
195 Ga0307408_100002506 3300031548 Bacteria 12838
196 Ga0307408_100007132 3300031548 Bacteria 7396
197 Ga0373955_0011216 3300035172 Bacteria 4260
198 Ga0395899_0000011 3300037312 Bacteria 521331
199 Ga0395900_0006287 3300037418 Bacteria 12391
200 Ga0395905_0000208 3300037471 Bacteria 91236
201 Ga0395905_0000986 3300037471 Bacteria 36496
202 Ga0395901_0064435 3300038443 Bacteria 3815
203 Ga0436365_0955601 3300039437 Bacteria 10627
204 Ga0436365_1345967 3300039437 Bacteria 27431
205 Ga0451577_0000217 3300042876 Bacteria 119582
206 Ga0466972_0000025 3300044658 Bacteria 186601
207 Ga0453684_0061533 3300044712 Bacteria 4819
208 Ga0466970_0001906 3300044765 Bacteria 10080
209 Ga0466959_0033771 3300045049 Bacteria 3784
210 Ga0451576_0006682 3300045051 Bacteria 14074
211 Ga0495650_0020548 3300046471 Bacteria 3216
212 Ga0495606_0016477 3300046507 Bacteria 5631
213 Ga0495608_0007900 3300046511 Bacteria 7475
214 Ga0495628_0043228 3300046516 Bacteria 3590
215 Ga0495648_0012967 3300046524 Bacteria 6187
216 Ga0495668_0000367 3300046616 Bacteria 59531
217 Ga0495668_0000419 3300046616 Bacteria 55322
218 Ga0495684_0008206 3300047471 Bacteria 8084
219 Ga0495686_0000249 3300047472 Bacteria 96604
220 Ga0495686_0004956 3300047472 Bacteria 10712
221 Ga0496114_0031654 3300048917 Unclassified 4351
222 Ga0501034_0000002 3300049571 Bacteria 565510
223 Ga0501223_002365 3300049663 Unclassified 4206
224 Ga0501223_004239 3300049663 Unclassified 3082
225 nmdc:mga09592_31584_c1 3300050508 Bacteria 4413
226 Ga0500635_0002703 3300053080 Bacteria 4399
227 Ga0500608_002198 3300053122 Bacteria 7031
228 Ga0500559_0025617 3300053136 Bacteria 2510
229 Ga0500568_0003381 3300053139 Bacteria 8919
230 Ga0500616_0001228 3300053153 Bacteria 25762
231 Ga0500627_0007505 3300053158 Bacteria 3804
232 Ga0500611_000013 3300053727 Bacteria 135447

