F345926

General Info

Members Datasets Scaffolds Average Seq Length
233 163 224 463

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100004469|Ga0068860_10000446912
Length 487
Sequence MVGCAVAKHCRGHPTLAPAHAPPPYRGMTISPLPPAILALGDAFYDPVDAANFPETRLRFRNDRAAAAVALDGLSDADWVRHFGRFDPLPGSLQRPLALRYHGHQFRVYNPDIGDGRGFLFAQMRDGAGRLMDLGTKGSGQTPWSRFGDGRLTLKGGVREVLATEMLEALGVDTSRTFSLIETGEQLHRGDEPSPTRSAVLVRLSHGHIRIGTFQRLAALRDVASMHRLIDYCLVNFFGEEPGADGAARLIGHVVAGAARLAAGYMAAGFVHGVLNTDNINITTESFDYGPWRFTPEWDPAFTAAYFDQTGLYAYGRQAEAIHWNVVQLAIALRQVAEADVLVPHLDGFGAAFEAAIVAHMLWRLGVVPRGEQPDLALVQAIEQVLAARTVTIDRFFFDWAGGSLRGPSPADAVYASEAFAPFHAAIAGYAPARGLDHPYWSDHGPCSMHIDEVESLWSRIAGEDDWSGFETKVASIRRMGEALRAA

