F347556

General Info

Members Datasets Scaffolds Average Seq Length
234 180 468 187

Family's Representative Sequence

Representative Sequence 3300050510|nmdc:mga06r32_119503_c1|nmdc:mga06r32_119503_c1_134_751
Length 205
Sequence VPYVWDDEFVRTGKGVSGAVMAKLIYASNMSLDGYTEDERGAFDWAPPDDGVFAFITEVMRSADTYLYGRRMYETMAVWETDSSLAARTDLTAEYANVWQAADKVVYSSSLAAPSTANTRLERHFDPGAVHDLKAAASRDLLVGGPNLAAQALGAGLVDELQLLVWPVVLGGRKAALPTDMRADLELLDEHRFSNGVVHLRYRFV

Samples

Sample ID Description Type Environment
1 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
65 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
66 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
98 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
99 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
100 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
103 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
113 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
121 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
122 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
123 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
124 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
125 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
128 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
129 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
133 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
138 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
139 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
140 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
144 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
149 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
152 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
153 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
159 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
160 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
167 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
168 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
172 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
173 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
174 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
175 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
176 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
177 2858868258 Micromonospora sp. MH33 Isolate Unclassified
178 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
179 2920879853 Kocuria salina CV6 Isolate Unclassified
180 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.58
Metatranscriptomes 1.28
Isolates 2.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.43
Nodule 0
Rhizoplane 6.84
Rhizosphere 88.03
Stem 0
Stem Tuber 0
Unclassified 7.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga06r32_119503_c1 3300050510 Bacteria 2599
2 Ga0070658_10256794 3300005327 Bacteria 1483
3 Ga0070670_100013862 3300005331 Bacteria 6913
4 Ga0068869_100144498 3300005334 Bacteria 1840
5 Ga0068869_100218544 3300005334 Bacteria 1509
6 Ga0068869_100854150 3300005334 Bacteria 785
7 Ga0070666_10736079 3300005335 Bacteria 724
8 Ga0070680_100003888 3300005336 Bacteria 11167
9 Ga0070682_100003784 3300005337 Bacteria 8412
10 Ga0068868_100003429 3300005338 Bacteria 11037
11 Ga0068868_100250260 3300005338 Bacteria 1491
12 Ga0070691_10002952 3300005341 Bacteria 7622
13 Ga0070661_100020196 3300005344 Bacteria 4748
14 Ga0070692_10020048 3300005345 Bacteria 3236
15 Ga0070668_100664968 3300005347 Bacteria 916
16 Ga0070675_100101028 3300005354 Bacteria 2429
17 Ga0070675_100189613 3300005354 Unclassified 1781
18 Ga0070671_100002958 3300005355 Bacteria 13215
19 Ga0070673_100563471 3300005364 Bacteria 1036
20 Ga0070659_100146580 3300005366 Bacteria 1923
21 Ga0070714_100005816 3300005435 Bacteria 9455
22 Ga0070701_10277402 3300005438 Unclassified 1022
