F348905

General Info

Members Datasets Scaffolds Average Seq Length
236 153 472 314

Family's Representative Sequence

Representative Sequence 3300005546|Ga0070696_100202655|Ga0070696_1002026552
Length 362
Sequence LTRDIILFAVAVKVQQLEKYSLHERIEIAKAKHIAMSSPLEATSKSKTAIYAAIAGNLAIAVTKFAAAAFTGSSAMLSEAIHSVVDTGNGLLMLLGVRKSRRPPDSDHPFGHGHELYFWTLIVGVLIFAVGGGMSVYEGIMHILHPTLPENPVWSYSVLAVATVFEGTTWLLGWKAFNLERGRKGVLETIHDTKDPTSFTVLLEDSAALLGLVFAFLGIFFGSQLQMPSLDGVASVLIGLLLCGVAVLMVYESKGLLIGEGLDRQELASIHALVQADPAVERVRHLHTMYLGPHEVLLTIELRFHSDITALEVRRAVRRLQEVIQTRHPDVRRIFFGAESLGEEGDISLGHGGFRTAKGERD

Samples

Sample ID Description Type Environment
1 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
78 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
117 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
118 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
119 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
125 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
126 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
129 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
130 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
131 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
132 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
137 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
152 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
153 2515154123 Trinickia symbiotica JPY347 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.58
Metatranscriptomes 0
Isolates 0.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.85
Nodule 0.42
Rhizoplane 2.12
Rhizosphere 94.49
Stem 0
Stem Tuber 0
Unclassified 16.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070696_100202655 3300005546 Bacteria 1482
2 SwRhRL2b_contig_2637643 2162886007 Bacteria 2117
3 rootL2_10278654 3300003322 Unclassified 1617
4 Ga0065714_10023654 3300005288 Bacteria 1754
5 Ga0065704_10004088 3300005289 Bacteria 4104
6 Ga0065712_10020885 3300005290 Bacteria 2856
7 Ga0065715_10018771 3300005293 Bacteria 2745
8 Ga0065715_10089590 3300005293 Bacteria 9335
9 Ga0065715_10196852 3300005293 Bacteria 1383
10 Ga0065707_10013801 3300005295 Bacteria 1744
11 Ga0065707_10115571 3300005295 Bacteria 2263
12 Ga0070658_10001978 3300005327 Bacteria 17221
13 Ga0070658_10074558 3300005327 Bacteria 2783
14 Ga0070683_100000521 3300005329 Bacteria 26974
15 Ga0070690_100058613 3300005330 Bacteria 2473
16 Ga0070690_100176480 3300005330 Bacteria 1474
17 Ga0070670_100001346 3300005331 Bacteria 19660
18 Ga0070670_100046269 3300005331 Bacteria 3741
19 Ga0070680_100108547 3300005336 Bacteria 2309
20 Ga0070682_100018265 3300005337 Bacteria 4096
21 Ga0070687_100012260 3300005343 Bacteria 3779
22 Ga0070675_100193777 3300005354 Unclassified 1762
23 Ga0070659_100015973 3300005366 Bacteria 5630
24 Ga0070703_10039223 3300005406 Bacteria 1467
25 Ga0070714_100002625 3300005435 Bacteria 13239
26 Ga0070713_100090092 3300005436 Bacteria 2636
27 Ga0070701_10014140 3300005438 Bacteria 3652
28 Ga0070711_100103205 3300005439 Bacteria 2078
29 Ga0070705_100039389 3300005440 Unclassified 2681
