F347375

General Info

Members Datasets Scaffolds Average Seq Length
234 168 468 581

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0018389|Ga0451576_0018389_1620_3464
Length 614
Sequence VIDILPVSLGGIFLFGLGPQQILFLLILIVAILLFVTEWIRPDVVAVMIVIALYATRVLDAKDALSGFSSEPAIVVAGIFVLSASLHVTGVSDTIGGWIGRLAGNSLTRAIAVIMPCVAVLSAFTHHVTTTAMMVPITLDVSRERKIPAAKLLMPMSFAASLGTAITIIGAPAFLIASNTLQQSGHGGLGIFSIAPIGLALSAVGTVFVLLIGRHLLPSHEAEEDRSSHFRLEDYLTEIVVTEKSPLVDQTVADLKENYHFDVLGVLRGGRRLPTPYKQQALQKDDVLIVRITPEELVAIREEPNIELRPIREYGETKDEKKVPDDADAPEDQFVQAVVAPRSELIGRTLSKINFQRRYGAVVVGLWRKDGWLDQEISKVRLRANDVLVLEGDPESLATVANDPAFLMLVPFHGDSKPRGRAWAAGLIMLATILLAAFNLMTIEMAALTGAVAVVLARCISIRQAYSSIDARIFVFIAGAIPLGVAMQKTGTATLLAGWLQNAIGGWPERLILLALFAVVAVITQFMSDSATTAVFAPVALALAQALGRAPEPYVVTVAMASVVAFLTPIGHHGNLLVYGPGRYKFGDFVKVGTPLTVLAAVVVVMIAPMLWRG

