F347580

General Info

Members Datasets Scaffolds Average Seq Length
234 174 468 178

Family's Representative Sequence

Representative Sequence 3300054114|Ga0501084_0195049|Ga0501084_0195049_861_1514
Length 217
Sequence LFRHVVIATTFAAWWGSEERARPARGARERHVTADRFEAFVEEYQDMVYGTAVRLLGNPADAEDMAQTVFLKAFERFDEIGTSPAAPGWLKTVTTNLCLNHLSRYRSRWRFFSELGAADQDDSGHAKHVDALIARGGAAGTATVEAELMSAADAERLEQALHALPDHQRVPIVLFHFEDKSYVEIASLLGVSLAKVKTDIHRGREALRRVLQASHAS

Samples

Sample ID Description Type Environment
1 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
41 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
42 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
64 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
65 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
66 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
67 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
68 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
90 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
91 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
92 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
93 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
94 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
95 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
105 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
106 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
107 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
108 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
109 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
110 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
111 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
112 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
113 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
114 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
122 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
123 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
124 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
125 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
131 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
132 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
133 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
134 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
135 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
136 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
137 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
138 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
159 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
160 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
164 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
173 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.11
Nodule 0
Rhizoplane 1.28
Rhizosphere 83.33
Stem 0
Stem Tuber 0
Unclassified 23.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501084_0195049 3300054114 Bacteria 1709
2 Ga0065712_10116151 3300005290 Unclassified 1740
3 Ga0065712_10411291 3300005290 Bacteria 717
4 Ga0065715_10454536 3300005293 Unclassified 822
5 Ga0065707_10038789 3300005295 Unclassified 907
6 Ga0070690_100047149 3300005330 Bacteria 2741
7 Ga0070680_100030323 3300005336 Unclassified 4345
8 Ga0070660_100557597 3300005339 Unclassified 956
