F348247

General Info

Members Datasets Scaffolds Average Seq Length
235 173 231 174

Family's Representative Sequence

Representative Sequence 3300028381|Ga0268264_10910653|Ga0268264_109106531
Length 202
Sequence MIKYQPSGKINFALLTLNLFPDLNIHQMRKIILSLAVSLDGFIEGPNGEYDWCFTDQDYGMSDFFKRIDSVFMGRKSYELAQSMGDAAMPGFPKLKEYVFSNTLQTVKKDVIVISGNIVEQVNKIRNEPGRDIWLFGGAALTTSMMNLGLVDEIWLAVHPILLGSGKYCFSHLDHRVHLDLVETKPYSTGLVSLTYTVVHNQ

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
4 2738543023 Pedobacter sp. OK628 Isolate Unclassified
5 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
6 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
7 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
13 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
16 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
17 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
18 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
19 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
20 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
21 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
22 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
23 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
24 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
25 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
26 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
30 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
31 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
32 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
33 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
34 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
35 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
36 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
37 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
47 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
100 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
102 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
107 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
110 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
111 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
112 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
113 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
120 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
121 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
122 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
123 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
124 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
125 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
126 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
127 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
130 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
131 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
132 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
135 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
138 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
139 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
140 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
141 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
142 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
148 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
149 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
150 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
151 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
152 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
153 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
154 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
155 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
156 3300049771 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_B_4_control Metagenome Rhizosphere
157 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
158 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
