F348243

General Info

Members Datasets Scaffolds Average Seq Length
235 165 470 205

Family's Representative Sequence

Representative Sequence 3300027907|Ga0207428_10060055|Ga0207428_100600552
Length 254
Sequence MPRGLVGGPAAGAAPNESGLRIAAPARIGILLSGRGSNFLALHAAVERGELPAKIAVVASDVPEAPGIARAAELGLPTVCLPRRDFADRAAHEEAILAALAAHGVAWVCLAGFMRLLSSAFLRAFPQRVLNIHPSLLPAFPGLHPQRQALEHGVKLSGCTVHFVDEGVDSGPIVVQRAVPVLDGDDEAALAARILVEEHGAYAEALRRLLAEPWRVEGRRVVFGAASRGGASCNEDQRAATAEPAASPVQALRR

Samples

Sample ID Description Type Environment
1 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
66 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
67 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
68 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
69 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
70 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
103 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
104 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
105 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
106 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
107 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
108 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
109 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
117 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
118 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
119 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
120 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
123 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
128 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
129 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
143 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
150 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
158 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
163 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
164 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
165 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.28
Nodule 0
Rhizoplane 1.28
Rhizosphere 94.47
Stem 0
Stem Tuber 0
Unclassified 8.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207428_10060055 3300027907 Bacteria 3012
2 JGI25160J50197_1013278 3300003354 Bacteria 2817
3 Ga0070690_100015732 3300005330 Bacteria 4519
4 Ga0068869_100003338 3300005334 Bacteria 9806
5 Ga0070680_100560609 3300005336 Unclassified 979
6 Ga0070682_100913431 3300005337 Bacteria 722
7 Ga0068868_100174903 3300005338 Bacteria 1779
8 Ga0070660_100041471 3300005339 Bacteria 3509
9 Ga0070689_100132528 3300005340 Bacteria 1999
10 Ga0070661_100050134 3300005344 Bacteria 3055
11 Ga0070669_100167585 3300005353 Bacteria 1711
12 Ga0070675_100057235 3300005354 Bacteria 3213
13 Ga0070674_100284152 3300005356 Bacteria 1313
14 Ga0070673_100016426 3300005364 Bacteria 5234
15 Ga0070673_100364616 3300005364 Bacteria 1285
16 Ga0070659_100060515 3300005366 Bacteria 2991
17 Ga0070659_100217857 3300005366 Bacteria 1575
18 Ga0070709_10189979 3300005434 Bacteria 1448
19 Ga0070714_100010005 3300005435 Bacteria 7480
20 Ga0070714_100628986 3300005435 Bacteria 1032
21 Ga0070701_10052953 3300005438 Bacteria 2111