30 Ga0070700_100000022 3300005441 Bacteria 130126
31 Ga0070700_100101448 3300005441 Bacteria 1896
32 Ga0070694_100090518 3300005444 Bacteria 2146
33 Ga0070681_10002362 3300005458 Bacteria 17226
34 Ga0070681_10244937 3300005458 Bacteria 1706
35 Ga0070681_10372648 3300005458 Bacteria 1338
36 Ga0070681_10515526 3300005458 Unclassified 1109
37 Ga0068867_100283160 3300005459 Bacteria 1360
38 Ga0070706_100180975 3300005467 Bacteria 1968
39 Ga0070699_100001195 3300005518 Bacteria 23963
40 Ga0070699_100089047 3300005518 Unclassified 2696
41 Ga0070699_100089302 3300005518 Unclassified 2692
42 Ga0070699_100179142 3300005518 Bacteria 1880
43 Ga0070679_100172502 3300005530 Bacteria 2136
44 Ga0070679_100361523 3300005530 Bacteria 1399
45 Ga0070697_100000211 3300005536 Bacteria 47665
46 Ga0068853_100092949 3300005539 Bacteria 2654
47 Ga0068853_100191507 3300005539 Bacteria 1858
48 Ga0070695_100040105 3300005545 Unclassified 2963
49 Ga0070695_100131057 3300005545 Unclassified 1728
50 Ga0070695_100151055 3300005545 Bacteria 1621
51 Ga0070696_100023147 3300005546 Bacteria 4222
52 Ga0070696_100125836 3300005546 Unclassified 1859
53 Ga0070693_100042545 3300005547 Bacteria 2560
54 Ga0070704_100097327 3300005549 Bacteria 2208
55 Ga0068855_100254784 3300005563 Bacteria 1957
56 Ga0070664_100129660 3300005564 Bacteria 2214
57 Ga0070664_100227806 3300005564 Unclassified 1670
58 Ga0068857_100058447 3300005577 Bacteria 3424
59 Ga0068857_100078658 3300005577 Unclassified 2943
60 Ga0068857_100229806 3300005577 Bacteria 1696
61 Ga0068854_100124689 3300005578 Bacteria 1960
62 Ga0070702_100078037 3300005615 Bacteria 1976
63 Ga0068859_100018183 3300005617 Bacteria 7065
64 Ga0068859_100057074 3300005617 Bacteria 3933
65 Ga0068859_100114384 3300005617 Bacteria 2762
66 Ga0068864_100041440 3300005618 Unclassified 3938
67 Ga0068864_100116441 3300005618 Bacteria 2385
68 Ga0068864_100266064 3300005618 Bacteria 1596
69 Ga0068864_100275159 3300005618 Unclassified 1570
70 Ga0068861_100003606 3300005719 Bacteria 10312
71 Ga0068861_100036519 3300005719 Bacteria 3647
72 Ga0068863_100047271 3300005841 Bacteria 4083
73 Ga0068863_100121323 3300005841 Bacteria 2493
74 Ga0068863_100167578 3300005841 Bacteria 2107
75 Ga0068858_100138011 3300005842 Unclassified 2289
76 Ga0068858_100143364 3300005842 Bacteria 2243
77 Ga0068858_100167854 3300005842 Bacteria 2068
78 Ga0068858_100214209 3300005842 Bacteria 1823
79 Ga0068860_100110218 3300005843 Bacteria 2631
80 Ga0068860_100154887 3300005843 Bacteria 2208
81 Ga0081539_10000980 3300005985 Bacteria 53183
82 Ga0081539_10004088 3300005985 Bacteria 16676
83 Ga0075432_10052265 3300006058 Bacteria 1443
84 Ga0097621_100133823 3300006237 Bacteria 2112
85 Ga0097621_100357453 3300006237 Unclassified 1300
86 Ga0068871_100023108 3300006358 Bacteria 4802
87 Ga0068871_100063463 3300006358 Bacteria 3021
88 Ga0075433_10035185 3300006852 Unclassified 4305
89 Ga0075434_100081726 3300006871 Bacteria 3228
90 Ga0075434_100252907 3300006871 Bacteria 1781
91 Ga0075434_100426886 3300006871 Bacteria 1347
92 Ga0075436_100001367 3300006914 Bacteria 16612
93 Ga0075436_100082790 3300006914 Bacteria 2226