9 Ga0070689_100001643 3300005340 Bacteria 14305
10 Ga0070689_100775841 3300005340 Bacteria 841
11 Ga0070669_100371468 3300005353 Unclassified 1165
12 Ga0070675_100003480 3300005354 Bacteria 11942
13 Ga0070675_100263375 3300005354 Bacteria 1511
14 Ga0070688_100038189 3300005365 Bacteria 2930
15 Ga0070659_100076970 3300005366 Unclassified 2660
16 Ga0070714_100509530 3300005435 Bacteria 1148
17 Ga0070713_100774721 3300005436 Unclassified 919
18 Ga0070710_10217355 3300005437 Bacteria 1214
19 Ga0070710_10264534 3300005437 Unclassified 1110
20 Ga0070711_100188125 3300005439 Bacteria 1585
21 Ga0070705_100723104 3300005440 Unclassified 784
22 Ga0070708_100094008 3300005445 Bacteria 2735
23 Ga0070708_100536662 3300005445 Bacteria 1104
24 Ga0070708_100545272 3300005445 Bacteria 1094
25 Ga0070662_101327882 3300005457 Unclassified 619
26 Ga0070681_10195641 3300005458 Unclassified 1941
27 Ga0070706_100000343 3300005467 Bacteria 56046
28 Ga0070707_100252966 3300005468 Bacteria 1715
29 Ga0070698_100285402 3300005471 Bacteria 1582
30 Ga0070699_100054630 3300005518 Bacteria 3457
31 Ga0070697_100110874 3300005536 Bacteria 2286
32 Ga0070686_100314419 3300005544 Bacteria 1166
33 Ga0070693_100375110 3300005547 Unclassified 980
34 Ga0070665_100355851 3300005548 Bacteria 1470
35 Ga0068857_101122179 3300005577 Unclassified 760
36 Ga0070702_100268591 3300005615 Bacteria 1165
37 Ga0068859_100134406 3300005617 Unclassified 2545
38 Ga0068859_100343865 3300005617 Bacteria 1586
39 Ga0068864_100875601 3300005618 Bacteria 886
40 Ga0068861_100486349 3300005719 Bacteria 1113
41 Ga0068861_101193647 3300005719 Bacteria 735
42 Ga0068863_100182909 3300005841 Bacteria 2012
43 Ga0068858_100009507 3300005842 Bacteria 9275
44 Ga0068862_100424857 3300005844 Bacteria 1248
45 Ga0081455_10191503 3300005937 Bacteria 1539
46 Ga0081539_10003158 3300005985 Bacteria 20902
47 Ga0075365_10009461 3300006038 Bacteria 5604
48 Ga0075365_10575213 3300006038 Bacteria 797
49 Ga0075363_100049246 3300006048 Bacteria 2243
50 Ga0075364_10015520 3300006051 Bacteria 4726
51 Ga0075364_10110290 3300006051 Bacteria 1836
52 Ga0075362_10001810 3300006177 Bacteria 6981
53 Ga0075367_10006332 3300006178 Bacteria 5969
54 Ga0075367_10026798 3300006178 Bacteria 3272
55 Ga0075367_10048335 3300006178 Bacteria 2505
56 Ga0075366_10010737 3300006195 Bacteria 5148
57 Ga0075366_10162171 3300006195 Bacteria 1355
58 Ga0097621_100215813 3300006237 Bacteria 1670
59 Ga0075370_10043099 3300006353 Bacteria 2550
60 Ga0068871_100654046 3300006358 Bacteria 960
61 Ga0075428_100008359 3300006844 Bacteria 11476
62 Ga0075430_100001798 3300006846 Bacteria 17536
63 Ga0075433_10077489 3300006852 Bacteria 2928
64 Ga0097620_100134408 3300006931 Unclassified 2545
65 Ga0097620_100343840 3300006931 Bacteria 1586
66 Ga0111539_10145481 3300009094 Bacteria 2775
67 Ga0111539_10232135 3300009094 Bacteria 2148
68 Ga0111539_10714947 3300009094 Bacteria 1166
69 Ga0105247_10012392 3300009101 Bacteria 5120
70 Ga0114129_10064770 3300009147 Bacteria 5101
71 Ga0114129_10358518 3300009147 Bacteria 1930
72 Ga0105248_10407709 3300009177 Bacteria 1530
73 Ga0105239_11580174 3300010375 Bacteria 758
74 Ga0157370_10367238 3300013104 Bacteria 1326
75 Ga0157375_10562851 3300013308 Unclassified 1301
76 Ga0157375_11720265 3300013308 Bacteria 743