159 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
160 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
163 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
164 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
165 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
166 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
167 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
168 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
169 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
171 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
172 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
173 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.87
Metatranscriptomes 0.43
Isolates 1.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.36
Nodule 0
Rhizoplane 1.7
Rhizosphere 80.43
Stem 0
Stem Tuber 0
Unclassified 8.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1567641 2162886007 Bacteria 114185
2 SwRhRL2b_contig_2942017 2162886007 Bacteria 1236
3 SwRhRL2b_contig_676118 2162886007 Bacteria 147446
4 MBSR1b_contig_795359 2162886012 Bacteria 997
5 JGI25158J39367_1011891 3300002739 Bacteria 1153
6 rootH1_10037176 3300003316 Bacteria 6451
7 rootH1_10108694 3300003316 Unclassified 1366
8 rootH2_10184735 3300003320 Unclassified 1476
9 rootH2_10184985 3300003320 Bacteria 4613
10 rootH2_10186938 3300003320 Bacteria 2473
11 rootH2_10252069 3300003320 Bacteria 1377
12 rootL2_10142269 3300003322 Bacteria 5907
13 rootL2_10346340 3300003322 Bacteria 1322
14 rootL2_10350049 3300003322 Bacteria 1052
15 rootH1_10025354 3300003323 Bacteria 3692
16 rootH1_10164354 3300003323 Bacteria 3737
17 rootH1_10208800 3300003323 Unclassified 3270
18 Ga0055536_1000036 3300003781 Bacteria 141730
19 Ga0055530_10000851 3300003791 Bacteria 25181
20 Ga0055531_10000066 3300003794 Bacteria 115693
21 Ga0055531_10000128 3300003794 Bacteria 85521
22 Ga0065714_10078062 3300005288 Bacteria 2633
23 Ga0065704_10070136 3300005289 Bacteria 560402
24 Ga0065704_10092042 3300005289 Bacteria 2651
25 Ga0065704_10186642 3300005289 Unclassified 1210
26 Ga0065704_10384833 3300005289 Bacteria 769
27 Ga0065715_10328624 3300005293 Bacteria 988
28 Ga0065707_10304655 3300005295 Bacteria 997
29 Ga0070658_10757515 3300005327 Unclassified 843
30 Ga0070676_10170120 3300005328 Bacteria 1409
31 Ga0070690_100503797 3300005330 Bacteria 906
32 Ga0070670_100133715 3300005331 Unclassified 2143
33 Ga0070670_100360506 3300005331 Bacteria 1278
34 Ga0070670_100452276 3300005331 Unclassified 1138
35 Ga0068869_100021412 3300005334 Bacteria 4448
36 Ga0070680_100001415 3300005336 Bacteria 17343
37 Ga0070680_100747193 3300005336 Bacteria 842
38 Ga0070660_100022871 3300005339 Bacteria 4628
39 Ga0070689_100288045 3300005340 Bacteria 1364
40 Ga0070668_100024075 3300005347 Unclassified 4611
41 Ga0070675_100007506 3300005354 Bacteria 8429
42 Ga0070673_100169674 3300005364 Bacteria 1861
43 Ga0070673_100643205 3300005364 Unclassified 970
44 Ga0070688_100020099 3300005365 Bacteria 3878
45 Ga0070688_100204281 3300005365 Unclassified 1384
46 Ga0070667_100454660 3300005367 Bacteria 1170
47 Ga0070709_10740981 3300005434 Bacteria 767
48 Ga0070700_100037439 3300005441 Bacteria 2950
49 Ga0070694_100585239 3300005444 Bacteria 897
50 Ga0070662_100019415 3300005457 Bacteria 4614
51 Ga0070681_10080925 3300005458 Bacteria 3204
52 Ga0068867_100499898 3300005459 Bacteria 1045
53 Ga0070679_100006325 3300005530 Bacteria 11025
54 Ga0070679_100401317 3300005530 Bacteria 1317
55 Ga0070684_100045625 3300005535 Bacteria 3795
56 Ga0070684_100458978 3300005535 Bacteria 1178
57 Ga0070672_100383933 3300005543 Bacteria 1202
58 Ga0070686_100111936 3300005544 Bacteria 1861
59 Ga0070686_100488566 3300005544 Bacteria 953
60 Ga0070665_100957866 3300005548 Bacteria 868
61 Ga0070665_101358155 3300005548 Unclassified 720
62 Ga0068855_100133820 3300005563 Bacteria 2829
63 Ga0068859_100174042 3300005617 Bacteria 2234
64 Ga0068859_100930302 3300005617 Bacteria 953
