F346461

General Info

Members Datasets Scaffolds Average Seq Length
233 181 217 388

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0182266|Ga0496104_0182266_308_1618
Length 436
Sequence MRNDLSRREPAIADNRGPGSTDGNAACARGAVGPRCARCQPYDYLVVGAGFAGAVLAERLAAGLGKTVLIIDRRDHIGGNAYDELDAAGIRIHRYGPHIFHTNAQRIVDYLSKFTEWRPYEHRVKAHVDGMLVPIPINLTTLNVLYGLHMTSVEARAFLAERAEALADVLTSEDVVVSAVGRELYEKFFQGYTRKQWGMDPSQLDKSVTSRVPTRTDTDDRYFADTFQCMPTEGYEPMFRAMLSHPAITVRLNTDFREARNDFLCKHIIYSGPIDEYFDFCFGKLPYRSLRFVHETLDLPQLQPVAVVNYPDENVKYTRITEYKHLTGQCHPRTSISFEYPSATGDPFYPIPCSDNQALYKRYEALAQQTPGTTFVGRLGTYRYYNMDQVVGQALAVYARIEAESRSGERAPPQSASHREAMADSPLQTATDIPSR

Samples

Sample ID Description Type Environment
1 2510065053 Pseudomonas sp. MOIL14HWK12:I1 Isolate Rhizosphere
2 2510065055 Pseudomonas sp. MOIL14HWK12:I2 Isolate Rhizosphere
3 2510065058 Pseudomonas oleovorans MOIL14HWK12 Isolate Rhizosphere
4 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
5 2728369097 Stutzerimonas balearica st101 Isolate Unclassified
6 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
7 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
8 2917832318 Pseudomonas rhizoryzae RY24 Isolate Unclassified
9 2919125081 Pseudomonas psychrotolerans 1545 Isolate Rhizosphere
10 2974289157 Pseudomonas fluorescens SORGH_AS 191 Isolate Unclassified
11 2984504281 Pseudomonas psychrotolerans SORGH_AS201 Isolate Aerial Root
12 3007252601 Pseudomonas punonensis D1-6 Isolate Unclassified
13 3007315729 Pseudomonas argentinensis SA190 Isolate Unclassified
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
20 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
21 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
42 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
99 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
100 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
101 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
102 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
108 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
112 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
113 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
114 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
115 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
116 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
117 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
118 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
119 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
120 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
121 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
122 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
123 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
124 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
125 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
126 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
127 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
128 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
129 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
130 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
131 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
134 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
135 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
136 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
137 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
138 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
139 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
140 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
141 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
142 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
143 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
144 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
145 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
146 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
157 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
158 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
162 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
163 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
168 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
169 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
170 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
171 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
172 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
173 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
174 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
175 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
176 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
177 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
178 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
179 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
180 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
181 8016728285 Pseudomonas psychrotolerans SORGH_AS 227 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.13
Metatranscriptomes 0
Isolates 6.87