94 Ga0097620_100018180 3300006931 Bacteria 7065
95 Ga0097620_100057074 3300006931 Bacteria 3933
96 Ga0097620_100114371 3300006931 Bacteria 2762
97 Ga0105240_10002745 3300009093 Bacteria 27852
98 Ga0105240_10169578 3300009093 Bacteria 2586
99 Ga0111539_10000228 3300009094 Bacteria 67465
100 Ga0105245_10351042 3300009098 Unclassified 1462
101 Ga0105247_10002005 3300009101 Bacteria 14105
102 Ga0114129_10087866 3300009147 Unclassified 4310
103 Ga0114129_10175011 3300009147 Bacteria 2923
104 Ga0114129_10364962 3300009147 Unclassified 1910
105 Ga0105243_10037687 3300009148 Bacteria 3760
106 Ga0105243_10208405 3300009148 Bacteria 1719
107 Ga0105243_10298029 3300009148 Bacteria 1460
108 Ga0105243_10410476 3300009148 Bacteria 1260
109 Ga0105241_10026690 3300009174 Bacteria 4298
110 Ga0105241_10030457 3300009174 Bacteria 4033
111 Ga0105241_10052611 3300009174 Bacteria 3110
112 Ga0105242_10040984 3300009176 Bacteria 3733
113 Ga0105248_10002373 3300009177 Bacteria 20917
114 Ga0105248_10036682 3300009177 Bacteria 5483
115 Ga0105248_10106497 3300009177 Bacteria 3161
116 Ga0105248_10285108 3300009177 Bacteria 1859
117 Ga0105248_10476042 3300009177 Bacteria 1408
118 Ga0105237_10065821 3300009545 Bacteria 3619
119 Ga0105238_10070478 3300009551 Unclassified 3495
120 Ga0105238_10080038 3300009551 Bacteria 3257
121 Ga0105249_10029767 3300009553 Bacteria 4933
122 Ga0105239_10327501 3300010375 Bacteria 1728
123 Ga0105239_10467024 3300010375 Unclassified 1433
124 Ga0105239_10520735 3300010375 Bacteria 1353
125 Ga0105246_10163250 3300011119 Bacteria 1699
126 Ga0157373_10073627 3300013100 Bacteria 2410
127 Ga0157373_10152920 3300013100 Unclassified 1623
128 Ga0157370_10001952 3300013104 Bacteria 25404
129 Ga0157378_10362097 3300013297 Bacteria 1419
130 Ga0163162_10045584 3300013306 Bacteria 4393
131 Ga0157372_10006880 3300013307 Bacteria 12100
132 Ga0157372_10043342 3300013307 Bacteria 4981
133 Ga0157375_10368906 3300013308 Bacteria 1602
134 Ga0163163_10000062 3300014325 Bacteria 119109
135 Ga0163163_10295788 3300014325 Bacteria 1671
136 Ga0157380_10218190 3300014326 Bacteria 1705
137 Ga0213876_10023062 3300021384 Bacteria 3288
138 Ga0207692_10087606 3300025898 Bacteria 1680
139 Ga0207710_10000595 3300025900 Bacteria 21248
140 Ga0207647_10034264 3300025904 Bacteria 3243
141 Ga0207647_10067509 3300025904 Unclassified 2167
142 Ga0207705_10045069 3300025909 Bacteria 3170
143 Ga0207705_10093168 3300025909 Bacteria 2208
144 Ga0207705_10130761 3300025909 Bacteria 1868
145 Ga0207654_10035603 3300025911 Bacteria 2775
146 Ga0207654_10048382 3300025911 Bacteria 2433
147 Ga0207654_10109779 3300025911 Bacteria 1714
148 Ga0207707_10023513 3300025912 Bacteria 5389
149 Ga0207707_10456526 3300025912 Bacteria 1093
150 Ga0207695_10060014 3300025913 Bacteria 3940
151 Ga0207663_10248752 3300025916 Bacteria 1307
152 Ga0207662_10089145 3300025918 Bacteria 1895
153 Ga0207662_10160765 3300025918 Bacteria 1435
154 Ga0207652_10132911 3300025921 Bacteria 2220
155 Ga0207694_10049166 3300025924 Unclassified 3264
156 Ga0207650_10000006 3300025925 Bacteria 544730
157 Ga0207687_10268907 3300025927 Bacteria 1362
