F347735
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 235 | 190 | 470 | 388 |
Family's Representative Sequence
| Representative Sequence | 3300005327|Ga0070658_10000583|Ga0070658_1000058315 |
| Length | 427 |
| Sequence | MTNPEPENRDAENGLRFSSEPAFTITPPRKPLNTVITNCPPSGIRRFFDIAQSMENVISLGVGEPDFVTPWRIREAGIWSLEKGYTTYTSNSGLKTLRQRICAMMRRRYDAHYDPDTECLITVGVSEGLDLALRVVLNPGDEVLVPEPCYVSYIPCIEFAGGVAVPIKTDAEDGFRLHADRVAAAITPRTKAMLLGSPANPTGATQSREDLNRLVALANQHDFYLLSDEIYDRLTYVGAHTCLGSLPGARERTIVFNGFSKAYAMTGWRVGYICAPEPLTTLMTRVHQYTMLCAPHVSQIAAQEALENAESDVEAMISEYDRRRRLFVNGLNEIGLDCYEPRGAFYAFPSIRRTGLSSEEFAERLLMEERVAVVPGSAFGPSGEGHVRCSYATALPQLEQALERMGRFVRRITTQNTENDAVSGIRR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300002073 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 | Metagenome | Rhizosphere |
| 3 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 4 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 5 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 6 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 7 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 8 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 9 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 10 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 11 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 12 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 13 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 20 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 22 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 24 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 28 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 29 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 30 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 33 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 34 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 35 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 36 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 37 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 38 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 39 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 40 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 41 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 42 | 3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Metagenome | Rhizosphere |
| 43 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300012495 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610 | Metagenome | Rhizosphere |
| 52 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 59 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300027252 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 95 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 96 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 97 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 98 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 99 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 100 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 101 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 102 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 103 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 104 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 105 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 106 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 107 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 119 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 120 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 121 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 122 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 123 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 124 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 125 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 126 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 127 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 