77 Ga0157380_10439796 3300014326 Bacteria 1249
78 Ga0157377_10021619 3300014745 Bacteria 3386
79 Ga0157379_10017399 3300014968 Bacteria 6332
80 Ga0157376_11379691 3300014969 Bacteria 736
81 Ga0213872_10011674 3300021361 Bacteria 4152
82 Ga0213874_10093112 3300021377 Bacteria 992
83 Ga0213876_10002079 3300021384 Bacteria 11851
84 Ga0213876_10212978 3300021384 Unclassified 1027
85 Ga0213875_10218400 3300021388 Unclassified 898
86 Ga0213871_10042818 3300021441 Unclassified 1220
87 Ga0213871_10058366 3300021441 Bacteria 1070
88 Ga0207710_10056802 3300025900 Unclassified 1767
89 Ga0207645_10087915 3300025907 Bacteria 1997
90 Ga0207684_10006560 3300025910 Bacteria 10594
91 Ga0207707_10006205 3300025912 Bacteria 10442
92 Ga0207707_10229230 3300025912 Unclassified 1616
93 Ga0207660_10119072 3300025917 Unclassified 1998
94 Ga0207657_10614484 3300025919 Bacteria 848
95 Ga0207646_10652887 3300025922 Unclassified 942
96 Ga0207659_10002138 3300025926 Bacteria 11722
97 Ga0207659_10224303 3300025926 Bacteria 1513
98 Ga0207700_10042596 3300025928 Unclassified 3330
99 Ga0207664_10386510 3300025929 Bacteria 1243
100 Ga0207644_10808674 3300025931 Unclassified 784
101 Ga0207690_10302572 3300025932 Unclassified 1252
102 Ga0207670_10010317 3300025936 Bacteria 5374
103 Ga0207670_10570827 3300025936 Bacteria 926
104 Ga0207665_10191566 3300025939 Bacteria 1486
105 Ga0207665_10906479 3300025939 Unclassified 699
106 Ga0207711_10394915 3300025941 Bacteria 1284
107 Ga0207679_10209406 3300025945 Bacteria 1634
108 Ga0207679_10812173 3300025945 Bacteria 853
109 Ga0207703_10118664 3300026035 Unclassified 2268
110 Ga0207639_10852199 3300026041 Bacteria 851
111 Ga0207641_10204826 3300026088 Bacteria 1821
112 Ga0207676_11179243 3300026095 Unclassified 759
113 Ga0207683_10360424 3300026121 Bacteria 1335
114 Ga0207683_10436000 3300026121 Unclassified 1207
115 Ga0265319_1000253 3300028563 Bacteria 40339
116 Ga0265318_10001010 3300028577 Bacteria 17963
117 Ga0265322_10013892 3300028654 Bacteria 2331
118 Ga0265328_10012950 3300031239 Unclassified 3311
119 Ga0265320_10005848 3300031240 Bacteria 7832
120 Ga0265329_10001406 3300031242 Bacteria 11653
121 Ga0265316_10126820 3300031344 Bacteria 1924
122 Ga0307408_100020190 3300031548 Bacteria 4493
123 Ga0307408_100136963 3300031548 Bacteria 1917
124 Ga0307408_100702173 3300031548 Bacteria 909
125 Ga0265313_10054416 3300031595 Bacteria 1900
126 Ga0265314_10000079 3300031711 Bacteria 144215
127 Ga0265314_10018036 3300031711 Bacteria 5518
128 Ga0307405_10095332 3300031731 Bacteria 1981
129 Ga0307413_10518743 3300031824 Bacteria 960
130 Ga0307412_10917028 3300031911 Bacteria 769
131 Ga0307409_100121214 3300031995 Bacteria 2215
132 Ga0307409_100815085 3300031995 Bacteria 942
133 Ga0307409_101069414 3300031995 Bacteria 827
134 Ga0307416_100231336 3300032002 Bacteria 1782
135 Ga0307414_11092326 3300032004 Bacteria 736
136 Ga0307411_10034817 3300032005 Bacteria 3138
137 Ga0307411_10303835 3300032005 Bacteria 1281
138 Ga0307415_100035774 3300032126 Unclassified 3247
139 Ga0307415_100450807 3300032126 Bacteria 1112
140 Ga0373926_0086868 3300035083 Bacteria 1161
141 Ga0373934_0109432 3300035086 Unclassified 1120
142 Ga0373923_0359131 3300035111 Bacteria 697
143 Ga0373943_0024037 3300035170 Unclassified 2839