23 Ga0070700_100262480 3300005441 Bacteria 1244
24 Ga0070708_100451402 3300005445 Bacteria 1213
25 Ga0070678_100019641 3300005456 Bacteria 4413
26 Ga0070662_100378501 3300005457 Bacteria 1165
27 Ga0070681_10176571 3300005458 Bacteria 2058
28 Ga0070698_100000913 3300005471 Bacteria 32306
29 Ga0070684_100749049 3300005535 Unclassified 912
30 Ga0070672_100105716 3300005543 Bacteria 2289
31 Ga0070665_100272940 3300005548 Bacteria 1693
32 Ga0068857_101331417 3300005577 Bacteria 697
33 Ga0068852_100578706 3300005616 Bacteria 1125
34 Ga0068859_100022994 3300005617 Bacteria 6251
35 Ga0068859_100106975 3300005617 Bacteria 2857
36 Ga0068864_101205729 3300005618 Bacteria 755
37 Ga0068870_10000634 3300005840 Bacteria 13424
38 Ga0068863_100057191 3300005841 Bacteria 3691
39 Ga0068863_100254216 3300005841 Bacteria 1698
40 Ga0068858_100081813 3300005842 Bacteria 3001
41 Ga0068860_100005625 3300005843 Bacteria 12663
42 Ga0068860_100225448 3300005843 Bacteria 1820
43 Ga0068862_100250461 3300005844 Bacteria 1614
44 Ga0075364_10150819 3300006051 Bacteria 1567
45 Ga0097621_100087863 3300006237 Bacteria 2597
46 Ga0068871_100086902 3300006358 Bacteria 2599
47 Ga0075433_10647222 3300006852 Bacteria 927
48 Ga0075434_100018511 3300006871 Bacteria 6730
49 Ga0075436_100004040 3300006914 Bacteria 10062
50 Ga0097620_100022994 3300006931 Bacteria 6251
51 Ga0097620_100106976 3300006931 Bacteria 2857
52 Ga0075435_100003477 3300007076 Bacteria 10682
53 Ga0105240_10420885 3300009093 Bacteria 1501
54 Ga0111539_10020457 3300009094 Bacteria 8150
55 Ga0111539_10976626 3300009094 Bacteria 985
56 Ga0111539_11043037 3300009094 Bacteria 950
57 Ga0105245_10041505 3300009098 Bacteria 4101
58 Ga0105247_10489008 3300009101 Bacteria 894
59 Ga0114129_10386704 3300009147 Unclassified 1846
60 Ga0105241_10036653 3300009174 Bacteria 3691
61 Ga0105241_10286453 3300009174 Bacteria 1409
62 Ga0105237_10107906 3300009545 Bacteria 2776
63 Ga0105239_10146293 3300010375 Bacteria 2636
64 Ga0105239_10427387 3300010375 Bacteria 1501
65 Ga0105239_11580639 3300010375 Bacteria 758
66 Ga0105246_10295036 3300011119 Bacteria 1306
67 Ga0157369_11404685 3300013105 Bacteria 711
68 Ga0157374_10066049 3300013296 Bacteria 3399
69 Ga0157374_10096714 3300013296 Bacteria 2824
70 Ga0157374_10717426 3300013296 Bacteria 1013
71 Ga0163162_10487082 3300013306 Bacteria 1364
72 Ga0157372_11206051 3300013307 Bacteria 874
73 Ga0157375_10151083 3300013308 Bacteria 2458
74 Ga0163163_10700927 3300014325 Bacteria 1076
75 Ga0157380_10694234 3300014326 Unclassified 1022
76 Ga0157376_10164020 3300014969 Bacteria 2017
77 Ga0206356_10870301 3300020070 Bacteria 849
78 Ga0206354_10255502 3300020081 Bacteria 1200
79 Ga0213876_10022801 3300021384 Bacteria 3308
80 Ga0213875_10016405 3300021388 Bacteria 3591
81 Ga0224712_10245105 3300022467 Bacteria 826
82 Ga0207710_10257626 3300025900 Bacteria 874
83 Ga0207688_10008657 3300025901 Bacteria 5538
84 Ga0207647_10209370 3300025904 Bacteria 1126
85 Ga0207643_10000130 3300025908 Bacteria 50988
86 Ga0207707_10050359 3300025912 Bacteria 3628
87 Ga0207695_11091462 3300025913 Bacteria 678
88 Ga0207660_10099235 3300025917 Bacteria 2173
89 Ga0207649_10007945 3300025920 Bacteria 5775
90 Ga0207652_10034724 3300025921 Bacteria 4251
91 Ga0207652_10049465 3300025921 Bacteria 3598
92 Ga0207652_10703025 3300025921 Unclassified 902
93 Ga0207694_10516105 3300025924 Bacteria 1001
94 Ga0207650_10003411 3300025925 Bacteria 10932
95 Ga0207687_10025782 3300025927 Bacteria 3935
96 Ga0207687_10427800 3300025927 Bacteria 1094
97 Ga0207690_10920975 3300025932 Bacteria 725
98 Ga0207691_10318613 3300025940 Bacteria 1333
99 Ga0207711_10265823 3300025941 Bacteria 1577
100 Ga0207661_10454749 3300025944 Bacteria 1166
101 Ga0207679_10001330 3300025945 Bacteria 15622
102 Ga0207679_10853485 3300025945 Bacteria 832
103 Ga0207667_10051737 3300025949 Bacteria 4328