Samples

Sample ID Description Type Environment
1 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
2 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
3 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
4 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
5 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
6 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
7 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
8 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
11 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
51 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
88 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
89 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
90 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
102 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
103 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
104 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
105 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
106 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
113 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
114 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
115 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
118 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
119 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
120 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
121 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
122 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
123 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
136 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
137 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
138 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
139 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
140 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
141 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
142 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
143 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
144 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
145 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
146 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
147 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
151 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
152 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
153 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
154 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
155 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
156 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
157 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
158 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
159 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
160 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
161 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
162 8002060224 Methylocystis sp. Sn-Cys Isolate Unclassified
163 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.71
Metatranscriptomes 0.43
Isolates 3.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.3
Nodule 0.43
Rhizoplane 3.86
Rhizosphere 80.69
Stem 0
Stem Tuber 0
Unclassified 7.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24752J21851_1001238 3300001976 Bacteria 3465
2 JGI24752J21851_1001781 3300001976 Bacteria 2886
3 JGI25165J46597_1000012 3300003214 Bacteria 421074
4 Ga0065704_10008828 3300005289 Bacteria 3322
5 Ga0065704_10086160 3300005289 Bacteria 3148
6 Ga0065707_10097428 3300005295 Bacteria 3175
7 Ga0070658_10000001 3300005327 Bacteria 856789
8 Ga0070670_100000051 3300005331 Bacteria 131351
9 Ga0070680_100002275 3300005336 Bacteria 14198
10 Ga0068868_100000077 3300005338 Bacteria 58130
11 Ga0070660_100000681 3300005339 Bacteria 22460
12 Ga0070660_100001334 3300005339 Bacteria 16775
13 Ga0070660_100002905 3300005339 Bacteria 11793
14 Ga0070661_100000114 3300005344 Bacteria 67216
15 Ga0070692_10029833 3300005345 Bacteria 2722
16 Ga0070692_10045530 3300005345 Bacteria 2263
17 Ga0070668_100001336 3300005347 Bacteria 17622
18 Ga0070668_100103826 3300005347 Bacteria 2255
19 Ga0070669_100007849 3300005353 Bacteria 7627
20 Ga0070669_100016403 3300005353 Bacteria 5284
21 Ga0070675_100090755 3300005354 Bacteria 2559
22 Ga0070659_100000021 3300005366 Bacteria 154212
23 Ga0070659_100000437 3300005366 Bacteria 31405
24 Ga0070659_100182547 3300005366 Bacteria 1722
25 Ga0070659_100230003 3300005366 Bacteria 1532
26 Ga0070667_100000062 3300005367 Bacteria 143729
27 Ga0070667_100000222 3300005367 Bacteria 65587
28 Ga0070685_10044952 3300005466 Bacteria 2530
29 Ga0070679_100000002 3300005530 Bacteria 312066