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 3300001432 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
6 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
7 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
8 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
9 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
10 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
71 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
72 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
75 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
107 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
115 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
116 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
117 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
118 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
119 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
120 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
121 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
122 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
123 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
124 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
125 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
126 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
127 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
143 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
144 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
147 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
148 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
149 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
156 2643221559 Lysobacter sp. Root559 Isolate Unclassified
157 2643221573 Lysobacter sp. Root604 Isolate Unclassified
158 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
159 2643221586 Lysobacter sp. Root667 Isolate Unclassified
160 2643221612 Lysobacter sp. Root76 Isolate Unclassified
161 2643221720 Lysobacter sp. Root916 Isolate Unclassified
162 2643221727 Lysobacter sp. Root96 Isolate Unclassified
163 2643221728 Lysobacter sp. Root983 Isolate Unclassified
164 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
165 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
166 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
167 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
168 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.02
Metatranscriptomes 0.43
Isolates 5.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.84
Nodule 0
Rhizoplane 0.43
Rhizosphere 86.75
Stem 0
Stem Tuber 0
Unclassified 1.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_0018389 3300045051 Bacteria 7662
2 JGI24034J14986_100072 3300001432 Bacteria 4183
3 JGI24741J21665_1000418 3300001915 Bacteria 12893
4 JGI24741J21665_1002642 3300001915 Bacteria 4580
5 JGI24740J21852_10002258 3300001979 Bacteria 8789
6 JGI24748J21848_1000010 3300002074 Bacteria 166979
7 JGI24034J26672_10000001 3300002239 Bacteria 1118280
8 JGI25152J39213_1000033 3300002773 Bacteria 95187
9 JGI25150J39212_1000216 3300002774 Bacteria 31473
10 JGI25150J39212_1000522 3300002774 Bacteria 15710
11 JGI25151J46595_10000142 3300003187 Bacteria 95187
12 JGI25153J46596_10000107 3300003215 Bacteria 95187
13 rootH1_10192886 3300003323 Bacteria 5520
14 Ga0055524_1007134 3300003775 Bacteria 4785
15 Ga0055531_10019312 3300003794 Bacteria 2764
16 Ga0065704_10071642 3300005289 Bacteria 10404
17 Ga0070683_100029634 3300005329 Bacteria 4958
18 Ga0070680_100010725 3300005336 Bacteria 7074
19 Ga0070680_100016316 3300005336 Bacteria 5844
20 Ga0070689_100044672 3300005340 Bacteria 3409
21 Ga0070691_10002561 3300005341 Bacteria 8107
22 Ga0070691_10032639 3300005341 Bacteria 2447
23 Ga0070661_100085716 3300005344 Bacteria 2328
24 Ga0070692_10000255 3300005345 Bacteria 14714