65 Ga0068864_100071624 3300005618 Unclassified 3019
66 Ga0068861_100025664 3300005719 Bacteria 4276
67 Ga0068870_10094678 3300005840 Bacteria 1677
68 Ga0068863_100626027 3300005841 Unclassified 1066
69 Ga0068863_101415377 3300005841 Bacteria 703
70 Ga0068862_100142054 3300005844 Bacteria 2132
71 Ga0070716_100041944 3300006173 Bacteria 2552
72 Ga0075366_10308324 3300006195 Bacteria 969
73 Ga0097621_100780810 3300006237 Unclassified 884
74 Ga0068871_100237854 3300006358 Bacteria 1582
75 Ga0068871_100306714 3300006358 Unclassified 1395
76 Ga0068865_101348009 3300006881 Bacteria 636
77 Ga0097620_100174044 3300006931 Bacteria 2234
78 Ga0097620_100930206 3300006931 Bacteria 953
79 Ga0105240_10000071 3300009093 Bacteria 204197
80 Ga0105240_10001541 3300009093 Bacteria 39132
81 Ga0105240_11834111 3300009093 Bacteria 632
82 Ga0105247_10819095 3300009101 Unclassified 712
83 Ga0105241_10203953 3300009174 Bacteria 1653
84 Ga0105241_10283679 3300009174 Bacteria 1415
85 Ga0105237_10005058 3300009545 Bacteria 14986
86 Ga0105237_10014233 3300009545 Bacteria 8329
87 Ga0105238_10187933 3300009551 Bacteria 2042
88 Ga0105249_10006720 3300009553 Bacteria 10016
89 Ga0105239_10000662 3300010375 Bacteria 49050
90 Ga0157371_10040466 3300013102 Bacteria 3328
91 Ga0157371_10051177 3300013102 Bacteria 2935
92 Ga0157370_10178086 3300013104 Unclassified 1976
93 Ga0157370_10247155 3300013104 Bacteria 1650
94 Ga0157370_10275899 3300013104 Bacteria 1553
95 Ga0157370_10462613 3300013104 Bacteria 1166
96 Ga0157369_10074132 3300013105 Bacteria 3650
97 Ga0157369_10587958 3300013105 Unclassified 1150
98 Ga0157374_10310354 3300013296 Bacteria 1561
99 Ga0163162_10989314 3300013306 Unclassified 951
100 Ga0157372_10058251 3300013307 Bacteria 4318
101 Ga0157372_10121250 3300013307 Bacteria 3003
102 Ga0157372_10288165 3300013307 Bacteria 1909
103 Ga0157372_10735249 3300013307 Bacteria 1147
104 Ga0157380_10124666 3300014326 Bacteria 2187
105 Ga0157380_11009517 3300014326 Unclassified 866
106 Ga0157377_10903274 3300014745 Bacteria 660
107 Ga0157376_10111950 3300014969 Bacteria 2404
108 Ga0209676_1000008 3300025292 Bacteria 991778
109 Ga0209050_1000180 3300025298 Bacteria 142987
110 Ga0209257_1000005 3300025304 Bacteria 1592528
111 Ga0209257_1000025 3300025304 Bacteria 724838
112 Ga0207697_10025052 3300025315 Unclassified 2440
113 Ga0207645_10785255 3300025907 Bacteria 647
114 Ga0207643_10413640 3300025908 Bacteria 854
115 Ga0207695_10003159 3300025913 Bacteria 23494
116 Ga0207671_10036244 3300025914 Bacteria 3658
117 Ga0207657_10014423 3300025919 Bacteria 7719
118 Ga0207657_10221647 3300025919 Bacteria 1515
119 Ga0207652_10000168 3300025921 Bacteria 71181
120 Ga0207652_10356649 3300025921 Bacteria 1320
121 Ga0207652_11080444 3300025921 Unclassified 703
122 Ga0207681_10036329 3300025923 Bacteria 3250
123 Ga0207694_10292646 3300025924 Bacteria 1339
124 Ga0207650_10394951 3300025925 Bacteria 1144
125 Ga0207659_10118838 3300025926 Unclassified 2022
126 Ga0207690_10795725 3300025932 Bacteria 781
127 Ga0207706_10050569 3300025933 Bacteria 3672
128 Ga0207689_10055779 3300025942 Bacteria 3251
129 Ga0207667_10689991 3300025949 Bacteria 1024
130 Ga0207712_10167494 3300025961 Bacteria 1714
131 Ga0207668_10299082 3300025972 Bacteria 1327
132 Ga0207668_11155380 3300025972 Bacteria 695
133 Ga0207708_10189605 3300026075 Bacteria 1636
134 Ga0207641_10334075 3300026088 Unclassified 1440
135 Ga0207648_10322442 3300026089 Bacteria 1388
136 Ga0207676_10099115 3300026095 Unclassified 2411
137 Ga0207674_10017212 3300026116 Bacteria 7886
138 Ga0207674_10257492 3300026116 Unclassified 1692
139 Ga0207675_100016538 3300026118 Bacteria 6888
140 Ga0268264_10910653 3300028381 Bacteria 883
141 Ga0307515_10000007 3300028794 Bacteria 719669
142 Ga0265760_10005466 3300031090 Bacteria 3641
143 Ga0265327_10000026 3300031251 Bacteria 379288
144 Ga0307509_10020778 3300031507 Bacteria 7446
145 Ga0307408_100447295 3300031548 Unclassified 1120
146 Ga0307514_10369060 3300031649 Bacteria 753