128 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 129 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 130 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 131 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 132 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 133 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 134 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 135 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 136 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 137 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 138 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 139 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 140 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 141 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 142 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 143 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 145 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 146 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 147 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 149 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 150 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 151 | 2510917027 | Brevibacillus sp. CF112 | Isolate | Rhizosphere |
| 152 | 2512564013 | Brevibacillus sp. BC25 | Isolate | Rhizosphere |
| 153 | 2558860112 | Pseudonocardia acaciae DSM 45401 | Isolate | Unclassified |
| 154 | 2643221731 | Bacillus sp. Root147 | Isolate | Unclassified |
| 155 | 2643221732 | Bacillus sp. Root239 | Isolate | Unclassified |
| 156 | 2675902999 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 157 | 2687453737 | Frankia sp. BMG5.36 | Isolate | Nodule |
| 158 | 2744054657 | Brevibacillus sp. SKDU10 | Isolate | Unclassified |
| 159 | 2773857921 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 160 | 2808606364 | Bacillus sp. SLBN-3 | Isolate | Unclassified |
| 161 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 162 | 2816332336 | Brevibacillus laterosporus ZQ2 | Isolate | Unclassified |
| 163 | 2818991441 | Niallia circulans 3243 | Isolate | Rhizosphere |
| 164 | 2818991465 | Priestia megaterium 3291 | Isolate | Rhizosphere |
| 165 | 2842882022 | Bacillus sp. R-71893 | Isolate | Unclassified |
| 166 | 2857460504 | Brevibacillus sp. R-74223 | Isolate | Unclassified |
| 167 | 2857465823 | Brevibacillus sp. R-74266 | Isolate | Unclassified |
| 168 | 2857591370 | Brevibacillus sp. R-71934 | Isolate | Unclassified |
| 169 | 2857609550 | Domibacillus sp. R-71929 | Isolate | Unclassified |
| 170 | 2870782633 | Pseudonocardia eucalypti DSM 45351 | Isolate | Unclassified |
| 171 | 2904524088 | Priestia megaterium 1428 | Isolate | Rhizosphere |
| 172 | 2915358134 | Pseudonocardia pini CAP47R | Isolate | Unclassified |
| 173 | 2915597211 | Brevibacillus brevis Ag35 | Isolate | Nodule |
| 174 | 2915606848 | Brevibacillus sp. HD1.4A | Isolate | Rhizosphere |
| 175 | 2919143609 | Priestia megaterium 1751 | Isolate | Rhizosphere |
| 176 | 2919517244 | Priestia aryabhattai 3820 | Isolate | Unclassified |
| 177 | 2919720352 | Priestia megaterium 4340 | Isolate | Unclassified |
| 178 | 2928093941 | Priestia aryabhattai 1389 | Isolate | Rhizosphere |
| 179 | 2929004312 | Priestia megaterium 1104 | Isolate | Unclassified |
| 180 | 2929183550 | Brevibacillus sp. R-71971 Hybrid assembly | Isolate | Unclassified |
| 181 | 2936361878 | Neobacillus endophyticus BRMEA1 | Isolate | Unclassified |
| 182 | 2956897341 | Ectobacillus funiculus W18-2 | Isolate | Rhizosphere |
| 183 | 2960319331 | Priestia megaterium AFS057444 | Isolate | Unclassified |
| 184 | 2960375949 | Priestia megaterium AFS067084 | Isolate | Unclassified |
| 185 | 2977254563 | Bacillus sp. SORGH_AS 510 | Isolate | Unclassified |
| 186 | 3006826541 | Bacillus haikouensis CrR16 | Isolate | Unclassified |
| 187 | 3006984091 | Lederbergia citrea FJAT-49754 | Isolate | Rhizosphere |