30 Ga0070672_100025320 3300005543 Bacteria 4398
31 Ga0070672_100171145 3300005543 Bacteria 1806
32 Ga0070686_100001465 3300005544 Bacteria 13323
33 Ga0070665_100000011 3300005548 Bacteria 525539
34 Ga0070665_100000287 3300005548 Bacteria 79790
35 Ga0068859_100260665 3300005617 Bacteria 1825
36 Ga0068864_100000004 3300005618 Bacteria 489341
37 Ga0068864_100076076 3300005618 Bacteria 2932
38 Ga0068861_100012369 3300005719 Bacteria 5951
39 Ga0068863_100000002 3300005841 Bacteria 489510
40 Ga0068863_100000054 3300005841 Bacteria 124495
41 Ga0068858_100005885 3300005842 Bacteria 11971
42 Ga0068858_100151735 3300005842 Bacteria 2179
43 Ga0068860_100004469 3300005843 Bacteria 14266
44 Ga0068862_100000002 3300005844 Bacteria 489341
45 Ga0068862_100000063 3300005844 Bacteria 124662
46 Ga0097620_100260659 3300006931 Bacteria 1825
47 Ga0105251_10001952 3300009011 Bacteria 16857
48 Ga0105240_10000959 3300009093 Bacteria 51453
49 Ga0105240_10043207 3300009093 Bacteria 5736
50 Ga0105245_10022875 3300009098 Bacteria 5484
51 Ga0105245_10024266 3300009098 Bacteria 5325
52 Ga0105245_10030495 3300009098 Bacteria 4768
53 Ga0105247_10005955 3300009101 Bacteria 7603
54 Ga0105247_10021994 3300009101 Bacteria 3838
55 Ga0105248_10000010 3300009177 Bacteria 344314
56 Ga0105248_10008543 3300009177 Bacteria 11242
57 Ga0105248_10064706 3300009177 Bacteria 4105
58 Ga0105248_10075137 3300009177 Bacteria 3798
59 Ga0105237_10007720 3300009545 Bacteria 11746
60 Ga0105237_10291123 3300009545 Bacteria 1636
61 Ga0105238_10185975 3300009551 Bacteria 2054
62 Ga0105249_10000041 3300009553 Bacteria 195999
63 Ga0105249_10000103 3300009553 Bacteria 118397
64 Ga0105148_100027 3300009978 Bacteria 21393
65 Ga0105239_10000156 3300010375 Bacteria 98400
66 Ga0157371_10040274 3300013102 Bacteria 3337
67 Ga0157375_10002742 3300013308 Bacteria 15223
68 Ga0206356_11616420 3300020070 Bacteria 4197
69 Ga0213876_10005611 3300021384 Bacteria 6888
70 Ga0213875_10000229 3300021388 Bacteria 56654
71 Ga0209233_1000058 3300025261 Bacteria 421872
72 Ga0207713_1004097 3300025735 Bacteria 9602
73 Ga0207710_10012783 3300025900 Bacteria 3535
74 Ga0207680_10044736 3300025903 Bacteria 2606
75 Ga0207705_10000002 3300025909 Bacteria 2046852
76 Ga0207705_10182045 3300025909 Bacteria 1586
77 Ga0207695_10000521 3300025913 Bacteria 81496
78 Ga0207671_10000607 3300025914 Bacteria 47542
79 Ga0207657_10000228 3300025919 Bacteria 58838
80 Ga0207657_10005429 3300025919 Bacteria 13318
81 Ga0207657_10023372 3300025919 Bacteria 5756
82 Ga0207657_10034298 3300025919 Bacteria 4566
83 Ga0207649_10000011 3300025920 Bacteria 266219
84 Ga0207652_10000001 3300025921 Bacteria 1006643
85 Ga0207652_10000002 3300025921 Bacteria 878035
86 Ga0207650_10000199 3300025925 Bacteria 69216
87 Ga0207659_10023139 3300025926 Bacteria 4144
88 Ga0207659_10155202 3300025926 Bacteria 1791
89 Ga0207687_10008492 3300025927 Bacteria 6714
90 Ga0207687_10082617 3300025927 Bacteria 2324
91 Ga0207690_10000030 3300025932 Bacteria 156832
92 Ga0207691_10083133 3300025940 Bacteria 2875
93 Ga0207711_10000035 3300025941 Bacteria 177223
94 Ga0207711_10010157 3300025941 Bacteria 7817
95 Ga0207711_10029094 3300025941 Bacteria 4657
96 Ga0207712_10000069 3300025961 Bacteria 127318
97 Ga0207712_10000580 3300025961 Bacteria 29652
98 Ga0207668_10000924 3300025972 Bacteria 17639
99 Ga0207668_10002756 3300025972 Bacteria 10266
100 Ga0207658_10000039 3300025986 Bacteria 143707
101 Ga0207658_10000479 3300025986 Bacteria 36981
102 Ga0207677_10000027 3300026023 Bacteria 125785
103 Ga0207703_10002552 3300026035 Bacteria 15728
104 Ga0207639_10097916 3300026041 Bacteria 2363
105 Ga0207678_10011057 3300026067 Bacteria 7929
106 Ga0207678_10144103 3300026067 Bacteria 2033
107 Ga0207641_10000002 3300026088 Bacteria 981004
108 Ga0207641_10000095 3300026088 Bacteria 124498
109 Ga0207641_10009629 3300026088 Bacteria 7965
110 Ga0207676_10000005 3300026095 Bacteria 698744
111 Ga0207676_10063699 3300026095 Bacteria 2929
112 Ga0207675_100021165 3300026118 Bacteria 6059
113 Ga0207698_10113746 3300026142 Bacteria 2275
114 Ga0268266_10000058 3300028379 Bacteria 277346
115 Ga0268266_10000819 3300028379 Bacteria 40698
116 Ga0268265_10000003 3300028380 Bacteria 949201
117 Ga0268265_10000055 3300028380 Bacteria 158947
118 Ga0268264_10000381 3300028381 Bacteria 64651
119 Ga0268264_10006004 3300028381 Bacteria 10278
120 Ga0265328_10000025 3300031239 Bacteria 118295
121 Ga0265331_10003606 3300031250 Bacteria 9913
122 Ga0307513_10036387 3300031456 Bacteria 5492
123 Ga0307408_100014405 3300031548 Bacteria 5252
124 Ga0307408_100084546 3300031548 Bacteria 2380
125 Ga0307508_10000479 3300031616 Bacteria 48265
126 Ga0307405_10009290 3300031731 Bacteria 5033
