F349347

General Info

Members Datasets Scaffolds Average Seq Length
236 155 472 458

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0003475|Ga0495638_0003475_5828_7276
Length 482
Sequence MSTPQHSSAPPSIPVLAPGHTSASITDKISDIVLQWKAPIRWCLGFTVGFLMLQGLMLAIYMLLFTGVGVWGINIPVGWGFDIINFVWWIGIGHAGTLISAILLLFRQQWRTSINRAAEAMTLFAVACALLFPIFHTGRPWLAAYWLLPYPNTMGVWPQFRSPLIWDVFAVSTYGTVSALFWFTGLIPDLATLRDRAKTRVGQVIYGGLALGWRGSARHWQIYETAYLILAGLSTPLVLSVHTVVSFDFAVSLLPGWHATIFPPYFVAGAIYSGFAMVLTLLIPMRAIYGLQDMITLRHLESMAKVTLVTGLIVFYGYAMEAFFGWYSANEFEKFMIHNRMTGPYWYMYWTLIFCNGLMPQILWFKKIRLSPVILFCVSIVVNIGMWLERYVIIVTSLHRDFLPSSWGMYQGSRYDWSFYIGTMGLFLTLFYLFVRVLPMIAMFEMRMLLPGSHPHKEALAAAGAGDIEVGESGLPSADDEK

Samples

Sample ID Description Type Environment
1 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
54 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
78 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
87 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
88 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
89 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
98 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
116 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
117 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
121 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
122 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
123 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
124 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
125 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
126 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
131 3300049770 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
135 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
136 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
137 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
145 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
147 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
150 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
151 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
152 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
153 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0.42
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.08
Nodule 0
Rhizoplane 1.27
Rhizosphere 90.25
Stem 0
Stem Tuber 0
Unclassified 0.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495638_0003475 3300046460 Bacteria 12376
2 SwRhRL2b_contig_81419 2162886007 Bacteria 1643
3 JGI25405J52794_10012196 3300003911 Bacteria 1652
4 Ga0065704_10002452 3300005289 Bacteria 5940
5 Ga0065712_10003870 3300005290 Bacteria 4098
6 Ga0065712_10079843 3300005290 Bacteria 3173
7 Ga0065707_10153839 3300005295 Bacteria 1627
8 Ga0070677_10007746 3300005333 Bacteria 3597
9 Ga0068869_100036064 3300005334 Bacteria 3509
10 Ga0070680_100121673 3300005336 Bacteria 2179
11 Ga0070680_100192193 3300005336 Bacteria 1720
12 Ga0068868_100264095 3300005338 Bacteria 1453
13 Ga0070671_100204334 3300005355 Bacteria 1675
