F344818

General Info

Members Datasets Scaffolds Average Seq Length
232 154 231 765

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100028652|Ga0070706_1000286524
Length 788
Sequence MKPVSEEQSVPEQPPPWTGPAATSERAVPLDLPGFLTREHHRIHLVGVAGSGMSGIAALLIELGHAVSGSDKVSTMETDRLQRLGLRFREQHRPEEAGTADLIVFSSAIKNDNPILVSARNYGKPIVRRAEALAAIMRSRRGIVIAGMHGKTTTSAMTAHVLREGGLHPCHYVGAEIPILGTNAHWDSRAEYFVAEGDESDGTIALFQPEHTLILNIEEEHLDFYADLDAIEKVFAQLITQTTGTVFYNLDDKNAARVCRSLARGISYGFADEADYRAVDIRLMGFASTFRVDHRGQDLGEAVLNVPGQHNVHNALGVIALASELGVAFEKIAKSLAKFEHARRRFEIKYDSPRFLLVDDYGHHPTEIRATLKAARSVGRKRVLTMFQPHRYSRTKALRKEFGRAFDDADRVVVTDVYGSSEAPIPGVTGQIVVDEIVGHGHRSVSYEPRLEWVHRVVGNILESGDLVLSLGAGNIHEQLSALAADLVIAEKLKEIVGEGGDVRLYEPLSKHTTLRVGGPAQFWVEPRTEEAFAGLIRFCRDEDLPLFVMGRGSNLLVRDGGVRGVVVHPCGGDFDKIEVNGDEITAGVGAKLKEVAYAGKAAGIGGMEWMEGIPGAVGGGLRMNAGAMGAQTFENVVRVRYLDANGEAHTKSRDELEVHYRDFSLLKKNFAVSAVFRGQPAPLEEIVRKLEASQDKRRASQPAAKSAGCIFKNPDSCPAGKLVDELGLKNAHVGKARVSEVHGNFIVNDGGATAAEMLELIEKIKATALAKRGIELETEVQIVGEPG

Samples

Sample ID Description Type Environment
1 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
4 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
25 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
29 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
30 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
31 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
34 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
35 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
38 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
51 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
52 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
101 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
102 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
103 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
106 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
107 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
108 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
111 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
112 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
113 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
114 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
115 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
116 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
120 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
121 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
122 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
123 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
124 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
125 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
126 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
127 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
128 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
153 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
154 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.57
Metatranscriptomes 0
Isolates 0.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.86
Nodule 0
Rhizoplane 7.76
Rhizosphere 87.07
Stem 0
Stem Tuber 0
Unclassified 4.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNXas_1000034 3300000545 Bacteria 28990
2 JGI24743J22301_10000044 3300001991 Bacteria 11132
3 JGI24033J26618_1000066 3300002155 Bacteria 15346
4 JGI25406J46586_10000002 3300003203 Bacteria 202415
5 rootH2_10011145 3300003320 Bacteria 22144
6 rootH1_10001752 3300003323 Bacteria 14969
7 Ga0065712_10008781 3300005290 Bacteria 4140