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300026067 Ga0207678_10052525 Ga0207678_100525252 696
2 3300003323 rootH1_10024310 rootH1_1002431026 743
3 3300026078 Ga0207702_10000023 Ga0207702_100000231 782
4 3300013308 Ga0157375_10014757 Ga0157375_100147575 797
5 3300037418 Ga0395900_0006287 Ga0395900_0006287_57_2456 799
6 3300013102 Ga0157371_10026339 Ga0157371_100263392 819
7 3300053136 Ga0500559_0025617 Ga0500559_0025617_21_2498 824
8 3300013297 Ga0157378_10046536 Ga0157378_100465362 838
9 3300053139 Ga0500568_0003381 Ga0500568_0003381_1189_3756 839
10 3300013306 Ga0163162_10116909 Ga0163162_101169092 840
11 iso_pu_bacteria 2945924605 2945926645 843
12 3300038443 Ga0395901_0064435 Ga0395901_0064435_10_2544 844
13 3300009174 Ga0105241_10004791 Ga0105241_100047915 845
14 3300009545 Ga0105237_10010148 Ga0105237_100101488 845
15 3300014968 Ga0157379_10016487 Ga0157379_100164875 845
16 3300013297 Ga0157378_10000837 Ga0157378_100008372 850
17 3300048917 Ga0496114_0031654 Ga0496114_0031654_539_3100 850
18 3300005614 Ga0068856_100032379 Ga0068856_1000323792 851
19 3300005719 Ga0068861_100047839 Ga0068861_1000478393 851
20 3300009174 Ga0105241_10020365 Ga0105241_100203653 851
21 3300009545 Ga0105237_10005649 Ga0105237_1000564913 851
22 3300009545 Ga0105237_10066322 Ga0105237_100663223 851
23 3300010375 Ga0105239_10000069 Ga0105239_10000069105 851
24 3300013102 Ga0157371_10026654 Ga0157371_100266542 851
25 3300013105 Ga0157369_10019117 Ga0157369_100191176 851
26 3300026118 Ga0207675_100023134 Ga0207675_1000231344 851
27 3300005459 Ga0068867_100003552 Ga0068867_1000035526 852
28 3300025937 Ga0207669_10014063 Ga0207669_100140633 852
29 3300026089 Ga0207648_10002070 Ga0207648_100020706 852
30 3300049571 Ga0501034_0000002 Ga0501034_0000002_513860_516436 855
31 3300005333 Ga0070677_10002957 Ga0070677_100029574 856
32 3300009093 Ga0105240_10000128 Ga0105240_1000012847 856
33 3300009545 Ga0105237_10001259 Ga0105237_1000125916 856
34 3300010375 Ga0105239_10013691 Ga0105239_100136915 856
35 3300025913 Ga0207695_10000179 Ga0207695_10000179133 856
36 3300025914 Ga0207671_10000856 Ga0207671_1000085616 856
37 3300025940 Ga0207691_10006449 Ga0207691_100064493 856
38 3300005577 Ga0068857_100033534 Ga0068857_1000335343 857
39 3300005617 Ga0068859_100044290 Ga0068859_1000442903 857
40 3300006931 Ga0097620_100044289 Ga0097620_1000442894 857
41 3300009101 Ga0105247_10001222 Ga0105247_1000122210 857
42 3300025900 Ga0207710_10002271 Ga0207710_100022716 857
43 3300046616 Ga0495668_0000419 Ga0495668_0000419_39510_42128 857
44 3300053153 Ga0500616_0001228 Ga0500616_0001228_6336_8954 857
45 3300053158 Ga0500627_0007505 Ga0500627_0007505_794_3412 857
46 3300005329 Ga0070683_100006858 Ga0070683_1000068582 858
47 3300005530 Ga0070679_100011686 Ga0070679_1000116863 859
48 3300006358 Ga0068871_100031703 Ga0068871_1000317032 859
49 3300009101 Ga0105247_10031481 Ga0105247_100314812 860
50 3300013307 Ga0157372_10001484 Ga0157372_100014845 861
51 3300039437 Ga0436365_0955601 Ga0436365_0955601_6631_9261 861
52 3300005471 Ga0070698_100011518 Ga0070698_1000115185 862
53 3300031456 Ga0307513_10016598 Ga0307513_100165985 862
54 3300002459 JGI24751J29686_10000727 JGI24751J29686_100007272 863
55 3300005618 Ga0068864_100028828 Ga0068864_1000288283 863
56 3300009553 Ga0105249_10013556 Ga0105249_100135563 863
57 3300013306 Ga0163162_10012376 Ga0163162_100123762 863
58 3300026089 Ga0207648_10051751 Ga0207648_100517512 863
59 3300026095 Ga0207676_10021578 Ga0207676_100215783 863
