F345158

General Info

Members Datasets Scaffolds Average Seq Length
232 164 462 185

Family's Representative Sequence

Representative Sequence 3300026118|Ga0207675_100208840|Ga0207675_1002088403
Length 207
Sequence MKRPDKNTRVGAIVGLVAIGMFGLAYASVPLYAMFCSATGFAGTTKRAEGAEAPGAVVGKIVSVRFDANTVPQLPWRFSPEKSTERVAVGAREMAFFTARNLSDRPVTGRATFNVTPEQAGQYFTKIQCFCFAEQLLEPGQSVEMPVSFFIDPQIVSDRDGRSISLIVLSYTFYPVENKAGLAGRTGDGAGGGPVRGTPAAIRGTAG

Samples

Sample ID Description Type Environment
1 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
8 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
9 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
84 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
85 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
89 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
92 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
93 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
94 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
95 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
96 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
99 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
100 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
101 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
102 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
103 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
104 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
105 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
106 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
107 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
108 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
109 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
113 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
114 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
115 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
116 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
117 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
118 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
119 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
120 3300049516 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_B_5_drought Metagenome Rhizosphere
121 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
122 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
123 3300049524 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H21_B_7_control Metagenome Rhizosphere
124 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
128 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
129 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
130 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
131 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
132 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
133 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
134 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
135 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
136 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
137 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
138 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
139 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
140 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
141 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
142 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
143 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
144 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