104 Ga0207651_10316496 3300025960 Bacteria 1303
105 Ga0207677_10140828 3300026023 Bacteria 1846
106 Ga0207678_10003570 3300026067 Bacteria 13984
107 Ga0207708_10006977 3300026075 Bacteria 8352
108 Ga0207708_10178052 3300026075 Bacteria 1687
109 Ga0207702_10000076 3300026078 Bacteria 112300
110 Ga0207702_10002017 3300026078 Bacteria 19674
111 Ga0207702_10005926 3300026078 Bacteria 10618
112 Ga0207676_10001972 3300026095 Bacteria 14945
113 Ga0207674_10320143 3300026116 Bacteria 1500
114 Ga0207674_11300461 3300026116 Bacteria 697
115 Ga0207683_10000254 3300026121 Bacteria 47482
116 Ga0207698_10028558 3300026142 Bacteria 3980
117 Ga0207428_10004704 3300027907 Bacteria 12917
118 Ga0268266_10177466 3300028379 Bacteria 1937
119 Ga0268264_10060443 3300028381 Bacteria 3176
120 Ga0268264_10649759 3300028381 Bacteria 1044
121 Ga0268264_10958049 3300028381 Bacteria 861
122 Ga0265334_10010681 3300028573 Unclassified 3874
123 Ga0265334_10050836 3300028573 Bacteria 1591
124 Ga0265338_10002455 3300028800 Bacteria 27733
125 Ga0265338_10015487 3300028800 Bacteria 8369
126 Ga0265338_10058559 3300028800 Bacteria 3399
127 Ga0265332_10004580 3300031238 Bacteria 6473
128 Ga0265325_10014458 3300031241 Bacteria 4459
129 Ga0307513_10020608 3300031456 Bacteria 7814
130 Ga0265313_10000053 3300031595 Bacteria 110362
131 Ga0307508_10301413 3300031616 Bacteria 1195
132 Ga0265342_10023101 3300031712 Bacteria 3941
133 Ga0307405_10554454 3300031731 Unclassified 931
134 Ga0307413_10021765 3300031824 Bacteria 3441
135 Ga0307413_10435430 3300031824 Bacteria 1037
136 Ga0307410_10453807 3300031852 Bacteria 1046
137 Ga0307409_100127421 3300031995 Bacteria 2168
138 Ga0307409_100240930 3300031995 Bacteria 1646
139 Ga0307409_101333688 3300031995 Bacteria 743
140 Ga0307416_100688787 3300032002 Bacteria 1110
141 Ga0307416_100848889 3300032002 Bacteria 1011
142 Ga0307411_10098053 3300032005 Bacteria 2065
143 Ga0307415_100138430 3300032126 Bacteria 1855
144 Ga0373946_0234866 3300035171 Unclassified 890
145 Ga0373947_0189899 3300035725 Bacteria 1340
146 Ga0395900_0051252 3300037418 Bacteria 4252
147 Ga0395898_0402856 3300037466 Bacteria 1304
148 Ga0395898_0988721 3300037466 Bacteria 777
149 Ga0395905_1183535 3300037471 Unclassified 668
150 Ga0436364_0911431 3300037853 Bacteria 7252
151 Ga0395901_0142670 3300038443 Bacteria 2517
152 Ga0395901_0259803 3300038443 Bacteria 1808
153 Ga0395901_0559247 3300038443 Bacteria 1158
154 Ga0436365_1682393 3300039437 Unclassified 1186
155 Ga0436360_1027219 3300039438 Unclassified 883
156 Ga0451800_0914016 3300041459 Bacteria 669
157 Ga0451841_0068082 3300041498 Bacteria 1144
158 Ga0439448_0137342 3300042005 Bacteria 845
159 Ga0439458_0007826 3300042157 Bacteria 2379
160 Ga0466963_0155301 3300044694 Bacteria 1590
161 Ga0466963_0705867 3300044694 Bacteria 712
162 Ga0453684_0113121 3300044712 Bacteria 3293
163 Ga0453684_0713552 3300044712 Bacteria 1089
164 Ga0495584_0273459 3300046491 Bacteria 859
165 Ga0495608_0240337 3300046511 Bacteria 1132
166 Ga0495618_0319475 3300046514 Bacteria 962
167 Ga0495628_0044457 3300046516 Bacteria 3533
168 Ga0495630_0074886 3300046517 Bacteria 2550
169 Ga0495630_0600871 3300046517 Bacteria 843
170 Ga0495665_0047233 3300046531 Bacteria 2284
171 Ga0495634_0262677 3300046642 Unclassified 1053
172 Ga0495635_0398105 3300046663 Bacteria 915
173 Ga0495658_0076359 3300046683 Bacteria 1958
174 Ga0495658_0158091 3300046683 Bacteria 1396
175 Ga0495613_0172267 3300046689 Bacteria 1536
176 Ga0495624_0487037 3300046690 Unclassified 738
177 Ga0495676_0100545 3300047321 Unclassified 2141
178 Ga0495680_0610849 3300047322 Bacteria 729
179 Ga0495684_0102705 3300047471 Bacteria 2161
180 Ga0496101_0268742 3300048904 Bacteria 1331
181 Ga0496104_0404038 3300048907 Bacteria 1278
182 Ga0496105_0019774 3300048908 Bacteria 5433
183 Ga0496106_0123738 3300048909 Bacteria 2023
184 Ga0496107_0611165 3300048910 Bacteria 805