60 3300002737 JGI25162J39368_1001329 JGI25162J39368_100132911 864
61 3300005290 Ga0065712_10001055 Ga0065712_100010557 864
62 3300005331 Ga0070670_100022521 Ga0070670_1000225214 864
63 3300005347 Ga0070668_100008523 Ga0070668_1000085236 864
64 3300005353 Ga0070669_100001361 Ga0070669_1000013619 864
65 3300005354 Ga0070675_100003755 Ga0070675_1000037559 864
66 3300005577 Ga0068857_100014043 Ga0068857_1000140433 864
67 3300005844 Ga0068862_100008324 Ga0068862_1000083245 864
68 3300009094 Ga0111539_10008650 Ga0111539_100086505 864
69 3300014326 Ga0157380_10009053 Ga0157380_100090535 864
70 3300014745 Ga0157377_10002857 Ga0157377_100028575 864
71 3300025942 Ga0207689_10002889 Ga0207689_1000288916 864
72 3300025960 Ga0207651_10014396 Ga0207651_100143963 864
73 3300026116 Ga0207674_10010063 Ga0207674_100100633 864
74 3300026118 Ga0207675_100013520 Ga0207675_1000135205 864
75 3300003203 JGI25406J46586_10001143 JGI25406J46586_100011434 865
76 3300005985 Ga0081539_10001463 Ga0081539_1000146332 865
77 3300053727 Ga0500611_000013 Ga0500611_000013_208_2841 865
78 3300005366 Ga0070659_100026316 Ga0070659_1000263162 866
79 3300005539 Ga0068853_100025131 Ga0068853_1000251312 866
80 3300005563 Ga0068855_100000021 Ga0068855_100000021202 866
81 3300005577 Ga0068857_100005708 Ga0068857_1000057082 866
82 3300025920 Ga0207649_10001324 Ga0207649_1000132411 866
83 3300025932 Ga0207690_10010562 Ga0207690_100105624 866
84 3300025945 Ga0207679_10000534 Ga0207679_1000053417 866
85 3300025949 Ga0207667_10000014 Ga0207667_10000014411 866
86 3300026041 Ga0207639_10017797 Ga0207639_100177972 866
87 3300026116 Ga0207674_10030689 Ga0207674_100306892 866
88 iso_pu_bacteria 2739367656 2739614852 866
89 3300005334 Ga0068869_100039973 Ga0068869_1000399731 868
90 3300005466 Ga0070685_10026448 Ga0070685_100264482 868
91 3300005471 Ga0070698_100005064 Ga0070698_10000506412 868
92 3300005617 Ga0068859_100027467 Ga0068859_1000274672 868
93 3300006844 Ga0075428_100015198 Ga0075428_1000151984 868
94 3300006844 Ga0075428_100028119 Ga0075428_1000281193 868
95 3300006846 Ga0075430_100042282 Ga0075430_1000422825 868
96 3300006847 Ga0075431_100015938 Ga0075431_1000159384 868
97 3300006880 Ga0075429_100005844 Ga0075429_1000058449 868
98 3300006931 Ga0097620_100027467 Ga0097620_1000274674 868
99 3300009147 Ga0114129_10056282 Ga0114129_100562823 868
100 3300009176 Ga0105242_10002400 Ga0105242_100024003 868
101 3300009176 Ga0105242_10024590 Ga0105242_100245901 868
102 3300025934 Ga0207686_10000715 Ga0207686_1000071513 868
103 3300025942 Ga0207689_10066018 Ga0207689_100660182 868
104 3300025961 Ga0207712_10001188 Ga0207712_100011889 868
105 3300026088 Ga0207641_10000213 Ga0207641_1000021364 868
106 3300031548 Ga0307408_100000078 Ga0307408_10000007855 868
107 3300050508 nmdc:mga09592_31584_c1 nmdc:mga09592_31584_c1_11_2659 868
108 3300005335 Ga0070666_10000131 Ga0070666_1000013131 869
109 3300005367 Ga0070667_100006586 Ga0070667_1000065864 869
110 3300005616 Ga0068852_100006176 Ga0068852_1000061767 869
111 3300005617 Ga0068859_100000099 Ga0068859_1000000996 869
112 3300005841 Ga0068863_100020140 Ga0068863_1000201402 869
113 3300005843 Ga0068860_100005482 Ga0068860_1000054828 869
114 3300006931 Ga0097620_100000099 Ga0097620_1000000996 869
115 3300009101 Ga0105247_10005361 Ga0105247_100053612 869
116 3300025903 Ga0207680_10000189 Ga0207680_1000018921 869
117 3300025914 Ga0207671_10003842 Ga0207671_100038425 869
118 3300025931 Ga0207644_10031037 Ga0207644_100310371 869
119 3300025942 Ga0207689_10003874 Ga0207689_100038744 869