127 Ga0307405_10040553 3300031731 Bacteria 2820
128 Ga0307413_10018495 3300031824 Bacteria 3658
129 Ga0307410_10079645 3300031852 Bacteria 2296
130 Ga0307406_10002286 3300031901 Bacteria 10426
131 Ga0307412_10000247 3300031911 Bacteria 35011
132 Ga0307412_10005602 3300031911 Bacteria 7051
133 Ga0307412_10023257 3300031911 Bacteria 3810
134 Ga0307409_100081154 3300031995 Bacteria 2620
135 Ga0307409_100148831 3300031995 Bacteria 2029
136 Ga0307416_100156496 3300032002 Bacteria 2099
137 Ga0307411_10026959 3300032005 Bacteria 3468
138 Ga0307411_10086279 3300032005 Bacteria 2177
139 Ga0395905_0001817 3300037471 Bacteria 24687
140 Ga0436364_0530420 3300037853 Bacteria 132998
141 Ga0237819_00832 3300038705 Bacteria 9739
142 Ga0436365_1078393 3300039437 Bacteria 20913
143 Ga0466968_0031013 3300044735 Bacteria 2216
144 Ga0495638_0047241 3300046460 Bacteria 2700
145 Ga0495650_0002647 3300046471 Bacteria 13986
146 Ga0495585_0050699 3300046492 Bacteria 2302
147 Ga0495625_0001297 3300046660 Bacteria 31374
148 Ga0495659_0018616 3300046664 Bacteria 2316
149 Ga0495669_0009559 3300046684 Bacteria 4092
150 Ga0495686_0001453 3300047472 Bacteria 25811
151 Ga0495686_0004143 3300047472 Bacteria 12066
152 Ga0495686_0020305 3300047472 Bacteria 4430
153 Ga0496101_0014378 3300048904 Bacteria 5318
154 Ga0496102_0027205 3300048905 Bacteria 5108
155 Ga0496107_0015173 3300048910 Bacteria 5397
156 Ga0496108_0026301 3300048911 Bacteria 4799
157 Ga0496109_0027708 3300048912 Bacteria 5062
158 Ga0496110_0015428 3300048913 Bacteria 6358
159 Ga0496111_0030430 3300048914 Bacteria 3838
160 Ga0496113_0004996 3300048916 Bacteria 8221
161 Ga0496117_0037057 3300048920 Bacteria 3638
162 Ga0496118_0000801 3300048921 Bacteria 50225
163 Ga0496118_0001927 3300048921 Bacteria 29427
164 Ga0496119_0054174 3300048922 Bacteria 2444
165 Ga0496121_0006256 3300048924 Bacteria 14903
166 Ga0496124_0058874 3300048927 Bacteria 3229
167 Ga0496125_0078312 3300048928 Bacteria 2542
168 Ga0501290_000239 3300049513 Bacteria 9080
169 Ga0501290_001850 3300049513 Bacteria 2801
170 Ga0501292_000008 3300049515 Bacteria 83748
171 Ga0501294_000117 3300049517 Bacteria 9036
172 Ga0501031_0019316 3300049568 Bacteria 4438
173 Ga0501032_0000075 3300049569 Bacteria 84153
174 Ga0501033_0000216 3300049570 Bacteria 55449
175 Ga0501033_0021762 3300049570 Bacteria 4839
176 Ga0501034_0000476 3300049571 Bacteria 65960
177 Ga0501034_0007780 3300049571 Bacteria 11404
178 Ga0501034_0027308 3300049571 Bacteria 5807
179 Ga0501034_0073824 3300049571 Bacteria 3419
180 Ga0501036_0002914 3300049572 Bacteria 13583
181 Ga0501037_0000021 3300049573 Bacteria 150037
182 Ga0501038_0000032 3300049574 Bacteria 131432
183 Ga0501039_0000025 3300049575 Bacteria 152236
184 Ga0501043_0000453 3300049579 Bacteria 36478
185 Ga0501047_0187637 3300049581 Bacteria 1932
186 Ga0501047_0256871 3300049581 Bacteria 1595
187 Ga0501070_0246922 3300049586 Bacteria 1460
188 Ga0501223_000004 3300049663 Bacteria 141027
189 Ga0501223_001007 3300049663 Bacteria 6654
190 Ga0501223_004275 3300049663 Bacteria 3067
191 Ga0501224_000001 3300049664 Bacteria 308131
192 Ga0501224_001350 3300049664 Bacteria 3243
193 Ga0501233_000100 3300049668 Bacteria 11484
194 Ga0501235_001899 3300049669 Bacteria 4466
195 Ga0501257_000046 3300049686 Bacteria 34691
196 Ga0501259_001892 3300049688 Bacteria 3463
197 Ga0501261_000030 3300049690 Bacteria 32000
198 Ga0501225_0000003 3300049705 Bacteria 141070
199 Ga0501225_0000185 3300049705 Bacteria 19439
200 Ga0501225_0002873 3300049705 Bacteria 5287
201 Ga0501234_000756 3300049707 Bacteria 5013
202 Ga0501279_000002 3300049775 Bacteria 205937
203 Ga0501280_000010 3300049776 Bacteria 63153
204 Ga0501280_002446 3300049776 Bacteria 3088
205 Ga0501281_00100 3300049777 Bacteria 10298
206 Ga0501283_001765 3300049779 Bacteria 2807
207 Ga0501035_0000085 3300049822 Bacteria 116189
208 Ga0501044_0008329 3300049823 Bacteria 11361
209 Ga0501226_000043 3300049853 Bacteria 58106
210 Ga0500643_000081 3300053087 Bacteria 101681
211 Ga0500643_020062 3300053087 Bacteria 2192
212 Ga0500592_000118 3300053116 Bacteria 17080
213 Ga0500597_003969 3300053120 Bacteria 4495
214 Ga0500658_0000581 3300053134 Bacteria 15401
215 Ga0500559_0008044 3300053136 Bacteria 4642
216 Ga0500604_0000048 3300053151 Bacteria 45446
217 Ga0500616_0000435 3300053153 Bacteria 55171
218 Ga0500616_0016557 3300053153 Bacteria 4193
219 Ga0500616_0092771 3300053153 Bacteria 1492
220 Ga0500624_000044 3300053157 Bacteria 90094
221 Ga0500624_000053 3300053157 Bacteria 74086
222 Ga0500627_0000799 3300053158 Bacteria 8399
223 Ga0500637_0000008 3300053178 Bacteria 89244
224 Ga0500661_003471 3300055283 Bacteria 2956