145 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
146 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
149 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
150 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
151 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
152 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
153 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
154 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
155 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
156 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
157 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
158 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
159 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
160 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
162 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
163 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
164 2643221605 Sphingomonas sp. Root710 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.71
Metatranscriptomes 0.86
Isolates 0.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.64
Nodule 0
Rhizoplane 1.29
Rhizosphere 80.6
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207675_100208840 3300026118 Bacteria 1877
2 SwRhRL3b_contig_4278080 2162886006 Bacteria 1078
3 JGI24740J21852_10054538 3300001979 Bacteria 1128
4 JGI24739J22299_10003031 3300001989 Bacteria 6424
5 JGI24739J22299_10066373 3300001989 Bacteria 1130
6 JGI24737J22298_10007379 3300001990 Bacteria 3714
7 JGI24735J21928_10096960 3300002067 Bacteria 846
8 JGI24738J21930_10018592 3300002075 Bacteria 1452
9 JGI24751J29686_10000022 3300002459 Bacteria 104477
10 Ga0055530_10001062 3300003791 Bacteria 21723
11 Ga0055531_10000562 3300003794 Bacteria 32627
12 Ga0065704_10115965 3300005289 Bacteria 1862
13 Ga0065707_10082356 3300005295 Bacteria 16287
14 Ga0065707_10095794 3300005295 Bacteria 3337
15 Ga0070670_100000006 3300005331 Bacteria 319420
16 Ga0070670_100034263 3300005331 Bacteria 4370
17 Ga0070666_10291087 3300005335 Bacteria 1162
18 Ga0070668_100000856 3300005347 Bacteria 21130
19 Ga0070668_100135091 3300005347 Bacteria 1983
20 Ga0070668_100228299 3300005347 Bacteria 1538
21 Ga0070669_100000036 3300005353 Bacteria 137564
22 Ga0070669_100481298 3300005353 Bacteria 1027
23 Ga0070671_100004093 3300005355 Bacteria 11514
24 Ga0070667_100000298 3300005367 Bacteria 55786
25 Ga0070667_100266484 3300005367 Bacteria 1535
26 Ga0070663_100551271 3300005455 Bacteria 964
27 Ga0070678_100373188 3300005456 Bacteria 1232
28 Ga0070662_100484886 3300005457 Bacteria 1030
29 Ga0068853_100004572 3300005539 Bacteria 10730
30 Ga0068853_100390275 3300005539 Bacteria 1301
31 Ga0070686_100000730 3300005544 Bacteria 19129
32 Ga0070665_100000109 3300005548 Bacteria 155026
33 Ga0070665_100187373 3300005548 Bacteria 2070
34 Ga0068855_100263588 3300005563 Bacteria 1919
35 Ga0068855_100305990 3300005563 Bacteria 1759
36 Ga0068857_100221848 3300005577 Bacteria 1727
37 Ga0068857_100233553 3300005577 Bacteria 1682
38 Ga0068852_100353355 3300005616 Bacteria 1436
39 Ga0068852_100373741 3300005616 Bacteria 1397
40 Ga0068859_100001795 3300005617 Bacteria 21856
41 Ga0068859_100049703 3300005617 Bacteria 4212
42 Ga0068859_100186716 3300005617 Bacteria 2157
43 Ga0068864_100000014 3300005618 Bacteria 308927
44 Ga0068861_100001588 3300005719 Bacteria 14465
45 Ga0068863_100000578 3300005841 Bacteria 37349
46 Ga0068863_100006823 3300005841 Bacteria 11198
47 Ga0068863_100008863 3300005841 Bacteria 9823
