F347226

General Info

Members Datasets Scaffolds Average Seq Length
234 181 468 244

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10024463|Ga0265338_100244632
Length 283
Sequence MVSAEDPVPFWHNAPVLHFDILAGTHWDSGFMKVIAISGGGQGLGRAIAYHFAALGYAVSFCDTDASAGRETLAALKAKGAGALFQRCDVAQAEEVNAWMARTVKELGVPDVLINNAGIMIRKDVLKLKPEEFSRVIATNLGGAFLCSQAVAKVMAKRGQGGAIINIASTRAFMSEPNTEGYAASKGGIVALTHALAISLSPHRIRVNAISPGWIEVRDWQKASKAVTPHHSKDDREQHPVGRVGIPADIAEACQFLAESAGFMTGQNITIDGGMTVKMIYSE

Samples

Sample ID Description Type Environment
1 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
9 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
78 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
79 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
80 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
85 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
86 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
87 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
88 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
89 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
94 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
95 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
96 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
97 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
98 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
99 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
100 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
101 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
102 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
113 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
114 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
115 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
116 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
117 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
121 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
128 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
129 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
130 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
134 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
135 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
143 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
150 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
151 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
152 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
153 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
154 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
157 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
158 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
159 2643221731 Bacillus sp. Root147 Isolate Unclassified
160 2643221732 Bacillus sp. Root239 Isolate Unclassified
161 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
162 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
163 2842882022 Bacillus sp. R-71893 Isolate Unclassified
164 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
165 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
166 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
167 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
168 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
169 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
170 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