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049688 Ga0501259_001892 Ga0501259_001892_457_1893 391
2 iso_pu_bacteria 2513237351 2514585834 394
3 3300009978 Ga0105148_100027 Ga0105148_10002716 402
4 3300031852 Ga0307410_10079645 Ga0307410_100796452 417
5 iso_pu_bacteria 2861691609 2861694103 435
6 3300005719 Ga0068861_100012369 Ga0068861_1000123695 443
7 3300026118 Ga0207675_100021165 Ga0207675_1000211655 443
8 3300049779 Ga0501283_001765 Ga0501283_001765_1247_2581 443
9 3300005842 Ga0068858_100151735 Ga0068858_1001517352 444
10 iso_pu_bacteria 2879163058 2879164489 445
11 3300025941 Ga0207711_10010157 Ga0207711_100101575 446
12 3300037471 Ga0395905_0001817 Ga0395905_0001817_11091_12443 446
13 3300005366 Ga0070659_100182547 Ga0070659_1001825472 448
14 3300025909 Ga0207705_10182045 Ga0207705_101820451 448
15 3300025919 Ga0207657_10023372 Ga0207657_100233723 448
16 3300020070 Ga0206356_11616420 Ga0206356_116164203 449
17 3300026067 Ga0207678_10011057 Ga0207678_100110575 449
18 iso_pu_bacteria 2599185354 2600200732 449
19 iso_pu_bacteria 2751185897 2753765132 449
20 3300005339 Ga0070660_100000681 Ga0070660_1000006817 450
21 3300025919 Ga0207657_10005429 Ga0207657_100054299 450
22 3300028381 Ga0268264_10006004 Ga0268264_100060043 450
23 3300046664 Ga0495659_0018616 Ga0495659_0018616_784_2151 450
24 3300046684 Ga0495669_0009559 Ga0495669_0009559_1200_2567 450
25 3300005548 Ga0070665_100000287 Ga0070665_10000028765 451
26 3300028379 Ga0268266_10000819 Ga0268266_1000081920 451
27 iso_pu_bacteria 8057101203 8057101615 451
28 3300005327 Ga0070658_10000001 Ga0070658_10000001644 452
29 3300005543 Ga0070672_100025320 Ga0070672_1000253202 452
30 3300025909 Ga0207705_10000002 Ga0207705_100000021237 452
31 3300046660 Ga0495625_0001297 Ga0495625_0001297_17507_18892 452
32 3300048910 Ga0496107_0015173 Ga0496107_0015173_2613_3992 452
33 3300048913 Ga0496110_0015428 Ga0496110_0015428_3131_4510 452
34 3300048914 Ga0496111_0030430 Ga0496111_0030430_1163_2542 452
35 3300005338 Ga0068868_100000077 Ga0068868_10000007758 453
36 3300005339 Ga0070660_100001334 Ga0070660_10000133411 453
37 3300005347 Ga0070668_100103826 Ga0070668_1001038261 453
38 3300005354 Ga0070675_100090755 Ga0070675_1000907552 453
39 3300005366 Ga0070659_100000021 Ga0070659_100000021105 453
40 3300009093 Ga0105240_10000959 Ga0105240_100009593 453
41 3300009093 Ga0105240_10043207 Ga0105240_100432073 453
42 3300009098 Ga0105245_10024266 Ga0105245_100242663 453
43 3300009098 Ga0105245_10030495 Ga0105245_100304953 453
44 3300009545 Ga0105237_10007720 Ga0105237_100077208 453
45 3300010375 Ga0105239_10000156 Ga0105239_1000015645 453
46 3300025913 Ga0207695_10000521 Ga0207695_1000052127 453
47 3300025914 Ga0207671_10000607 Ga0207671_1000060727 453
48 3300025919 Ga0207657_10000228 Ga0207657_1000022858 453
49 3300025926 Ga0207659_10023139 Ga0207659_100231392 453
50 3300025927 Ga0207687_10082617 Ga0207687_100826172 453
51 3300025932 Ga0207690_10000030 Ga0207690_10000030108 453
52 3300026023 Ga0207677_10000027 Ga0207677_10000027103 453
53 3300031911 Ga0307412_10023257 Ga0307412_100232572 453
54 3300032002 Ga0307416_100156496 Ga0307416_1001564962 453
55 3300048924 Ga0496121_0006256 Ga0496121_0006256_10492_11856 453
56 3300053087 Ga0500643_020062 Ga0500643_020062_551_1912 453
57 3300031548 Ga0307408_100084546 Ga0307408_1000845462 454
58 3300031731 Ga0307405_10040553 Ga0307405_100405533 454
59 3300031824 Ga0307413_10018495 Ga0307413_100184952 454
60 3300032005 Ga0307411_10086279 Ga0307411_100862792 454
61 3300003214 JGI25165J46597_1000012 JGI25165J46597_1000012216 455
62 3300005548 Ga0070665_100000011 Ga0070665_100000011465 455
63 3300005842 Ga0068858_100005885 Ga0068858_1000058855 455
64 3300009098 Ga0105245_10022875 Ga0105245_100228752 455
65 3300009551 Ga0105238_10185975 Ga0105238_101859751 455
66 3300025261 Ga0209233_1000058 Ga0209233_1000058201 455
67 3300025927 Ga0207687_10008492 Ga0207687_100084923 455
68 3300026035 Ga0207703_10002552 Ga0207703_100025529 455
69 3300026088 Ga0207641_10009629 Ga0207641_100096295 455
70 3300028379 Ga0268266_10000058 Ga0268266_1000005866 455
71 3300031616 Ga0307508_10000479 Ga0307508_1000047947 455
72 3300038705 Ga0237819_00832 Ga0237819_00832_2522_3895 455
73 3300046492 Ga0495585_0050699 Ga0495585_0050699_450_1817 455
74 3300048928 Ga0496125_0078312 Ga0496125_0078312_884_2254 455
75 3300053151 Ga0500604_0000048 Ga0500604_0000048_30912_32303 455
76 3300053153 Ga0500616_0000435 Ga0500616_0000435_44634_46010 455
77 3300013102 Ga0157371_10040274 Ga0157371_100402742 456
78 3300021384 Ga0213876_10005611 Ga0213876_100056112 456
79 3300039437 Ga0436365_1078393 Ga0436365_1078393_18436_19821 456
80 3300047472 Ga0495686_0020305 Ga0495686_0020305_2962_4332 456
