F346181

General Info

Members Datasets Scaffolds Average Seq Length
233 157 466 324

Family's Representative Sequence

Representative Sequence 3300025972|Ga0207668_10147169|Ga0207668_101471692
Length 372
Sequence VAGRGSAGHADAPAGEMPWGGGGTPLPAALPERPCADYRAPMTTTNSEAVIIRAPGGPEALELSSVQVSAPGSGEVLIRHTAIGLNYIDTYHRSGLYPLPSLPHGLGVEAAGVVEAVGANVSGVALGQRVAYATAGPGAYATRRVVRAELVVPIPAGVSDEAAAAVLLKGMTVEYLVRRTYPVRAGETVLWHAAAGGVGLLACQWLRHLRVRVIGTVGSREKAQLAQRHGCDVPILYTEEGDLSEKVRALTSGAGVAVVYDSVGRATFQSSLRSLAPRGLLVSFGNASGKPEPVDILTLAAHGSLFLTRPTLGHYTRDRAELTSSANAVFELVSQGVLQPMIGQRFALRDIRRAHRALEARETVGSTVILLD

Samples

Sample ID Description Type Environment
1 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
59 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
90 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
91 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
92 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
93 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
94 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
97 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
98 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
110 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
119 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
120 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
123 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
124 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
125 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
130 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
131 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
132 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
133 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
137 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
138 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
148 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
152 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
153 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
154 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
155 2854911287 Brucella lupini LUP21 Isolate Unclassified
156 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
157 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 0
Isolates 2.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.29
Nodule 0.43
Rhizoplane 2.15
Rhizosphere 93.13
Stem 0
Stem Tuber 0
Unclassified 0.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207668_10147169 3300025972 Bacteria 1819
2 rootH2_10073720 3300003320 Bacteria 11217
3 Ga0065712_10124659 3300005290 Bacteria 1615
4 Ga0065715_10106698 3300005293 Bacteria 2814
5 Ga0070690_100083448 3300005330 Bacteria 2093
6 Ga0070670_100060939 3300005331 Bacteria 3239
7 Ga0070680_100293141 3300005336 Bacteria 1379
8 Ga0070682_100014633 3300005337 Bacteria 4535
9 Ga0070689_100004696 3300005340 Bacteria 9262
10 Ga0070661_100030714 3300005344 Bacteria 3882
11 Ga0070661_100067981 3300005344 Bacteria 2619
12 Ga0070668_100027898 3300005347 Bacteria 4285
13 Ga0070669_100009778 3300005353 Bacteria 6832
14 Ga0070669_100108086 3300005353 Bacteria 2107
15 Ga0070675_100001686 3300005354 Bacteria 16304
16 Ga0070671_100000983 3300005355 Bacteria 20923
17 Ga0070674_100368872 3300005356 Bacteria 1164
18 Ga0070673_100008572 3300005364 Bacteria 6805
19 Ga0070688_100022385 3300005365 Bacteria 3703
20 Ga0070709_10216245 3300005434 Bacteria 1364
21 Ga0070713_100015155 3300005436 Bacteria 5748
22 Ga0070705_100014523 3300005440 Bacteria 4054
23 Ga0070663_100061224 3300005455 Bacteria 2710
24 Ga0070662_100029929 3300005457 Bacteria 3805
25 Ga0070662_100279751 3300005457 Bacteria 1350
26 Ga0070681_10188926 3300005458 Bacteria 1980
27 Ga0068867_100004699 3300005459 Bacteria 9609
28 Ga0070685_10011442 3300005466 Bacteria 4644