48 Ga0068860_100000412 3300005843 Bacteria 55786
49 Ga0068862_100000007 3300005844 Bacteria 313933
50 Ga0068862_100059494 3300005844 Bacteria 3281
51 Ga0081455_10000220 3300005937 Bacteria 73579
52 Ga0075366_10034344 3300006195 Bacteria 2986
53 Ga0075370_10161890 3300006353 Bacteria 1313
54 Ga0075430_100578935 3300006846 Bacteria 926
55 Ga0075430_100974043 3300006846 Bacteria 699
56 Ga0075434_100092245 3300006871 Bacteria 3031
57 Ga0097620_100001795 3300006931 Bacteria 21856
58 Ga0097620_100049703 3300006931 Bacteria 4212
59 Ga0097620_100186709 3300006931 Bacteria 2157
60 Ga0105241_10318836 3300009174 Bacteria 1340
61 Ga0105248_10000113 3300009177 Bacteria 91128
62 Ga0105248_10071758 3300009177 Bacteria 3891
63 Ga0105237_10337877 3300009545 Bacteria 1510
64 Ga0105238_10053466 3300009551 Bacteria 4058
65 Ga0105249_10056737 3300009553 Bacteria 3586
66 Ga0105249_10087077 3300009553 Bacteria 2914
67 Ga0105249_10365918 3300009553 Bacteria 1464
68 Ga0157326_1000001 3300012513 Bacteria 19397
69 Ga0163163_10123628 3300014325 Bacteria 2623
70 Ga0157380_10000042 3300014326 Bacteria 75921
71 Ga0157380_10003277 3300014326 Bacteria 11095
72 Ga0157380_11032647 3300014326 Bacteria 857
73 Ga0213876_10012204 3300021384 Bacteria 4575
74 Ga0209050_1000131 3300025298 Bacteria 186028
75 Ga0209257_1000028 3300025304 Bacteria 699493
76 Ga0207680_10052723 3300025903 Bacteria 2439
77 Ga0207680_10054510 3300025903 Bacteria 2406
78 Ga0207654_10212757 3300025911 Bacteria 1278
79 Ga0207649_10307159 3300025920 Bacteria 1161
80 Ga0207681_10000001 3300025923 Bacteria 1105841
81 Ga0207694_10103887 3300025924 Bacteria 2254
82 Ga0207694_10209699 3300025924 Bacteria 1587
83 Ga0207650_10000023 3300025925 Bacteria 308148
84 Ga0207650_10013218 3300025925 Bacteria 5711
85 Ga0207644_10000045 3300025931 Bacteria 105495
86 Ga0207706_10084596 3300025933 Bacteria 2789
87 Ga0207670_10350166 3300025936 Bacteria 1169
88 Ga0207711_10001614 3300025941 Bacteria 20805
89 Ga0207711_10025140 3300025941 Bacteria 4997
90 Ga0207679_10339140 3300025945 Bacteria 1307
91 Ga0207667_10627084 3300025949 Bacteria 1082
92 Ga0207667_10676913 3300025949 Bacteria 1035
93 Ga0207712_10063086 3300025961 Bacteria 2636
94 Ga0207712_10215292 3300025961 Bacteria 1532
95 Ga0207668_10000909 3300025972 Bacteria 17829
96 Ga0207668_10006879 3300025972 Bacteria 6749
97 Ga0207668_10162123 3300025972 Bacteria 1743
98 Ga0207640_10251288 3300025981 Bacteria 1372
99 Ga0207658_10000254 3300025986 Bacteria 55800
100 Ga0207658_10051357 3300025986 Bacteria 3038
101 Ga0207639_10033573 3300026041 Bacteria 3786
102 Ga0207678_10816973 3300026067 Bacteria 823
103 Ga0207641_10013065 3300026088 Bacteria 6809
104 Ga0207641_10072012 3300026088 Bacteria 2975
105 Ga0207641_10085907 3300026088 Bacteria 2742
106 Ga0207676_10000017 3300026095 Bacteria 308709
107 Ga0207674_10084858 3300026116 Bacteria 3164
108 Ga0207674_10114998 3300026116 Bacteria 2662
109 Ga0207675_100000280 3300026118 Bacteria 48895
110 Ga0207698_10157159 3300026142 Bacteria 1983
111 Ga0207698_11246286 3300026142 Bacteria 758
112 Ga0268266_10000061 3300028379 Bacteria 255207
113 Ga0268265_10000002 3300028380 Bacteria 1035381
114 Ga0268265_10040106 3300028380 Bacteria 3456
115 Ga0268264_10000083 3300028381 Bacteria 245366
116 Ga0268264_10078649 3300028381 Bacteria 2812
117 Ga0307408_100064362 3300031548 Bacteria 2685
118 Ga0307408_100182273 3300031548 Bacteria 1685
119 Ga0307408_100723247 3300031548 Bacteria 897
120 Ga0307405_11353441 3300031731 Bacteria 621