25 Ga0070675_100015601 3300005354 Bacteria 6011
26 Ga0070671_100025824 3300005355 Bacteria 4823
27 Ga0070671_100055822 3300005355 Bacteria 3286
28 Ga0070659_100071289 3300005366 Unclassified 2762
29 Ga0070703_10000015 3300005406 Bacteria 87420
30 Ga0070700_100005323 3300005441 Bacteria 6803
31 Ga0070694_100005118 3300005444 Bacteria 7905
32 Ga0070662_100017422 3300005457 Bacteria 4844
33 Ga0070681_10020102 3300005458 Bacteria 6692
34 Ga0070679_100016783 3300005530 Bacteria 7077
35 Ga0068853_100038525 3300005539 Bacteria 4072
36 Ga0068853_100092297 3300005539 Bacteria 2663
37 Ga0070665_100050621 3300005548 Bacteria 4168
38 Ga0070664_100008276 3300005564 Bacteria 8413
39 Ga0068857_100008367 3300005577 Bacteria 8939
40 Ga0068856_100014422 3300005614 Bacteria 7636
41 Ga0070702_100034619 3300005615 Bacteria 2785
42 Ga0070702_100077051 3300005615 Bacteria 1986
43 Ga0068852_100035987 3300005616 Bacteria 4137
44 Ga0068859_100003569 3300005617 Bacteria 15854
45 Ga0068859_100109804 3300005617 Bacteria 2820
46 Ga0068864_100077823 3300005618 Unclassified 2901
47 Ga0068866_10005035 3300005718 Bacteria 5440
48 Ga0068851_10009193 3300005834 Bacteria 4588
49 Ga0068858_100000005 3300005842 Bacteria 305830
50 Ga0068862_100027468 3300005844 Bacteria 4790
51 Ga0081539_10000066 3300005985 Bacteria 246391
52 Ga0075428_100000420 3300006844 Bacteria 42195
53 Ga0075428_100189847 3300006844 Bacteria 2222
54 Ga0075430_100006680 3300006846 Bacteria 9731
55 Ga0075430_100008494 3300006846 Bacteria 8676
56 Ga0075430_100015262 3300006846 Bacteria 6540
57 Ga0075431_100019801 3300006847 Bacteria 6869
58 Ga0075431_100118121 3300006847 Bacteria 2736
59 Ga0075433_10039486 3300006852 Bacteria 4082
60 Ga0075429_100011121 3300006880 Bacteria 7790
61 Ga0075429_100013439 3300006880 Bacteria 7100
62 Ga0075429_100061860 3300006880 Bacteria 3262
63 Ga0097620_100003568 3300006931 Bacteria 15854
64 Ga0097620_100109804 3300006931 Bacteria 2820
65 Ga0105240_10292249 3300009093 Bacteria 1867
66 Ga0111539_10022812 3300009094 Bacteria 7688
67 Ga0111539_10080421 3300009094 Bacteria 3833
68 Ga0111539_10168975 3300009094 Bacteria 2555
69 Ga0105247_10000002 3300009101 Bacteria 724587
70 Ga0114129_10010034 3300009147 Bacteria 13501
71 Ga0114129_10211930 3300009147 Bacteria 2618
72 Ga0105243_10001062 3300009148 Bacteria 25128
73 Ga0105242_10000554 3300009176 Bacteria 29570
74 Ga0105248_10136695 3300009177 Bacteria 2765
75 Ga0105238_10006571 3300009551 Bacteria 11581
76 Ga0105249_10000030 3300009553 Bacteria 221992
77 Ga0157370_10004177 3300013104 Bacteria 16709
78 Ga0157369_10003325 3300013105 Bacteria 19100
79 Ga0157378_10000003 3300013297 Bacteria 203725
80 Ga0157378_10005802 3300013297 Bacteria 10820
81 Ga0163162_10000002 3300013306 Bacteria 717331
82 Ga0157372_10093893 3300013307 Bacteria 3415
83 Ga0157375_10001002 3300013308 Bacteria 24391
84 Ga0157380_10030794 3300014326 Bacteria 4112
85 Ga0157379_10093369 3300014968 Unclassified 2700
86 Ga0163161_10077874 3300017792 Bacteria 2436
87 Ga0206356_11382778 3300020070 Bacteria 3629
88 Ga0207672_1000173 3300025223 Bacteria 8911
89 Ga0207425_1000064 3300025245 Bacteria 129075
90 Ga0209129_1000101 3300025258 Bacteria 161931
91 Ga0209676_1002625 3300025292 Bacteria 12266
92 Ga0209025_1000048 3300025294 Bacteria 335574
93 Ga0209025_1016808 3300025294 Bacteria 4279
94 Ga0209025_1018149 3300025294 Bacteria 4013
95 Ga0209758_1000056 3300025297 Bacteria 335574
96 Ga0209257_1000180 3300025304 Bacteria 158090
97 Ga0207656_10012197 3300025321 Bacteria 3263
98 Ga0207653_10000007 3300025885 Bacteria 198873
99 Ga0207710_10000002 3300025900 Bacteria 1251998
100 Ga0207647_10001866 3300025904 Bacteria 16136
101 Ga0207705_10000974 3300025909 Bacteria 23391
102 Ga0207705_10003500 3300025909 Bacteria 11954
103 Ga0207705_10019254 3300025909 Bacteria 4881
104 Ga0207707_10000168 3300025912 Bacteria 68834