| 188 | 8022893055 | Bacillus aryabhattai AFS007213 | Isolate | Unclassified |
| 189 | 8022914991 | Bacillus aryabhattai SQU-R12 | Isolate | Unclassified |
| 190 | 8054472261 | Pseudonocardia terrae RS11V-5 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 82.55 |
| Metatranscriptomes | 0.43 |
| Isolates | 17.02 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.26 |
| Nodule | 1.7 |
| Rhizoplane | 7.66 |
| Rhizosphere | 65.96 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 5.11 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070658_10000583 | 3300005327 | Bacteria | 31678 |
| 2 | JGI24745J21846_1000778 | 3300002073 | Bacteria | 2919 |
| 3 | JGI25151J46595_10001653 | 3300003187 | Bacteria | 14646 |
| 4 | rootH1_10001505 | 3300003316 | Bacteria | 52069 |
| 5 | rootH2_10026420 | 3300003320 | Bacteria | 2416 |
| 6 | rootL2_10010347 | 3300003322 | Bacteria | 37669 |
| 7 | rootL2_10153533 | 3300003322 | Bacteria | 4965 |
| 8 | Ga0006562J51391_1000466 | 3300003578 | Bacteria | 3068 |
| 9 | Ga0055532_1002282 | 3300003758 | Bacteria | 4151 |
| 10 | Ga0055532_1003984 | 3300003758 | Bacteria | 2348 |
| 11 | Ga0055536_1000622 | 3300003781 | Bacteria | 24093 |
| 12 | Ga0055528_1001251 | 3300003790 | Bacteria | 16136 |
| 13 | Ga0070683_100322467 | 3300005329 | Bacteria | 1470 |
| 14 | Ga0070680_100000006 | 3300005336 | Bacteria | 113367 |
| 15 | Ga0070680_100032150 | 3300005336 | Bacteria | 4221 |
| 16 | Ga0070680_100084586 | 3300005336 | Bacteria | 2620 |
| 17 | Ga0070691_10088695 | 3300005341 | Bacteria | 1523 |
| 18 | Ga0070692_10073522 | 3300005345 | Bacteria | 1826 |
| 19 | Ga0070671_100004980 | 3300005355 | Bacteria | 10578 |
| 20 | Ga0070671_100014173 | 3300005355 | Bacteria | 6436 |
| 21 | Ga0070667_100162662 | 3300005367 | Bacteria | 1967 |
| 22 | Ga0070667_100173950 | 3300005367 | Bacteria | 1902 |
| 23 | Ga0070714_100188899 | 3300005435 | Unclassified | 1879 |
| 24 | Ga0070713_100046609 | 3300005436 | Unclassified | 3557 |
| 25 | Ga0070694_100006405 | 3300005444 | Bacteria | 7140 |
| 26 | Ga0070694_100138434 | 3300005444 | Bacteria | 1766 |
| 27 | Ga0070708_100108162 | 3300005445 | Unclassified | 2553 |
| 28 | Ga0070681_10085947 | 3300005458 | Bacteria | 3098 |
| 29 | Ga0070685_10011659 | 3300005466 | Bacteria | 4606 |
| 30 | Ga0070685_10061409 | 3300005466 | Bacteria | 2201 |
| 31 | Ga0070706_100000652 | 3300005467 | Bacteria | 39619 |
| 32 | Ga0070707_100001833 | 3300005468 | Bacteria | 20413 |
| 33 | Ga0070707_100024107 | 3300005468 | Bacteria | 5759 |
| 34 | Ga0070707_100175065 | 3300005468 | Unclassified | 2091 |
| 35 | Ga0070698_100052541 | 3300005471 | Unclassified | 4145 |
| 36 | Ga0070698_100082460 | 3300005471 | Bacteria | 3208 |
| 37 | Ga0070699_100127704 | 3300005518 | Bacteria | 2240 |
| 38 | Ga0070679_100081291 | 3300005530 | Bacteria | 3229 |
| 39 | Ga0070684_100054227 | 3300005535 | Bacteria | 3493 |
| 40 | Ga0070684_100351688 | 3300005535 | Bacteria | 1355 |
| 41 | Ga0070697_100012702 | 3300005536 | Bacteria | 6596 |
| 42 | Ga0070697_100140980 | 3300005536 | Unclassified | 2027 |
| 43 | Ga0070697_100160508 | 3300005536 | Bacteria | 1899 |
| 44 | Ga0070672_100078319 | 3300005543 | Bacteria | 2645 |
| 45 | Ga0070665_100002845 | 3300005548 | Bacteria | 18736 |
| 46 | Ga0070665_100250900 | 3300005548 | Bacteria | 1770 |
| 47 | Ga0068855_100001705 | 3300005563 | Bacteria | 27495 |
| 48 | Ga0068855_100077773 | 3300005563 | Bacteria | 3850 |
| 49 | Ga0068855_100216667 | 3300005563 | Bacteria | 2149 |
| 50 | Ga0068857_100097709 | 3300005577 | Bacteria | 2633 |
| 51 | Ga0068857_100158688 | 3300005577 | Bacteria | 2052 |
| 52 | Ga0068852_100034308 | 3300005616 | Bacteria | 4220 |
| 53 | Ga0068852_100153047 | 3300005616 | Bacteria | 2146 |
| 54 | Ga0068863_100001528 | 3300005841 | Bacteria | 22870 |
| 55 | Ga0068858_100023274 | 3300005842 | Bacteria | 5773 |
| 56 | Ga0068858_100186079 | 3300005842 | Bacteria | 1961 |