147 Ga0307405_10024780 3300031731 Unclassified 3434
148 Ga0307405_10335019 3300031731 Bacteria 1161
149 Ga0307407_10091657 3300031903 Unclassified 1864
150 Ga0307409_100005651 3300031995 Bacteria 7240
151 Ga0307416_100008473 3300032002 Bacteria 6640
152 Ga0307416_100068788 3300032002 Bacteria 2927
153 Ga0307416_101228771 3300032002 Bacteria 855
154 Ga0307415_100019366 3300032126 Bacteria 4131
155 Ga0316212_1039499 3300033547 Unclassified 666
156 Ga0373927_0010682 3300035695 Bacteria 6117
157 Ga0373937_1475890 3300036401 Bacteria 628
158 Ga0316582_0492494 3300036647 Bacteria 845
159 Ga0395899_0000806 3300037312 Bacteria 30625
160 Ga0395899_0006304 3300037312 Bacteria 9178
161 Ga0395899_0011015 3300037312 Bacteria 6926
162 Ga0395900_0001707 3300037418 Bacteria 25467
163 Ga0395900_0021120 3300037418 Bacteria 6654
164 Ga0395900_0062550 3300037418 Bacteria 3826
165 Ga0395898_0000688 3300037466 Bacteria 60735
166 Ga0395898_0144456 3300037466 Bacteria 2277
167 Ga0395898_0324710 3300037466 Bacteria 1468
168 Ga0395905_0101294 3300037471 Bacteria 2704
169 Ga0395901_0001896 3300038443 Bacteria 21588
170 Ga0395901_0013137 3300038443 Bacteria 8406
171 Ga0451791_0207179 3300041451 Unclassified 657
172 Ga0451802_1671588 3300041460 Bacteria 773
173 Ga0451837_1173622 3300041494 Unclassified 585
174 Ga0439431_0040395 3300041997 Unclassified 1186
175 Ga0439431_0135687 3300041997 Unclassified 693
176 Ga0439433_0090885 3300041999 Bacteria 750
177 Ga0439445_0021731 3300042004 Unclassified 1614
178 Ga0439462_0037892 3300042015 Unclassified 1285
179 Ga0450898_000916 3300042134 Bacteria 3700
180 Ga0439434_0004892 3300042435 Bacteria 3919
181 Ga0451577_0033640 3300042876 Bacteria 4622
182 Ga0453683_0000679 3300044673 Bacteria 36072
183 Ga0466961_0007137 3300044693 Bacteria 7108
184 Ga0466963_0419050 3300044694 Bacteria 944
185 Ga0453684_0005662 3300044712 Bacteria 24532
186 Ga0453684_0042651 3300044712 Bacteria 6114
187 Ga0451576_0006538 3300045051 Bacteria 14266
188 Ga0495638_0370210 3300046460 Bacteria 751
189 Ga0495605_0036869 3300046474 Bacteria 2463
190 Ga0495606_0002426 3300046507 Bacteria 21733
191 Ga0495608_0414137 3300046511 Bacteria 823
192 Ga0495630_0323069 3300046517 Bacteria 1180
193 Ga0495625_0000923 3300046660 Bacteria 39492
194 Ga0495661_0003703 3300046665 Bacteria 11229
195 Ga0495661_0014166 3300046665 Bacteria 5342
196 Ga0495672_0020042 3300047320 Bacteria 4393
197 Ga0495680_0661667 3300047322 Bacteria 693
198 Ga0495686_0007422 3300047472 Bacteria 8223
199 Ga0495686_0067023 3300047472 Unclassified 2217
200 Ga0496112_0470663 3300048915 Bacteria 1194
201 Ga0496115_1140537 3300048918 Bacteria 589
202 Ga0496116_0004698 3300048919 Bacteria 12905
203 Ga0501290_027795 3300049513 Unclassified 799
204 Ga0501199_010374 3300049650 Unclassified 995
205 Ga0501202_006062 3300049652 Bacteria 2153
206 Ga0501223_013151 3300049663 Unclassified 1649
207 Ga0501227_131092 3300049665 Bacteria 682
208 Ga0501235_008370 3300049669 Bacteria 2257
209 Ga0501225_0005475 3300049705 Unclassified 3727
210 Ga0501083_0000173 3300049744 Bacteria 41690
211 Ga0501268_010588 3300049765 Unclassified 1439
212 Ga0501274_006407 3300049771 Unclassified 1014
213 Ga0501274_018370 3300049771 Unclassified 708
214 Ga0501276_011539 3300049773 Unclassified 755
215 Ga0501279_004812 3300049775 Unclassified 1774
216 Ga0501212_004785 3300049851 Unclassified 1764
217 nmdc:mga09592_847507_c1 3300050508 Bacteria 771
218 nmdc:mga08y16_417973_c1 3300050511 Bacteria 1371
219 Ga0500578_0445368 3300053086 Bacteria 738
220 Ga0500646_0196353 3300053090 Bacteria 690
221 Ga0500651_0000934 3300053093 Bacteria 14333
222 Ga0500556_0020297 3300053104 Bacteria 2125
223 Ga0500594_0002787 3300053118 Unclassified 3806
224 Ga0500658_0066329 3300053134 Bacteria 1514
225 Ga0500561_0078669 3300053137 Bacteria 957
226 Ga0500568_0237023 3300053139 Bacteria 665
227 Ga0500616_0014019 3300053153 Unclassified 4622
228 Ga0500616_0031264 3300053153 Bacteria 2917