Biome Distribution

Category Percentage (%)
Aerial Root 0.43
Bulb 0
Endosphere 11.16
Nodule 0
Rhizoplane 1.29
Rhizosphere 77.68
Stem 0
Stem Tuber 0
Unclassified 9.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10019989 3300003320 Bacteria 27211
2 rootH2_10031514 3300003320 Bacteria 4820
3 Ga0055536_1000072 3300003781 Bacteria 91344
4 Ga0065715_10132169 3300005293 Bacteria 1995
5 Ga0070690_100007186 3300005330 Bacteria 6369
6 Ga0070670_100002171 3300005331 Bacteria 16116
7 Ga0070670_100046657 3300005331 Bacteria 3726
8 Ga0070677_10046891 3300005333 Bacteria 1730
9 Ga0070666_10006903 3300005335 Bacteria 6996
10 Ga0070666_10100523 3300005335 Bacteria 1993
11 Ga0070687_100005178 3300005343 Bacteria 5265
12 Ga0070675_100005917 3300005354 Bacteria 9367
13 Ga0070671_100001611 3300005355 Bacteria 17011
14 Ga0070671_100099232 3300005355 Bacteria 2442
15 Ga0070673_100002659 3300005364 Bacteria 10937
16 Ga0070673_100075925 3300005364 Bacteria 2712
17 Ga0070673_100076281 3300005364 Bacteria 2707
18 Ga0070659_100007564 3300005366 Bacteria 7895
19 Ga0070667_100000316 3300005367 Bacteria 54130
20 Ga0070667_100000797 3300005367 Bacteria 29488
21 Ga0070667_100001364 3300005367 Bacteria 21900
22 Ga0070667_100293029 3300005367 Bacteria 1464
23 Ga0070705_100131163 3300005440 Bacteria 1635
24 Ga0070694_100114753 3300005444 Bacteria 1924
25 Ga0070678_100057885 3300005456 Bacteria 2842
26 Ga0068853_100198908 3300005539 Bacteria 1823
27 Ga0070686_100003016 3300005544 Bacteria 9228
28 Ga0070695_100049102 3300005545 Bacteria 2701
29 Ga0070693_100004105 3300005547 Bacteria 6858
30 Ga0070693_100032319 3300005547 Bacteria 2876
31 Ga0070665_100003795 3300005548 Bacteria 15994
32 Ga0070665_100293720 3300005548 Bacteria 1627
33 Ga0070664_100008163 3300005564 Bacteria 8466
34 Ga0068859_100000117 3300005617 Bacteria 75377
35 Ga0068859_100096495 3300005617 Bacteria 3009
36 Ga0068864_100000161 3300005618 Bacteria 62543
37 Ga0068864_100007627 3300005618 Bacteria 8912
38 Ga0068863_100000883 3300005841 Bacteria 30162
39 Ga0068860_100002463 3300005843 Bacteria 19436
40 Ga0068860_100013749 3300005843 Bacteria 7936
41 Ga0068862_100041035 3300005844 Bacteria 3936
42 Ga0075363_100077525 3300006048 Bacteria 1813
43 Ga0075362_10012693 3300006177 Bacteria 3353
44 Ga0075367_10087213 3300006178 Bacteria 1895
45 Ga0075369_10040291 3300006186 Bacteria 1996
46 Ga0075370_10055732 3300006353 Bacteria 2246
47 Ga0075370_10059647 3300006353 Bacteria 2172
48 Ga0075430_100043335 3300006846 Bacteria 3803
49 Ga0075431_100062283 3300006847 Unclassified 3849
50 Ga0075433_10296940 3300006852 Bacteria 1431
51 Ga0075434_100128600 3300006871 Bacteria 2551
52 Ga0075429_100123976 3300006880 Bacteria 2259
53 Ga0097620_100000117 3300006931 Bacteria 75377
54 Ga0097620_100096495 3300006931 Bacteria 3009
55 Ga0111539_10199101 3300009094 Bacteria 2336
56 Ga0105245_10005371 3300009098 Bacteria 11256
57 Ga0105245_10077935 3300009098 Bacteria 3023
58 Ga0105245_10313951 3300009098 Bacteria 1542
59 Ga0114129_10066668 3300009147 Bacteria 5021
60 Ga0105243_10068583 3300009148 Bacteria 2858
61 Ga0105243_10083843 3300009148 Bacteria 2608
62 Ga0105242_10000344 3300009176 Bacteria 37518
63 Ga0105248_10000496 3300009177 Bacteria 44725
64 Ga0105248_10004734 3300009177 Bacteria 15065
65 Ga0105249_10030493 3300009553 Bacteria 4875
66 Ga0105249_10105550 3300009553 Bacteria 2656
67 Ga0105249_10304816 3300009553 Bacteria 1599
68 Ga0157373_10026095 3300013100 Bacteria 4223
69 Ga0157371_10010313 3300013102 Bacteria 7291