144 Ga0373931_0090590 3300035691 Unclassified 1703
145 Ga0373935_0460274 3300035692 Bacteria 920
146 Ga0373927_0067529 3300035695 Unclassified 2314
147 Ga0373947_0097572 3300035725 Bacteria 1842
148 Ga0373947_0117527 3300035725 Bacteria 1687
149 Ga0373937_0127402 3300036401 Unclassified 2376
150 Ga0373925_0004167 3300037068 Bacteria 10971
151 Ga0373925_0055326 3300037068 Bacteria 2970
152 Ga0436364_1039642 3300037853 Bacteria 2772
153 Ga0436365_0115412 3300039437 Unclassified 3573
154 Ga0436365_1087299 3300039437 Unclassified 2416
155 Ga0436360_0332478 3300039438 Bacteria 1351
156 Ga0436360_0348531 3300039438 Bacteria 1719
157 Ga0436360_0525957 3300039438 Bacteria 4585
158 Ga0436360_0834203 3300039438 Unclassified 4080
159 Ga0436360_0944385 3300039438 Bacteria 2155
160 Ga0436360_1080330 3300039438 Bacteria 3244
161 Ga0436361_0075227 3300039447 Bacteria 7076
162 Ga0436361_0298332 3300039447 Unclassified 923
163 Ga0436361_0556728 3300039447 Bacteria 2008
164 Ga0436361_0689077 3300039447 Unclassified 968
165 Ga0436361_0901289 3300039447 Bacteria 2401
166 Ga0436361_0990682 3300039447 Bacteria 1596
167 Ga0436363_1703550 3300039450 Unclassified 2983
168 Ga0436362_1003137 3300039453 Unclassified 1909
169 Ga0436362_1138829 3300039453 Bacteria 2232
170 Ga0451853_1144811 3300041512 Bacteria 1272
171 Ga0451853_1290685 3300041512 Unclassified 687
172 Ga0439431_0011087 3300041997 Bacteria 2055
173 Ga0439462_0054822 3300042015 Bacteria 1075
174 Ga0451577_0219485 3300042876 Bacteria 1718
175 Ga0453683_0546826 3300044673 Bacteria 753
176 Ga0453684_0180754 3300044712 Bacteria 2476
177 Ga0453684_1422394 3300044712 Bacteria 718
178 Ga0451576_0140929 3300045051 Bacteria 2514
179 Ga0451576_0474380 3300045051 Bacteria 1314
180 Ga0495651_0411537 3300046462 Bacteria 881
181 Ga0495594_0511257 3300046499 Unclassified 682
182 Ga0495628_0363397 3300046516 Bacteria 1062
183 Ga0495630_0165458 3300046517 Bacteria 1684
184 Ga0495643_0008245 3300046522 Bacteria 6618
185 Ga0495635_0101729 3300046663 Bacteria 1964
186 Ga0495659_0147085 3300046664 Bacteria 944
187 Ga0495658_0540679 3300046683 Bacteria 746
188 Ga0495670_0377444 3300046691 Bacteria 765
189 Ga0495674_0091819 3300047319 Bacteria 2593
190 Ga0496105_0046179 3300048908 Bacteria 3595
191 Ga0496106_0655073 3300048909 Unclassified 839
192 Ga0496112_0554461 3300048915 Unclassified 1083
193 Ga0501031_0283733 3300049568 Bacteria 1074
194 Ga0501034_0003154 3300049571 Bacteria 18965
195 Ga0501034_0090594 3300049571 Unclassified 3056
196 Ga0501039_0102037 3300049575 Bacteria 2239
197 Ga0501043_0960285 3300049579 Unclassified 610
198 Ga0501047_0059568 3300049581 Bacteria 3686
199 Ga0501048_0427921 3300049582 Bacteria 947
200 Ga0501069_0061325 3300049585 Unclassified 2100
201 Ga0501071_0298783 3300049587 Bacteria 1220
202 Ga0501072_0022522 3300049588 Bacteria 4887
203 Ga0501075_0496768 3300049591 Bacteria 931
204 Ga0501076_0329107 3300049592 Bacteria 1253
205 Ga0501076_0707177 3300049592 Unclassified 832
206 Ga0501216_020201 3300049660 Unclassified 1162
207 Ga0501079_0303227 3300049741 Bacteria 1250
208 Ga0501080_0384677 3300049742 Bacteria 1264
209 Ga0501083_0227905 3300049744 Bacteria 1214
210 nmdc:mga03683_6706_c1 3300050489 Bacteria 3958
211 nmdc:mga03n38_44565_c1 3300050490 Bacteria 1949
212 nmdc:mga00v17_593263_c1 3300050491 Bacteria 715