14 Ga0070674_100089971 3300005356 Unclassified 2213
15 Ga0070714_100015088 3300005435 Bacteria 6212
16 Ga0070713_100004743 3300005436 Bacteria 9192
17 Ga0070700_100024477 3300005441 Bacteria 3545
18 Ga0070681_10100529 3300005458 Bacteria 2838
19 Ga0070699_100096757 3300005518 Bacteria 2585
20 Ga0070696_100004345 3300005546 Bacteria 9446
21 Ga0070664_100030023 3300005564 Bacteria 4533
22 Ga0068857_100242600 3300005577 Bacteria 1650
23 Ga0068856_100028270 3300005614 Bacteria 5475
24 Ga0070702_100103571 3300005615 Bacteria 1750
25 Ga0068860_100078128 3300005843 Bacteria 3148
26 Ga0081455_10000777 3300005937 Bacteria 41065
27 Ga0081538_10030191 3300005981 Bacteria 3685
28 Ga0070717_10064806 3300006028 Bacteria 3036
29 Ga0075368_10036864 3300006042 Bacteria 1911
30 Ga0075364_10066181 3300006051 Bacteria 2374
31 Ga0075432_10024437 3300006058 Bacteria 2071
32 Ga0075367_10015428 3300006178 Bacteria 4152
33 Ga0075367_10031522 3300006178 Bacteria 3044
34 Ga0075366_10002938 3300006195 Bacteria 8863
35 Ga0075366_10035830 3300006195 Bacteria 2925
36 Ga0068871_100035324 3300006358 Bacteria 3971
37 Ga0075428_100011214 3300006844 Bacteria 9974
38 Ga0075428_100071085 3300006844 Bacteria 3804
39 Ga0075430_100027940 3300006846 Bacteria 4791
40 Ga0075430_100061962 3300006846 Bacteria 3143
41 Ga0075431_100005491 3300006847 Bacteria 12519
42 Ga0075431_100021962 3300006847 Bacteria 6525
43 Ga0075431_100031946 3300006847 Bacteria 5424
44 Ga0075431_100043660 3300006847 Bacteria 4624
45 Ga0075433_10032663 3300006852 Bacteria 4459
46 Ga0075433_10063075 3300006852 Bacteria 3246
47 Ga0075434_100008546 3300006871 Bacteria 9522
48 Ga0075434_100125848 3300006871 Bacteria 2580
49 Ga0075429_100001273 3300006880 Bacteria 20512
50 Ga0075429_100023423 3300006880 Bacteria 5359
51 Ga0075436_100002310 3300006914 Bacteria 13148
52 Ga0075436_100135064 3300006914 Bacteria 1731
53 Ga0105240_10016071 3300009093 Bacteria 10141
54 Ga0105245_10101252 3300009098 Bacteria 2666
55 Ga0114129_10007873 3300009147 Bacteria 15162
56 Ga0114129_10009458 3300009147 Bacteria 13893
57 Ga0114129_10040376 3300009147 Bacteria 6577
58 Ga0114129_10055020 3300009147 Bacteria 5577
59 Ga0105241_10026114 3300009174 Bacteria 4343
60 Ga0105242_10011377 3300009176 Bacteria 6841
61 Ga0105248_10028346 3300009177 Bacteria 6239
62 Ga0105237_10010353 3300009545 Bacteria 9930
63 Ga0105238_10003786 3300009551 Bacteria 15032
64 Ga0157370_10103869 3300013104 Bacteria 2660
65 Ga0157378_10007804 3300013297 Bacteria 9340
66 Ga0157375_10157925 3300013308 Bacteria 2408
67 Ga0157380_10005751 3300014326 Bacteria 8676
68 Ga0213876_10000083 3300021384 Bacteria 107933
69 Ga0213876_10000280 3300021384 Bacteria 46817
70 Ga0213875_10001503 3300021388 Bacteria 15001
71 Ga0207688_10070333 3300025901 Bacteria 1984
72 Ga0207643_10059141 3300025908 Bacteria 2186
73 Ga0207684_10039117 3300025910 Bacteria 4025
74 Ga0207654_10045066 3300025911 Bacteria 2508
75 Ga0207707_10071783 3300025912 Bacteria 3018
76 Ga0207707_10141009 3300025912 Bacteria 2107