29 Ga0070684_100001057 3300005535 Bacteria 19684
30 Ga0070686_100091501 3300005544 Bacteria 2035
31 Ga0070665_100020930 3300005548 Bacteria 6574
32 Ga0070665_100023439 3300005548 Bacteria 6215
33 Ga0070665_100390058 3300005548 Bacteria 1400
34 Ga0068855_100214249 3300005563 Bacteria 2163
35 Ga0070664_100001071 3300005564 Bacteria 21535
36 Ga0068857_100065154 3300005577 Bacteria 3239
37 Ga0070702_100017133 3300005615 Bacteria 3731
38 Ga0070702_100177029 3300005615 Bacteria 1392
39 Ga0068859_100002393 3300005617 Bacteria 19096
40 Ga0068859_100020696 3300005617 Bacteria 6602
41 Ga0068864_100002178 3300005618 Bacteria 16179
42 Ga0068861_100013088 3300005719 Bacteria 5800
43 Ga0068861_100021769 3300005719 Bacteria 4611
44 Ga0068861_100037343 3300005719 Bacteria 3611
45 Ga0068861_100089190 3300005719 Bacteria 2430
46 Ga0068870_10001332 3300005840 Bacteria 9951
47 Ga0068863_100001758 3300005841 Bacteria 21501
48 Ga0068863_100002362 3300005841 Bacteria 18774
49 Ga0068858_100004782 3300005842 Bacteria 13262
50 Ga0068858_100006938 3300005842 Bacteria 11009
51 Ga0068860_100009660 3300005843 Bacteria 9582
52 Ga0068860_100207676 3300005843 Bacteria 1899
53 Ga0068860_100298581 3300005843 Bacteria 1577
54 Ga0068862_100012130 3300005844 Bacteria 7122
55 Ga0068862_100013925 3300005844 Bacteria 6666
56 Ga0068862_100060577 3300005844 Bacteria 3251
57 Ga0081539_10025396 3300005985 Bacteria 3817
58 Ga0075428_100001213 3300006844 Bacteria 27569
59 Ga0075428_100016638 3300006844 Bacteria 8122
60 Ga0075428_100019829 3300006844 Bacteria 7442
61 Ga0075428_100037326 3300006844 Bacteria 5350
62 Ga0075428_100389689 3300006844 Bacteria 1493
63 Ga0075430_100000626 3300006846 Bacteria 26928
64 Ga0075430_100144734 3300006846 Bacteria 1980
65 Ga0075430_100237538 3300006846 Bacteria 1510
66 Ga0075431_100001454 3300006847 Bacteria 21836
67 Ga0075431_100003248 3300006847 Bacteria 15749
68 Ga0075431_100029704 3300006847 Bacteria 5628
69 Ga0075431_100074587 3300006847 Bacteria 3500
70 Ga0075429_100001409 3300006880 Bacteria 19695
71 Ga0075429_100002507 3300006880 Bacteria 15449
72 Ga0068865_100108615 3300006881 Bacteria 2042
73 Ga0068865_100306845 3300006881 Bacteria 1272
74 Ga0097620_100002393 3300006931 Bacteria 19096
75 Ga0097620_100020696 3300006931 Bacteria 6602
76 Ga0111539_10001135 3300009094 Bacteria 35190
77 Ga0111539_10010803 3300009094 Bacteria 11495
78 Ga0111539_10032904 3300009094 Bacteria 6297
79 Ga0111539_10072571 3300009094 Bacteria 4059
80 Ga0111539_10202466 3300009094 Bacteria 2315
81 Ga0114129_10000072 3300009147 Bacteria 92950
82 Ga0105243_10055207 3300009148 Bacteria 3156
83 Ga0105248_10001901 3300009177 Bacteria 23162
84 Ga0105248_10005530 3300009177 Bacteria 13879
85 Ga0105249_10014418 3300009553 Bacteria 6987
86 Ga0105249_10073222 3300009553 Bacteria 3169
87 Ga0157378_10005835 3300013297 Bacteria 10797
88 Ga0157378_10023863 3300013297 Bacteria 5380
89 Ga0163162_10023322 3300013306 Bacteria 6107
90 Ga0163162_10058075 3300013306 Bacteria 3897
91 Ga0163163_10001920 3300014325 Bacteria 17600
92 Ga0163163_10002205 3300014325 Bacteria 16383
93 Ga0163163_10071119 3300014325 Bacteria 3466
94 Ga0157380_10021846 3300014326 Bacteria 4806
95 Ga0157380_10218573 3300014326 Bacteria 1703
96 Ga0157380_10325283 3300014326 Bacteria 1427
97 Ga0157379_10004203 3300014968 Bacteria 12294
98 Ga0157379_10008855 3300014968 Bacteria 8774
99 Ga0183363_1008 3300015690 Bacteria 194027
100 Ga0207642_10222431 3300025899 Bacteria 1056
101 Ga0207688_10050421 3300025901 Bacteria 2330
102 Ga0207688_10208144 3300025901 Bacteria 1174
103 Ga0207707_10351063 3300025912 Bacteria 1271
104 Ga0207660_10158969 3300025917 Bacteria 1742
105 Ga0207652_10326188 3300025921 Bacteria 1386
106 Ga0207681_10020733 3300025923 Bacteria 4170
107 Ga0207644_10061042 3300025931 Bacteria 2729