105 Ga0207707_10000215 3300025912 Bacteria 61846
106 Ga0207707_10000559 3300025912 Bacteria 37705
107 Ga0207707_10001617 3300025912 Bacteria 20762
108 Ga0207695_10004240 3300025913 Bacteria 19704
109 Ga0207695_10007730 3300025913 Bacteria 13618
110 Ga0207695_10065547 3300025913 Bacteria 3735
111 Ga0207660_10004750 3300025917 Bacteria 8845
112 Ga0207660_10005499 3300025917 Bacteria 8228
113 Ga0207660_10011998 3300025917 Bacteria 5658
114 Ga0207660_10013844 3300025917 Bacteria 5293
115 Ga0207657_10001427 3300025919 Bacteria 25498
116 Ga0207657_10001910 3300025919 Bacteria 22494
117 Ga0207657_10004359 3300025919 Bacteria 14988
118 Ga0207652_10000158 3300025921 Bacteria 73781
119 Ga0207652_10001679 3300025921 Bacteria 19383
120 Ga0207652_10023438 3300025921 Bacteria 5114
121 Ga0207659_10019106 3300025926 Bacteria 4503
122 Ga0207644_10027143 3300025931 Bacteria 3954
123 Ga0207644_10057661 3300025931 Bacteria 2804
124 Ga0207690_10000387 3300025932 Bacteria 29064
125 Ga0207690_10113888 3300025932 Bacteria 1952
126 Ga0207706_10027997 3300025933 Bacteria 5036
127 Ga0207686_10000132 3300025934 Bacteria 58994
128 Ga0207686_10000436 3300025934 Bacteria 28156
129 Ga0207709_10002653 3300025935 Bacteria 11110
130 Ga0207661_10020049 3300025944 Bacteria 4993
131 Ga0207661_10021517 3300025944 Bacteria 4832
132 Ga0207679_10043407 3300025945 Bacteria 3237
133 Ga0207667_10004148 3300025949 Bacteria 17810
134 Ga0207667_10048384 3300025949 Bacteria 4496
135 Ga0207712_10000041 3300025961 Bacteria 180000
136 Ga0207640_10002034 3300025981 Bacteria 10931
137 Ga0207640_10010310 3300025981 Bacteria 5260
138 Ga0207703_10000150 3300026035 Bacteria 80047
139 Ga0207639_10041422 3300026041 Bacteria 3445
140 Ga0207678_10001953 3300026067 Bacteria 18797
141 Ga0207678_10002114 3300026067 Bacteria 17990
142 Ga0207678_10019991 3300026067 Bacteria 5885
143 Ga0207702_10006822 3300026078 Bacteria 9794
144 Ga0207674_10007915 3300026116 Bacteria 12343
145 Ga0207683_10097220 3300026121 Bacteria 2626
146 Ga0209974_10016063 3300027876 Bacteria 2486
147 Ga0268266_10019161 3300028379 Bacteria 5827
148 Ga0268265_10022655 3300028380 Bacteria 4416
149 Ga0307516_10006260 3300031730 Bacteria 13990
150 Ga0307413_10001870 3300031824 Bacteria 8314
151 Ga0307406_10001591 3300031901 Bacteria 12494
152 Ga0307412_10013103 3300031911 Bacteria 4851
153 Ga0307414_10013137 3300032004 Bacteria 4921
154 Ga0307414_10051142 3300032004 Bacteria 2866
155 Ga0395900_0071692 3300037418 Unclassified 3562
156 Ga0395900_0085421 3300037418 Bacteria 3243
157 Ga0395905_0001210 3300037471 Bacteria 32198
158 Ga0395905_0002034 3300037471 Bacteria 23113
159 Ga0395901_0011512 3300038443 Bacteria 8965
160 Ga0395901_0032905 3300038443 Bacteria 5349
161 Ga0237819_00401 3300038705 Bacteria 15072
162 Ga0439461_0004491 3300041410 Bacteria 2332
163 Ga0439433_0006666 3300041999 Bacteria 2490
164 Ga0439443_002376 3300042003 Bacteria 2245
165 Ga0450920_000842 3300042122 Bacteria 4969
166 Ga0450923_000280 3300042125 Bacteria 5128
167 Ga0439446_0002977 3300042156 Bacteria 4145
168 Ga0450908_001014 3300042184 Bacteria 5434
169 Ga0439434_0009322 3300042435 Bacteria 2884
170 Ga0439435_0003467 3300042436 Bacteria 3285
171 Ga0439460_0003466 3300042461 Bacteria 3818
172 Ga0495618_0030977 3300046514 Bacteria 3344
173 Ga0495659_0009838 3300046664 Bacteria 3058
174 Ga0495636_0020892 3300047318 Bacteria 2640
175 Ga0496106_0014419 3300048909 Bacteria 5839
176 Ga0496122_0018354 3300048925 Bacteria 6472
177 Ga0496123_0013930 3300048926 Bacteria 6700
178 Ga0496126_0066995 3300048929 Bacteria 3209
179 Ga0501034_0000127 3300049571 Bacteria 142181
180 Ga0501034_0001820 3300049571 Bacteria 27107
181 Ga0501038_0018463 3300049574 Bacteria 6297
182 Ga0501039_0022328 3300049575 Bacteria 4858
183 Ga0501039_0050772 3300049575 Bacteria 3209
184 Ga0501040_0013891 3300049576 Bacteria 5301