70 Ga0157371_10119129 3300013102 Bacteria 1877
71 Ga0157370_10185513 3300013104 Bacteria 1931
72 Ga0157378_10016208 3300013297 Bacteria 6527
73 Ga0157378_10102060 3300013297 Bacteria 2620
74 Ga0163162_10038689 3300013306 Bacteria 4760
75 Ga0163162_10062462 3300013306 Bacteria 3765
76 Ga0157372_10005497 3300013307 Bacteria 13464
77 Ga0157372_10274616 3300013307 Bacteria 1959
78 Ga0157375_10008864 3300013308 Bacteria 8805
79 Ga0157375_10047341 3300013308 Bacteria 4199
80 Ga0163163_10001156 3300014325 Bacteria 22424
81 Ga0163163_10008934 3300014325 Bacteria 8927
82 Ga0157379_10006868 3300014968 Bacteria 9838
83 Ga0157376_10203142 3300014969 Bacteria 1825
84 Ga0209677_100839 3300025253 Bacteria 15220
85 Ga0209677_106205 3300025253 Bacteria 2897
86 Ga0209676_1000020 3300025292 Bacteria 617256
87 Ga0207660_10019491 3300025917 Bacteria 4535
88 Ga0207662_10002987 3300025918 Bacteria 8612
89 Ga0207657_10014896 3300025919 Bacteria 7565
90 Ga0207649_10059599 3300025920 Bacteria 2396
91 Ga0207687_10058406 3300025927 Bacteria 2714
92 Ga0207644_10010606 3300025931 Bacteria 6075
93 Ga0207644_10026771 3300025931 Bacteria 3978
94 Ga0207686_10000160 3300025934 Bacteria 51361
95 Ga0207711_10000039 3300025941 Bacteria 162974
96 Ga0207679_10031136 3300025945 Bacteria 3732
97 Ga0207651_10002987 3300025960 Bacteria 8187
98 Ga0207712_10215340 3300025961 Bacteria 1532
99 Ga0207658_10001295 3300025986 Bacteria 19787
100 Ga0207658_10001518 3300025986 Bacteria 18019
101 Ga0207658_10002606 3300025986 Bacteria 13092
102 Ga0207703_10230620 3300026035 Bacteria 1660
103 Ga0207708_10164660 3300026075 Bacteria 1753
104 Ga0207708_10184227 3300026075 Bacteria 1659
105 Ga0207641_10000185 3300026088 Bacteria 86885
106 Ga0207676_10000985 3300026095 Bacteria 21917
107 Ga0207674_10000606 3300026116 Bacteria 47000
108 Ga0207683_10082602 3300026121 Bacteria 2854
109 Ga0207698_10067085 3300026142 Bacteria 2828
110 Ga0209996_1008407 3300027395 Bacteria 1352
111 Ga0209995_1002878 3300027471 Bacteria 2729
112 Ga0209983_1003664 3300027665 Bacteria 3259
113 Ga0209971_1005046 3300027682 Bacteria 3136
114 Ga0209974_10006679 3300027876 Bacteria 4011
115 Ga0268266_10019306 3300028379 Bacteria 5806
116 Ga0268265_10029294 3300028380 Bacteria 3950
117 Ga0268264_10001136 3300028381 Bacteria 26086
118 Ga0268264_10007881 3300028381 Bacteria 8863
119 Ga0268264_10168359 3300028381 Bacteria 1980
120 Ga0307517_10110442 3300028786 Bacteria 2096
121 Ga0307512_10031151 3300030522 Bacteria 4624
122 Ga0316182_1085524 3300030745 Bacteria 1654
123 Ga0307513_10051933 3300031456 Bacteria 4417
124 Ga0307509_10028523 3300031507 Bacteria 6203
125 Ga0307509_10112331 3300031507 Bacteria 2725
126 Ga0307509_10169402 3300031507 Bacteria 2066
127 Ga0307408_100004092 3300031548 Bacteria 9951
128 Ga0307508_10067049 3300031616 Bacteria 3158
129 Ga0316576_10036715 3300031727 Bacteria 3503
130 Ga0307409_100015355 3300031995 Bacteria 5024
131 Ga0307411_10101866 3300032005 Bacteria 2033
132 Ga0307510_10009233 3300033180 Bacteria 11751
133 Ga0307510_10047428 3300033180 Bacteria 4602
134 Ga0307510_10156745 3300033180 Bacteria 1882
135 Ga0373931_0001371 3300035691 Bacteria 10416
136 Ga0373925_0223579 3300037068 Bacteria 1503
137 Ga0395901_0314544 3300038443 Bacteria 1621
138 Ga0436365_0209341 3300039437 Unclassified 1272
139 Ga0436361_0862576 3300039447 Bacteria 7676
140 Ga0436361_0876709 3300039447 Bacteria 2176
141 Ga0436361_0933202 3300039447 Bacteria 4536
142 Ga0439438_001348 3300041405 Bacteria 10862
143 Ga0439447_004336 3300041407 Bacteria 4907