171 2919720352 Priestia megaterium 4340 Isolate Unclassified
172 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
173 2929004312 Priestia megaterium 1104 Isolate Unclassified
174 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
175 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
176 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
177 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
178 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
179 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
180 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
181 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.46
Metatranscriptomes 0.43
Isolates 11.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.68
Nodule 0
Rhizoplane 9.83
Rhizosphere 67.09
Stem 0
Stem Tuber 0
Unclassified 1.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265338_10024463 3300028800 Bacteria 6168
2 JGI25151J46595_10016074 3300003187 Bacteria 3280
3 JGI25165J46597_1000008 3300003214 Bacteria 478603
4 JGI25153J46596_10000320 3300003215 Bacteria 35306
5 rootH1_10011112 3300003316 Bacteria 15845
6 rootH2_10317303 3300003320 Bacteria 1896
7 rootL2_10095634 3300003322 Bacteria 10818
8 Ga0006562J51391_1009884 3300003578 Bacteria 4606
9 Ga0055528_1005052 3300003790 Bacteria 6231
10 Ga0068869_100009349 3300005334 Bacteria 6358
11 Ga0070689_100025425 3300005340 Bacteria 4448
12 Ga0070689_100048006 3300005340 Bacteria 3292
13 Ga0070687_100014079 3300005343 Bacteria 3584
14 Ga0070668_100407046 3300005347 Bacteria 1163
15 Ga0070671_100004428 3300005355 Bacteria 11112
16 Ga0070673_100009813 3300005364 Bacteria 6448
17 Ga0070688_100437061 3300005365 Bacteria 976
18 Ga0070709_10305536 3300005434 Bacteria 1163
19 Ga0070701_10006904 3300005438 Bacteria 4809
20 Ga0070711_100005538 3300005439 Bacteria 7561
21 Ga0070700_100405317 3300005441 Bacteria 1026
22 Ga0070681_10051398 3300005458 Bacteria 4110
23 Ga0070706_100556560 3300005467 Bacteria 1067
24 Ga0070698_100003383 3300005471 Bacteria 17547
25 Ga0070698_100189420 3300005471 Bacteria 1995
26 Ga0068853_100454465 3300005539 Bacteria 1205
27 Ga0070665_100164912 3300005548 Bacteria 2218
28 Ga0070704_100001245 3300005549 Bacteria 13419
29 Ga0070704_100131466 3300005549 Bacteria 1941
30 Ga0068855_100707181 3300005563 Bacteria 1078
31 Ga0068857_100075607 3300005577 Bacteria 3003
32 Ga0068857_100139151 3300005577 Bacteria 2194
33 Ga0070702_100446474 3300005615 Bacteria 937
34 Ga0068860_100460750 3300005843 Bacteria 1265
35 Ga0068862_100463805 3300005844 Bacteria 1196
36 Ga0070717_10194310 3300006028 Bacteria 1774
37 Ga0070717_10459299 3300006028 Bacteria 1148
38 Ga0075365_10225666 3300006038 Bacteria 1314
39 Ga0075368_10000542 3300006042 Bacteria 11339
40 Ga0075364_10007566 3300006051 Bacteria 6457
41 Ga0075367_10001238 3300006178 Bacteria 10745
42 Ga0075428_100080025 3300006844 Bacteria 3566
43 Ga0075428_100195273 3300006844 Bacteria 2189
44 Ga0075430_100459160 3300006846 Bacteria 1051
45 Ga0075431_100104373 3300006847 Bacteria 2925
46 Ga0075431_100500292 3300006847 Bacteria 1207
47 Ga0075429_100000758 3300006880 Bacteria 25393
48 Ga0111539_10033846 3300009094 Bacteria 6201
49 Ga0114129_10022973 3300009147 Bacteria 8847
50 Ga0114129_10478125 3300009147 Bacteria 1630
51 Ga0105241_10413605 3300009174 Bacteria 1185
52 Ga0105237_10668465 3300009545 Bacteria 1045
53 Ga0105239_10169927 3300010375 Bacteria 2437