185 Ga0496108_0084152 3300048911 Bacteria 2699
186 Ga0496108_0166071 3300048911 Bacteria 1908
187 Ga0496109_1116492 3300048912 Bacteria 725
188 Ga0496110_0009940 3300048913 Bacteria 7714
189 Ga0496111_0058593 3300048914 Bacteria 2788
190 Ga0496112_0013785 3300048915 Bacteria 7476
191 Ga0496112_0076081 3300048915 Bacteria 3320
192 Ga0496112_0277224 3300048915 Bacteria 1624
193 Ga0496113_0448780 3300048916 Bacteria 1036
194 Ga0496114_1264301 3300048917 Bacteria 625
195 Ga0501031_0622210 3300049568 Bacteria 694
196 Ga0501069_0081756 3300049585 Bacteria 1820
197 Ga0501069_0135839 3300049585 Bacteria 1409
198 Ga0501070_0007726 3300049586 Bacteria 9117
199 Ga0501071_0164450 3300049587 Bacteria 1660
200 Ga0501071_0704613 3300049587 Bacteria 777
201 Ga0501072_0004299 3300049588 Bacteria 10817
202 Ga0501072_0095310 3300049588 Bacteria 2365
203 Ga0501075_0551423 3300049591 Bacteria 880
204 Ga0501076_0204302 3300049592 Bacteria 1614
205 Ga0501077_0107009 3300049593 Bacteria 1772
206 Ga0501077_0506987 3300049593 Bacteria 774
207 Ga0501079_0054641 3300049741 Bacteria 3080
208 Ga0501079_0840749 3300049741 Unclassified 723
209 Ga0501080_0001431 3300049742 Bacteria 20048
210 Ga0501080_0082313 3300049742 Bacteria 2990
211 Ga0501080_0155300 3300049742 Bacteria 2114
212 Ga0501081_0397606 3300049743 Bacteria 1020
213 Ga0501081_0539813 3300049743 Bacteria 871
214 Ga0501083_0038239 3300049744 Bacteria 3263
215 Ga0501083_0071574 3300049744 Bacteria 2305
216 Ga0501044_0685737 3300049823 Bacteria 911
217 Ga0501045_0048221 3300049824 Bacteria 3105
218 Ga0501045_0441832 3300049824 Unclassified 967
219 nmdc:mga05p37_230578_c1 3300050507 Bacteria 2231
220 nmdc:mga09592_175330_c1 3300050508 Bacteria 1854
221 nmdc:mga08y16_292406_c1 3300050511 Bacteria 1680
222 nmdc:mga0rr50_642653_c1 3300050513 Bacteria 905
223 nmdc:mga0a205_4896_c1 3300050515 Bacteria 12043
224 Ga0495619_0325302 3300053085 Bacteria 1064
225 Ga0501084_0218848 3300054114 Bacteria 1607
226 Ga0501084_0220796 3300054114 Bacteria 1599
227 Ga0501082_0022978 3300060353 Bacteria 5376
228 Ga0501082_0261971 3300060353 Bacteria 1504
229 Ga0530510_0211994 3300061734 Bacteria 1439
230 2832010244 2832004796 Bacteria 6538017
231 2858874649 2858868258 Bacteria 7683772
232 2866067412 2866065130 Bacteria 6518152
233 2920883843 2920879853 Bacteria 4216831
234 8056215629 8056207758 Bacteria 8639239
235 nmdc:mga06r32_119503_c1
236 Ga0070658_10256794
237 Ga0070670_100013862
238 Ga0068869_100144498
239 Ga0068869_100218544
240 Ga0068869_100854150
241 Ga0070666_10736079
242 Ga0070680_100003888
243 Ga0070682_100003784
244 Ga0068868_100003429
245 Ga0068868_100250260
246 Ga0070691_10002952
247 Ga0070661_100020196
248 Ga0070692_10020048
249 Ga0070668_100664968
250 Ga0070675_100101028
251 Ga0070675_100189613
252 Ga0070671_100002958
253 Ga0070673_100563471
254 Ga0070659_100146580
255 Ga0070714_100005816
256 Ga0070701_10277402
257 Ga0070700_100262480
258 Ga0070708_100451402
259 Ga0070678_100019641
260 Ga0070662_100378501
261 Ga0070681_10176571
262 Ga0070698_100000913
263 Ga0070684_100749049
264 Ga0070672_100105716
265 Ga0070665_100272940
266 Ga0068857_101331417
267 Ga0068852_100578706
268 Ga0068859_100022994
269 Ga0068859_100106975
270 Ga0068864_101205729
271 Ga0068870_10000634
272 Ga0068863_100057191
273 Ga0068863_100254216
274 Ga0068858_100081813
275 Ga0068860_100005625
276 Ga0068860_100225448
277 Ga0068862_100250461
278 Ga0075364_10150819
279 Ga0097621_100087863
280 Ga0068871_100086902
281 Ga0075433_10647222
282 Ga0075434_100018511
283 Ga0075436_100004040
284 Ga0097620_100022994
285 Ga0097620_100106976
286 Ga0075435_100003477
287 Ga0105240_10420885
288 Ga0111539_10020457
289 Ga0111539_10976626
290 Ga0111539_11043037
291 Ga0105245_10041505
292 Ga0105247_10489008
293 Ga0114129_10386704
294 Ga0105241_10036653
295 Ga0105241_10286453
296 Ga0105237_10107906
297 Ga0105239_10146293