144 Ga0439466_0029710 3300041411 Bacteria 1878
145 Ga0439445_0008788 3300042004 Bacteria 2370
146 Ga0439432_000217 3300042006 Bacteria 20654
147 Ga0439452_003143 3300042010 Bacteria 5849
148 Ga0466961_0002684 3300044693 Bacteria 11042
149 Ga0495627_000129 3300046453 Bacteria 91281
150 Ga0495592_0000213 3300046454 Bacteria 49631
151 Ga0495638_0029048 3300046460 Bacteria 3566
152 Ga0495650_0048711 3300046471 Bacteria 1764
153 Ga0495584_0000627 3300046491 Bacteria 23606
154 Ga0495585_0001432 3300046492 Bacteria 18715
155 Ga0495585_0003590 3300046492 Bacteria 10401
156 Ga0495607_0000095 3300046501 Bacteria 92380
157 Ga0495607_0000892 3300046501 Bacteria 27863
158 Ga0495607_0025594 3300046501 Bacteria 3668
159 Ga0495583_0001132 3300046506 Bacteria 29206
160 Ga0495606_0110799 3300046507 Bacteria 1656
161 Ga0495616_0004352 3300046513 Bacteria 8935
162 Ga0495620_0035855 3300046515 Bacteria 2226
163 Ga0495632_0001117 3300046519 Bacteria 23014
164 Ga0495632_0044873 3300046519 Bacteria 2204
165 Ga0495632_0094635 3300046519 Bacteria 1412
166 Ga0495643_0000435 3300046522 Bacteria 54331
167 Ga0495597_0030426 3300046542 Bacteria 2461
168 Ga0495645_0046077 3300046543 Bacteria 3179
169 Ga0495668_0003189 3300046616 Bacteria 12562
170 Ga0495668_0023518 3300046616 Bacteria 3512
171 Ga0495611_0000892 3300046648 Bacteria 16215
172 Ga0495661_0004152 3300046665 Bacteria 10533
173 Ga0495670_0021680 3300046691 Bacteria 3170
174 Ga0495671_0020890 3300046692 Bacteria 3446
175 Ga0495649_0001604 3300046694 Bacteria 16862
176 Ga0495683_0000152 3300047323 Bacteria 68218
177 Ga0495683_0001371 3300047323 Bacteria 16197
178 Ga0495687_019833 3300047443 Bacteria 3289
179 Ga0495687_038062 3300047443 Bacteria 2137
180 Ga0495679_000552 3300047446 Bacteria 26335
181 Ga0495681_0043676 3300047470 Bacteria 2159
182 Ga0495626_0004607 3300048091 Bacteria 8401
183 Ga0496104_0133205 3300048907 Bacteria 2388
184 Ga0496104_0182266 3300048907 Bacteria 2010
185 Ga0496108_0000992 3300048911 Bacteria 22116
186 Ga0501031_0071806 3300049568 Bacteria 2254
187 Ga0501034_0055485 3300049571 Bacteria 3987
188 Ga0501038_0009107 3300049574 Bacteria 9112
189 Ga0501043_0000439 3300049579 Bacteria 37482
190 Ga0501046_0003318 3300049580 Bacteria 14796
191 Ga0501047_0000069 3300049581 Bacteria 129231
192 Ga0501073_0009326 3300049589 Bacteria 7240
193 Ga0501234_000281 3300049707 Bacteria 7467
194 Ga0501241_000117 3300049758 Bacteria 17309
195 Ga0501269_002054 3300049766 Bacteria 2531
196 Ga0501035_0035047 3300049822 Bacteria 4558
197 Ga0501044_0077139 3300049823 Bacteria 3380
198 nmdc:mga0k408_123713_c1 3300050493 Bacteria 1533
199 nmdc:mga06z11_95259_c1 3300050494 Bacteria 1624
200 nmdc:mga07m45_28419_c1 3300050496 Bacteria 3087
201 nmdc:mga07m45_9934_c1 3300050496 Bacteria 4953
202 nmdc:mga05p37_18268_c1 3300050507 Bacteria 8471
203 nmdc:mga0qj67_33536_c1 3300050509 Bacteria 4007
204 nmdc:mga0qj67_74493_c1 3300050509 Bacteria 2713
205 nmdc:mga06r32_7822_c1 3300050510 Bacteria 9609
206 Ga0500635_0000194 3300053080 Bacteria 31226
207 Ga0500644_0002124 3300053088 Bacteria 5020
208 Ga0500641_0006959 3300053096 Bacteria 4025
209 Ga0500562_013025 3300053108 Bacteria 2119
210 Ga0500594_0002352 3300053118 Bacteria 4106
211 Ga0500658_0018700 3300053134 Bacteria 2601
212 Ga0500559_0000623 3300053136 Bacteria 24048
213 Ga0500568_0004914 3300053139 Bacteria 7035
214 Ga0500573_0004954 3300053140 Bacteria 7072
215 Ga0500619_005247 3300053154 Bacteria 2869
216 Ga0500622_0003110 3300053156 Bacteria 11421
217 Ga0500636_0046300 3300053177 Bacteria 2564