81 3300053134 Ga0500658_0000581 Ga0500658_0000581_3812_5212 456
82 3300005543 Ga0070672_100171145 Ga0070672_1001711452 457
83 3300005618 Ga0068864_100076076 Ga0068864_1000760762 457
84 3300009177 Ga0105248_10008543 Ga0105248_100085438 457
85 3300013308 Ga0157375_10002742 Ga0157375_100027424 457
86 3300025926 Ga0207659_10155202 Ga0207659_101552022 457
87 3300025940 Ga0207691_10083133 Ga0207691_100831332 457
88 3300025941 Ga0207711_10029094 Ga0207711_100290942 457
89 3300026095 Ga0207676_10063699 Ga0207676_100636992 457
90 3300026142 Ga0207698_10113746 Ga0207698_101137462 457
91 3300047472 Ga0495686_0001453 Ga0495686_0001453_4042_5436 457
92 3300049586 Ga0501070_0246922 Ga0501070_0246922_42_1448 457
93 3300053153 Ga0500616_0016557 Ga0500616_0016557_2008_3384 457
94 iso_pu_bacteria 2996336353 2996339052 457
95 iso_pu_bacteria 3003665799 3003668054 457
96 3300044735 Ga0466968_0031013 Ga0466968_0031013_72_1466 458
97 3300049663 Ga0501223_000004 Ga0501223_000004_12978_14375 458
98 3300049705 Ga0501225_0000003 Ga0501225_0000003_126450_127847 458
99 3300053157 Ga0500624_000053 Ga0500624_000053_23248_24642 458
100 iso_pu_bacteria 8002060224 8002062054 458
101 3300005289 Ga0065704_10008828 Ga0065704_100088281 459
102 3300005295 Ga0065707_10097428 Ga0065707_100974283 459
103 3300005345 Ga0070692_10029833 Ga0070692_100298333 459
104 3300005345 Ga0070692_10045530 Ga0070692_100455302 459
105 3300005353 Ga0070669_100007849 Ga0070669_1000078496 459
106 3300005366 Ga0070659_100000437 Ga0070659_10000043734 459
107 3300005466 Ga0070685_10044952 Ga0070685_100449522 459
108 3300005843 Ga0068860_100004469 Ga0068860_10000446912 459
109 3300005844 Ga0068862_100000063 Ga0068862_10000006336 459
110 3300028380 Ga0268265_10000055 Ga0268265_10000055124 459
111 3300028381 Ga0268264_10000381 Ga0268264_1000038159 459
112 3300031995 Ga0307409_100081154 Ga0307409_1000811542 459
113 3300048905 Ga0496102_0027205 Ga0496102_0027205_3475_4869 459
114 3300048911 Ga0496108_0026301 Ga0496108_0026301_2125_3519 459
115 3300048912 Ga0496109_0027708 Ga0496109_0027708_992_2386 459
116 3300048916 Ga0496113_0004996 Ga0496113_0004996_1035_2429 459
117 3300049571 Ga0501034_0007780 Ga0501034_0007780_1935_3353 459
118 3300053120 Ga0500597_003969 Ga0500597_003969_3052_4434 459
119 3300053157 Ga0500624_000044 Ga0500624_000044_13823_15205 459
120 3300053178 Ga0500637_0000008 Ga0500637_0000008_13832_15214 459
121 3300031548 Ga0307408_100014405 Ga0307408_1000144053 460
122 3300031731 Ga0307405_10009290 Ga0307405_100092902 460
123 3300031911 Ga0307412_10000247 Ga0307412_1000024713 460
124 3300031995 Ga0307409_100148831 Ga0307409_1001488313 460
125 3300032005 Ga0307411_10026959 Ga0307411_100269592 460
126 3300005347 Ga0070668_100001336 Ga0070668_10000133617 461
127 3300005353 Ga0070669_100016403 Ga0070669_1000164033 461
128 3300005367 Ga0070667_100000062 Ga0070667_100000062128 461
129 3300005841 Ga0068863_100000054 Ga0068863_100000054115 461
130 3300025903 Ga0207680_10044736 Ga0207680_100447362 461
131 3300025972 Ga0207668_10000924 Ga0207668_100009244 461
132 3300025986 Ga0207658_10000039 Ga0207658_100000393 461
133 3300026088 Ga0207641_10000095 Ga0207641_100000955 461
134 3300046471 Ga0495650_0002647 Ga0495650_0002647_48_1448 461
135 3300049571 Ga0501034_0027308 Ga0501034_0027308_2223_3620 461
136 3300049571 Ga0501034_0073824 Ga0501034_0073824_823_2259 461
137 3300049581 Ga0501047_0187637 Ga0501047_0187637_315_1751 461
138 3300049663 Ga0501223_001007 Ga0501223_001007_3071_4468 461
139 3300049664 Ga0501224_000001 Ga0501224_000001_258823_260220 461
140 3300049668 Ga0501233_000100 Ga0501233_000100_3365_4762 461
141 3300049669 Ga0501235_001899 Ga0501235_001899_2259_3656 461
142 3300049705 Ga0501225_0000185 Ga0501225_0000185_15618_17015 461
143 3300049707 Ga0501234_000756 Ga0501234_000756_1369_2766 461
144 3300049853 Ga0501226_000043 Ga0501226_000043_47912_49309 461
145 3300053087 Ga0500643_000081 Ga0500643_000081_78700_80103 461
146 3300053136 Ga0500559_0008044 Ga0500559_0008044_437_1840 461
147 3300055283 Ga0500661_003471 Ga0500661_003471_530_1933 461
148 3300005336 Ga0070680_100002275 Ga0070680_1000022754 462
149 3300005339 Ga0070660_100002905 Ga0070660_1000029052 462
150 3300005344 Ga0070661_100000114 Ga0070661_10000011460 462
151 3300005530 Ga0070679_100000002 Ga0070679_10000000214 462
152 3300025919 Ga0207657_10034298 Ga0207657_100342984 462
153 3300025920 Ga0207649_10000011 Ga0207649_100000112 462
154 3300025921 Ga0207652_10000001 Ga0207652_10000001482 462
155 3300025921 Ga0207652_10000002 Ga0207652_10000002246 462
156 3300031239 Ga0265328_10000025 Ga0265328_1000002572 462
157 3300031250 Ga0265331_10003606 Ga0265331_1000360611 462