22 Ga0070705_100137693 3300005440 Bacteria 1602
23 Ga0070700_100003422 3300005441 Bacteria 8175
24 Ga0070708_100151076 3300005445 Bacteria 2160
25 Ga0070678_100063284 3300005456 Bacteria 2736
26 Ga0070681_10276080 3300005458 Unclassified 1592
27 Ga0070681_10300560 3300005458 Bacteria 1515
28 Ga0068867_100027351 3300005459 Bacteria 4097
29 Ga0070679_100058411 3300005530 Bacteria 3843
30 Ga0070679_100343440 3300005530 Bacteria 1441
31 Ga0070679_100452510 3300005530 Bacteria 1229
32 Ga0070684_100001189 3300005535 Bacteria 18707
33 Ga0070684_100673115 3300005535 Bacteria 964
34 Ga0068853_100014052 3300005539 Bacteria 6552
35 Ga0070672_100020537 3300005543 Bacteria 4819
36 Ga0070665_100126538 3300005548 Bacteria 2557
37 Ga0068855_100190466 3300005563 Bacteria 2314
38 Ga0068857_101146890 3300005577 Bacteria 751
39 Ga0068856_100303106 3300005614 Bacteria 1615
40 Ga0068856_100306394 3300005614 Bacteria 1606
41 Ga0070702_100266785 3300005615 Bacteria 1169
42 Ga0070702_100300116 3300005615 Bacteria 1111
43 Ga0068852_100201191 3300005616 Bacteria 1885
44 Ga0068859_100930470 3300005617 Bacteria 953
45 Ga0068866_10531533 3300005718 Unclassified 783
46 Ga0068861_100054318 3300005719 Bacteria 3051
47 Ga0068861_100094436 3300005719 Bacteria 2367
48 Ga0068870_10004930 3300005840 Bacteria 5781
49 Ga0068858_100051617 3300005842 Bacteria 3805
50 Ga0068860_100036834 3300005843 Bacteria 4685
51 Ga0081455_10025677 3300005937 Bacteria 5433
52 Ga0070717_10121818 3300006028 Unclassified 2235
53 Ga0070717_10892619 3300006028 Bacteria 809
54 Ga0097621_100122510 3300006237 Bacteria 2207
55 Ga0075428_100008825 3300006844 Bacteria 11185
56 Ga0075428_100065680 3300006844 Bacteria 3973
57 Ga0075428_101136191 3300006844 Bacteria 824
58 Ga0075430_100033558 3300006846 Bacteria 4356
59 Ga0075430_100044395 3300006846 Bacteria 3759
60 Ga0075431_100089490 3300006847 Bacteria 3177
61 Ga0075431_100108806 3300006847 Bacteria 2860
62 Ga0075431_100269038 3300006847 Bacteria 1728
63 Ga0075433_10007307 3300006852 Bacteria 8764
64 Ga0075433_10032341 3300006852 Bacteria 4481
65 Ga0075433_10061704 3300006852 Bacteria 3284
66 Ga0075434_100004152 3300006871 Bacteria 12974
67 Ga0075434_100014042 3300006871 Bacteria 7646
68 Ga0075434_100048927 3300006871 Bacteria 4196
69 Ga0075429_100065550 3300006880 Bacteria 3162
70 Ga0097620_100930511 3300006931 Bacteria 953
71 Ga0075435_100010740 3300007076 Bacteria 6706
72 Ga0075435_100166835 3300007076 Bacteria 1857
73 Ga0111539_10033529 3300009094 Bacteria 6234
74 Ga0111539_10089338 3300009094 Bacteria 3620
75 Ga0111539_10136409 3300009094 Bacteria 2873
76 Ga0111539_10682701 3300009094 Bacteria 1195
77 Ga0114129_10054093 3300009147 Bacteria 5629
78 Ga0114129_10092637 3300009147 Bacteria 4186
79 Ga0105243_10031234 3300009148 Bacteria 4105
80 Ga0105241_10134986 3300009174 Bacteria 2002
81 Ga0105238_10000010 3300009551 Bacteria 271274
82 Ga0105238_10229853 3300009551 Unclassified 1832
83 Ga0157370_10098853 3300013104 Bacteria 2735
84 Ga0157370_10292936 3300013104 Bacteria 1503
85 Ga0157370_10433568 3300013104 Unclassified 1209
86 Ga0157370_10561825 3300013104 Bacteria 1046
87 Ga0157369_10004638 3300013105 Bacteria 16148