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049707 Ga0501234_000281 Ga0501234_000281_117_1175 337
2 3300005843 Ga0068860_100002463 Ga0068860_10000246321 345
3 3300028381 Ga0268264_10007881 Ga0268264_100078816 345
4 3300046543 Ga0495645_0046077 Ga0495645_0046077_131_1306 356
5 iso_pu_bacteria 2671180139 2671695889 356
6 iso_pu_bacteria 2739367866 2740031461 357
7 3300046507 Ga0495606_0110799 Ga0495606_0110799_264_1433 358
8 iso_pu_bacteria 2888388044 2888392195 359
9 3300005293 Ga0065715_10132169 Ga0065715_101321692 360
10 3300005330 Ga0070690_100007186 Ga0070690_1000071862 360
11 3300005331 Ga0070670_100002171 Ga0070670_1000021719 360
12 3300005331 Ga0070670_100046657 Ga0070670_1000466572 360
13 3300005333 Ga0070677_10046891 Ga0070677_100468912 360
14 3300005343 Ga0070687_100005178 Ga0070687_1000051783 360
15 3300005354 Ga0070675_100005917 Ga0070675_1000059172 360
16 3300005355 Ga0070671_100001611 Ga0070671_1000016118 360
17 3300005364 Ga0070673_100002659 Ga0070673_1000026597 360
18 3300005366 Ga0070659_100007564 Ga0070659_1000075646 360
19 3300005440 Ga0070705_100131163 Ga0070705_1001311632 360
20 3300005444 Ga0070694_100114753 Ga0070694_1001147531 360
21 3300005544 Ga0070686_100003016 Ga0070686_1000030165 360
22 3300005545 Ga0070695_100049102 Ga0070695_1000491022 360
23 3300005547 Ga0070693_100004105 Ga0070693_1000041052 360
24 3300005547 Ga0070693_100032319 Ga0070693_1000323192 360
25 3300005548 Ga0070665_100293720 Ga0070665_1002937202 360
26 3300005564 Ga0070664_100008163 Ga0070664_1000081634 360
27 3300005617 Ga0068859_100096495 Ga0068859_1000964951 360
28 3300005618 Ga0068864_100007627 Ga0068864_1000076277 360
29 3300006846 Ga0075430_100043335 Ga0075430_1000433353 360
30 3300006847 Ga0075431_100062283 Ga0075431_1000622835 360
31 3300006852 Ga0075433_10296940 Ga0075433_102969402 360
32 3300006871 Ga0075434_100128600 Ga0075434_1001286002 360
33 3300006880 Ga0075429_100123976 Ga0075429_1001239762 360
34 3300006931 Ga0097620_100096495 Ga0097620_1000964952 360
35 3300009094 Ga0111539_10199101 Ga0111539_101991012 360
36 3300009098 Ga0105245_10313951 Ga0105245_103139511 360
37 3300009147 Ga0114129_10066668 Ga0114129_100666682 360
38 3300009148 Ga0105243_10068583 Ga0105243_100685832 360
39 3300009176 Ga0105242_10000344 Ga0105242_1000034419 360
40 3300013102 Ga0157371_10119129 Ga0157371_101191292 360
41 3300013104 Ga0157370_10185513 Ga0157370_101855131 360
42 3300013297 Ga0157378_10016208 Ga0157378_100162085 360
43 3300013297 Ga0157378_10102060 Ga0157378_101020602 360
44 3300013306 Ga0163162_10038689 Ga0163162_100386894 360
45 3300013307 Ga0157372_10005497 Ga0157372_100054977 360
46 3300013307 Ga0157372_10274616 Ga0157372_102746162 360
47 3300014325 Ga0163163_10001156 Ga0163163_1000115619 360
48 3300014325 Ga0163163_10008934 Ga0163163_100089342 360
49 3300014969 Ga0157376_10203142 Ga0157376_102031421 360
50 3300025917 Ga0207660_10019491 Ga0207660_100194913 360
51 3300025918 Ga0207662_10002987 Ga0207662_100029872 360
52 3300025919 Ga0207657_10014896 Ga0207657_100148964 360
53 3300025920 Ga0207649_10059599 Ga0207649_100595992 360
54 3300025934 Ga0207686_10000160 Ga0207686_1000016020 360
55 3300025945 Ga0207679_10031136 Ga0207679_100311363 360
56 3300025960 Ga0207651_10002987 Ga0207651_100029872 360
57 3300026035 Ga0207703_10230620 Ga0207703_102306202 360
58 3300026075 Ga0207708_10164660 Ga0207708_101646601 360
59 3300026075 Ga0207708_10184227 Ga0207708_101842272 360
60 3300026116 Ga0207674_10000606 Ga0207674_1000060615 360
61 3300026142 Ga0207698_10067085 Ga0207698_100670852 360
62 3300030745 Ga0316182_1085524 Ga0316182_10855241 360
63 3300031995 Ga0307409_100015355 Ga0307409_1000153553 360
64 3300032005 Ga0307411_10101866 Ga0307411_101018662 360
65 3300038443 Ga0395901_0314544 Ga0395901_0314544_262_1464 360
66 3300039437 Ga0436365_0209341 Ga0436365_0209341_40_1161 360
67 3300048907 Ga0496104_0133205 Ga0496104_0133205_450_1670 360
68 3300048911 Ga0496108_0000992 Ga0496108_0000992_13995_15095 360
69 3300049568 Ga0501031_0071806 Ga0501031_0071806_925_2046 360
70 3300049574 Ga0501038_0009107 Ga0501038_0009107_4161_5342 360
71 3300049589 Ga0501073_0009326 Ga0501073_0009326_889_2004 360
72 3300050493 nmdc:mga0k408_123713_c1 nmdc:mga0k408_123713_c1_153_1265 360
73 3300050507 nmdc:mga05p37_18268_c1 nmdc:mga05p37_18268_c1_7018_8139 360
74 3300050509 nmdc:mga0qj67_33536_c1 nmdc:mga0qj67_33536_c1_104_1336 360
75 3300050509 nmdc:mga0qj67_74493_c1 nmdc:mga0qj67_74493_c1_1526_2647 360
76 3300050510 nmdc:mga06r32_7822_c1 nmdc:mga06r32_7822_c1_6682_7803 360
77 3300053096 Ga0500641_0006959 Ga0500641_0006959_2861_3982 360
78 iso_pu_bacteria 2510065053 2510285053 360