229 Ga0500633_0000800 3300053160 Bacteria 5378
230 Ga0500587_007931 3300053739 Bacteria 1372
231 Ga0530510_0534367 3300061734 Bacteria 890

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300003320 rootH2_10252069 rootH2_102520691 146
2 3300049669 Ga0501235_008370 Ga0501235_008370_617_1096 158
3 iso_pu_bacteria 2896109856 2896114962 160
4 3300031090 Ga0265760_10005466 Ga0265760_100054661 161
5 3300005617 Ga0068859_100930302 Ga0068859_1009303022 163
6 3300005618 Ga0068864_100071624 Ga0068864_1000716243 163
7 3300005841 Ga0068863_100626027 Ga0068863_1006260273 163
8 3300005841 Ga0068863_101415377 Ga0068863_1014153771 163
9 3300006173 Ga0070716_100041944 Ga0070716_1000419443 163
10 3300006237 Ga0097621_100780810 Ga0097621_1007808103 163
11 3300006358 Ga0068871_100306714 Ga0068871_1003067142 163
12 3300006931 Ga0097620_100930206 Ga0097620_1009302062 163
13 3300026088 Ga0207641_10334075 Ga0207641_103340753 163
14 3300026095 Ga0207676_10099115 Ga0207676_100991153 163
15 3300031507 Ga0307509_10020778 Ga0307509_100207786 163
16 3300035695 Ga0373927_0010682 Ga0373927_0010682_5209_5709 163
17 3300036401 Ga0373937_1475890 Ga0373937_1475890_13_513 163
18 3300046511 Ga0495608_0414137 Ga0495608_0414137_26_526 163
19 3300046517 Ga0495630_0323069 Ga0495630_0323069_399_908 163
20 3300047322 Ga0495680_0661667 Ga0495680_0661667_170_670 163
21 3300003320 rootH2_10186938 rootH2_101869383 165
22 3300037312 Ga0395899_0006304 Ga0395899_0006304_29_550 165
23 3300037418 Ga0395900_0001707 Ga0395900_0001707_14859_15437 165
24 3300037466 Ga0395898_0000688 Ga0395898_0000688_14811_15389 165
25 3300038443 Ga0395901_0013137 Ga0395901_0013137_6312_6890 165
26 3300003794 Ga0055531_10000128 Ga0055531_1000012855 166
27 3300025304 Ga0209257_1000005 Ga0209257_1000005823 166
28 3300036647 Ga0316582_0492494 Ga0316582_0492494_306_821 166
29 3300053086 Ga0500578_0445368 Ga0500578_0445368_11_520 166
30 3300003316 rootH1_10108694 rootH1_101086941 167
31 3300003323 rootH1_10025354 rootH1_100253543 167
32 3300005331 Ga0070670_100452276 Ga0070670_1004522762 167
33 3300005434 Ga0070709_10740981 Ga0070709_107409811 167
34 3300013104 Ga0157370_10275899 Ga0157370_102758992 167
35 3300014326 Ga0157380_11009517 Ga0157380_110095172 167
36 3300041494 Ga0451837_1173622 Ga0451837_1173622_18_524 167
37 3300044694 Ga0466963_0419050 Ga0466963_0419050_147_659 167
38 3300049744 Ga0501083_0000173 Ga0501083_0000173_23608_24120 167
39 3300053153 Ga0500616_0014019 Ga0500616_0014019_1191_1733 167
40 3300053739 Ga0500587_007931 Ga0500587_007931_817_1323 167
41 3300005444 Ga0070694_100585239 Ga0070694_1005852391 168
42 3300005544 Ga0070686_100488566 Ga0070686_1004885661 168
43 3300005548 Ga0070665_100957866 Ga0070665_1009578662 168
44 3300044712 Ga0453684_0042651 Ga0453684_0042651_1515_2024 168
45 3300003322 rootL2_10346340 rootL2_103463401 169
46 3300005458 Ga0070681_10080925 Ga0070681_100809252 169
47 3300005544 Ga0070686_100111936 Ga0070686_1001119362 169
48 3300009093 Ga0105240_10001541 Ga0105240_1000154120 169
49 3300009101 Ga0105247_10819095 Ga0105247_108190951 169
50 3300009545 Ga0105237_10005058 Ga0105237_100050584 169
51 3300013105 Ga0157369_10587958 Ga0157369_105879582 169
52 3300025913 Ga0207695_10003159 Ga0207695_1000315923 169
53 3300025914 Ga0207671_10036244 Ga0207671_100362443 169
54 3300025921 Ga0207652_11080444 Ga0207652_110804441 169
55 3300026116 Ga0207674_10257492 Ga0207674_102574923 169
56 3300031251 Ga0265327_10000026 Ga0265327_1000002626 169
57 3300031731 Ga0307405_10335019 Ga0307405_103350191 169
58 3300042876 Ga0451577_0033640 Ga0451577_0033640_1301_1828 169
59 3300044673 Ga0453683_0000679 Ga0453683_0000679_30853_31368 169
60 3300044693 Ga0466961_0007137 Ga0466961_0007137_2155_2667 169
61 3300044712 Ga0453684_0005662 Ga0453684_0005662_1593_2114 169
62 3300045051 Ga0451576_0006538 Ga0451576_0006538_4383_4898 169
63 3300046474 Ga0495605_0036869 Ga0495605_0036869_1158_1688 169
64 3300046665 Ga0495661_0003703 Ga0495661_0003703_565_1107 169