88 Ga0157369_10201872 3300013105 Unclassified 2087
89 Ga0157374_10000008 3300013296 Bacteria 588863
90 Ga0157374_10001458 3300013296 Bacteria 20000
91 Ga0157374_10014343 3300013296 Bacteria 6935
92 Ga0157378_10007412 3300013297 Bacteria 9584
93 Ga0157372_10053279 3300013307 Bacteria 4509
94 Ga0157375_10037895 3300013308 Bacteria 4625
95 Ga0157377_10000007 3300014745 Bacteria 402005
96 Ga0157376_10442722 3300014969 Bacteria 1266
97 Ga0213873_10002389 3300021358 Unclassified 3246
98 Ga0213875_10001971 3300021388 Bacteria 12690
99 Ga0213875_10032097 3300021388 Bacteria 2483
100 Ga0213871_10030330 3300021441 Bacteria 1406
101 Ga0209130_1002090 3300025284 Bacteria 10730
102 Ga0207426_1000304 3300025302 Bacteria 96312
103 Ga0207699_10172494 3300025906 Bacteria 1448
104 Ga0207643_10033123 3300025908 Bacteria 2891
105 Ga0207707_10104496 3300025912 Bacteria 2475
106 Ga0207707_10427668 3300025912 Bacteria 1135
107 Ga0207695_10023445 3300025913 Bacteria 6973
108 Ga0207695_10693245 3300025913 Bacteria 899
109 Ga0207662_10025592 3300025918 Bacteria 3399
110 Ga0207657_10023075 3300025919 Bacteria 5803
111 Ga0207649_10032633 3300025920 Bacteria 3106
112 Ga0207681_10010994 3300025923 Bacteria 5560
113 Ga0207694_10000002 3300025924 Bacteria 1165763
114 Ga0207694_10000003 3300025924 Bacteria 1165533
115 Ga0207659_10033175 3300025926 Bacteria 3551
116 Ga0207664_10114866 3300025929 Bacteria 2244
117 Ga0207664_10856291 3300025929 Bacteria 817
118 Ga0207690_10074188 3300025932 Bacteria 2356
119 Ga0207690_10257130 3300025932 Bacteria 1351
120 Ga0207709_10016706 3300025935 Bacteria 4085
121 Ga0207670_10170280 3300025936 Bacteria 1632
122 Ga0207691_10067338 3300025940 Bacteria 3238
123 Ga0207689_10006903 3300025942 Bacteria 9987
124 Ga0207689_10278345 3300025942 Bacteria 1385
125 Ga0207661_10000002 3300025944 Bacteria 816104
126 Ga0207661_10174366 3300025944 Bacteria 1874
127 Ga0207667_10151822 3300025949 Bacteria 2384
128 Ga0207651_10010252 3300025960 Bacteria 5183
129 Ga0207651_10086374 3300025960 Bacteria 2280
130 Ga0207640_10021793 3300025981 Bacteria 3824
131 Ga0207640_10041306 3300025981 Bacteria 2933
132 Ga0207639_10067444 3300026041 Bacteria 2784
133 Ga0207702_10217722 3300026078 Unclassified 1778
134 Ga0207702_10375719 3300026078 Bacteria 1366
135 Ga0207702_10479944 3300026078 Bacteria 1210
136 Ga0207648_10001829 3300026089 Bacteria 23265
137 Ga0207674_10560179 3300026116 Bacteria 1104
138 Ga0207674_10638950 3300026116 Bacteria 1028
139 Ga0207675_100060587 3300026118 Bacteria 3533
140 Ga0207675_100088404 3300026118 Bacteria 2910
141 Ga0207683_10206366 3300026121 Bacteria 1787
142 Ga0209995_1020087 3300027471 Bacteria 1104
143 Ga0209974_10027531 3300027876 Bacteria 1881
144 Ga0207428_10000324 3300027907 Bacteria 61960
145 Ga0207428_10103204 3300027907 Bacteria 2201
146 Ga0268265_10424052 3300028380 Bacteria 1236
147 Ga0268264_10026203 3300028381 Bacteria 4762
148 Ga0316575_10210590 3300031665 Bacteria 810
149 Ga0307405_10113331 3300031731 Bacteria 1841
150 Ga0307412_11178243 3300031911 Unclassified 685
151 Ga0373928_0045496 3300035084 Bacteria 1022
152 Ga0373936_0122942 3300035113 Unclassified 1110