213 nmdc:mga00v17_73254_c1 3300050491 Bacteria 2127
214 nmdc:mga0yw44_336522_c1 3300050492 Bacteria 1015
215 nmdc:mga0yw44_529605_c1 3300050492 Bacteria 800
216 nmdc:mga0yw44_574304_c1 3300050492 Bacteria 766
217 nmdc:mga0k408_13595_c1 3300050493 Bacteria 4468
218 nmdc:mga06z11_15479_c1 3300050494 Bacteria 3406
219 nmdc:mga06z11_38502_c1 3300050494 Bacteria 2375
220 nmdc:mga06z11_569217_c1 3300050494 Bacteria 688
221 nmdc:mga06z11_8600_c1 3300050494 Bacteria 4267
222 nmdc:mga04h51_14420_c1 3300050495 Bacteria 2258
223 nmdc:mga07m45_11880_c1 3300050496 Bacteria 4586
224 nmdc:mga05p37_93532_c1 3300050507 Unclassified 3704
225 nmdc:mga06r32_306157_c1 3300050510 Unclassified 1574
226 nmdc:mga08y16_129748_c1 3300050511 Bacteria 2622
227 nmdc:mga08y16_253954_c1 3300050511 Bacteria 1816
228 nmdc:mga0a205_36145_c2 3300050515 Bacteria 2939
229 Ga0495595_0202736 3300053084 Bacteria 988
230 Ga0495619_0067439 3300053085 Bacteria 2389
231 Ga0501084_0395798 3300054114 Bacteria 1167
232 Ga0590071_046149 3300059421 Bacteria 1052
233 Ga0590077_003129 3300059426 Bacteria 3463
234 Ga0501082_0577033 3300060353 Bacteria 984
235 Ga0501084_0195049
236 Ga0065712_10116151
237 Ga0065712_10411291
238 Ga0065715_10454536
239 Ga0065707_10038789
240 Ga0070690_100047149
241 Ga0070680_100030323
242 Ga0070660_100557597
243 Ga0070689_100001643
244 Ga0070689_100775841
245 Ga0070669_100371468
246 Ga0070675_100003480
247 Ga0070675_100263375
248 Ga0070688_100038189
249 Ga0070659_100076970
250 Ga0070714_100509530
251 Ga0070713_100774721
252 Ga0070710_10217355
253 Ga0070710_10264534
254 Ga0070711_100188125
255 Ga0070705_100723104
256 Ga0070708_100094008
257 Ga0070708_100536662
258 Ga0070708_100545272
259 Ga0070662_101327882
260 Ga0070681_10195641
261 Ga0070706_100000343
262 Ga0070707_100252966
263 Ga0070698_100285402
264 Ga0070699_100054630
265 Ga0070697_100110874
266 Ga0070686_100314419
267 Ga0070693_100375110
268 Ga0070665_100355851
269 Ga0068857_101122179
270 Ga0070702_100268591
271 Ga0068859_100134406
272 Ga0068859_100343865
273 Ga0068864_100875601
274 Ga0068861_100486349
275 Ga0068861_101193647
276 Ga0068863_100182909
277 Ga0068858_100009507
278 Ga0068862_100424857
279 Ga0081455_10191503
280 Ga0081539_10003158
281 Ga0075365_10009461
282 Ga0075365_10575213
283 Ga0075363_100049246
284 Ga0075364_10015520
285 Ga0075364_10110290
286 Ga0075362_10001810
287 Ga0075367_10006332
288 Ga0075367_10026798
289 Ga0075367_10048335
290 Ga0075366_10010737
291 Ga0075366_10162171
292 Ga0097621_100215813
293 Ga0075370_10043099
294 Ga0068871_100654046
295 Ga0075428_100008359
296 Ga0075430_100001798
297 Ga0075433_10077489
298 Ga0097620_100134408
299 Ga0097620_100343840
300 Ga0111539_10145481
301 Ga0111539_10232135
302 Ga0111539_10714947
303 Ga0105247_10012392
304 Ga0114129_10064770
305 Ga0114129_10358518
306 Ga0105248_10407709
307 Ga0105239_11580174
308 Ga0157370_10367238
309 Ga0157375_10562851
310 Ga0157375_11720265
311 Ga0157380_10439796
312 Ga0157377_10021619
313 Ga0157379_10017399
314 Ga0157376_11379691
315 Ga0213872_10011674
316 Ga0213874_10093112
317 Ga0213876_10002079
318 Ga0213876_10212978
319 Ga0213875_10218400
320 Ga0213871_10042818
321 Ga0213871_10058366
322 Ga0207710_10056802
323 Ga0207645_10087915
324 Ga0207684_10006560
325 Ga0207707_10006205
326 Ga0207707_10229230