| 57 | Ga0068860_100006534 | 3300005843 | Bacteria | 11702 |
| 58 | Ga0081539_10002575 | 3300005985 | Bacteria | 25032 |
| 59 | Ga0070717_10007567 | 3300006028 | Bacteria | 8071 |
| 60 | Ga0070717_10044762 | 3300006028 | Bacteria | 3616 |
| 61 | Ga0070717_10148474 | 3300006028 | Bacteria | 2027 |
| 62 | Ga0070712_100193869 | 3300006175 | Unclassified | 1592 |
| 63 | Ga0075430_100042108 | 3300006846 | Bacteria | 3862 |
| 64 | Ga0099795_10014791 | 3300007788 | Bacteria | 2428 |
| 65 | Ga0111539_10089044 | 3300009094 | Bacteria | 3626 |
| 66 | Ga0105245_10011292 | 3300009098 | Bacteria | 7777 |
| 67 | Ga0105247_10018473 | 3300009101 | Bacteria | 4182 |
| 68 | Ga0105243_10000533 | 3300009148 | Bacteria | 38676 |
| 69 | Ga0105242_10001850 | 3300009176 | Bacteria | 16601 |
| 70 | Ga0105242_10365551 | 3300009176 | Bacteria | 1336 |
| 71 | Ga0105249_10029380 | 3300009553 | Bacteria | 4964 |
| 72 | Ga0105239_10010987 | 3300010375 | Bacteria | 10107 |
| 73 | Ga0105239_10024923 | 3300010375 | Bacteria | 6589 |
| 74 | Ga0105246_10004396 | 3300011119 | Bacteria | 8580 |
| 75 | Ga0157323_1001302 | 3300012495 | Bacteria | 1229 |
| 76 | Ga0157370_10073057 | 3300013104 | Bacteria | 3236 |
| 77 | Ga0157378_10004124 | 3300013297 | Bacteria | 12830 |
| 78 | Ga0157372_10150358 | 3300013307 | Bacteria | 2687 |
| 79 | Ga0157372_10256606 | 3300013307 | Bacteria | 2030 |
| 80 | Ga0157377_10007451 | 3300014745 | Bacteria | 5286 |
| 81 | Ga0157379_10012698 | 3300014968 | Bacteria | 7362 |
| 82 | Ga0209147_100054 | 3300025229 | Bacteria | 266796 |
| 83 | Ga0209147_100382 | 3300025229 | Bacteria | 30814 |
| 84 | Ga0209673_1004114 | 3300025273 | Bacteria | 7987 |
| 85 | Ga0209676_1001687 | 3300025292 | Bacteria | 19133 |
| 86 | Ga0207426_1005812 | 3300025302 | Bacteria | 5523 |
| 87 | Ga0207655_1004727 | 3300025728 | Bacteria | 9516 |
| 88 | Ga0207713_1001545 | 3300025735 | Bacteria | 18087 |
| 89 | Ga0207710_10075522 | 3300025900 | Bacteria | 1553 |
| 90 | Ga0207688_10005332 | 3300025901 | Bacteria | 6981 |
| 91 | Ga0207680_10077497 | 3300025903 | Bacteria | 2079 |
| 92 | Ga0207645_10033830 | 3300025907 | Bacteria | 3285 |
| 93 | Ga0207643_10059426 | 3300025908 | Bacteria | 2181 |
| 94 | Ga0207705_10000818 | 3300025909 | Bacteria | 25483 |
| 95 | Ga0207705_10083151 | 3300025909 | Bacteria | 2335 |
| 96 | Ga0207684_10000698 | 3300025910 | Bacteria | 39706 |
| 97 | Ga0207684_10017031 | 3300025910 | Bacteria | 6242 |
| 98 | Ga0207693_10230992 | 3300025915 | Unclassified | 1453 |
| 99 | Ga0207652_10098703 | 3300025921 | Bacteria | 2576 |
| 100 | Ga0207646_10004060 | 3300025922 | Bacteria | 16158 |
| 101 | Ga0207646_10192836 | 3300025922 | Unclassified | 1840 |
| 102 | Ga0207687_10092371 | 3300025927 | Bacteria | 2210 |
| 103 | Ga0207687_10107698 | 3300025927 | Bacteria | 2063 |
| 104 | Ga0207700_10002005 | 3300025928 | Bacteria | 11612 |
| 105 | Ga0207644_10001172 | 3300025931 | Bacteria | 16819 |
| 106 | Ga0207706_10035637 | 3300025933 | Bacteria | 4423 |
| 107 | Ga0207686_10195798 | 3300025934 | Bacteria | 1444 |
| 108 | Ga0207669_10063594 | 3300025937 | Bacteria | 2279 |
| 109 | Ga0207691_10043277 | 3300025940 | Bacteria | 4151 |
| 110 | Ga0207667_10004454 | 3300025949 | Bacteria | 17149 |
| 111 | Ga0207651_10097890 | 3300025960 | Bacteria | 2168 |
| 112 | Ga0207640_10033447 | 3300025981 | Unclassified | 3199 |
| 113 | Ga0207677_10029199 | 3300026023 | Bacteria | 3500 |
| 114 | Ga0207703_10003432 | 3300026035 | Bacteria | 13307 |
| 115 | Ga0207708_10051236 | 3300026075 | Bacteria | 3142 |
| 116 | Ga0207641_10000653 | 3300026088 | Bacteria | 37782 |
| 117 | Ga0207676_10049823 | 3300026095 | Bacteria | 3261 |
| 118 | Ga0207676_10170997 | 3300026095 | Bacteria | 1893 |
| 119 | Ga0207674_10097146 | 3300026116 | Bacteria | 2929 |
| 120 | Ga0207675_100010081 | 3300026118 | Bacteria | 8859 |
| 121 | Ga0209973_1001031 | 3300027252 | Bacteria | 2304 |
| 122 | Ga0268266_10026468 | 3300028379 | Bacteria | 4935 |