79 iso_pu_bacteria 2510065055 2510294111 360
80 iso_pu_bacteria 2510065058 2510313142 360
81 iso_pu_bacteria 2917832318 2917835501 360
82 iso_pu_bacteria 2919125081 2919129158 360
83 iso_pu_bacteria 2984504281 2984504443 360
84 iso_pu_bacteria 8016728285 8016728320 360
85 3300005367 Ga0070667_100000797 Ga0070667_10000079710 361
86 3300005456 Ga0070678_100057885 Ga0070678_1000578852 361
87 3300005548 Ga0070665_100003795 Ga0070665_10000379513 361
88 3300006048 Ga0075363_100077525 Ga0075363_1000775252 361
89 3300006177 Ga0075362_10012693 Ga0075362_100126932 361
90 3300006178 Ga0075367_10087213 Ga0075367_100872132 361
91 3300006186 Ga0075369_10040291 Ga0075369_100402912 361
92 3300006353 Ga0075370_10055732 Ga0075370_100557321 361
93 3300006353 Ga0075370_10059647 Ga0075370_100596472 361
94 3300009098 Ga0105245_10005371 Ga0105245_100053714 361
95 3300009098 Ga0105245_10077935 Ga0105245_100779353 361
96 3300009148 Ga0105243_10083843 Ga0105243_100838432 361
97 3300013308 Ga0157375_10008864 Ga0157375_100088644 361
98 3300013308 Ga0157375_10047341 Ga0157375_100473411 361
99 3300025253 Ga0209677_100839 Ga0209677_10083910 361
100 3300025253 Ga0209677_106205 Ga0209677_1062052 361
101 3300025927 Ga0207687_10058406 Ga0207687_100584063 361
102 3300025931 Ga0207644_10010606 Ga0207644_100106065 361
103 3300025986 Ga0207658_10001518 Ga0207658_1000151810 361
104 3300026121 Ga0207683_10082602 Ga0207683_100826022 361
105 3300028379 Ga0268266_10019306 Ga0268266_100193065 361
106 3300028381 Ga0268264_10168359 Ga0268264_101683591 361
107 3300028786 Ga0307517_10110442 Ga0307517_101104422 361
108 3300030522 Ga0307512_10031151 Ga0307512_100311515 361
109 3300031456 Ga0307513_10051933 Ga0307513_100519334 361
110 3300031507 Ga0307509_10028523 Ga0307509_100285232 361
111 3300031507 Ga0307509_10112331 Ga0307509_101123312 361
112 3300031507 Ga0307509_10169402 Ga0307509_101694022 361
113 3300031616 Ga0307508_10067049 Ga0307508_100670493 361
114 3300033180 Ga0307510_10009233 Ga0307510_1000923311 361
115 3300033180 Ga0307510_10047428 Ga0307510_100474282 361
116 3300033180 Ga0307510_10156745 Ga0307510_101567451 361
117 3300035691 Ga0373931_0001371 Ga0373931_0001371_3831_4946 361
118 3300037068 Ga0373925_0223579 Ga0373925_0223579_38_1195 361
119 3300046454 Ga0495592_0000213 Ga0495592_0000213_11_1183 361
120 3300046460 Ga0495638_0029048 Ga0495638_0029048_809_1981 361
121 3300046492 Ga0495585_0003590 Ga0495585_0003590_2785_3900 361
122 3300046515 Ga0495620_0035855 Ga0495620_0035855_1032_2204 361
123 3300046519 Ga0495632_0094635 Ga0495632_0094635_209_1369 361
124 3300046542 Ga0495597_0030426 Ga0495597_0030426_458_1618 361
125 3300046616 Ga0495668_0023518 Ga0495668_0023518_290_1447 361
126 3300046692 Ga0495671_0020890 Ga0495671_0020890_1630_2787 361
127 3300046694 Ga0495649_0001604 Ga0495649_0001604_6853_8013 361
128 3300047443 Ga0495687_019833 Ga0495687_019833_1725_2885 361
129 3300047443 Ga0495687_038062 Ga0495687_038062_578_1738 361
130 3300049571 Ga0501034_0055485 Ga0501034_0055485_2289_3407 361
131 3300049822 Ga0501035_0035047 Ga0501035_0035047_2053_3171 361
132 3300050494 nmdc:mga06z11_95259_c1 nmdc:mga06z11_95259_c1_73_1233 361
133 3300050496 nmdc:mga07m45_28419_c1 nmdc:mga07m45_28419_c1_304_1464 361
134 3300050496 nmdc:mga07m45_9934_c1 nmdc:mga07m45_9934_c1_2613_3773 361
135 3300053080 Ga0500635_0000194 Ga0500635_0000194_4687_5853 361
136 3300053088 Ga0500644_0002124 Ga0500644_0002124_3059_4231 361
137 3300053108 Ga0500562_013025 Ga0500562_013025_276_1448 361
138 3300053118 Ga0500594_0002352 Ga0500594_0002352_889_2061 361
139 3300053134 Ga0500658_0018700 Ga0500658_0018700_1241_2401 361
140 3300053136 Ga0500559_0000623 Ga0500559_0000623_11167_12339 361
141 3300053139 Ga0500568_0004914 Ga0500568_0004914_3939_5099 361
142 3300053154 Ga0500619_005247 Ga0500619_005247_108_1280 361
143 3300053156 Ga0500622_0003110 Ga0500622_0003110_6684_7856 361
144 3300053177 Ga0500636_0046300 Ga0500636_0046300_444_1616 361
145 3300039447 Ga0436361_0862576 Ga0436361_0862576_4114_5232 362
146 3300039447 Ga0436361_0876709 Ga0436361_0876709_415_1614 362
147 3300039447 Ga0436361_0933202 Ga0436361_0933202_3072_4190 362
148 3300003320 rootH2_10031514 rootH2_100315143 363
149 3300049823 Ga0501044_0077139 Ga0501044_0077139_1174_2286 363
150 iso_pu_bacteria 2728369097 2729146417 365
151 iso_pu_bacteria 2974289157 2974291117 365
152 iso_pu_bacteria 640427133 640488834 365
153 iso_pu_bacteria 651053060 651176926 365
154 3300003781 Ga0055536_1000072 Ga0055536_100007270 366
155 3300005335 Ga0070666_10100523 Ga0070666_101005232 366
156 3300005355 Ga0070671_100099232 Ga0070671_1000992322 366
157 3300005364 Ga0070673_100075925 Ga0070673_1000759252 366