54 Ga0105246_10402519 3300011119 Bacteria 1137
55 Ga0157380_10262920 3300014326 Bacteria 1568
56 Ga0157377_10114494 3300014745 Bacteria 1626
57 Ga0157379_10124501 3300014968 Bacteria 2319
58 Ga0209147_101996 3300025229 Bacteria 5932
59 Ga0209233_1000006 3300025261 Bacteria 1473685
60 Ga0209673_1001617 3300025273 Bacteria 19648
61 Ga0209025_1024574 3300025294 Bacteria 3103
62 Ga0209758_1000032 3300025297 Bacteria 481623
63 Ga0207655_1086023 3300025728 Bacteria 1120
64 Ga0207655_1095309 3300025728 Bacteria 1038
65 Ga0207713_1004642 3300025735 Bacteria 8869
66 Ga0207699_10150431 3300025906 Bacteria 1540
67 Ga0207707_10134835 3300025912 Bacteria 2159
68 Ga0207663_10186375 3300025916 Bacteria 1486
69 Ga0207662_10026215 3300025918 Bacteria 3361
70 Ga0207700_10396670 3300025928 Bacteria 1209
71 Ga0207644_10016447 3300025931 Bacteria 4977
72 Ga0207709_10242109 3300025935 Bacteria 1313
73 Ga0207670_10031672 3300025936 Bacteria 3392
74 Ga0207667_10101751 3300025949 Bacteria 2964
75 Ga0207651_10084399 3300025960 Bacteria 2300
76 Ga0207658_10420909 3300025986 Bacteria 1178
77 Ga0207703_10617717 3300026035 Bacteria 1026
78 Ga0207639_10159120 3300026041 Bacteria 1901
79 Ga0207708_10194991 3300026075 Bacteria 1614
80 Ga0207708_10435695 3300026075 Bacteria 1089
81 Ga0207674_10070709 3300026116 Bacteria 3509
82 Ga0207674_10706734 3300026116 Bacteria 973
83 Ga0207675_100187755 3300026118 Bacteria 1981
84 Ga0209813_10039578 3300027866 Bacteria 1429
85 Ga0268266_10127655 3300028379 Bacteria 2271
86 Ga0268266_10959917 3300028379 Bacteria 827
87 Ga0268265_10335229 3300028380 Bacteria 1375
88 Ga0268264_10697984 3300028381 Bacteria 1008
89 Ga0265326_10029575 3300028558 Unclassified 1561
90 Ga0265338_10106003 3300028800 Bacteria 2277
91 Ga0373941_0084188 3300035115 Bacteria 1079
92 Ga0373953_0068563 3300035117 Bacteria 1460
93 Ga0373931_0000355 3300035691 Bacteria 18854
94 Ga0395900_0251092 3300037418 Bacteria 1770
95 Ga0395898_0206919 3300037466 Bacteria 1872
96 Ga0395901_0816470 3300038443 Bacteria 920
97 Ga0436360_0971671 3300039438 Unclassified 1570
98 Ga0436361_0667579 3300039447 Bacteria 1762
99 Ga0451577_0050480 3300042876 Bacteria 3713
100 Ga0451577_0156377 3300042876 Bacteria 2052
101 Ga0451577_0187707 3300042876 Bacteria 1864
102 Ga0451577_0321300 3300042876 Bacteria 1404
103 Ga0453683_0000674 3300044673 Bacteria 36279
104 Ga0453683_0019498 3300044673 Bacteria 4342
105 Ga0453683_0075031 3300044673 Bacteria 2117
106 Ga0466966_0081946 3300044684 Bacteria 2008
107 Ga0466963_0272096 3300044694 Bacteria 1190
108 Ga0453684_0000328 3300044712 Bacteria 199181
109 Ga0453684_0037189 3300044712 Bacteria 6685
110 Ga0453684_0041630 3300044712 Bacteria 6208
111 Ga0453684_0053973 3300044712 Bacteria 5240
112 Ga0453684_0102018 3300044712 Bacteria 3509
113 Ga0453684_0139378 3300044712 Bacteria 2899
114 Ga0453684_0556682 3300044712 Bacteria 1262
115 Ga0453684_0822973 3300044712 Bacteria 1000
116 Ga0466959_0356491 3300045049 Bacteria 997
117 Ga0451576_0001668 3300045051 Bacteria 36838
118 Ga0451576_0006067 3300045051 Bacteria 14906
119 Ga0451576_0021735 3300045051 Bacteria 6966
120 Ga0451576_0554574 3300045051 Bacteria 1207
121 Ga0466958_0149894 3300045836 Bacteria 1471
122 Ga0495603_0075758 3300046455 Bacteria 1975
123 Ga0495585_0060302 3300046492 Bacteria 2088
124 Ga0495654_0090467 3300046530 Bacteria 1421
125 Ga0495621_0025778 3300046539 Bacteria 1978
126 Ga0495661_0162012 3300046665 Bacteria 1200