121 Ga0307413_10231521 3300031824 Bacteria 1357
122 Ga0307413_10615316 3300031824 Bacteria 891
123 Ga0307406_10024311 3300031901 Bacteria 3617
124 Ga0307406_10216923 3300031901 Bacteria 1419
125 Ga0307406_10639601 3300031901 Bacteria 882
126 Ga0307412_10023871 3300031911 Bacteria 3769
127 Ga0307412_10037364 3300031911 Bacteria 3120
128 Ga0307412_10139913 3300031911 Bacteria 1771
129 Ga0307409_100128198 3300031995 Bacteria 2163
130 Ga0307409_100256918 3300031995 Bacteria 1601
131 Ga0307416_100013072 3300032002 Bacteria 5628
132 Ga0307416_100086043 3300032002 Bacteria 2678
133 Ga0307416_100363881 3300032002 Bacteria 1470
134 Ga0307414_10640279 3300032004 Bacteria 957
135 Ga0307411_10544278 3300032005 Bacteria 989
136 Ga0307411_10705993 3300032005 Bacteria 879
137 Ga0307510_10121378 3300033180 Bacteria 2316
138 Ga0395900_0359651 3300037418 Bacteria 1427
139 Ga0395905_0535545 3300037471 Bacteria 1072
140 Ga0237819_00241 3300038705 Bacteria 19890
141 Ga0237816_00825 3300039145 Bacteria 2557
142 Ga0436365_0096417 3300039437 Bacteria 16374
143 Ga0436362_0286901 3300039453 Bacteria 865
144 Ga0451802_2153515 3300041460 Bacteria 743
145 Ga0451837_0877960 3300041494 Bacteria 637
146 Ga0451841_0472409 3300041498 Bacteria 1771
147 Ga0439445_0059088 3300042004 Bacteria 1046
148 Ga0439432_046645 3300042006 Bacteria 1361
149 Ga0495638_0025769 3300046460 Bacteria 3818
150 Ga0495650_0029076 3300046471 Bacteria 2525
151 Ga0495583_0000175 3300046506 Bacteria 108912
152 Ga0495606_0010142 3300046507 Bacteria 7862
153 Ga0495606_0095277 3300046507 Bacteria 1823
154 Ga0495642_0157812 3300046528 Bacteria 983
155 Ga0495654_0016645 3300046530 Bacteria 3879
156 Ga0495668_0010174 3300046616 Bacteria 5717
157 Ga0495668_0067557 3300046616 Bacteria 1967
158 Ga0495668_0192678 3300046616 Bacteria 1116
159 Ga0495611_0024486 3300046648 Bacteria 2626
160 Ga0495661_0035130 3300046665 Bacteria 3149
161 Ga0495670_0037680 3300046691 Bacteria 2410
162 Ga0495673_0022959 3300047469 Bacteria 3046
163 Ga0495681_0157581 3300047470 Bacteria 947
164 Ga0495686_0001271 3300047472 Bacteria 28583
165 Ga0495686_0151126 3300047472 Bacteria 1363
166 Ga0495686_0159086 3300047472 Bacteria 1321
167 Ga0496101_0459568 3300048904 Bacteria 1005
168 Ga0496111_0202814 3300048914 Bacteria 1474
169 Ga0496122_0001355 3300048925 Bacteria 39961
170 Ga0496123_0003882 3300048926 Bacteria 16264
171 Ga0496123_0064222 3300048926 Bacteria 2341
172 Ga0496124_0096629 3300048927 Bacteria 2399
173 Ga0496124_0281824 3300048927 Bacteria 1211
174 Ga0496125_0014472 3300048928 Bacteria 7681
175 Ga0496125_0152040 3300048928 Bacteria 1588
176 Ga0501306_005500 3300049127 Bacteria 1455
177 Ga0495682_0144497 3300049460 Bacteria 849
178 Ga0501290_001602 3300049513 Bacteria 3049
179 Ga0501292_000311 3300049515 Bacteria 6731
180 Ga0501293_001528 3300049516 Bacteria 1739
181 Ga0501294_001207 3300049517 Bacteria 2671
182 Ga0501300_000985 3300049523 Bacteria 4345
183 Ga0501300_002674 3300049523 Bacteria 2671
184 Ga0501301_000349 3300049524 Bacteria 2719
185 Ga0501317_004018 3300049533 Bacteria 1506
186 Ga0501034_0060919 3300049571 Bacteria 3791
187 Ga0501046_0265903 3300049580 Bacteria 1259
188 Ga0501222_000962 3300049662 Bacteria 4129
189 Ga0501223_005727 3300049663 Bacteria 2597
190 Ga0501223_006808 3300049663 Bacteria 2349
191 Ga0501224_005266 3300049664 Bacteria 1848
192 Ga0501227_008054 3300049665 Bacteria 2262
193 Ga0501233_002894 3300049668 Bacteria 3060
194 Ga0501235_010757 3300049669 Bacteria 2001
195 Ga0501249_002600 3300049679 Bacteria 3639