8 Ga0065715_10002858 3300005293 Bacteria 8746
9 Ga0065707_10003406 3300005295 Bacteria 11705
10 Ga0070676_10001419 3300005328 Bacteria 12100
11 Ga0070683_100013801 3300005329 Bacteria 7053
12 Ga0070670_100028061 3300005331 Bacteria 4843
13 Ga0070670_100061429 3300005331 Bacteria 3225
14 Ga0070666_10049824 3300005335 Bacteria 2816
15 Ga0068868_100019130 3300005338 Bacteria 5129
16 Ga0070660_100010659 3300005339 Bacteria 6502
17 Ga0070689_100009358 3300005340 Bacteria 6943
18 Ga0070687_100002579 3300005343 Bacteria 6833
19 Ga0070661_100000479 3300005344 Bacteria 30510
20 Ga0070661_100017032 3300005344 Bacteria 5149
21 Ga0070668_100002801 3300005347 Bacteria 12829
22 Ga0070669_100003642 3300005353 Bacteria 11111
23 Ga0070675_100002080 3300005354 Bacteria 14811
24 Ga0070675_100005525 3300005354 Bacteria 9676
25 Ga0070675_100013175 3300005354 Bacteria 6497
26 Ga0070671_100036377 3300005355 Bacteria 4083
27 Ga0070674_100003465 3300005356 Bacteria 8860
28 Ga0070688_100012161 3300005365 Bacteria 4813
29 Ga0070667_100011964 3300005367 Bacteria 7179
30 Ga0070667_100016903 3300005367 Bacteria 6037
31 Ga0070714_100020315 3300005435 Bacteria 5421
32 Ga0070713_100021743 3300005436 Bacteria 4942
33 Ga0070710_10007997 3300005437 Bacteria 5140
34 Ga0070711_100067475 3300005439 Bacteria 2510
35 Ga0070708_100002835 3300005445 Bacteria 13466
36 Ga0070708_100013589 3300005445 Bacteria 6673
37 Ga0070708_100038756 3300005445 Bacteria 4166
38 Ga0070662_100003227 3300005457 Bacteria 10137
39 Ga0070662_100055711 3300005457 Bacteria 2869
40 Ga0070706_100000072 3300005467 Bacteria 117347
41 Ga0070706_100006760 3300005467 Bacteria 10830
42 Ga0070706_100013428 3300005467 Bacteria 7572
43 Ga0070706_100028652 3300005467 Bacteria 5128
44 Ga0070706_100036970 3300005467 Bacteria 4510
45 Ga0070707_100008581 3300005468 Bacteria 9495
46 Ga0070707_100016930 3300005468 Bacteria 6848
47 Ga0070707_100021256 3300005468 Bacteria 6134
48 Ga0070707_100037631 3300005468 Bacteria 4618
49 Ga0070698_100002050 3300005471 Bacteria 22388
50 Ga0070698_100002781 3300005471 Bacteria 19252
51 Ga0070698_100009880 3300005471 Bacteria 10202
52 Ga0070699_100026278 3300005518 Bacteria 5021
53 Ga0070699_100032130 3300005518 Bacteria 4533
54 Ga0070684_100000339 3300005535 Bacteria 32322
55 Ga0070697_100000972 3300005536 Bacteria 21638
56 Ga0070697_100003517 3300005536 Bacteria 12036
57 Ga0070697_100003586 3300005536 Bacteria 11929
58 Ga0070697_100004257 3300005536 Bacteria 10971
59 Ga0070697_100010931 3300005536 Bacteria 7090
60 Ga0070697_100012199 3300005536 Bacteria 6730
61 Ga0070697_100014655 3300005536 Bacteria 6155
62 Ga0068853_100000007 3300005539 Bacteria 283307
63 Ga0070695_100017423 3300005545 Bacteria 4356
64 Ga0070665_100000005 3300005548 Bacteria 734905
65 Ga0070665_100013354 3300005548 Bacteria 8267
66 Ga0070704_100000846 3300005549 Bacteria 15252
67 Ga0068856_100000537 3300005614 Bacteria 41817
68 Ga0068859_100022585 3300005617 Bacteria 6309
69 Ga0068863_100003908 3300005841 Bacteria 14717
70 Ga0068863_100014311 3300005841 Bacteria 7642
71 Ga0068858_100009463 3300005842 Bacteria 9295
72 Ga0081455_10001013 3300005937 Bacteria 35565
73 Ga0081455_10001733 3300005937 Bacteria 26391
74 Ga0081455_10067801 3300005937 Bacteria 2972
75 Ga0081540_1000219 3300005983 Bacteria 60720
76 Ga0081539_10000061 3300005985 Bacteria 250890
77 Ga0081539_10002662 3300005985 Bacteria 24317
78 Ga0081539_10005093 3300005985 Bacteria 13767
79 Ga0070717_10003198 3300006028 Bacteria 11701
80 Ga0070717_10004539 3300006028 Bacteria 10039