77 Ga0207695_10140677 3300025913 Bacteria 2362
78 Ga0207693_10116738 3300025915 Bacteria 2095
79 Ga0207694_10010908 3300025924 Bacteria 6863
80 Ga0207664_10033958 3300025929 Bacteria 3925
81 Ga0207686_10005211 3300025934 Bacteria 6981
82 Ga0207711_10039889 3300025941 Bacteria 3994
83 Ga0207711_10309407 3300025941 Bacteria 1458
84 Ga0207689_10045491 3300025942 Bacteria 3629
85 Ga0207679_10016060 3300025945 Bacteria 4964
86 Ga0207668_10211736 3300025972 Bacteria 1551
87 Ga0207678_10051022 3300026067 Bacteria 3572
88 Ga0207708_10007634 3300026075 Bacteria 8002
89 Ga0207702_10037783 3300026078 Bacteria 4043
90 Ga0207648_10132060 3300026089 Bacteria 2198
91 Ga0207676_10019159 3300026095 Bacteria 4987
92 Ga0207676_10128155 3300026095 Bacteria 2153
93 Ga0207674_10306578 3300026116 Bacteria 1537
94 Ga0207683_10041422 3300026121 Bacteria 4021
95 Ga0209971_1009948 3300027682 Bacteria 2250
96 Ga0207428_10000518 3300027907 Bacteria 46060
97 Ga0307509_10099465 3300031507 Bacteria 2950
98 Ga0307405_10063330 3300031731 Bacteria 2345
99 Ga0307410_10015052 3300031852 Bacteria 4575
100 Ga0307406_10024234 3300031901 Bacteria 3622
101 Ga0307407_10034785 3300031903 Bacteria 2762
102 Ga0307409_100012983 3300031995 Bacteria 5336
103 Ga0307409_100066504 3300031995 Bacteria 2842
104 Ga0307409_100136546 3300031995 Bacteria 2105
105 Ga0307416_100023400 3300032002 Bacteria 4482
106 Ga0307416_100097603 3300032002 Bacteria 2545
107 Ga0307411_10014078 3300032005 Bacteria 4439
108 Ga0307415_100039445 3300032126 Bacteria 3121
109 Ga0373926_0021534 3300035083 Bacteria 2233
110 Ga0373954_0024633 3300035118 Bacteria 2744
111 Ga0373955_0038619 3300035172 Bacteria 2545
112 Ga0373927_0003433 3300035695 Bacteria 11358
113 Ga0373937_0014830 3300036401 Bacteria 6884
114 Ga0373937_0018082 3300036401 Bacteria 6288
115 Ga0373925_0010550 3300037068 Bacteria 6700
116 Ga0373925_0125179 3300037068 Bacteria 1999
117 Ga0436364_0703463 3300037853 Bacteria 1326
118 Ga0436364_0792502 3300037853 Bacteria 8762
119 Ga0436365_0563106 3300039437 Bacteria 187681
120 Ga0436365_1700788 3300039437 Bacteria 98783
121 Ga0439431_0007399 3300041997 Bacteria 2450
122 Ga0453684_0014176 3300044712 Bacteria 12804
123 Ga0453684_0073101 3300044712 Bacteria 4325
124 Ga0451576_0152287 3300045051 Bacteria 2412
125 Ga0451576_0277237 3300045051 Bacteria 1753
126 Ga0495580_0001305 3300046472 Bacteria 22019
127 Ga0495580_0005450 3300046472 Bacteria 10516
128 Ga0496110_0046275 3300048913 Bacteria 3806
129 Ga0496112_0017908 3300048915 Bacteria 6666
130 Ga0496114_0004228 3300048917 Bacteria 11124
131 Ga0501031_0002340 3300049568 Bacteria 12000
132 Ga0501032_0006278 3300049569 Bacteria 8753
133 Ga0501033_0002636 3300049570 Bacteria 15093
134 Ga0501033_0003032 3300049570 Bacteria 13978
135 Ga0501034_0022215 3300049571 Bacteria 6466
136 Ga0501036_0019204 3300049572 Bacteria 5734
137 Ga0501036_0044135 3300049572 Bacteria 3775
138 Ga0501037_0008005 3300049573 Bacteria 7744
139 Ga0501038_0050753 3300049574 Bacteria 3583