196 Ga0501257_002237 3300049686 Bacteria 4053
197 Ga0501257_012589 3300049686 Bacteria 1936
198 Ga0501259_002258 3300049688 Bacteria 3159
199 Ga0501261_000111 3300049690 Bacteria 12333
200 Ga0501225_0007429 3300049705 Bacteria 3173
201 Ga0501245_001597 3300049708 Bacteria 2949
202 Ga0501279_000095 3300049775 Bacteria 14125
203 Ga0501280_000141 3300049776 Bacteria 18711
204 Ga0501281_00092 3300049777 Bacteria 10626
205 Ga0501282_000655 3300049778 Bacteria 3982
206 Ga0501283_000632 3300049779 Bacteria 4651
207 Ga0501204_000632 3300049850 Bacteria 3142
208 nmdc:mga0k408_121812_c1 3300050493 Bacteria 1545
209 nmdc:mga07m45_155588_c1 3300050496 Bacteria 1326
210 nmdc:mga0qj67_80547_c1 3300050509 Bacteria 2609
211 nmdc:mga0n895_637943_c1 3300050512 Bacteria 1065
212 Ga0500643_000419 3300053087 Bacteria 32299
213 Ga0500643_002924 3300053087 Bacteria 8479
214 Ga0500643_011686 3300053087 Bacteria 3187
215 Ga0500647_0086017 3300053091 Bacteria 1507
216 Ga0500566_0091420 3300053094 Bacteria 1682
217 Ga0500555_001348 3300053103 Bacteria 7686
218 Ga0500592_000102 3300053116 Bacteria 18383
219 Ga0500592_012126 3300053116 Bacteria 1377
220 Ga0500594_0004703 3300053118 Bacteria 3014
221 Ga0500608_054715 3300053122 Bacteria 1914
222 Ga0500658_0088719 3300053134 Bacteria 1334
223 Ga0500568_0081873 3300053139 Bacteria 1225
224 Ga0500573_0074953 3300053140 Bacteria 1927
225 Ga0500577_0047895 3300053142 Bacteria 1591
226 Ga0500604_0016181 3300053151 Bacteria 2052
227 Ga0500616_0005243 3300053153 Bacteria 8864
228 Ga0500616_0150209 3300053153 Bacteria 1079
229 Ga0500627_0002238 3300053158 Bacteria 5670
230 Ga0500611_000791 3300053727 Bacteria 3273
231 2644038919 2643221605 Bacteria 4772303
232 Ga0207675_100208840
233 SwRhRL3b_contig_4278080
234 JGI24740J21852_10054538
235 JGI24739J22299_10003031
236 JGI24739J22299_10066373
237 JGI24737J22298_10007379
238 JGI24735J21928_10096960
239 JGI24738J21930_10018592
240 JGI24751J29686_10000022
241 Ga0055530_10001062
242 Ga0055531_10000562
243 Ga0065704_10115965
244 Ga0065707_10082356
245 Ga0065707_10095794
246 Ga0070670_100000006
247 Ga0070670_100034263
248 Ga0070666_10291087
249 Ga0070668_100000856
250 Ga0070668_100135091
251 Ga0070668_100228299
252 Ga0070669_100000036
253 Ga0070669_100481298
254 Ga0070671_100004093
255 Ga0070667_100000298
256 Ga0070667_100266484
257 Ga0070663_100551271
258 Ga0070678_100373188
259 Ga0070662_100484886
260 Ga0068853_100004572
261 Ga0068853_100390275
262 Ga0070686_100000730
263 Ga0070665_100000109
264 Ga0070665_100187373
265 Ga0068855_100263588
266 Ga0068855_100305990
267 Ga0068857_100221848
268 Ga0068857_100233553
269 Ga0068852_100353355
270 Ga0068852_100373741
271 Ga0068859_100001795
272 Ga0068859_100049703
273 Ga0068859_100186716
274 Ga0068864_100000014
275 Ga0068861_100001588
276 Ga0068863_100000578
277 Ga0068863_100006823
278 Ga0068863_100008863
279 Ga0068860_100000412
280 Ga0068862_100000007
281 Ga0068862_100059494
282 Ga0081455_10000220
283 Ga0075366_10034344
284 Ga0075370_10161890
285 Ga0075430_100578935
286 Ga0075430_100974043
287 Ga0075434_100092245
288 Ga0097620_100001795
289 Ga0097620_100049703
290 Ga0097620_100186709
291 Ga0105241_10318836
292 Ga0105248_10000113
293 Ga0105248_10071758
294 Ga0105237_10337877
295 Ga0105238_10053466
296 Ga0105249_10056737
297 Ga0105249_10087077
298 Ga0105249_10365918
299 Ga0157326_1000001
300 Ga0163163_10123628
301 Ga0157380_10000042
302 Ga0157380_10003277
303 Ga0157380_11032647
304 Ga0213876_10012204
305 Ga0209050_1000131