108 Ga0207706_10022427 3300025933 Bacteria 5667
109 Ga0207706_10170744 3300025933 Bacteria 1911
110 Ga0207709_10036647 3300025935 Bacteria 2908
111 Ga0207670_10022818 3300025936 Bacteria 3885
112 Ga0207669_10022761 3300025937 Bacteria 3335
113 Ga0207704_10075635 3300025938 Bacteria 2154
114 Ga0207711_10003936 3300025941 Bacteria 12776
115 Ga0207711_10010259 3300025941 Bacteria 7778
116 Ga0207689_10130925 3300025942 Bacteria 2065
117 Ga0207679_10008393 3300025945 Bacteria 6579
118 Ga0207651_10052623 3300025960 Bacteria 2777
119 Ga0207712_10108601 3300025961 Bacteria 2077
120 Ga0207668_10042571 3300025972 Bacteria 3076
121 Ga0207668_10238097 3300025972 Bacteria 1471
122 Ga0207703_10051482 3300026035 Bacteria 3337
123 Ga0207678_10069664 3300026067 Bacteria 3016
124 Ga0207641_10005829 3300026088 Bacteria 10453
125 Ga0207648_10055252 3300026089 Bacteria 3466
126 Ga0207676_10002322 3300026095 Bacteria 13651
127 Ga0207674_10013638 3300026116 Bacteria 9001
128 Ga0207675_100002290 3300026118 Bacteria 19014
129 Ga0207675_100078091 3300026118 Bacteria 3101
130 Ga0207675_100127919 3300026118 Bacteria 2407
131 Ga0207675_100206608 3300026118 Bacteria 1887
132 Ga0207428_10029508 3300027907 Bacteria 4545
133 Ga0207428_10240975 3300027907 Bacteria 1351
134 Ga0268266_10021953 3300028379 Bacteria 5440
135 Ga0268266_10029355 3300028379 Bacteria 4676
136 Ga0268265_10000408 3300028380 Bacteria 46038
137 Ga0268265_10091933 3300028380 Bacteria 2427
138 Ga0268264_10080383 3300028381 Bacteria 2783
139 Ga0268264_10340703 3300028381 Bacteria 1424
140 Ga0268264_10578520 3300028381 Bacteria 1104
141 Ga0265338_10003492 3300028800 Bacteria 22066
142 Ga0265331_10000067 3300031250 Bacteria 158073
143 Ga0307513_10339306 3300031456 Bacteria 1254
144 Ga0307509_10000018 3300031507 Bacteria 258998
145 Ga0307408_100007265 3300031548 Bacteria 7327
146 Ga0316575_10019808 3300031665 Bacteria 2576
147 Ga0316576_10086885 3300031727 Bacteria 2326
148 Ga0316578_10071042 3300031728 Bacteria 2061
149 Ga0316578_10143241 3300031728 Bacteria 1439
150 Ga0307416_100113103 3300032002 Bacteria 2398
151 Ga0307416_100257842 3300032002 Bacteria 1702
152 Ga0373958_0018710 3300034819 Bacteria 1259
153 Ga0373932_0076681 3300035112 Bacteria 1048
154 Ga0373946_0177049 3300035171 Bacteria 1010
155 Ga0373931_0049794 3300035691 Bacteria 2227
156 Ga0373927_0020620 3300035695 Bacteria 4322
157 Ga0373927_0026714 3300035695 Bacteria 3773
158 Ga0373937_0113553 3300036401 Bacteria 2520
159 Ga0373937_0530405 3300036401 Bacteria 1118
160 Ga0316584_0008230 3300036712 Bacteria 7177
161 Ga0316584_0022006 3300036712 Bacteria 4644
162 Ga0373925_0032136 3300037068 Bacteria 3861
163 Ga0395899_0001791 3300037312 Bacteria 17799
164 Ga0395899_0013175 3300037312 Bacteria 6324
165 Ga0395899_0146996 3300037312 Unclassified 1673
166 Ga0395900_0060869 3300037418 Bacteria 3883
167 Ga0395900_0132310 3300037418 Bacteria 2556
168 Ga0395898_0135864 3300037466 Bacteria 2354
169 Ga0395905_0002436 3300037471 Bacteria 20618
170 Ga0395905_0225393 3300037471 Bacteria 1754
171 Ga0395901_0014830 3300038443 Bacteria 7917
172 Ga0395901_0065328 3300038443 Bacteria 3788
173 Ga0400483_128561 3300039062 Bacteria 3168
174 Ga0436361_0964530 3300039447 Bacteria 1754
175 Ga0453684_0024906 3300044712 Bacteria 8713
176 Ga0453684_0304640 3300044712 Bacteria 1810
177 Ga0451576_0020339 3300045051 Bacteria 7230
178 Ga0451576_0117343 3300045051 Bacteria 2771
179 Ga0451576_0351624 3300045051 Bacteria 1543
180 Ga0466967_0340428 3300045976 Bacteria 1450
181 Ga0495629_0000003 3300046459 Bacteria 529162
182 Ga0495625_0040580 3300046660 Bacteria 3392
183 Ga0495635_0011450 3300046663 Bacteria 6220
184 Ga0495600_0034922 3300046809 Bacteria 3264
185 Ga0495680_0012529 3300047322 Bacteria 7458
186 Ga0495684_0017825 3300047471 Bacteria 5470