158 3300005364 Ga0070673_100076281 Ga0070673_1000762812 366
159 3300005367 Ga0070667_100001364 Ga0070667_1000013643 366
160 3300005367 Ga0070667_100293029 Ga0070667_1002930292 366
161 3300005539 Ga0068853_100198908 Ga0068853_1001989082 366
162 3300005617 Ga0068859_100000117 Ga0068859_10000011744 366
163 3300005618 Ga0068864_100000161 Ga0068864_10000016148 366
164 3300005841 Ga0068863_100000883 Ga0068863_1000008838 366
165 3300005843 Ga0068860_100013749 Ga0068860_1000137495 366
166 3300005844 Ga0068862_100041035 Ga0068862_1000410352 366
167 3300006931 Ga0097620_100000117 Ga0097620_10000011744 366
168 3300009177 Ga0105248_10000496 Ga0105248_1000049633 366
169 3300009177 Ga0105248_10004734 Ga0105248_100047344 366
170 3300009553 Ga0105249_10030493 Ga0105249_100304934 366
171 3300009553 Ga0105249_10105550 Ga0105249_101055502 366
172 3300009553 Ga0105249_10304816 Ga0105249_103048162 366
173 3300013100 Ga0157373_10026095 Ga0157373_100260953 366
174 3300013102 Ga0157371_10010313 Ga0157371_100103133 366
175 3300013306 Ga0163162_10062462 Ga0163162_100624623 366
176 3300014968 Ga0157379_10006868 Ga0157379_100068688 366
177 3300025292 Ga0209676_1000020 Ga0209676_100002087 366
178 3300025931 Ga0207644_10026771 Ga0207644_100267713 366
179 3300025941 Ga0207711_10000039 Ga0207711_1000003963 366
180 3300025961 Ga0207712_10215340 Ga0207712_102153402 366
181 3300025986 Ga0207658_10001295 Ga0207658_1000129520 366
182 3300026088 Ga0207641_10000185 Ga0207641_1000018528 366
183 3300026095 Ga0207676_10000985 Ga0207676_100009852 366
184 3300027395 Ga0209996_1008407 Ga0209996_10084071 366
185 3300027471 Ga0209995_1002878 Ga0209995_10028781 366
186 3300027665 Ga0209983_1003664 Ga0209983_10036642 366
187 3300027682 Ga0209971_1005046 Ga0209971_10050462 366
188 3300027876 Ga0209974_10006679 Ga0209974_100066793 366
189 3300028380 Ga0268265_10029294 Ga0268265_100292943 366
190 3300028381 Ga0268264_10001136 Ga0268264_1000113622 366
191 3300031548 Ga0307408_100004092 Ga0307408_1000040921 366
192 3300041405 Ga0439438_001348 Ga0439438_001348_3568_4749 366
193 3300041407 Ga0439447_004336 Ga0439447_004336_2616_3899 366
194 3300041411 Ga0439466_0029710 Ga0439466_0029710_583_1764 366
195 3300042004 Ga0439445_0008788 Ga0439445_0008788_832_2004 366
196 3300042006 Ga0439432_000217 Ga0439432_000217_16754_17935 366
197 3300042010 Ga0439452_003143 Ga0439452_003143_2740_3921 366
198 3300044693 Ga0466961_0002684 Ga0466961_0002684_9759_11003 366
199 3300046453 Ga0495627_000129 Ga0495627_000129_35137_36330 366
200 3300046471 Ga0495650_0048711 Ga0495650_0048711_239_1615 366
201 3300046491 Ga0495584_0000627 Ga0495584_0000627_2026_3207 366
202 3300046501 Ga0495607_0000095 Ga0495607_0000095_91052_92230 366
203 3300046501 Ga0495607_0025594 Ga0495607_0025594_1160_2353 366
204 3300047323 Ga0495683_0000152 Ga0495683_0000152_20387_21568 366
205 3300048907 Ga0496104_0182266 Ga0496104_0182266_308_1618 366
206 3300049758 Ga0501241_000117 Ga0501241_000117_12644_13834 366
207 3300049766 Ga0501269_002054 Ga0501269_002054_320_1510 366
208 3300053140 Ga0500573_0004954 Ga0500573_0004954_2182_3375 366
209 iso_pu_bacteria 3007252601 3007252802 366
210 iso_pu_bacteria 3007315729 3007318542 366
211 3300003320 rootH2_10019989 rootH2_1001998922 367
212 3300005335 Ga0070666_10006903 Ga0070666_100069034 367
213 3300005367 Ga0070667_100000316 Ga0070667_10000031632 367
214 3300025986 Ga0207658_10002606 Ga0207658_1000260611 367
215 3300031727 Ga0316576_10036715 Ga0316576_100367152 367
216 3300046492 Ga0495585_0001432 Ga0495585_0001432_10172_11293 367
217 3300046501 Ga0495607_0000892 Ga0495607_0000892_14237_15358 367
218 3300046506 Ga0495583_0001132 Ga0495583_0001132_10842_11963 367
219 3300046513 Ga0495616_0004352 Ga0495616_0004352_3325_4446 367
220 3300046519 Ga0495632_0001117 Ga0495632_0001117_3488_4609 367
221 3300046519 Ga0495632_0044873 Ga0495632_0044873_465_1586 367
222 3300046522 Ga0495643_0000435 Ga0495643_0000435_40870_41991 367
223 3300046616 Ga0495668_0003189 Ga0495668_0003189_5499_6620 367
224 3300046648 Ga0495611_0000892 Ga0495611_0000892_11378_12499 367
225 3300046665 Ga0495661_0004152 Ga0495661_0004152_6255_7376 367
226 3300046691 Ga0495670_0021680 Ga0495670_0021680_1723_2844 367
227 3300047323 Ga0495683_0001371 Ga0495683_0001371_6982_8103 367
228 3300047446 Ga0495679_000552 Ga0495679_000552_15047_16168 367
229 3300047470 Ga0495681_0043676 Ga0495681_0043676_394_1515 367
230 3300048091 Ga0495626_0004607 Ga0495626_0004607_3746_4867 367
231 3300049579 Ga0501043_0000439 Ga0501043_0000439_4531_5739 367
232 3300049580 Ga0501046_0003318 Ga0501046_0003318_5067_6275 367
233 3300049581 Ga0501047_0000069 Ga0501047_0000069_85407_86615 367