185 Ga0501046_0095951 3300049580 Bacteria 2278
186 Ga0501067_0018470 3300049583 Bacteria 3863
187 Ga0501070_0000102 3300049586 Bacteria 74839
188 Ga0501070_0027410 3300049586 Bacteria 4779
189 Ga0501071_0041782 3300049587 Bacteria 3284
190 Ga0501072_0006445 3300049588 Bacteria 8935
191 Ga0501072_0011715 3300049588 Bacteria 6699
192 Ga0501073_0006558 3300049589 Bacteria 8660
193 Ga0501075_0012728 3300049591 Bacteria 5986
194 Ga0501075_0032797 3300049591 Bacteria 3861
195 Ga0501075_0034580 3300049591 Bacteria 3763
196 Ga0501075_0060506 3300049591 Bacteria 2854
197 Ga0501076_0005626 3300049592 Bacteria 9030
198 Ga0501076_0021509 3300049592 Bacteria 4949
199 Ga0501079_0003022 3300049741 Bacteria 12302
200 Ga0501079_0049196 3300049741 Bacteria 3253
201 Ga0501080_0003890 3300049742 Bacteria 13219
202 Ga0501081_0014674 3300049743 Bacteria 5170
203 Ga0501081_0017069 3300049743 Bacteria 4799
204 Ga0501081_0063119 3300049743 Bacteria 2571
205 Ga0501045_0013217 3300049824 Bacteria 5824
206 nmdc:mga05p37_10378_c1 3300050507 Bacteria 11057
207 nmdc:mga05p37_226694_c1 3300050507 Bacteria 2253
208 nmdc:mga09592_3039_c1 3300050508 Bacteria 13609
209 nmdc:mga09592_58659_c1 3300050508 Bacteria 3255
210 nmdc:mga0qj67_27796_c1 3300050509 Bacteria 4386
211 nmdc:mga0qj67_35751_c1 3300050509 Bacteria 3885
212 nmdc:mga08y16_14312_c1 3300050511 Bacteria 8350
213 nmdc:mga08y16_51602_c1 3300050511 Bacteria 4303
214 Ga0500616_0000019 3300053153 Bacteria 549964
215 Ga0501084_0011112 3300054114 Bacteria 7456
216 Ga0501084_0017066 3300054114 Bacteria 6031
217 Ga0501084_0036188 3300054114 Bacteria 4124
218 Ga0501084_0053572 3300054114 Bacteria 3375
219 Ga0501082_0084533 3300060353 Bacteria 2737
220 Ga0501082_0090607 3300060353 Bacteria 2640
221 Ga0530510_0024656 3300061734 Bacteria 4295
222 2643815707 2643221559 Bacteria 4424915
223 2643878184 2643221573 Bacteria 4784121
224 2643913182 2643221581 Bacteria 3893603
225 2643940789 2643221586 Bacteria 4446529
226 2644080165 2643221612 Bacteria 4361984
227 2644659488 2643221720 Bacteria 4694283
228 2644695761 2643221727 Bacteria 4415595
229 2644700762 2643221728 Bacteria 4797149
230 2895499223 2895498888 Bacteria 5283788
231 2895512244 2895511927 Bacteria 6802080
232 2895522255 2895522137 Bacteria 3284416
233 2895527302 2895525241 Bacteria 3388457
234 2923517791 2923516293 Bacteria 3716336
235 Ga0451576_0018389
236 JGI24034J14986_100072
237 JGI24741J21665_1000418
238 JGI24741J21665_1002642
239 JGI24740J21852_10002258
240 JGI24748J21848_1000010
241 JGI24034J26672_10000001
242 JGI25152J39213_1000033
243 JGI25150J39212_1000216
244 JGI25150J39212_1000522
245 JGI25151J46595_10000142
246 JGI25153J46596_10000107
247 rootH1_10192886
248 Ga0055524_1007134
249 Ga0055531_10019312
250 Ga0065704_10071642
251 Ga0070683_100029634
252 Ga0070680_100010725
253 Ga0070680_100016316
254 Ga0070689_100044672
255 Ga0070691_10002561
256 Ga0070691_10032639
257 Ga0070661_100085716
258 Ga0070692_10000255
259 Ga0070675_100015601
260 Ga0070671_100025824
261 Ga0070671_100055822
262 Ga0070659_100071289
263 Ga0070703_10000015
264 Ga0070700_100005323
265 Ga0070694_100005118
266 Ga0070662_100017422
267 Ga0070681_10020102
268 Ga0070679_100016783
269 Ga0068853_100038525
270 Ga0068853_100092297
271 Ga0070665_100050621
272 Ga0070664_100008276
273 Ga0068857_100008367
274 Ga0068856_100014422
275 Ga0070702_100034619
276 Ga0070702_100077051
277 Ga0068852_100035987
278 Ga0068859_100003569
279 Ga0068859_100109804
280 Ga0068864_100077823
281 Ga0068866_10005035
282 Ga0068851_10009193
283 Ga0068858_100000005
284 Ga0068862_100027468
285 Ga0081539_10000066
286 Ga0075428_100000420
287 Ga0075428_100189847
288 Ga0075430_100006680
289 Ga0075430_100008494
290 Ga0075430_100015262
291 Ga0075431_100019801
292 Ga0075431_100118121
293 Ga0075433_10039486
294 Ga0075429_100011121
295 Ga0075429_100013439