65 3300046665 Ga0495661_0014166 Ga0495661_0014166_3534_4064 169
66 iso_pu_bacteria 2721755487 2722730353 169
67 3300028794 Ga0307515_10000007 Ga0307515_1000000743 170
68 3300031649 Ga0307514_10369060 Ga0307514_103690602 170
69 3300033547 Ga0316212_1039499 Ga0316212_10394991 170
70 3300053139 Ga0500568_0237023 Ga0500568_0237023_35_637 170
71 3300053153 Ga0500616_0031264 Ga0500616_0031264_1220_1735 170
72 3300003323 rootH1_10208800 rootH1_102088005 171
73 3300006358 Ga0068871_100237854 Ga0068871_1002378542 171
74 3300009545 Ga0105237_10014233 Ga0105237_100142334 171
75 3300009551 Ga0105238_10187933 Ga0105238_101879332 171
76 3300010375 Ga0105239_10000662 Ga0105239_100006623 171
77 3300025924 Ga0207694_10292646 Ga0207694_102926462 171
78 3300025972 Ga0207668_11155380 Ga0207668_111553801 171
79 3300031548 Ga0307408_100447295 Ga0307408_1004472953 171
80 3300031731 Ga0307405_10024780 Ga0307405_100247804 171
81 3300031903 Ga0307407_10091657 Ga0307407_100916572 171
82 3300032002 Ga0307416_100068788 Ga0307416_1000687882 171
83 3300032002 Ga0307416_101228771 Ga0307416_1012287711 171
84 3300046460 Ga0495638_0370210 Ga0495638_0370210_60_602 171
85 3300048918 Ga0496115_1140537 Ga0496115_1140537_33_554 171
86 3300049513 Ga0501290_027795 Ga0501290_027795_74_592 171
87 3300049650 Ga0501199_010374 Ga0501199_010374_455_973 171
88 3300049652 Ga0501202_006062 Ga0501202_006062_1553_2071 171
89 3300049663 Ga0501223_013151 Ga0501223_013151_1035_1553 171
90 3300049705 Ga0501225_0005475 Ga0501225_0005475_1650_2168 171
91 3300049765 Ga0501268_010588 Ga0501268_010588_483_1001 171
92 3300049771 Ga0501274_006407 Ga0501274_006407_371_889 171
93 3300049773 Ga0501276_011539 Ga0501276_011539_134_652 171
94 3300049775 Ga0501279_004812 Ga0501279_004812_220_738 171
95 3300049851 Ga0501212_004785 Ga0501212_004785_891_1409 171
96 3300053090 Ga0500646_0196353 Ga0500646_0196353_81_623 171
97 3300053104 Ga0500556_0020297 Ga0500556_0020297_1160_1702 171
98 3300053134 Ga0500658_0066329 Ga0500658_0066329_330_872 171
99 3300061734 Ga0530510_0534367 Ga0530510_0534367_45_614 171
100 2162886007 SwRhRL2b_contig_2942017 SwRhRL2b_0667.00005890 172
101 3300002739 JGI25158J39367_1011891 JGI25158J39367_10118912 172
102 3300003316 rootH1_10037176 rootH1_100371768 172
103 3300003320 rootH2_10184985 rootH2_101849855 172
104 3300003322 rootL2_10142269 rootL2_101422697 172
105 3300003322 rootL2_10350049 rootL2_103500492 172
106 3300005289 Ga0065704_10092042 Ga0065704_100920422 172
107 3300005331 Ga0070670_100360506 Ga0070670_1003605062 172
108 3300005364 Ga0070673_100643205 Ga0070673_1006432051 172
109 3300005365 Ga0070688_100204281 Ga0070688_1002042812 172
110 3300013307 Ga0157372_10735249 Ga0157372_107352491 172
111 3300014969 Ga0157376_10111950 Ga0157376_101119502 172
112 3300025925 Ga0207650_10394951 Ga0207650_103949512 172
113 3300031995 Ga0307409_100005651 Ga0307409_1000056513 172
114 3300032002 Ga0307416_100008473 Ga0307416_1000084737 172
115 3300032126 Ga0307415_100019366 Ga0307415_1000193662 172
116 3300041451 Ga0451791_0207179 Ga0451791_0207179_121_639 172
117 3300041997 Ga0439431_0135687 Ga0439431_0135687_141_659 172
118 3300046507 Ga0495606_0002426 Ga0495606_0002426_524_1042 172
119 3300049665 Ga0501227_131092 Ga0501227_131092_112_630 172
120 3300049771 Ga0501274_018370 Ga0501274_018370_172_690 172
121 2162886012 MBSR1b_contig_795359 MBSR1b_0251.00001850 173
122 3300003320 rootH2_10184735 rootH2_101847352 173
123 3300003323 rootH1_10164354 rootH1_101643544 173
124 3300005293 Ga0065715_10328624 Ga0065715_103286241 173
125 3300005295 Ga0065707_10304655 Ga0065707_103046551 173
126 3300005327 Ga0070658_10757515 Ga0070658_107575151 173
127 3300005328 Ga0070676_10170120 Ga0070676_101701202 173
128 3300005330 Ga0070690_100503797 Ga0070690_1005037972 173
129 3300005331 Ga0070670_100133715 Ga0070670_1001337152 173
130 3300005334 Ga0068869_100021412 Ga0068869_1000214122 173
131 3300005336 Ga0070680_100747193 Ga0070680_1007471931 173
132 3300005339 Ga0070660_100022871 Ga0070660_1000228714 173