140 Ga0501039_0000444 3300049575 Bacteria 30061
141 Ga0501039_0038145 3300049575 Bacteria 3711
142 Ga0501039_0060742 3300049575 Bacteria 2927
143 Ga0501040_0010676 3300049576 Bacteria 6006
144 Ga0501040_0034020 3300049576 Bacteria 3453
145 Ga0501041_0004406 3300049577 Bacteria 8145
146 Ga0501041_0018101 3300049577 Bacteria 4195
147 Ga0501042_0000113 3300049578 Bacteria 34099
148 Ga0501042_0008956 3300049578 Bacteria 6642
149 Ga0501043_0002394 3300049579 Bacteria 15878
150 Ga0501046_0008820 3300049580 Bacteria 8758
151 Ga0501048_0005229 3300049582 Bacteria 9886
152 Ga0501048_0020102 3300049582 Bacteria 4897
153 Ga0501068_0001152 3300049584 Bacteria 14020
154 Ga0501068_0002097 3300049584 Bacteria 10626
155 Ga0501069_0004503 3300049585 Bacteria 7201
156 Ga0501070_0010026 3300049586 Bacteria 8014
157 Ga0501070_0142832 3300049586 Bacteria 1976
158 Ga0501072_0001120 3300049588 Bacteria 19933
159 Ga0501072_0030160 3300049588 Bacteria 4239
160 Ga0501073_0005928 3300049589 Bacteria 9119
161 Ga0501073_0038098 3300049589 Bacteria 3412
162 Ga0501074_0007436 3300049590 Bacteria 7925
163 Ga0501075_0001035 3300049591 Bacteria 17848
164 Ga0501075_0078081 3300049591 Bacteria 2506
165 Ga0501076_0001002 3300049592 Bacteria 18504
166 Ga0501076_0038008 3300049592 Bacteria 3777
167 Ga0501077_0003149 3300049593 Bacteria 9922
168 Ga0501077_0010434 3300049593 Bacteria 5780
169 Ga0501077_0067116 3300049593 Bacteria 2275
170 Ga0501207_002304 3300049654 Bacteria 2454
171 Ga0501249_012397 3300049679 Bacteria 1801
172 Ga0501257_011657 3300049686 Bacteria 2009
173 Ga0501079_0008070 3300049741 Bacteria 7975
174 Ga0501079_0016952 3300049741 Bacteria 5565
175 Ga0501080_0009479 3300049742 Bacteria 8881
176 Ga0501080_0033489 3300049742 Bacteria 4795
177 Ga0501081_0000575 3300049743 Bacteria 20867
178 Ga0501081_0015183 3300049743 Bacteria 5080
179 Ga0501081_0028835 3300049743 Bacteria 3748
180 Ga0501083_0004892 3300049744 Bacteria 9473
181 Ga0501083_0009565 3300049744 Bacteria 6849
182 Ga0501273_001210 3300049770 Bacteria 2396
183 Ga0501035_0010824 3300049822 Bacteria 8447
184 Ga0501035_0055313 3300049822 Bacteria 3543
185 Ga0501044_0044621 3300049823 Bacteria 4599
186 Ga0501045_0039064 3300049824 Bacteria 3453
187 Ga0501045_0077911 3300049824 Bacteria 2443
188 nmdc:mga0k408_1954_c1 3300050493 Bacteria 11043
189 nmdc:mga0k408_37992_c2 3300050493 Bacteria 1277
190 nmdc:mga06z11_39044_c1 3300050494 Bacteria 2361
191 nmdc:mga07m45_50770_c1 3300050496 Bacteria 2338
192 nmdc:mga07m45_63244_c1 3300050496 Bacteria 2099
193 nmdc:mga05p37_23993_c1 3300050507 Bacteria 7408
194 nmdc:mga05p37_2525_c2 3300050507 Bacteria 14455
195 nmdc:mga05p37_3418_c1 3300050507 Bacteria 18527
196 nmdc:mga05p37_387078_c1 3300050507 Bacteria 1637
197 nmdc:mga05p37_418095_c1 3300050507 Bacteria 1561
198 nmdc:mga05p37_70027_c1 3300050507 Bacteria 4315
199 nmdc:mga05p37_92035_c1 3300050507 Bacteria 3737
200 nmdc:mga09592_128310_c1 3300050508 Bacteria 2181