158 Ga0207700_10424438 3300025928 Bacteria 1168
159 Ga0207664_10001247 3300025929 Bacteria 16824
160 Ga0207664_10069584 3300025929 Bacteria 2830
161 Ga0207690_10018348 3300025932 Bacteria 4290
162 Ga0207709_10003190 3300025935 Bacteria 9853
163 Ga0207709_10008457 3300025935 Bacteria 5693
164 Ga0207665_10179436 3300025939 Bacteria 1533
165 Ga0207711_10003692 3300025941 Bacteria 13203
166 Ga0207711_10101181 3300025941 Bacteria 2550
167 Ga0207711_10335200 3300025941 Bacteria 1399
168 Ga0207711_10385565 3300025941 Archaea 1301
169 Ga0207689_10412122 3300025942 Bacteria 1127
170 Ga0207661_10000719 3300025944 Bacteria 21519
171 Ga0207679_10533037 3300025945 Unclassified 1051
172 Ga0207667_10309406 3300025949 Bacteria 1614
173 Ga0207712_10062539 3300025961 Bacteria 2646
174 Ga0207703_10130400 3300026035 Bacteria 2170
175 Ga0207703_10132399 3300026035 Bacteria 2155
176 Ga0207703_10157628 3300026035 Unclassified 1985
177 Ga0207639_10105896 3300026041 Bacteria 2282
178 Ga0207639_10204364 3300026041 Bacteria 1696
179 Ga0207708_10000040 3300026075 Bacteria 130242
180 Ga0207708_10029442 3300026075 Bacteria 4162
181 Ga0207708_10055707 3300026075 Bacteria 3015
182 Ga0207708_10162596 3300026075 Bacteria 1763
183 Ga0207641_10036237 3300026088 Bacteria 4117
184 Ga0207648_10423728 3300026089 Bacteria 1209
185 Ga0207676_10167517 3300026095 Bacteria 1911
186 Ga0207674_10039580 3300026116 Bacteria 4886
187 Ga0207674_10061328 3300026116 Unclassified 3800
188 Ga0207675_100043397 3300026118 Unclassified 4199
189 Ga0207675_100412928 3300026118 Bacteria 1332
190 Ga0210002_1016659 3300027617 Unclassified 1164
191 Ga0209971_1002083 3300027682 Bacteria 4871
192 Ga0209974_10000690 3300027876 Bacteria 11489
193 Ga0207428_10004287 3300027907 Bacteria 13642
194 Ga0268264_10212075 3300028381 Bacteria 1778
195 Ga0307515_10091264 3300028794 Bacteria 3808
196 Ga0307513_10051637 3300031456 Bacteria 4434
197 Ga0307413_10135647 3300031824 Bacteria 1692
198 Ga0373951_0018015 3300035091 Unclassified 1602
199 Ga0373925_0092711 3300037068 Bacteria 2311
200 Ga0395899_0000661 3300037312 Bacteria 35137
201 Ga0395900_0295724 3300037418 Bacteria 1607
202 Ga0395898_0079711 3300037466 Bacteria 3159
203 Ga0395901_0274386 3300038443 Unclassified 1753
204 Ga0242420_000597 3300038996 Bacteria 4210
205 Ga0436363_0424261 3300039450 Bacteria 2096
206 Ga0450889_004232 3300042144 Unclassified 1419
207 Ga0451576_0617154 3300045051 Unclassified 1140
208 Ga0495632_0008891 3300046519 Bacteria 6104
209 Ga0495642_0055922 3300046528 Bacteria 1629
210 Ga0495621_0016693 3300046539 Unclassified 2360
211 Ga0495661_0009870 3300046665 Bacteria 6530
212 Ga0495687_019589 3300047443 Bacteria 3315
213 Ga0496106_0158535 3300048909 Bacteria 1789
214 Ga0496107_0159410 3300048910 Bacteria 1672
215 Ga0496108_0136118 3300048911 Bacteria 2114
216 Ga0496110_0326400 3300048913 Unclassified 1398
217 Ga0496111_0309039 3300048914 Bacteria 1172
218 Ga0501034_0089242 3300049571 Bacteria 3081
219 Ga0501034_0144177 3300049571 Unclassified 2360
220 Ga0501038_0090479 3300049574 Bacteria 2565
221 Ga0501043_0089599 3300049579 Bacteria 2418