| 123 | Ga0268265_10034054 | 3300028380 | Bacteria | 3710 |
| 124 | Ga0268264_10012511 | 3300028381 | Bacteria | 6987 |
| 125 | Ga0265327_10040071 | 3300031251 | Bacteria | 2537 |
| 126 | Ga0307513_10002547 | 3300031456 | Bacteria | 25196 |
| 127 | Ga0316575_10041325 | 3300031665 | Bacteria | 1824 |
| 128 | Ga0316576_10081941 | 3300031727 | Bacteria | 2395 |
| 129 | Ga0307416_100345171 | 3300032002 | Bacteria | 1504 |
| 130 | Ga0307416_100403124 | 3300032002 | Bacteria | 1406 |
| 131 | Ga0395905_0186810 | 3300037471 | Bacteria | 1945 |
| 132 | Ga0436365_1823034 | 3300039437 | Bacteria | 2245 |
| 133 | Ga0466972_0011492 | 3300044658 | Bacteria | 4446 |
| 134 | Ga0466965_0000589 | 3300044683 | Bacteria | 13213 |
| 135 | Ga0466963_0113912 | 3300044694 | Bacteria | 1858 |
| 136 | Ga0453684_0000575 | 3300044712 | Bacteria | 136633 |
| 137 | Ga0466960_0000203 | 3300044901 | Bacteria | 20545 |
| 138 | Ga0466967_0152449 | 3300045976 | Bacteria | 2162 |
| 139 | Ga0466967_0363727 | 3300045976 | Bacteria | 1402 |
| 140 | Ga0495650_0066477 | 3300046471 | Bacteria | 1427 |
| 141 | Ga0495664_0027079 | 3300046477 | Unclassified | 3341 |
| 142 | Ga0495594_0040909 | 3300046499 | Bacteria | 2538 |
| 143 | Ga0495618_0035416 | 3300046514 | Bacteria | 3133 |
| 144 | Ga0495618_0046212 | 3300046514 | Bacteria | 2748 |
| 145 | Ga0495640_0105378 | 3300046533 | Unclassified | 1847 |
| 146 | Ga0495667_0004002 | 3300046559 | Bacteria | 9897 |
| 147 | Ga0495634_0036171 | 3300046642 | Bacteria | 3378 |
| 148 | Ga0495634_0037320 | 3300046642 | Bacteria | 3321 |
| 149 | Ga0495599_0045644 | 3300046678 | Bacteria | 2748 |
| 150 | Ga0495600_0014901 | 3300046809 | Bacteria | 4907 |
| 151 | Ga0495674_0006132 | 3300047319 | Bacteria | 11544 |
| 152 | Ga0496100_0001431 | 3300048903 | Bacteria | 11672 |
| 153 | Ga0496100_0003206 | 3300048903 | Bacteria | 8491 |
| 154 | Ga0496101_0037701 | 3300048904 | Bacteria | 3431 |
| 155 | Ga0496102_0000157 | 3300048905 | Bacteria | 92353 |
| 156 | Ga0496102_0154669 | 3300048905 | Bacteria | 2156 |
| 157 | Ga0496103_0000106 | 3300048906 | Bacteria | 92315 |
| 158 | Ga0496103_0002963 | 3300048906 | Bacteria | 10508 |
| 159 | Ga0496104_0008327 | 3300048907 | Bacteria | 9209 |
| 160 | Ga0496104_0040453 | 3300048907 | Bacteria | 4369 |
| 161 | Ga0496105_0000623 | 3300048908 | Bacteria | 23715 |
| 162 | Ga0496107_0002676 | 3300048910 | Bacteria | 11672 |
| 163 | Ga0496108_0002836 | 3300048911 | Bacteria | 13912 |
| 164 | Ga0496110_0125501 | 3300048913 | Bacteria | 2315 |
| 165 | Ga0496111_0024745 | 3300048914 | Bacteria | 4233 |
| 166 | Ga0496111_0112685 | 3300048914 | Bacteria | 2004 |
| 167 | Ga0496112_0011561 | 3300048915 | Bacteria | 8066 |
| 168 | Ga0496113_0005061 | 3300048916 | Bacteria | 8181 |
| 169 | Ga0496115_0004272 | 3300048918 | Bacteria | 10341 |
| 170 | Ga0496116_0000101 | 3300048919 | Bacteria | 194587 |
| 171 | Ga0496116_0007801 | 3300048919 | Bacteria | 9409 |
| 172 | Ga0496117_0000364 | 3300048920 | Bacteria | 78857 |
| 173 | Ga0496118_0000069 | 3300048921 | Bacteria | 203439 |
| 174 | Ga0496118_0057381 | 3300048921 | Bacteria | 2919 |
| 175 | Ga0496119_0000777 | 3300048922 | Bacteria | 42677 |
| 176 | Ga0496119_0003139 | 3300048922 | Bacteria | 17399 |
| 177 | Ga0496120_0004724 | 3300048923 | Bacteria | 11218 |
| 178 | Ga0496120_0053137 | 3300048923 | Bacteria | 2303 |
| 179 | Ga0496121_0022456 | 3300048924 | Bacteria | 6122 |
| 180 | Ga0496122_0025722 | 3300048925 | Bacteria | 5100 |
| 181 | Ga0496123_0108998 | 3300048926 | Bacteria | 1588 |
| 182 | Ga0496124_0066585 | 3300048927 | Bacteria | 2999 |
| 183 | Ga0496125_0007663 | 3300048928 | Bacteria | 11441 |
| 184 | Ga0496125_0032147 | 3300048928 | Bacteria | 4664 |
| 185 | Ga0496126_0000372 | 3300048929 | Bacteria | 92561 |
| 186 | Ga0501042_0108463 | 3300049578 | Bacteria | 1999 |
| 187 | Ga0501069_0027841 | 3300049585 | Bacteria | 3098 |
| 188 | Ga0501071_0305321 | 3300049587 | Bacteria | 1207 |
| 189 | Ga0501079_0156663 | 3300049741 | Bacteria | 1775 |