298 Ga0105239_10427387
299 Ga0105239_11580639
300 Ga0105246_10295036
301 Ga0157369_11404685
302 Ga0157374_10066049
303 Ga0157374_10096714
304 Ga0157374_10717426
305 Ga0163162_10487082
306 Ga0157372_11206051
307 Ga0157375_10151083
308 Ga0163163_10700927
309 Ga0157380_10694234
310 Ga0157376_10164020
311 Ga0206356_10870301
312 Ga0206354_10255502
313 Ga0213876_10022801
314 Ga0213875_10016405
315 Ga0224712_10245105
316 Ga0207710_10257626
317 Ga0207688_10008657
318 Ga0207647_10209370
319 Ga0207643_10000130
320 Ga0207707_10050359
321 Ga0207695_11091462
322 Ga0207660_10099235
323 Ga0207649_10007945
324 Ga0207652_10034724
325 Ga0207652_10049465
326 Ga0207652_10703025
327 Ga0207694_10516105
328 Ga0207650_10003411
329 Ga0207687_10025782
330 Ga0207687_10427800
331 Ga0207690_10920975
332 Ga0207691_10318613
333 Ga0207711_10265823
334 Ga0207661_10454749
335 Ga0207679_10001330
336 Ga0207679_10853485
337 Ga0207667_10051737
338 Ga0207651_10316496
339 Ga0207677_10140828
340 Ga0207678_10003570
341 Ga0207708_10006977
342 Ga0207708_10178052
343 Ga0207702_10000076
344 Ga0207702_10002017
345 Ga0207702_10005926
346 Ga0207676_10001972
347 Ga0207674_10320143
348 Ga0207674_11300461
349 Ga0207683_10000254
350 Ga0207698_10028558
351 Ga0207428_10004704
352 Ga0268266_10177466
353 Ga0268264_10060443
354 Ga0268264_10649759
355 Ga0268264_10958049
356 Ga0265334_10010681
357 Ga0265334_10050836
358 Ga0265338_10002455
359 Ga0265338_10015487
360 Ga0265338_10058559
361 Ga0265332_10004580
362 Ga0265325_10014458
363 Ga0307513_10020608
364 Ga0265313_10000053
365 Ga0307508_10301413
366 Ga0265342_10023101
367 Ga0307405_10554454
368 Ga0307413_10021765
369 Ga0307413_10435430
370 Ga0307410_10453807
371 Ga0307409_100127421
372 Ga0307409_100240930
373 Ga0307409_101333688
374 Ga0307416_100688787
375 Ga0307416_100848889
376 Ga0307411_10098053
377 Ga0307415_100138430
378 Ga0373946_0234866
379 Ga0373947_0189899
380 Ga0395900_0051252
381 Ga0395898_0402856
382 Ga0395898_0988721
383 Ga0395905_1183535
384 Ga0436364_0911431
385 Ga0395901_0142670
386 Ga0395901_0259803
387 Ga0395901_0559247
388 Ga0436365_1682393
389 Ga0436360_1027219
390 Ga0451800_0914016
391 Ga0451841_0068082
392 Ga0439448_0137342
393 Ga0439458_0007826
394 Ga0466963_0155301
395 Ga0466963_0705867
396 Ga0453684_0113121
397 Ga0453684_0713552
398 Ga0495584_0273459
399 Ga0495608_0240337
400 Ga0495618_0319475
401 Ga0495628_0044457
402 Ga0495630_0074886
403 Ga0495630_0600871
404 Ga0495665_0047233
405 Ga0495634_0262677
406 Ga0495635_0398105
407 Ga0495658_0076359
408 Ga0495658_0158091
409 Ga0495613_0172267
410 Ga0495624_0487037
411 Ga0495676_0100545
412 Ga0495680_0610849
413 Ga0495684_0102705
414 Ga0496101_0268742
415 Ga0496104_0404038
416 Ga0496105_0019774
417 Ga0496106_0123738
418 Ga0496107_0611165
419 Ga0496108_0084152
420 Ga0496108_0166071
421 Ga0496109_1116492
422 Ga0496110_0009940
423 Ga0496111_0058593
424 Ga0496112_0013785
425 Ga0496112_0076081
426 Ga0496112_0277224
427 Ga0496113_0448780
428 Ga0496114_1264301
429 Ga0501031_0622210
430 Ga0501069_0081756
431 Ga0501069_0135839
432 Ga0501070_0007726
433 Ga0501071_0164450
434 Ga0501071_0704613
435 Ga0501072_0004299
436 Ga0501072_0095310
437 Ga0501075_0551423
438 Ga0501076_0204302
439 Ga0501077_0107009
440 Ga0501077_0506987
441 Ga0501079_0054641
442 Ga0501079_0840749
443 Ga0501080_0001431
444 Ga0501080_0082313
445 Ga0501080_0155300
446 Ga0501081_0397606
447 Ga0501081_0539813
448 Ga0501083_0038239
449 Ga0501083_0071574
450 Ga0501044_0685737
451 Ga0501045_0048221
452 Ga0501045_0441832
453 nmdc:mga05p37_230578_c1
454 nmdc:mga09592_175330_c1
455 nmdc:mga08y16_292406_c1
456 nmdc:mga0rr50_642653_c1
457 nmdc:mga0a205_4896_c1
458 Ga0495619_0325302
459 Ga0501084_0218848
460 Ga0501084_0220796
461 Ga0501082_0022978
462 Ga0501082_0261971
463 Ga0530510_0211994
464 2832010244
465 2858874649
466 2866067412
467 2920883843
468 8056215629