222 Ga0501047_0232504 3300049581 Bacteria 1696
223 Ga0501067_0096441 3300049583 Unclassified 1642
224 Ga0501070_0069249 3300049586 Bacteria 2921
225 Ga0501070_0087197 3300049586 Bacteria 2584
226 Ga0501035_0112776 3300049822 Bacteria 2382
227 Ga0501044_0464281 3300049823 Bacteria 1171
228 nmdc:mga05p37_118021_c1 3300050507 Unclassified 3260
229 nmdc:mga08y16_7264_c1 3300050511 Bacteria 11630
230 nmdc:mga0n895_370945_c1 3300050512 Bacteria 1449
231 nmdc:mga08x19_1126_c1 3300050514 Bacteria 16648
232 nmdc:mga08x19_144331_c1 3300050514 Bacteria 1609
233 nmdc:mga0a205_92125_c1 3300050515 Bacteria 2929
234 Ga0500583_0083836 3300053092 Unclassified 1543
235 Ga0500622_0007488 3300053156 Bacteria 6197
236 2515692246 2515154123 Bacteria 6387382
237 Ga0070696_100202655
238 SwRhRL2b_contig_2637643
239 rootL2_10278654
240 Ga0065714_10023654
241 Ga0065704_10004088
242 Ga0065712_10020885
243 Ga0065715_10018771
244 Ga0065715_10089590
245 Ga0065715_10196852
246 Ga0065707_10013801
247 Ga0065707_10115571
248 Ga0070658_10001978
249 Ga0070658_10074558
250 Ga0070683_100000521
251 Ga0070690_100058613
252 Ga0070690_100176480
253 Ga0070670_100001346
254 Ga0070670_100046269
255 Ga0070680_100108547
256 Ga0070682_100018265
257 Ga0070687_100012260
258 Ga0070675_100193777
259 Ga0070659_100015973
260 Ga0070703_10039223
261 Ga0070714_100002625
262 Ga0070713_100090092
263 Ga0070701_10014140
264 Ga0070711_100103205
265 Ga0070705_100039389
266 Ga0070700_100000022
267 Ga0070700_100101448
268 Ga0070694_100090518
269 Ga0070681_10002362
270 Ga0070681_10244937
271 Ga0070681_10372648
272 Ga0070681_10515526
273 Ga0068867_100283160
274 Ga0070706_100180975
275 Ga0070699_100001195
276 Ga0070699_100089047
277 Ga0070699_100089302
278 Ga0070699_100179142
279 Ga0070679_100172502
280 Ga0070679_100361523
281 Ga0070697_100000211
282 Ga0068853_100092949
283 Ga0068853_100191507
284 Ga0070695_100040105
285 Ga0070695_100131057
286 Ga0070695_100151055
287 Ga0070696_100023147
288 Ga0070696_100125836
289 Ga0070693_100042545
290 Ga0070704_100097327
291 Ga0068855_100254784
292 Ga0070664_100129660
293 Ga0070664_100227806
294 Ga0068857_100058447
295 Ga0068857_100078658
296 Ga0068857_100229806
297 Ga0068854_100124689
298 Ga0070702_100078037
299 Ga0068859_100018183
300 Ga0068859_100057074
301 Ga0068859_100114384
302 Ga0068864_100041440
303 Ga0068864_100116441
304 Ga0068864_100266064
305 Ga0068864_100275159
306 Ga0068861_100003606
307 Ga0068861_100036519
308 Ga0068863_100047271
309 Ga0068863_100121323
310 Ga0068863_100167578
311 Ga0068858_100138011
312 Ga0068858_100143364
313 Ga0068858_100167854
314 Ga0068858_100214209
315 Ga0068860_100110218
316 Ga0068860_100154887
317 Ga0081539_10000980
318 Ga0081539_10004088
319 Ga0075432_10052265
320 Ga0097621_100133823
321 Ga0097621_100357453
322 Ga0068871_100023108
323 Ga0068871_100063463
324 Ga0075433_10035185
325 Ga0075434_100081726
326 Ga0075434_100252907
327 Ga0075434_100426886
328 Ga0075436_100001367
329 Ga0075436_100082790
330 Ga0097620_100018180
331 Ga0097620_100057074
332 Ga0097620_100114371
333 Ga0105240_10002745
334 Ga0105240_10169578
335 Ga0111539_10000228
336 Ga0105245_10351042