120 3300025961 Ga0207712_10005464 Ga0207712_100054642 869
121 3300026035 Ga0207703_10004278 Ga0207703_100042787 869
122 3300026088 Ga0207641_10001381 Ga0207641_100013815 869
123 3300026142 Ga0207698_10014563 Ga0207698_100145633 869
124 3300028381 Ga0268264_10002486 Ga0268264_100024865 869
125 3300005337 Ga0070682_100000101 Ga0070682_10000010147 870
126 3300005339 Ga0070660_100029212 Ga0070660_1000292122 870
127 3300005530 Ga0070679_100002459 Ga0070679_1000024595 870
128 3300005617 Ga0068859_100000575 Ga0068859_1000005754 870
129 3300006358 Ga0068871_100033771 Ga0068871_1000337712 870
130 3300006931 Ga0097620_100000575 Ga0097620_1000005754 870
131 3300013306 Ga0163162_10016023 Ga0163162_100160233 870
132 3300025909 Ga0207705_10032406 Ga0207705_100324063 870
133 3300025919 Ga0207657_10038696 Ga0207657_100386962 870
134 3300026088 Ga0207641_10031665 Ga0207641_100316652 870
135 3300028794 Ga0307515_10000024 Ga0307515_10000024318 870
136 3300031251 Ga0265327_10001652 Ga0265327_1000165215 870
137 3300046616 Ga0495668_0000367 Ga0495668_0000367_31275_33896 870
138 iso_pu_bacteria 2839989709 2839991189 870
139 3300003323 rootH1_10248937 rootH1_102489373 871
140 3300005355 Ga0070671_100075202 Ga0070671_1000752021 871
141 3300013104 Ga0157370_10014457 Ga0157370_100144572 871
142 3300013297 Ga0157378_10007685 Ga0157378_100076851 871
143 3300026088 Ga0207641_10031419 Ga0207641_100314191 871
144 3300028794 Ga0307515_10000010 Ga0307515_1000001043 871
145 3300037312 Ga0395899_0000011 Ga0395899_0000011_385230_387848 871
146 iso_pu_bacteria 2839989709 2839990852 871
147 3300003320 rootH2_10012129 rootH2_100121295 872
148 3300005618 Ga0068864_100009231 Ga0068864_1000092315 872
149 3300005843 Ga0068860_100018767 Ga0068860_1000187673 872
150 3300005844 Ga0068862_100041691 Ga0068862_1000416913 872
151 3300026095 Ga0207676_10020658 Ga0207676_100206582 872
152 3300028381 Ga0268264_10017900 Ga0268264_100179002 872
153 3300037471 Ga0395905_0000208 Ga0395905_0000208_39167_41788 872
154 3300042876 Ga0451577_0000217 Ga0451577_0000217_55772_58390 872
155 3300005330 Ga0070690_100018975 Ga0070690_1000189752 873
156 3300005335 Ga0070666_10014726 Ga0070666_100147262 873
157 3300005338 Ga0068868_100021241 Ga0068868_1000212413 873
158 3300005339 Ga0070660_100001327 Ga0070660_1000013279 873
159 3300005344 Ga0070661_100025256 Ga0070661_1000252562 873
160 3300005365 Ga0070688_100006087 Ga0070688_1000060872 873
161 3300005367 Ga0070667_100013378 Ga0070667_1000133783 873
162 3300005457 Ga0070662_100016018 Ga0070662_1000160182 873
163 3300005457 Ga0070662_100056740 Ga0070662_1000567402 873
164 3300005535 Ga0070684_100024709 Ga0070684_1000247093 873
165 3300005564 Ga0070664_100000856 Ga0070664_10000085617 873
166 3300005617 Ga0068859_100048000 Ga0068859_1000480001 873
167 3300005718 Ga0068866_10026605 Ga0068866_100266051 873
168 3300006237 Ga0097621_100036178 Ga0097621_1000361782 873
169 3300006931 Ga0097620_100048000 Ga0097620_1000480004 873
170 3300009093 Ga0105240_10000011 Ga0105240_10000011215 873
171 3300010375 Ga0105239_10000052 Ga0105239_1000005292 873
172 3300013296 Ga0157374_10040206 Ga0157374_100402062 873
173 3300013306 Ga0163162_10024360 Ga0163162_100243606 873
174 3300014325 Ga0163163_10000816 Ga0163163_100008162 873
175 3300014969 Ga0157376_10050183 Ga0157376_100501832 873
176 3300014969 Ga0157376_10079133 Ga0157376_100791331 873
177 3300025913 Ga0207695_10000010 Ga0207695_10000010605 873
178 3300025919 Ga0207657_10007596 Ga0207657_100075965 873
179 3300025933 Ga0207706_10065876 Ga0207706_100658761 873