81 Ga0070715_10017365 3300006163 Bacteria 2723
82 Ga0070712_100006123 3300006175 Bacteria 7444
83 Ga0070712_100037521 3300006175 Bacteria 3304
84 Ga0097621_100021086 3300006237 Bacteria 5032
85 Ga0068871_100011771 3300006358 Bacteria 6429
86 Ga0097620_100022585 3300006931 Bacteria 6309
87 Ga0105240_10079006 3300009093 Unclassified 4050
88 Ga0114129_10008097 3300009147 Bacteria 14978
89 Ga0105249_10007377 3300009553 Bacteria 9591
90 Ga0105239_10005383 3300010375 Bacteria 15034
91 Ga0157378_10000857 3300013297 Bacteria 28196
92 Ga0163162_10004036 3300013306 Bacteria 14087
93 Ga0163162_10005848 3300013306 Bacteria 11898
94 Ga0163162_10010219 3300013306 Bacteria 9118
95 Ga0163162_10061200 3300013306 Bacteria 3802
96 Ga0157372_10014289 3300013307 Bacteria 8489
97 Ga0157375_10001835 3300013308 Bacteria 18250
98 Ga0157375_10069070 3300013308 Bacteria 3538
99 Ga0157377_10016923 3300014745 Bacteria 3761
100 Ga0157379_10001744 3300014968 Bacteria 17985
101 Ga0163161_10002616 3300017792 Bacteria 12815
102 Ga0163161_10064683 3300017792 Bacteria 2668
103 Ga0213872_10000551 3300021361 Bacteria 29074
104 Ga0213872_10012166 3300021361 Bacteria 4057
105 Ga0213876_10021735 3300021384 Unclassified 3394
106 Ga0207697_10000151 3300025315 Bacteria 34208
107 Ga0207697_10000198 3300025315 Bacteria 32108
108 Ga0207697_10001147 3300025315 Bacteria 14579
109 Ga0207697_10006063 3300025315 Bacteria 5526
110 Ga0207697_10014861 3300025315 Bacteria 3224
111 Ga0207688_10002615 3300025901 Bacteria 9749
112 Ga0207680_10027449 3300025903 Bacteria 3170
113 Ga0207647_10002927 3300025904 Bacteria 12853
114 Ga0207645_10000634 3300025907 Bacteria 29170
115 Ga0207645_10004095 3300025907 Bacteria 10849
116 Ga0207645_10004666 3300025907 Bacteria 10094
117 Ga0207684_10000043 3300025910 Bacteria 259939
118 Ga0207684_10004711 3300025910 Bacteria 12793
119 Ga0207684_10015099 3300025910 Bacteria 6648
120 Ga0207684_10078547 3300025910 Bacteria 2807
121 Ga0207695_10007538 3300025913 Bacteria 13794
122 Ga0207693_10004670 3300025915 Bacteria 11541
123 Ga0207693_10008051 3300025915 Bacteria 8651
124 Ga0207663_10003000 3300025916 Bacteria 8173
125 Ga0207663_10017712 3300025916 Bacteria 3977
126 Ga0207662_10005639 3300025918 Bacteria 6694
127 Ga0207649_10000427 3300025920 Bacteria 30819
128 Ga0207646_10006659 3300025922 Bacteria 11907
129 Ga0207646_10012717 3300025922 Bacteria 8076
130 Ga0207681_10014018 3300025923 Bacteria 4969
131 Ga0207659_10004109 3300025926 Bacteria 8783
132 Ga0207659_10019633 3300025926 Bacteria 4452
133 Ga0207659_10039677 3300025926 Bacteria 3286
134 Ga0207700_10002264 3300025928 Bacteria 11048
135 Ga0207700_10016176 3300025928 Bacteria 4947
136 Ga0207700_10037761 3300025928 Bacteria 3501
137 Ga0207644_10006288 3300025931 Bacteria 7735
138 Ga0207644_10006455 3300025931 Bacteria 7643
139 Ga0207690_10007503 3300025932 Bacteria 6473
140 Ga0207690_10031516 3300025932 Bacteria 3393
141 Ga0207706_10000702 3300025933 Bacteria 35016
142 Ga0207706_10005196 3300025933 Bacteria 12147
143 Ga0207706_10008416 3300025933 Bacteria 9519
144 Ga0207670_10020724 3300025936 Bacteria 4044
145 Ga0207665_10015535 3300025939 Bacteria 4997
146 Ga0207665_10047121 3300025939 Bacteria 2889
147 Ga0207691_10002095 3300025940 Bacteria 19497
148 Ga0207691_10041100 3300025940 Bacteria 4271
149 Ga0207668_10006913 3300025972 Bacteria 6731
150 Ga0207658_10008718 3300025986 Bacteria 6889
151 Ga0207677_10009472 3300026023 Bacteria 5482
152 Ga0207639_10000001 3300026041 Bacteria 1431562
153 Ga0207702_10003806 3300026078 Bacteria 13620