201 nmdc:mga09592_185285_c1 3300050508 Bacteria 1801
202 nmdc:mga09592_216938_c1 3300050508 Bacteria 1658
203 nmdc:mga09592_339395_c1 3300050508 Bacteria 1301
204 nmdc:mga09592_5875_c1 3300050508 Bacteria 10017
205 nmdc:mga0qj67_132988_c1 3300050509 Bacteria 2015
206 nmdc:mga0qj67_2012_c1 3300050509 Bacteria 14499
207 nmdc:mga0qj67_42648_c1 3300050509 Bacteria 3571
208 nmdc:mga06r32_27297_c1 3300050510 Bacteria 5331
209 nmdc:mga06r32_3477_c1 3300050510 Bacteria 14064
210 nmdc:mga06r32_75885_c1 3300050510 Bacteria 3264
211 nmdc:mga06r32_79288_c1 3300050510 Bacteria 3194
212 nmdc:mga06r32_9653_c1 3300050510 Bacteria 8717
213 nmdc:mga08y16_16472_c1 3300050511 Bacteria 7774
214 nmdc:mga08y16_17001_c1 3300050511 Bacteria 7660
215 nmdc:mga0n895_149860_c1 3300050512 Bacteria 2362
216 nmdc:mga0n895_641_c1 3300050512 Bacteria 24344
217 nmdc:mga0n895_96808_c1 3300050512 Bacteria 2956
218 nmdc:mga0rr50_100246_c1 3300050513 Bacteria 2274
219 nmdc:mga08x19_302_c1 3300050514 Bacteria 36231
220 nmdc:mga08x19_51340_c1 3300050514 Bacteria 2649
221 nmdc:mga0a205_16902_c1 3300050515 Bacteria 6830
222 nmdc:mga0a205_40782_c1 3300050515 Bacteria 4470
223 nmdc:mga0a205_60978_c1 3300050515 Bacteria 3643
224 Ga0500646_0010017 3300053090 Bacteria 2429
225 Ga0501084_0012760 3300054114 Bacteria 6960
226 Ga0501084_0024042 3300054114 Bacteria 5082
227 Ga0501084_0032877 3300054114 Bacteria 4340
228 Ga0590071_000202 3300059421 Bacteria 17463
229 Ga0590071_012584 3300059421 Bacteria 1982
230 Ga0590074_000176 3300059423 Bacteria 7937
231 Ga0590075_000136 3300059424 Bacteria 19187
232 Ga0590077_001376 3300059426 Bacteria 5731
233 Ga0587073_0003885 3300059492 Bacteria 2095
234 Ga0501082_0002258 3300060353 Bacteria 16874
235 Ga0501082_0095235 3300060353 Bacteria 2572
236 Ga0530510_0022137 3300061734 Bacteria 4526
237 Ga0495638_0003475
238 SwRhRL2b_contig_81419
239 JGI25405J52794_10012196
240 Ga0065704_10002452
241 Ga0065712_10003870
242 Ga0065712_10079843
243 Ga0065707_10153839
244 Ga0070677_10007746
245 Ga0068869_100036064
246 Ga0070680_100121673
247 Ga0070680_100192193
248 Ga0068868_100264095
249 Ga0070671_100204334
250 Ga0070674_100089971
251 Ga0070714_100015088
252 Ga0070713_100004743
253 Ga0070700_100024477
254 Ga0070681_10100529
255 Ga0070699_100096757
256 Ga0070696_100004345
257 Ga0070664_100030023
258 Ga0068857_100242600
259 Ga0068856_100028270
260 Ga0070702_100103571
261 Ga0068860_100078128
262 Ga0081455_10000777
263 Ga0081538_10030191
264 Ga0070717_10064806
265 Ga0075368_10036864
266 Ga0075364_10066181
267 Ga0075432_10024437
268 Ga0075367_10015428
269 Ga0075367_10031522
270 Ga0075366_10002938
271 Ga0075366_10035830
272 Ga0068871_100035324
273 Ga0075428_100011214
274 Ga0075428_100071085
275 Ga0075430_100027940
276 Ga0075430_100061962
277 Ga0075431_100005491
278 Ga0075431_100021962
279 Ga0075431_100031946
280 Ga0075431_100043660
281 Ga0075433_10032663
282 Ga0075433_10063075
283 Ga0075434_100008546
284 Ga0075434_100125848
285 Ga0075429_100001273
286 Ga0075429_100023423