127 Ga0495672_0146492 3300047320 Bacteria 1228
128 Ga0495672_0181947 3300047320 Bacteria 1064
129 Ga0496100_0003825 3300048903 Bacteria 7888
130 Ga0496101_0055383 3300048904 Bacteria 2864
131 Ga0496102_0045934 3300048905 Bacteria 3965
132 Ga0496104_0001882 3300048907 Bacteria 18178
133 Ga0496104_0001884 3300048907 Bacteria 18177
134 Ga0496105_0002086 3300048908 Bacteria 14459
135 Ga0496105_0004721 3300048908 Bacteria 10283
136 Ga0496106_0000693 3300048909 Bacteria 24211
137 Ga0496107_0137388 3300048910 Bacteria 1806
138 Ga0496108_0008202 3300048911 Bacteria 8477
139 Ga0496108_0011919 3300048911 Bacteria 7072
140 Ga0496108_0398299 3300048911 Bacteria 1202
141 Ga0496109_0000858 3300048912 Bacteria 25390
142 Ga0496109_0008308 3300048912 Bacteria 8815
143 Ga0496109_0208393 3300048912 Bacteria 1838
144 Ga0496110_0000710 3300048913 Bacteria 23028
145 Ga0496110_0000911 3300048913 Bacteria 20767
146 Ga0496111_0015305 3300048914 Bacteria 5264
147 Ga0496112_0002515 3300048915 Bacteria 14801
148 Ga0496112_0011450 3300048915 Bacteria 8100
149 Ga0496112_0059656 3300048915 Bacteria 3760
150 Ga0496113_0001125 3300048916 Bacteria 14525
151 Ga0496113_0036499 3300048916 Bacteria 3602
152 Ga0496116_0049352 3300048919 Bacteria 2816
153 Ga0496117_0033773 3300048920 Bacteria 3864
154 Ga0496119_0010656 3300048922 Bacteria 7705
155 Ga0496120_0003437 3300048923 Bacteria 14442
156 Ga0496120_0092046 3300048923 Bacteria 1618
157 Ga0496121_0022886 3300048924 Bacteria 6039
158 Ga0496121_0480871 3300048924 Bacteria 793
159 Ga0496124_0318738 3300048927 Bacteria 1114
160 Ga0496125_0008366 3300048928 Bacteria 10847
161 Ga0496126_0000030 3300048929 Bacteria 386461
162 Ga0496126_0042930 3300048929 Bacteria 4174
163 Ga0501034_0109745 3300049571 Bacteria 2750
164 Ga0501034_0250820 3300049571 Bacteria 1714
165 Ga0501036_0673562 3300049572 Bacteria 856
166 Ga0501039_0545864 3300049575 Bacteria 910
167 Ga0501041_0287677 3300049577 Bacteria 1035
168 Ga0501043_0372251 3300049579 Bacteria 1083
169 Ga0501047_0456781 3300049581 Bacteria 1106
170 Ga0501068_0021794 3300049584 Bacteria 3744
171 Ga0501070_0389770 3300049586 Bacteria 1128
172 Ga0501071_0083891 3300049587 Bacteria 2334
173 Ga0501072_0008751 3300049588 Bacteria 7684
174 Ga0501073_0039735 3300049589 Bacteria 3332
175 Ga0501074_0162690 3300049590 Bacteria 1594
176 Ga0501075_0031686 3300049591 Bacteria 3926
177 Ga0501075_0447730 3300049591 Bacteria 985
178 Ga0501076_0063884 3300049592 Bacteria 2933
179 Ga0501079_0053244 3300049741 Bacteria 3122
180 Ga0501080_0017913 3300049742 Bacteria 6556
181 Ga0501080_0036586 3300049742 Bacteria 4581
182 Ga0501081_0044976 3300049743 Bacteria 3032
183 Ga0501081_0301918 3300049743 Bacteria 1175
184 Ga0501083_0059237 3300049744 Bacteria 2561
185 Ga0501083_0157598 3300049744 Bacteria 1486
186 Ga0501035_0547946 3300049822 Bacteria 948
187 Ga0501044_0191945 3300049823 Bacteria 2005
188 nmdc:mga0yw44_118034_c1 3300050492 Bacteria 1706
189 nmdc:mga06z11_1979_c1 3300050494 Bacteria 7748
190 nmdc:mga06z11_3138_c1 3300050494 Bacteria 6378
191 nmdc:mga06z11_53671_c1 3300050494 Bacteria 2074
192 nmdc:mga04h51_559_c1 3300050495 Bacteria 8854
193 nmdc:mga04h51_9049_c1 3300050495 Bacteria 2685
194 nmdc:mga05p37_498673_c1 3300050507 Bacteria 1398
195 nmdc:mga05p37_9321_c1 3300050507 Bacteria 11611
196 nmdc:mga09592_298_c1 3300050508 Bacteria 36073
197 nmdc:mga0qj67_382829_c1 3300050509 Bacteria 1136