153 Ga0373943_0098068 3300035170 Bacteria 1528
154 Ga0373946_0002728 3300035171 Bacteria 6241
155 Ga0373955_0062669 3300035172 Unclassified 2057
156 Ga0373961_0000862 3300035241 Bacteria 10208
157 Ga0373935_0001509 3300035692 Bacteria 12934
158 Ga0373935_0085004 3300035692 Bacteria 2062
159 Ga0395900_0296602 3300037418 Bacteria 1604
160 Ga0395898_0291812 3300037466 Bacteria 1556
161 Ga0436364_0248845 3300037853 Bacteria 3864
162 Ga0436364_0282738 3300037853 Bacteria 17231
163 Ga0436365_0970387 3300039437 Bacteria 322356
164 Ga0436365_1473599 3300039437 Bacteria 2039
165 Ga0436365_1628423 3300039437 Bacteria 3149
166 Ga0436360_0222243 3300039438 Bacteria 17184
167 Ga0436361_0754359 3300039447 Bacteria 78520
168 Ga0436361_0843689 3300039447 Bacteria 3274
169 Ga0436362_0117558 3300039453 Bacteria 6661
170 Ga0439447_067472 3300041407 Bacteria 835
171 Ga0439433_0009947 3300041999 Bacteria 2076
172 Ga0439446_0001344 3300042156 Bacteria 5544
173 Ga0439434_0008285 3300042435 Bacteria 3048
174 Ga0451577_0191669 3300042876 Bacteria 1844
175 Ga0451577_0980713 3300042876 Bacteria 759
176 Ga0453683_0000327 3300044673 Bacteria 58419
177 Ga0453683_0016936 3300044673 Bacteria 4697
178 Ga0453683_0038604 3300044673 Bacteria 3002
179 Ga0466963_0452548 3300044694 Bacteria 906
180 Ga0453684_0327584 3300044712 Unclassified 1733
181 Ga0451576_0495674 3300045051 Bacteria 1283
182 Ga0451576_0538733 3300045051 Bacteria 1226
183 Ga0466967_0397907 3300045976 Bacteria 1340
184 Ga0495658_0090000 3300046683 Bacteria 1816
185 Ga0495669_0019341 3300046684 Bacteria 2939
186 Ga0495684_0417856 3300047471 Bacteria 938
187 Ga0496111_0109482 3300048914 Bacteria 2034
188 Ga0496114_0001988 3300048917 Bacteria 15555
189 Ga0496115_0008012 3300048918 Bacteria 7796
190 Ga0501298_019787 3300049521 Bacteria 1249
191 Ga0501034_0031823 3300049571 Bacteria 5358
192 Ga0501036_0625399 3300049572 Unclassified 892
193 Ga0501037_0027914 3300049573 Bacteria 4171
194 Ga0501038_0039237 3300049574 Bacteria 4143
195 Ga0501038_0529696 3300049574 Bacteria 898
196 Ga0501043_0038683 3300049579 Bacteria 3751
197 Ga0501046_0054554 3300049580 Bacteria 3143
198 Ga0501047_0045743 3300049581 Unclassified 4231
199 Ga0501047_0682888 3300049581 Unclassified 845
200 Ga0501048_0111350 3300049582 Bacteria 1933
201 Ga0501067_0028961 3300049583 Bacteria 3070
202 Ga0501069_0072515 3300049585 Bacteria 1931
203 Ga0501069_0125268 3300049585 Bacteria 1469
204 Ga0501070_0035825 3300049586 Bacteria 4144
205 Ga0501073_0213798 3300049589 Bacteria 1332
206 Ga0501074_0133060 3300049590 Bacteria 1779
207 Ga0501075_0078373 3300049591 Bacteria 2501
208 Ga0501077_0127807 3300049593 Bacteria 1611
209 Ga0501249_005780 3300049679 Bacteria 2528
210 Ga0501234_070628 3300049707 Bacteria 603
211 Ga0501080_0414302 3300049742 Unclassified 1211
212 Ga0501268_025392 3300049765 Bacteria 1041
213 Ga0501035_0082749 3300049822 Bacteria 2832
214 Ga0501044_0117890 3300049823 Unclassified 2658
215 Ga0501045_0086152 3300049824 Bacteria 2319
216 nmdc:mga05p37_41611_c1 3300050507 Bacteria 5642
217 nmdc:mga05p37_601871_c1 3300050507 Bacteria 1241
218 nmdc:mga09592_245232_c1 3300050508 Bacteria 1553
219 nmdc:mga09592_74380_c1 3300050508 Bacteria 2887