287 Ga0075436_100002310
288 Ga0075436_100135064
289 Ga0105240_10016071
290 Ga0105245_10101252
291 Ga0114129_10007873
292 Ga0114129_10009458
293 Ga0114129_10040376
294 Ga0114129_10055020
295 Ga0105241_10026114
296 Ga0105242_10011377
297 Ga0105248_10028346
298 Ga0105237_10010353
299 Ga0105238_10003786
300 Ga0157370_10103869
301 Ga0157378_10007804
302 Ga0157375_10157925
303 Ga0157380_10005751
304 Ga0213876_10000083
305 Ga0213876_10000280
306 Ga0213875_10001503
307 Ga0207688_10070333
308 Ga0207643_10059141
309 Ga0207684_10039117
310 Ga0207654_10045066
311 Ga0207707_10071783
312 Ga0207707_10141009
313 Ga0207695_10140677
314 Ga0207693_10116738
315 Ga0207694_10010908
316 Ga0207664_10033958
317 Ga0207686_10005211
318 Ga0207711_10039889
319 Ga0207711_10309407
320 Ga0207689_10045491
321 Ga0207679_10016060
322 Ga0207668_10211736
323 Ga0207678_10051022
324 Ga0207708_10007634
325 Ga0207702_10037783
326 Ga0207648_10132060
327 Ga0207676_10019159
328 Ga0207676_10128155
329 Ga0207674_10306578
330 Ga0207683_10041422
331 Ga0209971_1009948
332 Ga0207428_10000518
333 Ga0307509_10099465
334 Ga0307405_10063330
335 Ga0307410_10015052
336 Ga0307406_10024234
337 Ga0307407_10034785
338 Ga0307409_100012983
339 Ga0307409_100066504
340 Ga0307409_100136546
341 Ga0307416_100023400
342 Ga0307416_100097603
343 Ga0307411_10014078
344 Ga0307415_100039445
345 Ga0373926_0021534
346 Ga0373954_0024633
347 Ga0373955_0038619
348 Ga0373927_0003433
349 Ga0373937_0014830
350 Ga0373937_0018082
351 Ga0373925_0010550
352 Ga0373925_0125179
353 Ga0436364_0703463
354 Ga0436364_0792502
355 Ga0436365_0563106
356 Ga0436365_1700788
357 Ga0439431_0007399
358 Ga0453684_0014176
359 Ga0453684_0073101
360 Ga0451576_0152287
361 Ga0451576_0277237
362 Ga0495580_0001305
363 Ga0495580_0005450
364 Ga0496110_0046275
365 Ga0496112_0017908
366 Ga0496114_0004228
367 Ga0501031_0002340
368 Ga0501032_0006278
369 Ga0501033_0002636
370 Ga0501033_0003032
371 Ga0501034_0022215
372 Ga0501036_0019204
373 Ga0501036_0044135
374 Ga0501037_0008005
375 Ga0501038_0050753
376 Ga0501039_0000444
377 Ga0501039_0038145
378 Ga0501039_0060742
379 Ga0501040_0010676
380 Ga0501040_0034020
381 Ga0501041_0004406
382 Ga0501041_0018101
383 Ga0501042_0000113
384 Ga0501042_0008956
385 Ga0501043_0002394
386 Ga0501046_0008820
387 Ga0501048_0005229
388 Ga0501048_0020102
389 Ga0501068_0001152
390 Ga0501068_0002097
391 Ga0501069_0004503
392 Ga0501070_0010026
393 Ga0501070_0142832
394 Ga0501072_0001120
395 Ga0501072_0030160
396 Ga0501073_0005928
397 Ga0501073_0038098
398 Ga0501074_0007436
399 Ga0501075_0001035
400 Ga0501075_0078081
401 Ga0501076_0001002
402 Ga0501076_0038008
403 Ga0501077_0003149
404 Ga0501077_0010434
405 Ga0501077_0067116
406 Ga0501207_002304
407 Ga0501249_012397
408 Ga0501257_011657
409 Ga0501079_0008070
410 Ga0501079_0016952
411 Ga0501080_0009479
412 Ga0501080_0033489
413 Ga0501081_0000575
414 Ga0501081_0015183
415 Ga0501081_0028835
416 Ga0501083_0004892
417 Ga0501083_0009565
418 Ga0501273_001210
419 Ga0501035_0010824