198 nmdc:mga06r32_111073_c1 3300050510 Bacteria 2697
199 nmdc:mga06r32_67019_c1 3300050510 Bacteria 3465
200 nmdc:mga08y16_52051_c1 3300050511 Bacteria 4284
201 Ga0500643_000023 3300053087 Bacteria 273090
202 Ga0500597_014452 3300053120 Bacteria 2961
203 Ga0500642_0009167 3300053130 Bacteria 3421
204 Ga0500568_0069755 3300053139 Bacteria 1347
205 Ga0500636_0040418 3300053177 Bacteria 2758
206 Ga0501084_0055614 3300054114 Bacteria 3311
207 Ga0501084_0309068 3300054114 Unclassified 1335
208 Ga0501082_0135003 3300060353 Unclassified 2141
209 2563927356 2563366752 Bacteria 4961801
210 2587737721 2585428059 Bacteria 8696589
211 2644423185 2643221676 Bacteria 8119172
212 2644717331 2643221731 Bacteria 5623886
213 2644726143 2643221732 Bacteria 5756404
214 2819627923 2818991451 Bacteria 4697364
215 2819710747 2818991465 Bacteria 5388835
216 2842883196 2842882022 Bacteria 6158489
217 2865007952 2865002811 Bacteria 6333767
218 2898911245 2898907183 Bacteria 4067722
219 2904526131 2904524088 Bacteria 5887454
220 2904611646 2904606771 Bacteria 4684500
221 2919145277 2919143609 Bacteria 6219228
222 2919431294 2919425241 Bacteria 8055701
223 2919520465 2919517244 Bacteria 5858162
224 2919721598 2919720352 Bacteria 5986006
225 2928094644 2928093941 Bacteria 5965005
226 2929006834 2929004312 Bacteria 5678476
227 2960324499 2960319331 Bacteria 5502575
228 2960376150 2960375949 Bacteria 5361395
229 2980183626 2980182181 Bacteria 9454109
230 3000019094 3000017691 Bacteria 3772574
231 3001270772 3001267043 Bacteria 4823521
232 3006978198 3006973921 Bacteria 4423788
233 8022893394 8022893055 Bacteria 5300455
234 8022920280 8022914991 Bacteria 5584517
235 Ga0265338_10024463
236 JGI25151J46595_10016074
237 JGI25165J46597_1000008
238 JGI25153J46596_10000320
239 rootH1_10011112
240 rootH2_10317303
241 rootL2_10095634
242 Ga0006562J51391_1009884
243 Ga0055528_1005052
244 Ga0068869_100009349
245 Ga0070689_100025425
246 Ga0070689_100048006
247 Ga0070687_100014079
248 Ga0070668_100407046
249 Ga0070671_100004428
250 Ga0070673_100009813
251 Ga0070688_100437061
252 Ga0070709_10305536
253 Ga0070701_10006904
254 Ga0070711_100005538
255 Ga0070700_100405317
256 Ga0070681_10051398
257 Ga0070706_100556560
258 Ga0070698_100003383
259 Ga0070698_100189420
260 Ga0068853_100454465
261 Ga0070665_100164912
262 Ga0070704_100001245
263 Ga0070704_100131466
264 Ga0068855_100707181
265 Ga0068857_100075607
266 Ga0068857_100139151
267 Ga0070702_100446474
268 Ga0068860_100460750
269 Ga0068862_100463805
270 Ga0070717_10194310
271 Ga0070717_10459299
272 Ga0075365_10225666
273 Ga0075368_10000542
274 Ga0075364_10007566
275 Ga0075367_10001238
276 Ga0075428_100080025
277 Ga0075428_100195273
278 Ga0075430_100459160
279 Ga0075431_100104373
280 Ga0075431_100500292
281 Ga0075429_100000758
282 Ga0111539_10033846
283 Ga0114129_10022973
284 Ga0114129_10478125
285 Ga0105241_10413605
286 Ga0105237_10668465
287 Ga0105239_10169927
288 Ga0105246_10402519
289 Ga0157380_10262920
290 Ga0157377_10114494
291 Ga0157379_10124501
292 Ga0209147_101996
293 Ga0209233_1000006
294 Ga0209673_1001617
295 Ga0209025_1024574
296 Ga0209758_1000032
297 Ga0207655_1086023
298 Ga0207655_1095309
299 Ga0207713_1004642
300 Ga0207699_10150431
301 Ga0207707_10134835
302 Ga0207663_10186375
303 Ga0207662_10026215
304 Ga0207700_10396670
305 Ga0207644_10016447
306 Ga0207709_10242109
307 Ga0207670_10031672
308 Ga0207667_10101751