187 Ga0496107_0215708 3300048910 Bacteria 1427
188 Ga0496107_0234069 3300048910 Bacteria 1367
189 Ga0496110_0020425 3300048913 Bacteria 5593
190 Ga0496112_0295022 3300048915 Bacteria 1567
191 Ga0496113_0153925 3300048916 Bacteria 1815
192 Ga0501290_000477 3300049513 Bacteria 6226
193 Ga0501292_000012 3300049515 Bacteria 69398
194 Ga0501034_0344695 3300049571 Bacteria 1419
195 Ga0501071_0255644 3300049587 Bacteria 1323
196 Ga0501072_0253005 3300049588 Bacteria 1403
197 Ga0501224_001490 3300049664 Bacteria 3107
198 Ga0501249_020494 3300049679 Bacteria 1438
199 Ga0501259_002107 3300049688 Bacteria 3276
200 Ga0501261_000115 3300049690 Bacteria 12129
201 Ga0501225_0010525 3300049705 Bacteria 2618
202 Ga0501079_0093507 3300049741 Bacteria 2330
203 Ga0501083_0018416 3300049744 Bacteria 4867
204 Ga0501279_000004 3300049775 Bacteria 175612
205 Ga0501281_00433 3300049777 Bacteria 4105
206 Ga0501283_001651 3300049779 Bacteria 2905
207 Ga0501044_0057345 3300049823 Bacteria 3997
208 nmdc:mga05p37_135_c1 3300050507 Bacteria 68116
209 nmdc:mga09592_17816_c1 3300050508 Bacteria 5820
210 nmdc:mga0qj67_129968_c1 3300050509 Bacteria 2040
211 nmdc:mga0qj67_507_c1 3300050509 Bacteria 26621
212 nmdc:mga06r32_11597_c1 3300050510 Bacteria 7935
213 nmdc:mga06r32_1617_c1 3300050510 Bacteria 20320
214 nmdc:mga06r32_39946_c1 3300050510 Bacteria 4453
215 nmdc:mga06r32_96_c1 3300050510 Bacteria 61629
216 nmdc:mga08y16_11289_c1 3300050511 Bacteria 9386
217 nmdc:mga08y16_39173_c1 3300050511 Bacteria 4973
218 nmdc:mga08y16_6496_c1 3300050511 Bacteria 12260
219 Ga0495619_0008746 3300053085 Bacteria 6403
220 Ga0500643_026311 3300053087 Unclassified 1823
221 Ga0500655_006674 3300053133 Bacteria 2076
222 Ga0500559_0012775 3300053136 Bacteria 3565
223 Ga0501084_0282117 3300054114 Bacteria 1403
224 Ga0501082_0007205 3300060353 Bacteria 9585
225 Ga0501082_0146568 3300060353 Bacteria 2049
226 Ga0530510_0017662 3300061734 Bacteria 5055
227 Ga0530510_0220398 3300061734 Bacteria 1410
228 2523103402 2522572158 Bacteria 6514390
229 2830078374 2830075706 Bacteria 3855215
230 2842335369 2842333319 Bacteria 8899485
231 2854912732 2854911287 Bacteria 5582813
232 2939670788 2939669807 Bacteria 5028511
233 8054564559 8054563764 Bacteria 5592885
234 Ga0207668_10147169
235 rootH2_10073720
236 Ga0065712_10124659
237 Ga0065715_10106698
238 Ga0070690_100083448
239 Ga0070670_100060939
240 Ga0070680_100293141
241 Ga0070682_100014633
242 Ga0070689_100004696
243 Ga0070661_100030714
244 Ga0070661_100067981
245 Ga0070668_100027898
246 Ga0070669_100009778
247 Ga0070669_100108086
248 Ga0070675_100001686
249 Ga0070671_100000983
250 Ga0070674_100368872
251 Ga0070673_100008572
252 Ga0070688_100022385
253 Ga0070709_10216245
254 Ga0070713_100015155
255 Ga0070705_100014523
256 Ga0070663_100061224
257 Ga0070662_100029929
258 Ga0070662_100279751
259 Ga0070681_10188926
260 Ga0068867_100004699
261 Ga0070685_10011442
262 Ga0070684_100001057
263 Ga0070686_100091501
264 Ga0070665_100020930
265 Ga0070665_100023439
266 Ga0070665_100390058
267 Ga0068855_100214249
268 Ga0070664_100001071
269 Ga0068857_100065154
270 Ga0070702_100017133
271 Ga0070702_100177029
272 Ga0068859_100002393
273 Ga0068859_100020696
274 Ga0068864_100002178
275 Ga0068861_100013088
276 Ga0068861_100021769
277 Ga0068861_100037343
278 Ga0068861_100089190
279 Ga0068870_10001332
280 Ga0068863_100001758
281 Ga0068863_100002362
282 Ga0068858_100004782
283 Ga0068858_100006938
284 Ga0068860_100009660
285 Ga0068860_100207676
286 Ga0068860_100298581
287 Ga0068862_100012130
288 Ga0068862_100013925
289 Ga0068862_100060577
290 Ga0081539_10025396
291 Ga0075428_100001213
292 Ga0075428_100016638
293 Ga0075428_100019829
294 Ga0075428_100037326
295 Ga0075428_100389689
296 Ga0075430_100000626
297 Ga0075430_100144734
298 Ga0075430_100237538