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

22

199

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ky8-assembly1.cif.gz_B crystal structure of putative riboflavin biosynthesis protein (yp_001092907.1) from shewanella sp. pv-4 at 2.12 a resolution 0.8258 3 185
7xh2-assembly1.cif.gz_A dihydrofolate reductase-like protein sach in safracin biosynthesis 0.816 1 184
3ky8-assembly1.cif.gz_B crystal structure of putative riboflavin biosynthesis protein (yp_001092907.1) from shewanella sp. pv-4 at 2.12 a resolution 0.813 3 185
7xh2-assembly1.cif.gz_A dihydrofolate reductase-like protein sach in safracin biosynthesis 0.8117 1 184
1d1g-assembly1.cif.gz_B dihydrofolate reductase from thermotoga maritima 0.8086 2 185
ID Description Score Start End Superfamily
3ky8B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8096 3 183 3.40.430.10
3ky8B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8008 3 183 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8002 1 185 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7959 1 185 3.40.430.10
2gd9B01 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7954 3 182 3.40.430.10
ID Description Score Start End GO Terms
AF-A0A2S8WG96-F1-model_v4 Deaminase 0.9888 1 184 GO:0008703
GO:0009231
AF-A0A3P5WHC4-F1-model_v4 Bacterial bifunctional deaminase-reductase C-terminal domain-containing protein 0.9885 27 185 GO:0008703
GO:0009231
AF-A0A536R3V8-F1-model_v4 Deaminase 0.9883 1 164 GO:0008703
GO:0009231
AF-A0A838TVV3-F1-model_v4 Dihydrofolate reductase family protein 0.9881 1 183 GO:0008703
GO:0009231
AF-A0A2N3YZ04-F1-model_v4 deleted 0.9877 1 185

Map