158 3300049568 Ga0501031_0019316 Ga0501031_0019316_363_1790 462
159 3300049569 Ga0501032_0000075 Ga0501032_0000075_9336_10763 462
160 3300049570 Ga0501033_0000216 Ga0501033_0000216_10899_12326 462
161 3300049571 Ga0501034_0000476 Ga0501034_0000476_55198_56625 462
162 3300049572 Ga0501036_0002914 Ga0501036_0002914_1343_2770 462
163 3300049573 Ga0501037_0000021 Ga0501037_0000021_138949_140376 462
164 3300049574 Ga0501038_0000032 Ga0501038_0000032_120670_122097 462
165 3300049575 Ga0501039_0000025 Ga0501039_0000025_134939_136366 462
166 3300049579 Ga0501043_0000453 Ga0501043_0000453_12671_14098 462
167 3300049581 Ga0501047_0256871 Ga0501047_0256871_135_1562 462
168 3300049822 Ga0501035_0000085 Ga0501035_0000085_100981_102408 462
169 3300049823 Ga0501044_0008329 Ga0501044_0008329_4712_6139 462
170 3300053153 Ga0500616_0092771 Ga0500616_0092771_80_1471 462
171 3300005544 Ga0070686_100001465 Ga0070686_1000014656 463
172 3300021388 Ga0213875_10000229 Ga0213875_1000022940 463
173 3300037853 Ga0436364_0530420 Ga0436364_0530420_80836_82233 463
174 3300049515 Ga0501292_000008 Ga0501292_000008_43554_44948 463
175 3300049690 Ga0501261_000030 Ga0501261_000030_6937_8331 463
176 3300049775 Ga0501279_000002 Ga0501279_000002_115486_116880 463
177 3300001976 JGI24752J21851_1001781 JGI24752J21851_10017812 464
178 3300005289 Ga0065704_10086160 Ga0065704_100861603 464
179 3300005331 Ga0070670_100000051 Ga0070670_10000005131 464
180 3300005367 Ga0070667_100000222 Ga0070667_10000022239 464
181 3300005617 Ga0068859_100260665 Ga0068859_1002606652 464
182 3300005618 Ga0068864_100000004 Ga0068864_10000000452 464
183 3300005841 Ga0068863_100000002 Ga0068863_10000000252 464
184 3300005844 Ga0068862_100000002 Ga0068862_100000002449 464
185 3300006931 Ga0097620_100260659 Ga0097620_1002606592 464
186 3300009011 Ga0105251_10001952 Ga0105251_1000195210 464
187 3300009101 Ga0105247_10021994 Ga0105247_100219943 464
188 3300009177 Ga0105248_10000010 Ga0105248_10000010295 464
189 3300009553 Ga0105249_10000041 Ga0105249_1000004122 464
190 3300025735 Ga0207713_1004097 Ga0207713_10040975 464
191 3300025925 Ga0207650_10000199 Ga0207650_1000019915 464
192 3300025941 Ga0207711_10000035 Ga0207711_10000035133 464
193 3300025961 Ga0207712_10000580 Ga0207712_1000058011 464
194 3300025986 Ga0207658_10000479 Ga0207658_1000047931 464
195 3300026067 Ga0207678_10144103 Ga0207678_101441032 464
196 3300026088 Ga0207641_10000002 Ga0207641_10000002533 464
197 3300026095 Ga0207676_10000005 Ga0207676_10000005274 464
198 3300028380 Ga0268265_10000003 Ga0268265_10000003456 464
199 3300048904 Ga0496101_0014378 Ga0496101_0014378_1730_3130 464
200 3300048921 Ga0496118_0000801 Ga0496118_0000801_46213_47613 464
201 3300049664 Ga0501224_001350 Ga0501224_001350_835_2238 464
202 3300001976 JGI24752J21851_1001238 JGI24752J21851_10012385 465
203 3300005366 Ga0070659_100230003 Ga0070659_1002300031 465
204 3300009101 Ga0105247_10005955 Ga0105247_100059554 465
205 3300009177 Ga0105248_10064706 Ga0105248_100647063 465
206 3300009177 Ga0105248_10075137 Ga0105248_100751373 465
207 3300009545 Ga0105237_10291123 Ga0105237_102911232 465
208 3300009553 Ga0105249_10000103 Ga0105249_10000103122 465
209 3300025900 Ga0207710_10012783 Ga0207710_100127833 465
210 3300025961 Ga0207712_10000069 Ga0207712_10000069124 465
211 3300025972 Ga0207668_10002756 Ga0207668_100027562 465
212 3300026041 Ga0207639_10097916 Ga0207639_100979162 465
213 3300031456 Ga0307513_10036387 Ga0307513_100363871 465
214 3300031901 Ga0307406_10002286 Ga0307406_100022866 465
215 3300031911 Ga0307412_10005602 Ga0307412_100056028 465
216 3300046460 Ga0495638_0047241 Ga0495638_0047241_559_1965 465
217 3300047472 Ga0495686_0004143 Ga0495686_0004143_4004_5413 465
218 3300048920 Ga0496117_0037057 Ga0496117_0037057_769_2175 465
219 3300048921 Ga0496118_0001927 Ga0496118_0001927_6549_7955 465
220 3300048922 Ga0496119_0054174 Ga0496119_0054174_763_2172 465
221 3300048927 Ga0496124_0058874 Ga0496124_0058874_1294_2700 465
222 3300049513 Ga0501290_000239 Ga0501290_000239_4343_5749 465
223 3300049513 Ga0501290_001850 Ga0501290_001850_1003_2403 465
224 3300049517 Ga0501294_000117 Ga0501294_000117_5913_7319 465
225 3300049570 Ga0501033_0021762 Ga0501033_0021762_2498_3907 465
226 3300049663 Ga0501223_004275 Ga0501223_004275_1359_2765 465
227 3300049686 Ga0501257_000046 Ga0501257_000046_27842_29242 465
228 3300049705 Ga0501225_0002873 Ga0501225_0002873_3431_4837 465
229 3300049776 Ga0501280_000010 Ga0501280_000010_6083_7489 465
230 3300049776 Ga0501280_002446 Ga0501280_002446_1645_3045 465
231 3300049777 Ga0501281_00100 Ga0501281_00100_3892_5298 465
232 3300053116 Ga0500592_000118 Ga0500592_000118_11844_13265 465
233 3300053158 Ga0500627_0000799 Ga0500627_0000799_1780_3201 465