299 Ga0075431_100001454
300 Ga0075431_100003248
301 Ga0075431_100029704
302 Ga0075431_100074587
303 Ga0075429_100001409
304 Ga0075429_100002507
305 Ga0068865_100108615
306 Ga0068865_100306845
307 Ga0097620_100002393
308 Ga0097620_100020696
309 Ga0111539_10001135
310 Ga0111539_10010803
311 Ga0111539_10032904
312 Ga0111539_10072571
313 Ga0111539_10202466
314 Ga0114129_10000072
315 Ga0105243_10055207
316 Ga0105248_10001901
317 Ga0105248_10005530
318 Ga0105249_10014418
319 Ga0105249_10073222
320 Ga0157378_10005835
321 Ga0157378_10023863
322 Ga0163162_10023322
323 Ga0163162_10058075
324 Ga0163163_10001920
325 Ga0163163_10002205
326 Ga0163163_10071119
327 Ga0157380_10021846
328 Ga0157380_10218573
329 Ga0157380_10325283
330 Ga0157379_10004203
331 Ga0157379_10008855
332 Ga0183363_1008
333 Ga0207642_10222431
334 Ga0207688_10050421
335 Ga0207688_10208144
336 Ga0207707_10351063
337 Ga0207660_10158969
338 Ga0207652_10326188
339 Ga0207681_10020733
340 Ga0207644_10061042
341 Ga0207706_10022427
342 Ga0207706_10170744
343 Ga0207709_10036647
344 Ga0207670_10022818
345 Ga0207669_10022761
346 Ga0207704_10075635
347 Ga0207711_10003936
348 Ga0207711_10010259
349 Ga0207689_10130925
350 Ga0207679_10008393
351 Ga0207651_10052623
352 Ga0207712_10108601
353 Ga0207668_10042571
354 Ga0207668_10238097
355 Ga0207703_10051482
356 Ga0207678_10069664
357 Ga0207641_10005829
358 Ga0207648_10055252
359 Ga0207676_10002322
360 Ga0207674_10013638
361 Ga0207675_100002290
362 Ga0207675_100078091
363 Ga0207675_100127919
364 Ga0207675_100206608
365 Ga0207428_10029508
366 Ga0207428_10240975
367 Ga0268266_10021953
368 Ga0268266_10029355
369 Ga0268265_10000408
370 Ga0268265_10091933
371 Ga0268264_10080383
372 Ga0268264_10340703
373 Ga0268264_10578520
374 Ga0265338_10003492
375 Ga0265331_10000067
376 Ga0307513_10339306
377 Ga0307509_10000018
378 Ga0307408_100007265
379 Ga0316575_10019808
380 Ga0316576_10086885
381 Ga0316578_10071042
382 Ga0316578_10143241
383 Ga0307416_100113103
384 Ga0307416_100257842
385 Ga0373958_0018710
386 Ga0373932_0076681
387 Ga0373946_0177049
388 Ga0373931_0049794
389 Ga0373927_0020620
390 Ga0373927_0026714
391 Ga0373937_0113553
392 Ga0373937_0530405
393 Ga0316584_0008230
394 Ga0316584_0022006
395 Ga0373925_0032136
396 Ga0395899_0001791
397 Ga0395899_0013175
398 Ga0395899_0146996
399 Ga0395900_0060869
400 Ga0395900_0132310
401 Ga0395898_0135864
402 Ga0395905_0002436
403 Ga0395905_0225393
404 Ga0395901_0014830
405 Ga0395901_0065328
406 Ga0400483_128561
407 Ga0436361_0964530
408 Ga0453684_0024906
409 Ga0453684_0304640
410 Ga0451576_0020339
411 Ga0451576_0117343
412 Ga0451576_0351624
413 Ga0466967_0340428
414 Ga0495629_0000003
415 Ga0495625_0040580
416 Ga0495635_0011450
417 Ga0495600_0034922
418 Ga0495680_0012529
419 Ga0495684_0017825
420 Ga0496107_0215708
421 Ga0496107_0234069
422 Ga0496110_0020425
423 Ga0496112_0295022
424 Ga0496113_0153925
425 Ga0501290_000477
426 Ga0501292_000012
427 Ga0501034_0344695
428 Ga0501071_0255644
429 Ga0501072_0253005
430 Ga0501224_001490
431 Ga0501249_020494
432 Ga0501259_002107
433 Ga0501261_000115
434 Ga0501225_0010525
435 Ga0501079_0093507
436 Ga0501083_0018416
437 Ga0501279_000004
438 Ga0501281_00433
439 Ga0501283_001651
440 Ga0501044_0057345
441 nmdc:mga05p37_135_c1
442 nmdc:mga09592_17816_c1
443 nmdc:mga0qj67_129968_c1
444 nmdc:mga0qj67_507_c1
445 nmdc:mga06r32_11597_c1
446 nmdc:mga06r32_1617_c1
447 nmdc:mga06r32_39946_c1
448 nmdc:mga06r32_96_c1
449 nmdc:mga08y16_11289_c1
450 nmdc:mga08y16_39173_c1
451 nmdc:mga08y16_6496_c1
452 Ga0495619_0008746
453 Ga0500643_026311
454 Ga0500655_006674
455 Ga0500559_0012775
456 Ga0501084_0282117
457 Ga0501082_0007205
458 Ga0501082_0146568
459 Ga0530510_0017662
460 Ga0530510_0220398
461 2523103402
462 2830078374
463 2842335369
464 2854912732
465 2939670788
466 8054564559