309 Ga0207651_10084399
310 Ga0207658_10420909
311 Ga0207703_10617717
312 Ga0207639_10159120
313 Ga0207708_10194991
314 Ga0207708_10435695
315 Ga0207674_10070709
316 Ga0207674_10706734
317 Ga0207675_100187755
318 Ga0209813_10039578
319 Ga0268266_10127655
320 Ga0268266_10959917
321 Ga0268265_10335229
322 Ga0268264_10697984
323 Ga0265326_10029575
324 Ga0265338_10106003
325 Ga0373941_0084188
326 Ga0373953_0068563
327 Ga0373931_0000355
328 Ga0395900_0251092
329 Ga0395898_0206919
330 Ga0395901_0816470
331 Ga0436360_0971671
332 Ga0436361_0667579
333 Ga0451577_0050480
334 Ga0451577_0156377
335 Ga0451577_0187707
336 Ga0451577_0321300
337 Ga0453683_0000674
338 Ga0453683_0019498
339 Ga0453683_0075031
340 Ga0466966_0081946
341 Ga0466963_0272096
342 Ga0453684_0000328
343 Ga0453684_0037189
344 Ga0453684_0041630
345 Ga0453684_0053973
346 Ga0453684_0102018
347 Ga0453684_0139378
348 Ga0453684_0556682
349 Ga0453684_0822973
350 Ga0466959_0356491
351 Ga0451576_0001668
352 Ga0451576_0006067
353 Ga0451576_0021735
354 Ga0451576_0554574
355 Ga0466958_0149894
356 Ga0495603_0075758
357 Ga0495585_0060302
358 Ga0495654_0090467
359 Ga0495621_0025778
360 Ga0495661_0162012
361 Ga0495672_0146492
362 Ga0495672_0181947
363 Ga0496100_0003825
364 Ga0496101_0055383
365 Ga0496102_0045934
366 Ga0496104_0001882
367 Ga0496104_0001884
368 Ga0496105_0002086
369 Ga0496105_0004721
370 Ga0496106_0000693
371 Ga0496107_0137388
372 Ga0496108_0008202
373 Ga0496108_0011919
374 Ga0496108_0398299
375 Ga0496109_0000858
376 Ga0496109_0008308
377 Ga0496109_0208393
378 Ga0496110_0000710
379 Ga0496110_0000911
380 Ga0496111_0015305
381 Ga0496112_0002515
382 Ga0496112_0011450
383 Ga0496112_0059656
384 Ga0496113_0001125
385 Ga0496113_0036499
386 Ga0496116_0049352
387 Ga0496117_0033773
388 Ga0496119_0010656
389 Ga0496120_0003437
390 Ga0496120_0092046
391 Ga0496121_0022886
392 Ga0496121_0480871
393 Ga0496124_0318738
394 Ga0496125_0008366
395 Ga0496126_0000030
396 Ga0496126_0042930
397 Ga0501034_0109745
398 Ga0501034_0250820
399 Ga0501036_0673562
400 Ga0501039_0545864
401 Ga0501041_0287677
402 Ga0501043_0372251
403 Ga0501047_0456781
404 Ga0501068_0021794
405 Ga0501070_0389770
406 Ga0501071_0083891
407 Ga0501072_0008751
408 Ga0501073_0039735
409 Ga0501074_0162690
410 Ga0501075_0031686
411 Ga0501075_0447730
412 Ga0501076_0063884
413 Ga0501079_0053244
414 Ga0501080_0017913
415 Ga0501080_0036586
416 Ga0501081_0044976
417 Ga0501081_0301918
418 Ga0501083_0059237
419 Ga0501083_0157598
420 Ga0501035_0547946
421 Ga0501044_0191945
422 nmdc:mga0yw44_118034_c1
423 nmdc:mga06z11_1979_c1
424 nmdc:mga06z11_3138_c1
425 nmdc:mga06z11_53671_c1
426 nmdc:mga04h51_559_c1
427 nmdc:mga04h51_9049_c1
428 nmdc:mga05p37_498673_c1
429 nmdc:mga05p37_9321_c1
430 nmdc:mga09592_298_c1
431 nmdc:mga0qj67_382829_c1
432 nmdc:mga06r32_111073_c1
433 nmdc:mga06r32_67019_c1
434 nmdc:mga08y16_52051_c1
435 Ga0500643_000023
436 Ga0500597_014452
437 Ga0500642_0009167
438 Ga0500568_0069755
439 Ga0500636_0040418
440 Ga0501084_0055614
441 Ga0501084_0309068
442 Ga0501082_0135003
443 2563927356
444 2587737721
445 2644423185
446 2644717331
447 2644726143
448 2819627923
449 2819710747
450 2842883196
451 2865007952
452 2898911245
453 2904526131
454 2904611646
455 2919145277
456 2919431294
457 2919520465
458 2919721598
459 2928094644
460 2929006834
461 2960324499
462 2960376150
463 2980183626
464 3000019094
465 3001270772
466 3006978198
467 8022893394
468 8022920280