133 3300005340 Ga0070689_100288045 Ga0070689_1002880452 173
134 3300005347 Ga0070668_100024075 Ga0070668_1000240752 173
135 3300005354 Ga0070675_100007506 Ga0070675_1000075065 173
136 3300005364 Ga0070673_100169674 Ga0070673_1001696742 173
137 3300005365 Ga0070688_100020099 Ga0070688_1000200991 173
138 3300005441 Ga0070700_100037439 Ga0070700_1000374393 173
139 3300005457 Ga0070662_100019415 Ga0070662_1000194155 173
140 3300005459 Ga0068867_100499898 Ga0068867_1004998982 173
141 3300005530 Ga0070679_100006325 Ga0070679_1000063252 173
142 3300005530 Ga0070679_100401317 Ga0070679_1004013173 173
143 3300005535 Ga0070684_100045625 Ga0070684_1000456251 173
144 3300005543 Ga0070672_100383933 Ga0070672_1003839331 173
145 3300005548 Ga0070665_101358155 Ga0070665_1013581551 173
146 3300005563 Ga0068855_100133820 Ga0068855_1001338204 173
147 3300005617 Ga0068859_100174042 Ga0068859_1001740422 173
148 3300005719 Ga0068861_100025664 Ga0068861_1000256644 173
149 3300005840 Ga0068870_10094678 Ga0068870_100946782 173
150 3300005844 Ga0068862_100142054 Ga0068862_1001420542 173
151 3300006195 Ga0075366_10308324 Ga0075366_103083242 173
152 3300006881 Ga0068865_101348009 Ga0068865_1013480091 173
153 3300006931 Ga0097620_100174044 Ga0097620_1001740442 173
154 3300009093 Ga0105240_11834111 Ga0105240_118341112 173
155 3300009553 Ga0105249_10006720 Ga0105249_100067208 173
156 3300013102 Ga0157371_10040466 Ga0157371_100404661 173
157 3300013102 Ga0157371_10051177 Ga0157371_100511774 173
158 3300013104 Ga0157370_10178086 Ga0157370_101780862 173
159 3300013105 Ga0157369_10074132 Ga0157369_100741324 173
160 3300013296 Ga0157374_10310354 Ga0157374_103103542 173
161 3300013306 Ga0163162_10989314 Ga0163162_109893141 173
162 3300013307 Ga0157372_10058251 Ga0157372_100582513 173
163 3300013307 Ga0157372_10121250 Ga0157372_101212503 173
164 3300013307 Ga0157372_10288165 Ga0157372_102881652 173
165 3300014326 Ga0157380_10124666 Ga0157380_101246662 173
166 3300014745 Ga0157377_10903274 Ga0157377_109032741 173
167 3300025315 Ga0207697_10025052 Ga0207697_100250522 173
168 3300025907 Ga0207645_10785255 Ga0207645_107852551 173
169 3300025908 Ga0207643_10413640 Ga0207643_104136401 173
170 3300025919 Ga0207657_10014423 Ga0207657_100144231 173
171 3300025921 Ga0207652_10000168 Ga0207652_1000016879 173
172 3300025921 Ga0207652_10356649 Ga0207652_103566492 173
173 3300025923 Ga0207681_10036329 Ga0207681_100363292 173
174 3300025926 Ga0207659_10118838 Ga0207659_101188382 173
175 3300025932 Ga0207690_10795725 Ga0207690_107957251 173
176 3300025933 Ga0207706_10050569 Ga0207706_100505692 173
177 3300025942 Ga0207689_10055779 Ga0207689_100557792 173
178 3300025949 Ga0207667_10689991 Ga0207667_106899911 173
179 3300025961 Ga0207712_10167494 Ga0207712_101674942 173
180 3300025972 Ga0207668_10299082 Ga0207668_102990822 173
181 3300026075 Ga0207708_10189605 Ga0207708_101896052 173
182 3300026089 Ga0207648_10322442 Ga0207648_103224422 173
183 3300026116 Ga0207674_10017212 Ga0207674_100172127 173
184 3300026118 Ga0207675_100016538 Ga0207675_1000165383 173
185 3300028381 Ga0268264_10910653 Ga0268264_109106531 173
186 3300037312 Ga0395899_0000806 Ga0395899_0000806_27959_28483 173
187 3300037312 Ga0395899_0011015 Ga0395899_0011015_5763_6284 173
188 3300037418 Ga0395900_0021120 Ga0395900_0021120_3619_4140 173
189 3300037418 Ga0395900_0062550 Ga0395900_0062550_1854_2378 173
190 3300037466 Ga0395898_0144456 Ga0395898_0144456_1327_1851 173
191 3300037466 Ga0395898_0324710 Ga0395898_0324710_661_1182 173
192 3300037471 Ga0395905_0101294 Ga0395905_0101294_183_707 173
193 3300038443 Ga0395901_0001896 Ga0395901_0001896_1064_1588 173
194 3300041997 Ga0439431_0040395 Ga0439431_0040395_305_829 173
195 3300041999 Ga0439433_0090885 Ga0439433_0090885_105_629 173
196 3300042004 Ga0439445_0021731 Ga0439445_0021731_427_951 173
197 3300042015 Ga0439462_0037892 Ga0439462_0037892_85_609 173
198 3300042134 Ga0450898_000916 Ga0450898_000916_954_1478 173