337 Ga0105247_10002005
338 Ga0114129_10087866
339 Ga0114129_10175011
340 Ga0114129_10364962
341 Ga0105243_10037687
342 Ga0105243_10208405
343 Ga0105243_10298029
344 Ga0105243_10410476
345 Ga0105241_10026690
346 Ga0105241_10030457
347 Ga0105241_10052611
348 Ga0105242_10040984
349 Ga0105248_10002373
350 Ga0105248_10036682
351 Ga0105248_10106497
352 Ga0105248_10285108
353 Ga0105248_10476042
354 Ga0105237_10065821
355 Ga0105238_10070478
356 Ga0105238_10080038
357 Ga0105249_10029767
358 Ga0105239_10327501
359 Ga0105239_10467024
360 Ga0105239_10520735
361 Ga0105246_10163250
362 Ga0157373_10073627
363 Ga0157373_10152920
364 Ga0157370_10001952
365 Ga0157378_10362097
366 Ga0163162_10045584
367 Ga0157372_10006880
368 Ga0157372_10043342
369 Ga0157375_10368906
370 Ga0163163_10000062
371 Ga0163163_10295788
372 Ga0157380_10218190
373 Ga0213876_10023062
374 Ga0207692_10087606
375 Ga0207710_10000595
376 Ga0207647_10034264
377 Ga0207647_10067509
378 Ga0207705_10045069
379 Ga0207705_10093168
380 Ga0207705_10130761
381 Ga0207654_10035603
382 Ga0207654_10048382
383 Ga0207654_10109779
384 Ga0207707_10023513
385 Ga0207707_10456526
386 Ga0207695_10060014
387 Ga0207663_10248752
388 Ga0207662_10089145
389 Ga0207662_10160765
390 Ga0207652_10132911
391 Ga0207694_10049166
392 Ga0207650_10000006
393 Ga0207687_10268907
394 Ga0207700_10424438
395 Ga0207664_10001247
396 Ga0207664_10069584
397 Ga0207690_10018348
398 Ga0207709_10003190
399 Ga0207709_10008457
400 Ga0207665_10179436
401 Ga0207711_10003692
402 Ga0207711_10101181
403 Ga0207711_10335200
404 Ga0207711_10385565
405 Ga0207689_10412122
406 Ga0207661_10000719
407 Ga0207679_10533037
408 Ga0207667_10309406
409 Ga0207712_10062539
410 Ga0207703_10130400
411 Ga0207703_10132399
412 Ga0207703_10157628
413 Ga0207639_10105896
414 Ga0207639_10204364
415 Ga0207708_10000040
416 Ga0207708_10029442
417 Ga0207708_10055707
418 Ga0207708_10162596
419 Ga0207641_10036237
420 Ga0207648_10423728
421 Ga0207676_10167517
422 Ga0207674_10039580
423 Ga0207674_10061328
424 Ga0207675_100043397
425 Ga0207675_100412928
426 Ga0210002_1016659
427 Ga0209971_1002083
428 Ga0209974_10000690
429 Ga0207428_10004287
430 Ga0268264_10212075
431 Ga0307515_10091264
432 Ga0307513_10051637
433 Ga0307413_10135647
434 Ga0373951_0018015
435 Ga0373925_0092711
436 Ga0395899_0000661
437 Ga0395900_0295724
438 Ga0395898_0079711
439 Ga0395901_0274386
440 Ga0242420_000597
441 Ga0436363_0424261
442 Ga0450889_004232
443 Ga0451576_0617154
444 Ga0495632_0008891
445 Ga0495642_0055922
446 Ga0495621_0016693
447 Ga0495661_0009870
448 Ga0495687_019589
449 Ga0496106_0158535
450 Ga0496107_0159410
451 Ga0496108_0136118
452 Ga0496110_0326400
453 Ga0496111_0309039
454 Ga0501034_0089242
455 Ga0501034_0144177
456 Ga0501038_0090479
457 Ga0501043_0089599
458 Ga0501047_0232504
459 Ga0501067_0096441
460 Ga0501070_0069249
461 Ga0501070_0087197
462 Ga0501035_0112776
463 Ga0501044_0464281
464 nmdc:mga05p37_118021_c1
465 nmdc:mga08y16_7264_c1
466 nmdc:mga0n895_370945_c1
467 nmdc:mga08x19_1126_c1
468 nmdc:mga08x19_144331_c1
469 nmdc:mga0a205_92125_c1
470 Ga0500583_0083836
471 Ga0500622_0007488
472 2515692246