220 nmdc:mga0qj67_99169_c1 3300050509 Unclassified 2347
221 nmdc:mga06r32_210328_c1 3300050510 Bacteria 1933
222 nmdc:mga08y16_1861_c1 3300050511 Bacteria 21450
223 nmdc:mga08y16_2813_c1 3300050511 Bacteria 17866
224 nmdc:mga08y16_91269_c1 3300050511 Bacteria 3175
225 nmdc:mga0n895_1193816_c1 3300050512 Bacteria 735
226 nmdc:mga0n895_25381_c1 3300050512 Bacteria 5598
227 nmdc:mga0n895_62939_c1 3300050512 Bacteria 3668
228 nmdc:mga0n895_7238_c1 3300050512 Bacteria 9505
229 nmdc:mga0rr50_20239_c1 3300050513 Bacteria 4512
230 nmdc:mga0rr50_46606_c1 3300050513 Bacteria 3192
231 nmdc:mga08x19_132_c1 3300050514 Bacteria 66208
232 nmdc:mga0a205_163342_c1 3300050515 Bacteria 2123
233 nmdc:mga0a205_455_c1 3300050515 Bacteria 31695
234 nmdc:mga0a205_8018_c1 3300050515 Bacteria 9600
235 Ga0501084_0098189 3300054114 Bacteria 2459
236 Ga0207428_10060055
237 JGI25160J50197_1013278
238 Ga0070690_100015732
239 Ga0068869_100003338
240 Ga0070680_100560609
241 Ga0070682_100913431
242 Ga0068868_100174903
243 Ga0070660_100041471
244 Ga0070689_100132528
245 Ga0070661_100050134
246 Ga0070669_100167585
247 Ga0070675_100057235
248 Ga0070674_100284152
249 Ga0070673_100016426
250 Ga0070673_100364616
251 Ga0070659_100060515
252 Ga0070659_100217857
253 Ga0070709_10189979
254 Ga0070714_100010005
255 Ga0070714_100628986
256 Ga0070701_10052953
257 Ga0070705_100137693
258 Ga0070700_100003422
259 Ga0070708_100151076
260 Ga0070678_100063284
261 Ga0070681_10276080
262 Ga0070681_10300560
263 Ga0068867_100027351
264 Ga0070679_100058411
265 Ga0070679_100343440
266 Ga0070679_100452510
267 Ga0070684_100001189
268 Ga0070684_100673115
269 Ga0068853_100014052
270 Ga0070672_100020537
271 Ga0070665_100126538
272 Ga0068855_100190466
273 Ga0068857_101146890
274 Ga0068856_100303106
275 Ga0068856_100306394
276 Ga0070702_100266785
277 Ga0070702_100300116
278 Ga0068852_100201191
279 Ga0068859_100930470
280 Ga0068866_10531533
281 Ga0068861_100054318
282 Ga0068861_100094436
283 Ga0068870_10004930
284 Ga0068858_100051617
285 Ga0068860_100036834
286 Ga0081455_10025677
287 Ga0070717_10121818
288 Ga0070717_10892619
289 Ga0097621_100122510
290 Ga0075428_100008825
291 Ga0075428_100065680
292 Ga0075428_101136191
293 Ga0075430_100033558
294 Ga0075430_100044395
295 Ga0075431_100089490
296 Ga0075431_100108806
297 Ga0075431_100269038
298 Ga0075433_10007307
299 Ga0075433_10032341
300 Ga0075433_10061704
301 Ga0075434_100004152
302 Ga0075434_100014042
303 Ga0075434_100048927
304 Ga0075429_100065550
305 Ga0097620_100930511
306 Ga0075435_100010740
307 Ga0075435_100166835
308 Ga0111539_10033529
309 Ga0111539_10089338
310 Ga0111539_10136409
311 Ga0111539_10682701
312 Ga0114129_10054093
313 Ga0114129_10092637
314 Ga0105243_10031234
315 Ga0105241_10134986
316 Ga0105238_10000010
317 Ga0105238_10229853
318 Ga0157370_10098853
319 Ga0157370_10292936
320 Ga0157370_10433568
321 Ga0157370_10561825
322 Ga0157369_10004638
323 Ga0157369_10201872
324 Ga0157374_10000008
325 Ga0157374_10001458
326 Ga0157374_10014343
327 Ga0157378_10007412
328 Ga0157372_10053279
329 Ga0157375_10037895
330 Ga0157377_10000007
331 Ga0157376_10442722
332 Ga0213873_10002389
333 Ga0213875_10001971