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

197

337

0.93

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

72

156

0.93

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

229

369

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.9816 1 323
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.9786 1 323
3jyl-assembly1.cif.gz_A crystal structures of pseudomonas syringae pv. tomato dc3000 quinone oxidoreductase 0.9776 1 323
3jyl-assembly1.cif.gz_A crystal structures of pseudomonas syringae pv. tomato dc3000 quinone oxidoreductase 0.9746 1 323
4rvu-assembly2.cif.gz_C the native structure of mycobacterial rv1454c complexed with nadph 0.9713 3 323
ID Description Score Start End Superfamily
af_I1LVH0_176_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9972 124 268 3.40.50.720
af_Q336S6_1_326_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9872 1 322 3.90.180.10
af_A0A0R0I1N1_1_153_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9839 1 135 3.90.180.10
af_I1LVH0_176_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9835 124 268 3.40.50.720
af_P28304_1_127_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9834 1 125 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A7U7GCB8-F1-model_v4 Quinone oxidoreductase, NADPH-dependent (EC 1.6.5.5) 0.9931 1 323 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A536V2R0-F1-model_v4 Zinc-binding dehydrogenase 0.9909 137 323 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A528FI11-F1-model_v4 Quinone oxidoreductase 0.9903 108 323 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A5B7AB61-F1-model_v4 Putative quinone oxidoreductase isoform X2 (EC 1.6.5.5) 0.9901 123 323 GO:0003960
GO:0005829
GO:0035925
GO:0070402
AF-A0A7U7GCB8-F1-model_v4 Quinone oxidoreductase, NADPH-dependent (EC 1.6.5.5) 0.9901 1 323 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402

Map