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01545

Cation_efflux

Cation efflux family

50

258

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zzt-assembly1.cif.gz_A-2 crystal structure of the cytosolic domain of the cation diffusion facilitator family protein 0.8939 228 301
5hsp-assembly1.cif.gz_A-2 mamm ctd m250l 0.8668 228 302
6han-assembly2.cif.gz_B mamm ctd h264e-e289h 0.8417 228 305
3w63-assembly1.cif.gz_A-2 mamm-ctd 215-293 0.8411 228 304
6gp6-assembly1.cif.gz_A mamm ctd - copper form 0.8372 227 305
ID Description Score Start End Superfamily
af_Q3V5J4_162_375_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.9172 16 217 1.20.1510.10
af_D3ZWW5_236_448_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.9165 16 215 1.20.1510.10
af_Q9SI03_23_218_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.9041 13 220 1.20.1510.10
af_Q10LJ2_305_379_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.9005 228 301 3.30.70.1350
af_Q9SI03_23_218_1.20.1510.10 Mainly Alpha;Up-down Bundle;Alpha-lytic protease prodomain-like;Cation efflux protein transmembrane domain 0.8785 13 220 1.20.1510.10
ID Description Score Start End GO Terms
AF-A0A7U1HVX1-F1-model_v4 deleted 0.9413 234 303
AF-A0A843JLK0-F1-model_v4 Cation diffusion facilitator family transporter 0.9293 14 304 GO:0006829
GO:0008324
GO:0016020
AF-C7N3D2-F1-model_v4 Cation diffusion facilitator family transporter 0.9274 1 304 GO:0006829
GO:0008324
GO:0016020
AF-A0A1H8S6D4-F1-model_v4 Cation diffusion facilitator family transporter 0.9273 1 304 GO:0006829
GO:0008324
GO:0016020
AF-A0A3D5CD84-F1-model_v4 Cation transporter 0.9258 85 268 GO:0006829
GO:0008324
GO:0016020

Map