334 Ga0213875_10032097
335 Ga0213871_10030330
336 Ga0209130_1002090
337 Ga0207426_1000304
338 Ga0207699_10172494
339 Ga0207643_10033123
340 Ga0207707_10104496
341 Ga0207707_10427668
342 Ga0207695_10023445
343 Ga0207695_10693245
344 Ga0207662_10025592
345 Ga0207657_10023075
346 Ga0207649_10032633
347 Ga0207681_10010994
348 Ga0207694_10000002
349 Ga0207694_10000003
350 Ga0207659_10033175
351 Ga0207664_10114866
352 Ga0207664_10856291
353 Ga0207690_10074188
354 Ga0207690_10257130
355 Ga0207709_10016706
356 Ga0207670_10170280
357 Ga0207691_10067338
358 Ga0207689_10006903
359 Ga0207689_10278345
360 Ga0207661_10000002
361 Ga0207661_10174366
362 Ga0207667_10151822
363 Ga0207651_10010252
364 Ga0207651_10086374
365 Ga0207640_10021793
366 Ga0207640_10041306
367 Ga0207639_10067444
368 Ga0207702_10217722
369 Ga0207702_10375719
370 Ga0207702_10479944
371 Ga0207648_10001829
372 Ga0207674_10560179
373 Ga0207674_10638950
374 Ga0207675_100060587
375 Ga0207675_100088404
376 Ga0207683_10206366
377 Ga0209995_1020087
378 Ga0209974_10027531
379 Ga0207428_10000324
380 Ga0207428_10103204
381 Ga0268265_10424052
382 Ga0268264_10026203
383 Ga0316575_10210590
384 Ga0307405_10113331
385 Ga0307412_11178243
386 Ga0373928_0045496
387 Ga0373936_0122942
388 Ga0373943_0098068
389 Ga0373946_0002728
390 Ga0373955_0062669
391 Ga0373961_0000862
392 Ga0373935_0001509
393 Ga0373935_0085004
394 Ga0395900_0296602
395 Ga0395898_0291812
396 Ga0436364_0248845
397 Ga0436364_0282738
398 Ga0436365_0970387
399 Ga0436365_1473599
400 Ga0436365_1628423
401 Ga0436360_0222243
402 Ga0436361_0754359
403 Ga0436361_0843689
404 Ga0436362_0117558
405 Ga0439447_067472
406 Ga0439433_0009947
407 Ga0439446_0001344
408 Ga0439434_0008285
409 Ga0451577_0191669
410 Ga0451577_0980713
411 Ga0453683_0000327
412 Ga0453683_0016936
413 Ga0453683_0038604
414 Ga0466963_0452548
415 Ga0453684_0327584
416 Ga0451576_0495674
417 Ga0451576_0538733
418 Ga0466967_0397907
419 Ga0495658_0090000
420 Ga0495669_0019341
421 Ga0495684_0417856
422 Ga0496111_0109482
423 Ga0496114_0001988
424 Ga0496115_0008012
425 Ga0501298_019787
426 Ga0501034_0031823
427 Ga0501036_0625399
428 Ga0501037_0027914
429 Ga0501038_0039237
430 Ga0501038_0529696
431 Ga0501043_0038683
432 Ga0501046_0054554
433 Ga0501047_0045743
434 Ga0501047_0682888
435 Ga0501048_0111350
436 Ga0501067_0028961
437 Ga0501069_0072515
438 Ga0501069_0125268
439 Ga0501070_0035825
440 Ga0501073_0213798
441 Ga0501074_0133060
442 Ga0501075_0078373
443 Ga0501077_0127807
444 Ga0501249_005780
445 Ga0501234_070628
446 Ga0501080_0414302
447 Ga0501268_025392
448 Ga0501035_0082749
449 Ga0501044_0117890
450 Ga0501045_0086152
451 nmdc:mga05p37_41611_c1
452 nmdc:mga05p37_601871_c1
453 nmdc:mga09592_245232_c1
454 nmdc:mga09592_74380_c1
455 nmdc:mga0qj67_99169_c1
456 nmdc:mga06r32_210328_c1
457 nmdc:mga08y16_1861_c1
458 nmdc:mga08y16_2813_c1
459 nmdc:mga08y16_91269_c1
460 nmdc:mga0n895_1193816_c1
461 nmdc:mga0n895_25381_c1
462 nmdc:mga0n895_62939_c1
463 nmdc:mga0n895_7238_c1
464 nmdc:mga0rr50_20239_c1
465 nmdc:mga0rr50_46606_c1
466 nmdc:mga08x19_132_c1
467 nmdc:mga0a205_163342_c1
468 nmdc:mga0a205_455_c1
469 nmdc:mga0a205_8018_c1
470 Ga0501084_0098189