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

33

227

0.97

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

39

276

0.96

PF08659

KR

KR domain

34

211

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ged-assembly1.cif.gz_B fingerprint and structural analysis of a apo scor enzyme from clostridium thermocellum 0.9626 7 247
3geg-assembly1.cif.gz_A fingerprint and structural analysis of a scor enzyme with its bound cofactor from clostridium thermocellum 0.9609 7 247
4iin-assembly1.cif.gz_B crystal structure of a putative 3-oxoacyl-[acyl-carrier protein]reductase from helicobacter pylori 26695 complexed with nad+ 0.9608 6 241
8hdn-assembly3.cif.gz_D brucella melitensis 7-alpha-hydroxysteroid dehydrogenase mutant: 1-53 truncation-i258m/k262t 0.9595 2 240
4bmn-assembly1.cif.gz_B apo structure of short-chain alcohol dehydrogenase from ralstonia sp. dsm 6428 0.9591 2 244
ID Description Score Start End Superfamily
af_A0A1D6ED38_49_231_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9715 6 182 3.40.50.720
af_A0A0P0Y501_3_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9707 2 186 3.40.50.720
af_Q6PKH6_18_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9706 3 186 3.40.50.720
af_A0A0P0X9U1_21_128_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9702 3 92 3.40.50.720
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9613 3 86 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3S0JZ58-F1-model_v4 Glucose 1-dehydrogenase (EC 1.1.1.47) 0.996 3 249 GO:0047936
AF-A0A398B1E9-F1-model_v4 SDR family oxidoreductase 0.9922 1 249 GO:0016491
AF-V9G6P1-F1-model_v4 Oxidoreductase, short chain dehydrogenase/reductase family 0.9915 35 249 GO:0016491
AF-A0A7X9MTS4-F1-model_v4 SDR family oxidoreductase 0.9903 3 249 GO:0016491
AF-A0A3S0JZ58-F1-model_v4 Glucose 1-dehydrogenase (EC 1.1.1.47) 0.988 3 249 GO:0047936

Map