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02696

SelO

Protein adenylyltransferase SelO

30

406

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6iny-assembly1.cif.gz_A crystal structure of an uncharacterized protein 0.8575 6 458
6lna-assembly2.cif.gz_B ydiu complex with ampnpp and mn2+ 0.8501 11 458
6lna-assembly1.cif.gz_A ydiu complex with ampnpp and mn2+ 0.8386 6 458
6k20-assembly1.cif.gz_A structure of apo ydiu 0.8345 6 458
6iny-assembly1.cif.gz_A crystal structure of an uncharacterized protein 0.8329 6 458
ID Description Score Start End Superfamily
af_Q9ZU68_21_206_1.10.510.10 Mainly Alpha;Orthogonal Bundle;Transferase(Phosphotransferase); domain 1;Transferase(Phosphotransferase) domain 1 0.5399 226 325 1.10.510.10
af_P24348_966_1165_1.10.510.10 Mainly Alpha;Orthogonal Bundle;Transferase(Phosphotransferase); domain 1;Transferase(Phosphotransferase) domain 1 0.5242 204 329 1.10.510.10
af_Q2FW70_430_654_1.10.510.40 Mainly Alpha;Orthogonal Bundle;Transferase(Phosphotransferase); domain 1; 0.5238 202 345 1.10.510.40
af_Q22243_347_556_1.10.510.10 Mainly Alpha;Orthogonal Bundle;Transferase(Phosphotransferase); domain 1;Transferase(Phosphotransferase) domain 1 0.5027 204 332 1.10.510.10
af_Q4DBG1_23_194_1.10.510.10 Mainly Alpha;Orthogonal Bundle;Transferase(Phosphotransferase); domain 1;Transferase(Phosphotransferase) domain 1 0.4824 96 268 1.10.510.10
ID Description Score Start End GO Terms
AF-A0A318AXP8-F1-model_v4 deleted 0.9854 36 461
AF-A0A4Q3J2P6-F1-model_v4 YdiU family protein 0.9811 11 305 GO:0005524
GO:0046872
GO:0070733
AF-A0A318AXP8-F1-model_v4 deleted 0.9807 36 461
AF-A0A520H996-F1-model_v4 Selenoprotein O 0.9803 109 461 GO:0005524
GO:0046872
GO:0070733
AF-A0A258B9Z2-F1-model_v4 Selenoprotein O 0.977 8 164 GO:0005524
GO:0046872
GO:0070733

Feature Viewer

pLDDT pTM Quality
90.81 0.92 High
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Predicted Structure (AlphaFold2)

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