| 190 | Ga0501081_0066382 | 3300049743 | Bacteria | 2509 |
| 191 | Ga0501044_0364803 | 3300049823 | Bacteria | 1362 |
| 192 | nmdc:mga08y16_50570_c1 | 3300050511 | Bacteria | 4349 |
| 193 | Ga0495619_0005523 | 3300053085 | Bacteria | 8023 |
| 194 | Ga0501084_0312204 | 3300054114 | Bacteria | 1328 |
| 195 | Ga0530510_0004904 | 3300061734 | Bacteria | 9243 |
| 196 | 2511177910 | 2510917027 | Bacteria | 5287437 |
| 197 | 2512638366 | 2512564013 | Bacteria | 6286191 |
| 198 | 2558911914 | 2558860112 | Bacteria | 9931328 |
| 199 | 2644720231 | 2643221731 | Bacteria | 5623886 |
| 200 | 2644726689 | 2643221732 | Bacteria | 5756404 |
| 201 | 2676199444 | 2675902999 | Bacteria | 9438463 |
| 202 | 2689960380 | 2687453737 | Bacteria | 11203906 |
| 203 | 2745166003 | 2744054657 | Bacteria | 5016802 |
| 204 | 2774844022 | 2773857921 | Bacteria | 9435764 |
| 205 | 2808869946 | 2808606364 | Bacteria | 4465927 |
| 206 | 2816510502 | 2816332139 | Bacteria | 9138787 |
| 207 | 2817620794 | 2816332336 | Bacteria | 5207640 |
| 208 | 2819570556 | 2818991441 | Bacteria | 5062707 |
| 209 | 2819711274 | 2818991465 | Bacteria | 5388835 |
| 210 | 2842886167 | 2842882022 | Bacteria | 6158489 |
| 211 | 2857463959 | 2857460504 | Bacteria | 5194327 |
| 212 | 2857471940 | 2857465823 | Bacteria | 6772595 |
| 213 | 2857594257 | 2857591370 | Bacteria | 6569758 |
| 214 | 2857609560 | 2857609550 | Bacteria | 3753890 |
| 215 | 2870785201 | 2870782633 | Bacteria | 9624083 |
| 216 | 2904528581 | 2904524088 | Bacteria | 5887454 |
| 217 | 2915359267 | 2915358134 | Bacteria | 6050864 |
| 218 | 2915599683 | 2915597211 | Bacteria | 6475886 |
| 219 | 2915610118 | 2915606848 | Bacteria | 6032732 |
| 220 | 2919148212 | 2919143609 | Bacteria | 6219228 |
| 221 | 2919522021 | 2919517244 | Bacteria | 5858162 |
| 222 | 2919725155 | 2919720352 | Bacteria | 5986006 |
| 223 | 2928098449 | 2928093941 | Bacteria | 5965005 |
| 224 | 2929007879 | 2929004312 | Bacteria | 5678476 |
| 225 | 2929184840 | 2929183550 | Bacteria | 6377511 |
| 226 | 2936362841 | 2936361878 | Bacteria | 5632809 |
| 227 | 2956899637 | 2956897341 | Bacteria | 5447711 |
| 228 | 2960321145 | 2960319331 | Bacteria | 5502575 |
| 229 | 2960378394 | 2960375949 | Bacteria | 5361395 |
| 230 | 2977255729 | 2977254563 | Bacteria | 4828420 |
| 231 | 3006829474 | 3006826541 | Bacteria | 4678913 |
| 232 | 3006986662 | 3006984091 | Bacteria | 4207523 |
| 233 | 8022894195 | 8022893055 | Bacteria | 5300455 |
| 234 | 8022918694 | 8022914991 | Bacteria | 5584517 |
| 235 | 8054474651 | 8054472261 | Bacteria | 7464355 |
| 236 | Ga0070658_10000583 | |||
| 237 | JGI24745J21846_1000778 | |||
| 238 | JGI25151J46595_10001653 | |||
| 239 | rootH1_10001505 | |||
| 240 | rootH2_10026420 | |||
| 241 | rootL2_10010347 | |||
| 242 | rootL2_10153533 | |||
| 243 | Ga0006562J51391_1000466 | |||
| 244 | Ga0055532_1002282 | |||
| 245 | Ga0055532_1003984 | |||
| 246 | Ga0055536_1000622 | |||
| 247 | Ga0055528_1001251 | |||
| 248 | Ga0070683_100322467 | |||
| 249 | Ga0070680_100000006 | |||
| 250 | Ga0070680_100032150 | |||
| 251 | Ga0070680_100084586 | |||
| 252 | Ga0070691_10088695 | |||
| 253 | Ga0070692_10073522 | |||
| 254 | Ga0070671_100004980 | |||
| 255 | Ga0070671_100014173 | |||
| 256 | Ga0070667_100162662 | |||
| 257 | Ga0070667_100173950 | |||
| 258 | Ga0070714_100188899 | |||
| 259 | Ga0070713_100046609 | |||
| 260 | Ga0070694_100006405 | |||
| 261 | Ga0070694_100138434 | |||
| 262 | Ga0070708_100108162 | |||
| 263 | Ga0070681_10085947 | |||
| 264 | Ga0070685_10011659 | |||
| 265 | Ga0070685_10061409 | |||
| 266 | Ga0070706_100000652 | |||
| 267 | Ga0070707_100001833 | |||
| 268 | Ga0070707_100024107 | |||
| 269 | Ga0070707_100175065 | |||
| 270 | Ga0070698_100052541 | |||
| 271 | Ga0070698_100082460 | |||
| 272 | Ga0070699_100127704 | |||
| 273 | Ga0070679_100081291 | |||
| 274 | Ga0070684_100054227 | |||
| 275 | Ga0070684_100351688 | |||