296 Ga0075429_100061860
297 Ga0097620_100003568
298 Ga0097620_100109804
299 Ga0105240_10292249
300 Ga0111539_10022812
301 Ga0111539_10080421
302 Ga0111539_10168975
303 Ga0105247_10000002
304 Ga0114129_10010034
305 Ga0114129_10211930
306 Ga0105243_10001062
307 Ga0105242_10000554
308 Ga0105248_10136695
309 Ga0105238_10006571
310 Ga0105249_10000030
311 Ga0157370_10004177
312 Ga0157369_10003325
313 Ga0157378_10000003
314 Ga0157378_10005802
315 Ga0163162_10000002
316 Ga0157372_10093893
317 Ga0157375_10001002
318 Ga0157380_10030794
319 Ga0157379_10093369
320 Ga0163161_10077874
321 Ga0206356_11382778
322 Ga0207672_1000173
323 Ga0207425_1000064
324 Ga0209129_1000101
325 Ga0209676_1002625
326 Ga0209025_1000048
327 Ga0209025_1016808
328 Ga0209025_1018149
329 Ga0209758_1000056
330 Ga0209257_1000180
331 Ga0207656_10012197
332 Ga0207653_10000007
333 Ga0207710_10000002
334 Ga0207647_10001866
335 Ga0207705_10000974
336 Ga0207705_10003500
337 Ga0207705_10019254
338 Ga0207707_10000168
339 Ga0207707_10000215
340 Ga0207707_10000559
341 Ga0207707_10001617
342 Ga0207695_10004240
343 Ga0207695_10007730
344 Ga0207695_10065547
345 Ga0207660_10004750
346 Ga0207660_10005499
347 Ga0207660_10011998
348 Ga0207660_10013844
349 Ga0207657_10001427
350 Ga0207657_10001910
351 Ga0207657_10004359
352 Ga0207652_10000158
353 Ga0207652_10001679
354 Ga0207652_10023438
355 Ga0207659_10019106
356 Ga0207644_10027143
357 Ga0207644_10057661
358 Ga0207690_10000387
359 Ga0207690_10113888
360 Ga0207706_10027997
361 Ga0207686_10000132
362 Ga0207686_10000436
363 Ga0207709_10002653
364 Ga0207661_10020049
365 Ga0207661_10021517
366 Ga0207679_10043407
367 Ga0207667_10004148
368 Ga0207667_10048384
369 Ga0207712_10000041
370 Ga0207640_10002034
371 Ga0207640_10010310
372 Ga0207703_10000150
373 Ga0207639_10041422
374 Ga0207678_10001953
375 Ga0207678_10002114
376 Ga0207678_10019991
377 Ga0207702_10006822
378 Ga0207674_10007915
379 Ga0207683_10097220
380 Ga0209974_10016063
381 Ga0268266_10019161
382 Ga0268265_10022655
383 Ga0307516_10006260
384 Ga0307413_10001870
385 Ga0307406_10001591
386 Ga0307412_10013103
387 Ga0307414_10013137
388 Ga0307414_10051142
389 Ga0395900_0071692
390 Ga0395900_0085421
391 Ga0395905_0001210
392 Ga0395905_0002034
393 Ga0395901_0011512
394 Ga0395901_0032905
395 Ga0237819_00401
396 Ga0439461_0004491
397 Ga0439433_0006666
398 Ga0439443_002376
399 Ga0450920_000842
400 Ga0450923_000280
401 Ga0439446_0002977
402 Ga0450908_001014
403 Ga0439434_0009322
404 Ga0439435_0003467
405 Ga0439460_0003466
406 Ga0495618_0030977
407 Ga0495659_0009838
408 Ga0495636_0020892
409 Ga0496106_0014419
410 Ga0496122_0018354
411 Ga0496123_0013930
412 Ga0496126_0066995
413 Ga0501034_0000127
414 Ga0501034_0001820
415 Ga0501038_0018463
416 Ga0501039_0022328
417 Ga0501039_0050772
418 Ga0501040_0013891
419 Ga0501046_0095951
420 Ga0501067_0018470
421 Ga0501070_0000102
422 Ga0501070_0027410
423 Ga0501071_0041782
424 Ga0501072_0006445
425 Ga0501072_0011715
426 Ga0501073_0006558
427 Ga0501075_0012728
428 Ga0501075_0032797
429 Ga0501075_0034580
430 Ga0501075_0060506
431 Ga0501076_0005626
432 Ga0501076_0021509
433 Ga0501079_0003022
434 Ga0501079_0049196
435 Ga0501080_0003890
436 Ga0501081_0014674
437 Ga0501081_0017069
438 Ga0501081_0063119
439 Ga0501045_0013217
440 nmdc:mga05p37_10378_c1
441 nmdc:mga05p37_226694_c1
442 nmdc:mga09592_3039_c1
443 nmdc:mga09592_58659_c1
444 nmdc:mga0qj67_27796_c1
445 nmdc:mga0qj67_35751_c1
446 nmdc:mga08y16_14312_c1
447 nmdc:mga08y16_51602_c1
448 Ga0500616_0000019
449 Ga0501084_0011112
450 Ga0501084_0017066
451 Ga0501084_0036188
452 Ga0501084_0053572
453 Ga0501082_0084533
454 Ga0501082_0090607
455 Ga0530510_0024656
456 2643815707
457 2643878184
458 2643913182
459 2643940789
460 2644080165
461 2644659488
462 2644695761
463 2644700762
464 2895499223
465 2895512244
466 2895522255
467 2895527302
468 2923517791