180 3300035172 Ga0373955_0011216 Ga0373955_0011216_1481_4111 873
181 3300046511 Ga0495608_0007900 Ga0495608_0007900_1720_4350 873
182 3300046516 Ga0495628_0043228 Ga0495628_0043228_370_3000 873
183 3300047471 Ga0495684_0008206 Ga0495684_0008206_2802_5432 873
184 3300049663 Ga0501223_004239 Ga0501223_004239_48_2672 873
185 3300005329 Ga0070683_100072219 Ga0070683_1000722191 874
186 3300005355 Ga0070671_100039889 Ga0070671_1000398891 874
187 3300005616 Ga0068852_100030870 Ga0068852_1000308702 874
188 3300005843 Ga0068860_100021752 Ga0068860_1000217523 874
189 3300013307 Ga0157372_10007627 Ga0157372_100076277 874
190 3300028381 Ga0268264_10003111 Ga0268264_100031116 874
191 3300005327 Ga0070658_10000069 Ga0070658_1000006974 875
192 3300005458 Ga0070681_10073542 Ga0070681_100735421 875
193 3300005563 Ga0068855_100000387 Ga0068855_10000038720 875
194 3300005563 Ga0068855_100008447 Ga0068855_10000844711 875
195 3300005614 Ga0068856_100000006 Ga0068856_10000000617 875
196 3300005614 Ga0068856_100012915 Ga0068856_1000129155 875
197 3300009545 Ga0105237_10000782 Ga0105237_1000078221 875
198 3300013100 Ga0157373_10016898 Ga0157373_100168983 875
199 3300014326 Ga0157380_10023351 Ga0157380_100233514 875
200 3300025231 Ga0207427_100072 Ga0207427_10007299 875
201 3300025233 Ga0209437_100026 Ga0209437_100026243 875
202 3300025261 Ga0209233_1000111 Ga0209233_1000111137 875
203 3300025909 Ga0207705_10000032 Ga0207705_1000003218 875
204 3300025914 Ga0207671_10001617 Ga0207671_100016175 875
205 3300025949 Ga0207667_10001788 Ga0207667_1000178818 875
206 3300026078 Ga0207702_10009754 Ga0207702_100097542 875
207 3300037471 Ga0395905_0000986 Ga0395905_0000986_17403_20030 875
208 3300045049 Ga0466959_0033771 Ga0466959_0033771_576_3203 875
209 3300046524 Ga0495648_0012967 Ga0495648_0012967_1280_3907 875
210 3300047472 Ga0495686_0000249 Ga0495686_0000249_73879_76560 875
211 3300053080 Ga0500635_0002703 Ga0500635_0002703_1600_4227 875
212 3300053122 Ga0500608_002198 Ga0500608_002198_856_3483 875
213 3300013296 Ga0157374_10005636 Ga0157374_100056366 876
214 3300031456 Ga0307513_10103400 Ga0307513_101034001 876
215 3300049663 Ga0501223_002365 Ga0501223_002365_122_2752 876
216 3300005718 Ga0068866_10007524 Ga0068866_100075242 877
217 3300005843 Ga0068860_100013625 Ga0068860_1000136259 877
218 3300006237 Ga0097621_100030421 Ga0097621_1000304212 877
219 3300026089 Ga0207648_10001041 Ga0207648_1000104123 877
220 3300026118 Ga0207675_100021199 Ga0207675_1000211993 877
221 3300026121 Ga0207683_10000494 Ga0207683_1000049412 877
222 3300031251 Ga0265327_10002957 Ga0265327_100029576 877
223 3300039437 Ga0436365_1345967 Ga0436365_1345967_3161_5797 877
224 3300044658 Ga0466972_0000025 Ga0466972_0000025_21860_24520 877
225 3300044765 Ga0466970_0001906 Ga0466970_0001906_5977_8637 877
226 3300031548 Ga0307408_100002506 Ga0307408_10000250610 878
227 3300031548 Ga0307408_100007132 Ga0307408_1000071322 878
228 3300044712 Ga0453684_0061533 Ga0453684_0061533_20_2668 878
229 3300045051 Ga0451576_0006682 Ga0451576_0006682_4921_7572 878
230 3300047472 Ga0495686_0004956 Ga0495686_0004956_5392_8139 878
231 3300001990 JGI24737J22298_10000195 JGI24737J22298_1000019511 879
232 3300005339 Ga0070660_100019938 Ga0070660_1000199384 879
233 3300026118 Ga0207675_100013003 Ga0207675_1000130033 879
234 3300031548 Ga0307408_100000164 Ga0307408_10000016421 879
235 3300046471 Ga0495650_0020548 Ga0495650_0020548_30_2675 879
236 3300046507 Ga0495606_0016477 Ga0495606_0016477_2228_4867 879