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03275

GLF

UDP-galactopyranose mutase

187

384

0.98

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

46

114

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hdq-assembly1.cif.gz_A crystal structure of udp-galactopyranose mutase (oxidized form) in complex with substrate 0.9853 2 367
3hdq-assembly1.cif.gz_A crystal structure of udp-galactopyranose mutase (oxidized form) in complex with substrate 0.9827 2 367
8a1r-assembly1.cif.gz_A cryo-em structure of thioredoxin glutathione reductase in complex with a non-competitive inhibitor 0.9771 7 36
6c12-assembly1.cif.gz_B sdha-sdhe complex 0.9733 6 38
6c12-assembly2.cif.gz_A sdha-sdhe complex 0.9688 6 38
ID Description Score Start End Superfamily
af_P9WHH5_150_268_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.994 9 41 3.50.50.60
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9921 9 36 3.50.50.60
af_Q4D4H1_7_167_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9896 7 37 3.50.50.60
af_Q46811_547_618_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9879 10 43 3.40.50.720
af_P9WN19_146_269_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9857 9 43 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A2W5ZY91-F1-model_v4 UDP-galactopyranose mutase 0.9955 199 365 GO:0005829
GO:0008767
GO:0050660
AF-A0A1G7X586-F1-model_v4 UDP-galactopyranose mutase 0.9948 9 367 GO:0005829
GO:0008767
GO:0050660
AF-A0A838H127-F1-model_v4 deleted 0.9943 249 365
AF-A0A009L7D0-F1-model_v4 deleted 0.9939 9 366
AF-A0A810YGR6-F1-model_v4 deleted 0.9935 6 344

Feature Viewer

pLDDT pTM Quality
94.93 0.91 High
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Predicted Structure (AlphaFold2)

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