| 276 | Ga0070697_100012702 | |||
| 277 | Ga0070697_100140980 | |||
| 278 | Ga0070697_100160508 | |||
| 279 | Ga0070672_100078319 | |||
| 280 | Ga0070665_100002845 | |||
| 281 | Ga0070665_100250900 | |||
| 282 | Ga0068855_100001705 | |||
| 283 | Ga0068855_100077773 | |||
| 284 | Ga0068855_100216667 | |||
| 285 | Ga0068857_100097709 | |||
| 286 | Ga0068857_100158688 | |||
| 287 | Ga0068852_100034308 | |||
| 288 | Ga0068852_100153047 | |||
| 289 | Ga0068863_100001528 | |||
| 290 | Ga0068858_100023274 | |||
| 291 | Ga0068858_100186079 | |||
| 292 | Ga0068860_100006534 | |||
| 293 | Ga0081539_10002575 | |||
| 294 | Ga0070717_10007567 | |||
| 295 | Ga0070717_10044762 | |||
| 296 | Ga0070717_10148474 | |||
| 297 | Ga0070712_100193869 | |||
| 298 | Ga0075430_100042108 | |||
| 299 | Ga0099795_10014791 | |||
| 300 | Ga0111539_10089044 | |||
| 301 | Ga0105245_10011292 | |||
| 302 | Ga0105247_10018473 | |||
| 303 | Ga0105243_10000533 | |||
| 304 | Ga0105242_10001850 | |||
| 305 | Ga0105242_10365551 | |||
| 306 | Ga0105249_10029380 | |||
| 307 | Ga0105239_10010987 | |||
| 308 | Ga0105239_10024923 | |||
| 309 | Ga0105246_10004396 | |||
| 310 | Ga0157323_1001302 | |||
| 311 | Ga0157370_10073057 | |||
| 312 | Ga0157378_10004124 | |||
| 313 | Ga0157372_10150358 | |||
| 314 | Ga0157372_10256606 | |||
| 315 | Ga0157377_10007451 | |||
| 316 | Ga0157379_10012698 | |||
| 317 | Ga0209147_100054 | |||
| 318 | Ga0209147_100382 | |||
| 319 | Ga0209673_1004114 | |||
| 320 | Ga0209676_1001687 | |||
| 321 | Ga0207426_1005812 | |||
| 322 | Ga0207655_1004727 | |||
| 323 | Ga0207713_1001545 | |||
| 324 | Ga0207710_10075522 | |||
| 325 | Ga0207688_10005332 | |||
| 326 | Ga0207680_10077497 | |||
| 327 | Ga0207645_10033830 | |||
| 328 | Ga0207643_10059426 | |||
| 329 | Ga0207705_10000818 | |||
| 330 | Ga0207705_10083151 | |||
| 331 | Ga0207684_10000698 | |||
| 332 | Ga0207684_10017031 | |||
| 333 | Ga0207693_10230992 | |||
| 334 | Ga0207652_10098703 | |||
| 335 | Ga0207646_10004060 | |||
| 336 | Ga0207646_10192836 | |||
| 337 | Ga0207687_10092371 | |||
| 338 | Ga0207687_10107698 | |||
| 339 | Ga0207700_10002005 | |||
| 340 | Ga0207644_10001172 | |||
| 341 | Ga0207706_10035637 | |||
| 342 | Ga0207686_10195798 | |||
| 343 | Ga0207669_10063594 | |||
| 344 | Ga0207691_10043277 | |||
| 345 | Ga0207667_10004454 | |||
| 346 | Ga0207651_10097890 | |||
| 347 | Ga0207640_10033447 | |||
| 348 | Ga0207677_10029199 | |||
| 349 | Ga0207703_10003432 | |||
| 350 | Ga0207708_10051236 | |||
| 351 | Ga0207641_10000653 | |||
| 352 | Ga0207676_10049823 | |||
| 353 | Ga0207676_10170997 | |||
| 354 | Ga0207674_10097146 | |||
| 355 | Ga0207675_100010081 | |||
| 356 | Ga0209973_1001031 | |||
| 357 | Ga0268266_10026468 | |||
| 358 | Ga0268265_10034054 | |||
| 359 | Ga0268264_10012511 | |||
| 360 | Ga0265327_10040071 | |||
| 361 | Ga0307513_10002547 | |||
| 362 | Ga0316575_10041325 | |||
| 363 | Ga0316576_10081941 | |||
| 364 | Ga0307416_100345171 | |||
| 365 | Ga0307416_100403124 | |||
| 366 | Ga0395905_0186810 | |||
| 367 | Ga0436365_1823034 | |||
| 368 | Ga0466972_0011492 | |||
| 369 | Ga0466965_0000589 | |||
| 370 | Ga0466963_0113912 | |||
| 371 | Ga0453684_0000575 | |||
| 372 | Ga0466960_0000203 | |||
| 373 | Ga0466967_0152449 | |||
| 374 | Ga0466967_0363727 | |||
| 375 | Ga0495650_0066477 | |||
| 376 | Ga0495664_0027079 | |||
| 377 | Ga0495594_0040909 | |||
| 378 | Ga0495618_0035416 | |||
| 379 | Ga0495618_0046212 | |||
| 380 | Ga0495640_0105378 | |||
| 381 | Ga0495667_0004002 | |||
| 382 | Ga0495634_0036171 | |||
| 383 | Ga0495634_0037320 | |||
| 384 | Ga0495599_0045644 | |||
| 385 | Ga0495600_0014901 | |||
| 386 | Ga0495674_0006132 | |||
| 387 | Ga0496100_0001431 | |||
| 388 | Ga0496100_0003206 | |||
| 389 | Ga0496101_0037701 | |||
| 390 | Ga0496102_0000157 | |||
| 391 | Ga0496102_0154669 | |||
| 392 | Ga0496103_0000106 | |||
| 393 | Ga0496103_0002963 | |||
| 394 | Ga0496104_0008327 | |||
| 395 | Ga0496104_0040453 | |||
| 396 | Ga0496105_0000623 | |||