327 Ga0207660_10119072
328 Ga0207657_10614484
329 Ga0207646_10652887
330 Ga0207659_10002138
331 Ga0207659_10224303
332 Ga0207700_10042596
333 Ga0207664_10386510
334 Ga0207644_10808674
335 Ga0207690_10302572
336 Ga0207670_10010317
337 Ga0207670_10570827
338 Ga0207665_10191566
339 Ga0207665_10906479
340 Ga0207711_10394915
341 Ga0207679_10209406
342 Ga0207679_10812173
343 Ga0207703_10118664
344 Ga0207639_10852199
345 Ga0207641_10204826
346 Ga0207676_11179243
347 Ga0207683_10360424
348 Ga0207683_10436000
349 Ga0265319_1000253
350 Ga0265318_10001010
351 Ga0265322_10013892
352 Ga0265328_10012950
353 Ga0265320_10005848
354 Ga0265329_10001406
355 Ga0265316_10126820
356 Ga0307408_100020190
357 Ga0307408_100136963
358 Ga0307408_100702173
359 Ga0265313_10054416
360 Ga0265314_10000079
361 Ga0265314_10018036
362 Ga0307405_10095332
363 Ga0307413_10518743
364 Ga0307412_10917028
365 Ga0307409_100121214
366 Ga0307409_100815085
367 Ga0307409_101069414
368 Ga0307416_100231336
369 Ga0307414_11092326
370 Ga0307411_10034817
371 Ga0307411_10303835
372 Ga0307415_100035774
373 Ga0307415_100450807
374 Ga0373926_0086868
375 Ga0373934_0109432
376 Ga0373923_0359131
377 Ga0373943_0024037
378 Ga0373931_0090590
379 Ga0373935_0460274
380 Ga0373927_0067529
381 Ga0373947_0097572
382 Ga0373947_0117527
383 Ga0373937_0127402
384 Ga0373925_0004167
385 Ga0373925_0055326
386 Ga0436364_1039642
387 Ga0436365_0115412
388 Ga0436365_1087299
389 Ga0436360_0332478
390 Ga0436360_0348531
391 Ga0436360_0525957
392 Ga0436360_0834203
393 Ga0436360_0944385
394 Ga0436360_1080330
395 Ga0436361_0075227
396 Ga0436361_0298332
397 Ga0436361_0556728
398 Ga0436361_0689077
399 Ga0436361_0901289
400 Ga0436361_0990682
401 Ga0436363_1703550
402 Ga0436362_1003137
403 Ga0436362_1138829
404 Ga0451853_1144811
405 Ga0451853_1290685
406 Ga0439431_0011087
407 Ga0439462_0054822
408 Ga0451577_0219485
409 Ga0453683_0546826
410 Ga0453684_0180754
411 Ga0453684_1422394
412 Ga0451576_0140929
413 Ga0451576_0474380
414 Ga0495651_0411537
415 Ga0495594_0511257
416 Ga0495628_0363397
417 Ga0495630_0165458
418 Ga0495643_0008245
419 Ga0495635_0101729
420 Ga0495659_0147085
421 Ga0495658_0540679
422 Ga0495670_0377444
423 Ga0495674_0091819
424 Ga0496105_0046179
425 Ga0496106_0655073
426 Ga0496112_0554461
427 Ga0501031_0283733
428 Ga0501034_0003154
429 Ga0501034_0090594
430 Ga0501039_0102037
431 Ga0501043_0960285
432 Ga0501047_0059568
433 Ga0501048_0427921
434 Ga0501069_0061325
435 Ga0501071_0298783
436 Ga0501072_0022522
437 Ga0501075_0496768
438 Ga0501076_0329107
439 Ga0501076_0707177
440 Ga0501216_020201
441 Ga0501079_0303227
442 Ga0501080_0384677
443 Ga0501083_0227905
444 nmdc:mga03683_6706_c1
445 nmdc:mga03n38_44565_c1
446 nmdc:mga00v17_593263_c1
447 nmdc:mga00v17_73254_c1
448 nmdc:mga0yw44_336522_c1
449 nmdc:mga0yw44_529605_c1
450 nmdc:mga0yw44_574304_c1
451 nmdc:mga0k408_13595_c1
452 nmdc:mga06z11_15479_c1
453 nmdc:mga06z11_38502_c1
454 nmdc:mga06z11_569217_c1
455 nmdc:mga06z11_8600_c1
456 nmdc:mga04h51_14420_c1
457 nmdc:mga07m45_11880_c1
458 nmdc:mga05p37_93532_c1
459 nmdc:mga06r32_306157_c1
460 nmdc:mga08y16_129748_c1
461 nmdc:mga08y16_253954_c1
462 nmdc:mga0a205_36145_c2
463 Ga0495595_0202736
464 Ga0495619_0067439
465 Ga0501084_0395798
466 Ga0590071_046149
467 Ga0590077_003129
468 Ga0501082_0577033