199 3300042435 Ga0439434_0004892 Ga0439434_0004892_2228_2752 173
200 3300047320 Ga0495672_0020042 Ga0495672_0020042_2420_2941 173
201 3300047472 Ga0495686_0007422 Ga0495686_0007422_5698_6231 173
202 3300047472 Ga0495686_0067023 Ga0495686_0067023_677_1213 173
203 3300048919 Ga0496116_0004698 Ga0496116_0004698_1364_1915 173
204 3300050511 nmdc:mga08y16_417973_c1 nmdc:mga08y16_417973_c1_166_693 173
205 iso_pu_bacteria 2738543023 2739300353 173
206 iso_pu_bacteria 2775506987 2776612649 173
207 3300005288 Ga0065714_10078062 Ga0065714_100780621 174
208 3300005535 Ga0070684_100458978 Ga0070684_1004589782 174
209 3300009174 Ga0105241_10203953 Ga0105241_102039532 174
210 3300048915 Ga0496112_0470663 Ga0496112_0470663_622_1170 174
211 3300009093 Ga0105240_10000071 Ga0105240_1000007113 175
212 3300041460 Ga0451802_1671588 Ga0451802_1671588_40_570 175
213 3300050508 nmdc:mga09592_847507_c1 nmdc:mga09592_847507_c1_96_653 175
214 3300053118 Ga0500594_0002787 Ga0500594_0002787_702_1232 175
215 3300003781 Ga0055536_1000036 Ga0055536_1000036121 176
216 3300003791 Ga0055530_10000851 Ga0055530_100008516 176
217 3300003794 Ga0055531_10000066 Ga0055531_1000006636 176
218 3300009174 Ga0105241_10283679 Ga0105241_102836792 176
219 3300013104 Ga0157370_10462613 Ga0157370_104626131 176
220 3300025292 Ga0209676_1000008 Ga0209676_1000008117 176
221 3300025298 Ga0209050_1000180 Ga0209050_1000180116 176
222 3300025304 Ga0209257_1000025 Ga0209257_1000025633 176
223 3300005289 Ga0065704_10186642 Ga0065704_101866421 177
224 3300005289 Ga0065704_10384833 Ga0065704_103848332 177
225 3300005336 Ga0070680_100001415 Ga0070680_1000014155 177
226 3300005367 Ga0070667_100454660 Ga0070667_1004546602 177
227 3300013104 Ga0157370_10247155 Ga0157370_102471553 177
228 3300025919 Ga0207657_10221647 Ga0207657_102216472 177
229 3300046660 Ga0495625_0000923 Ga0495625_0000923_25545_26087 177
230 3300053093 Ga0500651_0000934 Ga0500651_0000934_11852_12388 177
231 3300053137 Ga0500561_0078669 Ga0500561_0078669_390_938 177
232 3300053160 Ga0500633_0000800 Ga0500633_0000800_430_978 177
233 2162886007 SwRhRL2b_contig_1567641 SwRhRL2b_0328.00008980 178
234 2162886007 SwRhRL2b_contig_676118 SwRhRL2b_0354.00010430 178
235 3300005289 Ga0065704_10070136 Ga0065704_10070136254 178

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

29

193

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gd9-assembly1.cif.gz_B crystal structure of a putative dihydrofolate reductase (bsu40760, yyap) from bacillus subtilis at 2.30 a resolution 0.8779 2 175
3jtw-assembly2.cif.gz_B-3 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8578 1 175
3jtw-assembly1.cif.gz_A-2 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8566 1 175
3jtw-assembly2.cif.gz_B-3 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.845 1 175
3jtw-assembly1.cif.gz_A-2 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.8431 1 175
ID Description Score Start End Superfamily
2gd9B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8784 2 174 3.40.430.10
2gd9B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8731 2 174 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.851 1 175 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8369 1 175 3.40.430.10
1cz3B00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8342 3 178 3.40.430.10
ID Description Score Start End GO Terms
AF-A0A2T7BJZ7-F1-model_v4 Dihydrofolate reductase 0.9718 1 178 GO:0008703
GO:0009231
AF-A0A537ID20-F1-model_v4 Dihydrofolate reductase 0.9578 1 178 GO:0008703
GO:0009231
AF-A0A2T7BJZ7-F1-model_v4 Dihydrofolate reductase 0.9558 1 178 GO:0008703
GO:0009231
AF-A0A3S0E3V0-F1-model_v4 Dihydrofolate reductase 0.9526 1 178 GO:0008703
GO:0009231
AF-A0A3S0E3V0-F1-model_v4 Dihydrofolate reductase 0.9472 1 178 GO:0008703
GO:0009231

Feature Viewer

pLDDT pTM Quality
92.08 0.88 High
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Predicted Structure (AlphaFold2)

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