306 Ga0209257_1000028
307 Ga0207680_10052723
308 Ga0207680_10054510
309 Ga0207654_10212757
310 Ga0207649_10307159
311 Ga0207681_10000001
312 Ga0207694_10103887
313 Ga0207694_10209699
314 Ga0207650_10000023
315 Ga0207650_10013218
316 Ga0207644_10000045
317 Ga0207706_10084596
318 Ga0207670_10350166
319 Ga0207711_10001614
320 Ga0207711_10025140
321 Ga0207679_10339140
322 Ga0207667_10627084
323 Ga0207667_10676913
324 Ga0207712_10063086
325 Ga0207712_10215292
326 Ga0207668_10000909
327 Ga0207668_10006879
328 Ga0207668_10162123
329 Ga0207640_10251288
330 Ga0207658_10000254
331 Ga0207658_10051357
332 Ga0207639_10033573
333 Ga0207678_10816973
334 Ga0207641_10013065
335 Ga0207641_10072012
336 Ga0207641_10085907
337 Ga0207676_10000017
338 Ga0207674_10084858
339 Ga0207674_10114998
340 Ga0207675_100000280
341 Ga0207698_10157159
342 Ga0207698_11246286
343 Ga0268266_10000061
344 Ga0268265_10000002
345 Ga0268265_10040106
346 Ga0268264_10000083
347 Ga0268264_10078649
348 Ga0307408_100064362
349 Ga0307408_100182273
350 Ga0307408_100723247
351 Ga0307405_11353441
352 Ga0307413_10231521
353 Ga0307413_10615316
354 Ga0307406_10024311
355 Ga0307406_10216923
356 Ga0307406_10639601
357 Ga0307412_10023871
358 Ga0307412_10037364
359 Ga0307412_10139913
360 Ga0307409_100128198
361 Ga0307409_100256918
362 Ga0307416_100013072
363 Ga0307416_100086043
364 Ga0307416_100363881
365 Ga0307414_10640279
366 Ga0307411_10544278
367 Ga0307411_10705993
368 Ga0307510_10121378
369 Ga0395900_0359651
370 Ga0395905_0535545
371 Ga0237819_00241
372 Ga0237816_00825
373 Ga0436365_0096417
374 Ga0436362_0286901
375 Ga0451802_2153515
376 Ga0451837_0877960
377 Ga0451841_0472409
378 Ga0439445_0059088
379 Ga0439432_046645
380 Ga0495638_0025769
381 Ga0495650_0029076
382 Ga0495583_0000175
383 Ga0495606_0010142
384 Ga0495606_0095277
385 Ga0495642_0157812
386 Ga0495654_0016645
387 Ga0495668_0010174
388 Ga0495668_0067557
389 Ga0495668_0192678
390 Ga0495611_0024486
391 Ga0495661_0035130
392 Ga0495670_0037680
393 Ga0495673_0022959
394 Ga0495681_0157581
395 Ga0495686_0001271
396 Ga0495686_0151126
397 Ga0495686_0159086
398 Ga0496101_0459568
399 Ga0496111_0202814
400 Ga0496122_0001355
401 Ga0496123_0003882
402 Ga0496123_0064222
403 Ga0496124_0096629
404 Ga0496124_0281824
405 Ga0496125_0014472
406 Ga0496125_0152040
407 Ga0501306_005500
408 Ga0495682_0144497
409 Ga0501290_001602
410 Ga0501292_000311
411 Ga0501293_001528
412 Ga0501294_001207
413 Ga0501300_000985
414 Ga0501300_002674
415 Ga0501301_000349
416 Ga0501317_004018
417 Ga0501034_0060919
418 Ga0501046_0265903
419 Ga0501222_000962
420 Ga0501223_005727
421 Ga0501223_006808
422 Ga0501224_005266
423 Ga0501227_008054
424 Ga0501233_002894
425 Ga0501235_010757
426 Ga0501249_002600
427 Ga0501257_002237
428 Ga0501257_012589
429 Ga0501259_002258
430 Ga0501261_000111
431 Ga0501225_0007429
432 Ga0501245_001597
433 Ga0501279_000095
434 Ga0501280_000141
435 Ga0501281_00092
436 Ga0501282_000655
437 Ga0501283_000632
438 Ga0501204_000632
439 nmdc:mga0k408_121812_c1
440 nmdc:mga07m45_155588_c1
441 nmdc:mga0qj67_80547_c1
442 nmdc:mga0n895_637943_c1
443 Ga0500643_000419
444 Ga0500643_002924
445 Ga0500643_011686
446 Ga0500647_0086017
447 Ga0500566_0091420
448 Ga0500555_001348
449 Ga0500592_000102
450 Ga0500592_012126
451 Ga0500594_0004703
452 Ga0500608_054715
453 Ga0500658_0088719
454 Ga0500568_0081873
455 Ga0500573_0074953
456 Ga0500577_0047895
457 Ga0500604_0016181
458 Ga0500616_0005243
459 Ga0500616_0150209
460 Ga0500627_0002238
461 Ga0500611_000791
462 2644038919