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04545

Sigma70_r4

Sigma-70, region 4

160

209

0.98

PF08281

Sigma70_r4_2

Sigma-70, region 4

154

207

0.97

PF04542

Sigma70_r2

Sigma-70 region 2

40

109

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2o8x-assembly1.cif.gz_A "crystal structure of the ""-35 element"" promoter recognition domain of mycobacterium tuberculosis sigc" 0.9759 114 170
2o8x-assembly1.cif.gz_B "crystal structure of the ""-35 element"" promoter recognition domain of mycobacterium tuberculosis sigc" 0.9751 114 170
3hug-assembly2.cif.gz_E crystal structure of mycobacterium tuberculosis anti-sigma factor rsla in complex with -35 promoter binding domain of sigl 0.9703 110 176
6jhe-assembly1.cif.gz_A crystal structure of bacillus subtilis sigw domain 4 in complexed with -35 element dna 0.9602 126 174
3vep-assembly4.cif.gz_H crystal structure of sigd4 in complex with its negative regulator rsda 0.9572 118 176
ID Description Score Start End Superfamily
2o8xA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9759 114 170 1.10.10.10
2o8xB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9751 114 170 1.10.10.10
2o8xC00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9701 114 170 1.10.10.10
3hugK00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.962 114 176 1.10.10.10
4go1B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9569 130 168 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7V6ECR0-F1-model_v4 RNA polymerase sigma-70 region 2 domain-containing protein 0.8252 1 103 GO:0006352
GO:0016987
AF-A0A7V6ECR0-F1-model_v4 RNA polymerase sigma-70 region 2 domain-containing protein 0.8173 1 103 GO:0006352
GO:0016987
AF-A0A845DIM4-F1-model_v4 RNA polymerase sigma factor 0.8147 90 176 GO:0003677
GO:0006352
GO:0016987
AF-A0A3D0SPH4-F1-model_v4 deleted 0.7433 78 176
AF-A0A6P0K6M2-F1-model_v4 RNA polymerase sigma factor 0.7373 7 176 GO:0003677
GO:0006352
GO:0016987

Map