| 397 | Ga0496107_0002676 | |||
| 398 | Ga0496108_0002836 | |||
| 399 | Ga0496110_0125501 | |||
| 400 | Ga0496111_0024745 | |||
| 401 | Ga0496111_0112685 | |||
| 402 | Ga0496112_0011561 | |||
| 403 | Ga0496113_0005061 | |||
| 404 | Ga0496115_0004272 | |||
| 405 | Ga0496116_0000101 | |||
| 406 | Ga0496116_0007801 | |||
| 407 | Ga0496117_0000364 | |||
| 408 | Ga0496118_0000069 | |||
| 409 | Ga0496118_0057381 | |||
| 410 | Ga0496119_0000777 | |||
| 411 | Ga0496119_0003139 | |||
| 412 | Ga0496120_0004724 | |||
| 413 | Ga0496120_0053137 | |||
| 414 | Ga0496121_0022456 | |||
| 415 | Ga0496122_0025722 | |||
| 416 | Ga0496123_0108998 | |||
| 417 | Ga0496124_0066585 | |||
| 418 | Ga0496125_0007663 | |||
| 419 | Ga0496125_0032147 | |||
| 420 | Ga0496126_0000372 | |||
| 421 | Ga0501042_0108463 | |||
| 422 | Ga0501069_0027841 | |||
| 423 | Ga0501071_0305321 | |||
| 424 | Ga0501079_0156663 | |||
| 425 | Ga0501081_0066382 | |||
| 426 | Ga0501044_0364803 | |||
| 427 | nmdc:mga08y16_50570_c1 | |||
| 428 | Ga0495619_0005523 | |||
| 429 | Ga0501084_0312204 | |||
| 430 | Ga0530510_0004904 | |||
| 431 | 2511177910 | |||
| 432 | 2512638366 | |||
| 433 | 2558911914 | |||
| 434 | 2644720231 | |||
| 435 | 2644726689 | |||
| 436 | 2676199444 | |||
| 437 | 2689960380 | |||
| 438 | 2745166003 | |||
| 439 | 2774844022 | |||
| 440 | 2808869946 | |||
| 441 | 2816510502 | |||
| 442 | 2817620794 | |||
| 443 | 2819570556 | |||
| 444 | 2819711274 | |||
| 445 | 2842886167 | |||
| 446 | 2857463959 | |||
| 447 | 2857471940 | |||
| 448 | 2857594257 | |||
| 449 | 2857609560 | |||
| 450 | 2870785201 | |||
| 451 | 2904528581 | |||
| 452 | 2915359267 | |||
| 453 | 2915599683 | |||
| 454 | 2915610118 | |||
| 455 | 2919148212 | |||
| 456 | 2919522021 | |||
| 457 | 2919725155 | |||
| 458 | 2928098449 | |||
| 459 | 2929007879 | |||
| 460 | 2929184840 | |||
| 461 | 2936362841 | |||
| 462 | 2956899637 | |||
| 463 | 2960321145 | |||
| 464 | 2960378394 | |||
| 465 | 2977255729 | |||
| 466 | 3006829474 | |||
| 467 | 3006986662 | |||
| 468 | 8022894195 | |||
| 469 | 8022918694 | |||
| 470 | 8054474651 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1gd9-assembly1.cif.gz_B | crystall structure of pyrococcus protein-a1 | 0.9767 | 6 | 380 |
| 5wmi-assembly1.cif.gz_A-2 | arabidopsis thaliana prephenate aminotransferase mutant- t84v | 0.9623 | 2 | 379 |
| 5wmk-assembly1.cif.gz_A-2 | arabidopsis thaliana prephenate aminotransferase double mutant- t84v k169v | 0.962 | 3 | 379 |
| 5wml-assembly1.cif.gz_B | arabidopsis thaliana prephenate aminotransferase mutant- k306a | 0.9614 | 3 | 379 |
| 6f77-assembly3.cif.gz_F | crystal structure of the prephenate aminotransferase from rhizobium meliloti | 0.9565 | 4 | 379 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1djuB01 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.991 | 281 | 377 | 3.90.1150.10 |
| 1gd9A02 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9714 | 59 | 278 | 3.40.640.10 |
| 1xi9D01 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9713 | 281 | 380 | 3.90.1150.10 |
| 1o4sA01 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9679 | 284 | 378 | 3.90.1150.10 |
| 1j32B02 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9656 | 59 | 278 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3B8U1D6-F1-model_v4 | Aminotransferase (EC 2.6.1.-) | 0.9849 | 4 | 380 |
GO:0006520
GO:0008483 GO:0009058 GO:0030170 |
| AF-A0A355S489-F1-model_v4 | Aminotransferase (EC 2.6.1.-) | 0.983 | 4 | 381 |
GO:0006520
GO:0008483 GO:0009058 GO:0030170 |
| AF-A0A1C6J0V3-F1-model_v4 | Aminotransferase (EC 2.6.1.-) | 0.9813 | 3 | 383 |
GO:0006520
GO:0008483 GO:0009058 GO:0030170 |
| AF-X1N704-F1-model_v4 | Aminotransferase class I/classII large domain-containing protein | 0.9808 | 110 | 376 |
GO:0006520
GO:0008483 GO:0009058 GO:0030170 |
| AF-A0A523X1V1-F1-model_v4 | Aminotransferase (EC 2.6.1.-) | 0.9769 | 3 | 379 |
GO:0006520
GO:0008483 GO:0009058 GO:0030170 |