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04442

CtaG_Cox11

Cytochrome c oxidase assembly protein CtaG/Cox11

28

175

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1sp0-assembly1.cif.gz_A solution structure of apocox11 0.8597 60 178
1sp0-assembly1.cif.gz_A solution structure of apocox11 0.7835 60 178
7q5z-assembly1.cif.gz_A cryo-em structure of native human a2ml1 0.754 74 151
7q1y-assembly2.cif.gz_B x-ray structure of human a2ml1 0.751 74 152
8b0h-assembly1.cif.gz_A 2c9, c5b9-cd59 cryoem structure 0.7319 75 152
ID Description Score Start End Superfamily
af_Q8GWR0_141_281_2.60.370.10 Mainly Beta;Sandwich;Ctag/Cox11 (Pfam 04442);Ctag/Cox11 0.9553 58 182 2.60.370.10
af_A3KNN8_122_254_2.60.370.10 Mainly Beta;Sandwich;Ctag/Cox11 (Pfam 04442);Ctag/Cox11 0.9532 56 180 2.60.370.10
af_Q4DEH9_91_226_2.60.370.10 Mainly Beta;Sandwich;Ctag/Cox11 (Pfam 04442);Ctag/Cox11 0.915 50 177 2.60.370.10
af_A3KNN8_122_254_2.60.370.10 Mainly Beta;Sandwich;Ctag/Cox11 (Pfam 04442);Ctag/Cox11 0.8908 56 180 2.60.370.10
af_A0A1D6L299_106_203_2.60.370.10 Mainly Beta;Sandwich;Ctag/Cox11 (Pfam 04442);Ctag/Cox11 0.8887 49 149 2.60.370.10
ID Description Score Start End GO Terms
AF-A0A259H7N0-F1-model_v4 Cytochrome c oxidase assembly protein CtaG 0.9743 58 177 GO:0005507
GO:0005886
AF-B8CB33-F1-model_v4 Uncharacterized protein 0.9725 62 173 GO:0005507
GO:0005743
AF-A0A0G4NJC3-F1-model_v4 Cytochrome c oxidase assembly protein CtaG/Cox11 0.9723 56 173 GO:0005507
GO:0005743
AF-A0A4Q6FW57-F1-model_v4 deleted 0.9703 58 179
AF-A0A7V8D9I6-F1-model_v4 Cytochrome c oxidase assembly protein CtaG 0.9694 58 182 GO:0005507
GO:0005886

Map