420 Ga0501035_0055313
421 Ga0501044_0044621
422 Ga0501045_0039064
423 Ga0501045_0077911
424 nmdc:mga0k408_1954_c1
425 nmdc:mga0k408_37992_c2
426 nmdc:mga06z11_39044_c1
427 nmdc:mga07m45_50770_c1
428 nmdc:mga07m45_63244_c1
429 nmdc:mga05p37_23993_c1
430 nmdc:mga05p37_2525_c2
431 nmdc:mga05p37_3418_c1
432 nmdc:mga05p37_387078_c1
433 nmdc:mga05p37_418095_c1
434 nmdc:mga05p37_70027_c1
435 nmdc:mga05p37_92035_c1
436 nmdc:mga09592_128310_c1
437 nmdc:mga09592_185285_c1
438 nmdc:mga09592_216938_c1
439 nmdc:mga09592_339395_c1
440 nmdc:mga09592_5875_c1
441 nmdc:mga0qj67_132988_c1
442 nmdc:mga0qj67_2012_c1
443 nmdc:mga0qj67_42648_c1
444 nmdc:mga06r32_27297_c1
445 nmdc:mga06r32_3477_c1
446 nmdc:mga06r32_75885_c1
447 nmdc:mga06r32_79288_c1
448 nmdc:mga06r32_9653_c1
449 nmdc:mga08y16_16472_c1
450 nmdc:mga08y16_17001_c1
451 nmdc:mga0n895_149860_c1
452 nmdc:mga0n895_641_c1
453 nmdc:mga0n895_96808_c1
454 nmdc:mga0rr50_100246_c1
455 nmdc:mga08x19_302_c1
456 nmdc:mga08x19_51340_c1
457 nmdc:mga0a205_16902_c1
458 nmdc:mga0a205_40782_c1
459 nmdc:mga0a205_60978_c1
460 Ga0500646_0010017
461 Ga0501084_0012760
462 Ga0501084_0024042
463 Ga0501084_0032877
464 Ga0590071_000202
465 Ga0590071_012584
466 Ga0590074_000176
467 Ga0590075_000136
468 Ga0590077_001376
469 Ga0587073_0003885
470 Ga0501082_0002258
471 Ga0501082_0095235
472 Ga0530510_0022137

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03916

NrfD

Polysulphide reductase, NrfD

69

400

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
6loe-assembly1.cif.gz_C cryo-em structure of the dithionite-reduced photosynthetic alternative complex iii from roseiflexus castenholzii 0.8288 16 402
6btm-assembly1.cif.gz_C structure of alternative complex iii from flavobacterium johnsoniae (wild type) 0.8282 17 402
6f0k-assembly1.cif.gz_C alternative complex iii 0.828 18 399
6loe-assembly1.cif.gz_C cryo-em structure of the dithionite-reduced photosynthetic alternative complex iii from roseiflexus castenholzii 0.7579 16 402
6btm-assembly1.cif.gz_C structure of alternative complex iii from flavobacterium johnsoniae (wild type) 0.7552 17 402
ID Description Score Start End Superfamily
af_P37180_41_337_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.6825 67 379 1.20.1630.10
af_P37180_41_337_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.6506 67 379 1.20.1630.10
af_P76173_1_274_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.6089 65 375 1.20.1630.10
af_P76173_1_274_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.5885 65 375 1.20.1630.10
af_G5ECH4_2_140_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.5368 96 232 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A3B8WBV6-F1-model_v4 Hydrogenase 0.9917 253 373 GO:0016020
AF-A0A3B8WBV6-F1-model_v4 Hydrogenase 0.9678 253 373 GO:0016020
AF-A0A382YI40-F1-model_v4 Hydrogenase 0.9239 165 372 GO:0005886
AF-A0A382YI40-F1-model_v4 Hydrogenase 0.9031 165 372 GO:0005886
AF-A6N3K6-F1-model_v4 Polysulfide reductase subunit C 0.8865 66 369 GO:0005886

Map