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18921

Cyanophycin_syn

Cyanophycin synthase-like N-terminal domain

58

173

0.98

PF02222

ATP-grasp

ATP-grasp domain

259

346

0.89

PF07478

Dala_Dala_lig_C

D-ala D-ala ligase C-terminus

258

357

0.81

PF08245

Mur_ligase_M

Mur ligase middle domain

522

733

0.81

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

251

403

0.78

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

760

887

0.76

PF08443

RimK

RimK-like ATP-grasp domain

249

367

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
7waf-assembly1.cif.gz_B trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.9409 1 863
7waf-assembly1.cif.gz_C trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.9351 1 718
7waf-assembly1.cif.gz_C trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.9265 1 718
7waf-assembly1.cif.gz_B trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.9254 1 863
7lgj-assembly1.cif.gz_A cyanophycin synthetase 1 from synechocystis sp. utex2470 with adpcp and 8x(asp-arg)-nh2 0.9087 1 863
ID Description Score Start End Superfamily
af_Q58881_123_195_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.9018 229 294 3.30.1490.20
1bxrG07 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.9012 234 297 3.30.1490.20
2wtzA03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.8817 724 850 3.90.190.20
3lk7A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.8742 482 715 3.40.1190.10
af_A4I7A2_198_259_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8687 237 297 3.30.1490.20
ID Description Score Start End GO Terms
AF-A0A357N9Q1-F1-model_v4 Cyanophycin synthetase 0.9902 482 576 GO:0004326
GO:0005524
AF-A0A519Y7I8-F1-model_v4 Cyanophycin synthetase 0.9866 722 870 GO:0009058
GO:0016881
AF-A0A7W1Z7H5-F1-model_v4 Cyanophycin synthetase 0.9846 551 869 GO:0005524
GO:0009058
GO:0016881
AF-A0A4V1UC98-F1-model_v4 Cyanophycin synthetase 0.9835 474 871 GO:0005524
GO:0009058
GO:0016881
AF-A0A357N9Q1-F1-model_v4 Cyanophycin synthetase 0.9799 482 576 GO:0004326
GO:0005524

Feature Viewer

pLDDT pTM Quality
90.93 0.86 High
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Predicted Structure (AlphaFold2)

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