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03600

CitMHS

Citrate transporter

32

548

0.97

PF02080

TrkA_C

TrkA-C domain

236

304

0.95

PF02080

TrkA_C

TrkA-C domain

334

403

0.94

PF00939

Na_sulph_symp

Sodium:sulfate symporter transmembrane region

426

614

0.84

PF03600

CitMHS

Citrate transporter

503

613

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4f35-assembly2.cif.gz_B crystal structure of a bacterial dicarboxylate/sodium symporter 0.8539 1 602
6okz-assembly2.cif.gz_A structure of vcindy bound to fumarate 0.839 3 602
4f35-assembly1.cif.gz_C crystal structure of a bacterial dicarboxylate/sodium symporter 0.834 2 602
2aef-assembly1.cif.gz_A crystal structures of the mthk rck domain in ca2+ bound form 0.8331 323 391
4f35-assembly1.cif.gz_D crystal structure of a bacterial dicarboxylate/sodium symporter 0.8273 3 602
ID Description Score Start End Superfamily
af_P0AFU2_323_398_3.30.70.1450 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.8806 320 390 3.30.70.1450
2bkpA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.8358 320 389 3.30.70.1450
af_Q58752_261_343_3.30.70.1450 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.8356 320 391 3.30.70.1450
2fy8C03 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.8331 321 391 3.30.70.1450
af_Q57604_260_331_3.30.70.1450 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.8326 325 389 3.30.70.1450
ID Description Score Start End GO Terms
AF-A0A661FZW2-F1-model_v4 SLC13 family permease 0.9612 4 194 GO:0005886
GO:0055085
AF-A0A661FZW2-F1-model_v4 SLC13 family permease 0.9515 4 194 GO:0005886
GO:0055085
AF-W4QYR2-F1-model_v4 Putative transport protein 0.9459 5 202 GO:0005886
GO:0015105
AF-A0A659PBM5-F1-model_v4 SLC13 family permease 0.9423 4 191 GO:0005886
GO:0055085
AF-A0A3C0FCQ0-F1-model_v4 Transporter 0.9261 5 188 GO:0005886
GO:0055085

Map