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00551

Formyl_trans_N

Formyl transferase

26

206

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1c2t-assembly1.cif.gz_A new insights into inhibitor design from the crystal structure and nmr studies of e. coli gar transformylase in complex with beta-gar and 10-formyl-5,8,10-trideazafolic acid. 0.9769 4 196
5j9f-assembly2.cif.gz_A human gar transformylase in complex with gar and (4-{[2-(2-amino-4-oxo-4,7-dihydro-3h-pyrrolo[2,3-d]pyrimidin-6-yl)ethyl]amino}benzoyl)-l-glutamic acid (agf183) 0.9698 5 204
3gar-assembly1.cif.gz_A-2 a ph-dependent stablization of an active site loop observed from low and high ph crystal structures of mutant monomeric glycinamide ribonucleotide transformylase 0.969 4 196
1men-assembly1.cif.gz_A complex structure of human gar tfase and substrate beta-gar 0.9681 3 204
4s1n-assembly1.cif.gz_A the crystal structure of phosphoribosylglycinamide formyltransferase from streptococcus pneumoniae tigr4 0.9668 4 187
ID Description Score Start End Superfamily
af_Q20143_783_975_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9862 3 190 3.40.50.170
1njsA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.969 5 204 3.40.50.170
4s1nA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9665 5 187 3.40.50.170
3aufA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.963 3 203 3.40.50.170
af_Q2FZI7_1_188_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9614 4 187 3.40.50.170
ID Description Score Start End GO Terms
AF-A0A3C0KBB1-F1-model_v4 phosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) 0.9962 106 189 GO:0004644
GO:0005829
GO:0006189
AF-A0A381TCJ8-F1-model_v4 phosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2) 0.9952 17 159 GO:0004644
GO:0005829
GO:0006189
AF-A0A1Q9AT05-F1-model_v4 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART) 0.9943 2 193 GO:0004644
GO:0005829
GO:0006189
AF-A0A2A4S4D6-F1-model_v4 deleted 0.9942 4 158
AF-A0A2S6TU45-F1-model_v4 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) (GART) 0.9932 4 196 GO:0004644
GO:0005829
GO:0006189

Map