154 Ga0207641_10001243 3300026088 Bacteria 25436
155 Ga0207683_10003358 3300026121 Bacteria 13946
156 Ga0209974_10013027 3300027876 Bacteria 2774
157 Ga0268266_10000012 3300028379 Bacteria 734912
158 Ga0268264_10064209 3300028381 Bacteria 3089
159 Ga0307511_10000129 3300030521 Bacteria 68792
160 Ga0265320_10011323 3300031240 Bacteria 5253
161 Ga0373951_0005766 3300035091 Bacteria 2864
162 Ga0373947_0018552 3300035725 Bacteria 4006
163 Ga0373937_0001540 3300036401 Bacteria 19390
164 Ga0395899_0000015 3300037312 Bacteria 470061
165 Ga0395900_0042222 3300037418 Bacteria 4698
166 Ga0395900_0047728 3300037418 Bacteria 4411
167 Ga0395898_0000051 3300037466 Bacteria 281872
168 Ga0436364_1380676 3300037853 Bacteria 4648
169 Ga0395901_0018296 3300038443 Bacteria 7153
170 Ga0436365_0539406 3300039437 Bacteria 56073
171 Ga0436365_0843245 3300039437 Bacteria 6554
172 Ga0436360_0602887 3300039438 Bacteria 3538
173 Ga0436360_0660138 3300039438 Bacteria 8615
174 Ga0436361_0118679 3300039447 Bacteria 26161
175 Ga0436361_0819850 3300039447 Bacteria 4680
176 Ga0436361_0890542 3300039447 Bacteria 2880
177 Ga0436361_0994023 3300039447 Bacteria 6975
178 Ga0436363_1312924 3300039450 Bacteria 7924
179 Ga0466965_0007338 3300044683 Bacteria 5056
180 Ga0466971_0000025 3300044719 Bacteria 62833
181 Ga0466957_0004581 3300044842 Bacteria 7723
182 Ga0451576_0019910 3300045051 Bacteria 7315
183 Ga0466967_0052694 3300045976 Bacteria 3573
184 Ga0495592_0027986 3300046454 Bacteria 4269
185 Ga0495651_0004539 3300046462 Bacteria 10616
186 Ga0495645_0010305 3300046543 Bacteria 6552
187 Ga0495623_0040071 3300046679 Bacteria 2992
188 Ga0495646_0003991 3300046680 Bacteria 9239
189 Ga0495604_0045847 3300047317 Bacteria 3410
190 Ga0495674_0074873 3300047319 Bacteria 2914
191 Ga0495674_0091093 3300047319 Bacteria 2605
192 Ga0495675_0004714 3300047444 Bacteria 8282
193 Ga0495675_0027915 3300047444 Bacteria 3597
194 Ga0495684_0028204 3300047471 Bacteria 4310
195 Ga0496101_0001708 3300048904 Bacteria 13133
196 Ga0496102_0062542 3300048905 Bacteria 3408
197 Ga0496104_0008942 3300048907 Bacteria 8902
198 Ga0496104_0088145 3300048907 Bacteria 2964
199 Ga0496105_0019035 3300048908 Bacteria 5533
200 Ga0496106_0003012 3300048909 Bacteria 12548
201 Ga0496106_0030455 3300048909 Bacteria 4024
202 Ga0496107_0001726 3300048910 Bacteria 13718
203 Ga0496108_0028411 3300048911 Bacteria 4627
204 Ga0496110_0014415 3300048913 Bacteria 6563
205 Ga0496110_0027035 3300048913 Bacteria 4916
206 Ga0496112_0005693 3300048915 Bacteria 10824
207 Ga0496112_0023801 3300048915 Bacteria 5858
208 Ga0496113_0005338 3300048916 Bacteria 8004
209 Ga0496114_0013171 3300048917 Bacteria 6629
210 Ga0496115_0000424 3300048918 Bacteria 34503
211 Ga0496115_0004076 3300048918 Bacteria 10555
212 Ga0496115_0018467 3300048918 Bacteria 5354
213 Ga0496125_0000029 3300048928 Bacteria 382675
214 Ga0501031_0000968 3300049568 Bacteria 17427
215 Ga0501032_0000504 3300049569 Bacteria 31645
216 Ga0501033_0000003 3300049570 Bacteria 586973
217 Ga0501033_0000083 3300049570 Bacteria 89452
218 Ga0501037_0000083 3300049573 Bacteria 86322
219 Ga0501038_0000329 3300049574 Bacteria 40955
220 Ga0501038_0022409 3300049574 Bacteria 5661
221 Ga0501038_0032868 3300049574 Bacteria 4572
222 Ga0501039_0002998 3300049575 Bacteria 12619
223 Ga0501043_0002418 3300049579 Bacteria 15801
224 Ga0501043_0017594 3300049579 Bacteria 5604
225 Ga0501047_0002692 3300049581 Bacteria 16920
226 Ga0501070_0005200 3300049586 Bacteria 11088
227 Ga0501035_0000001 3300049822 Bacteria 1037138
228 Ga0501044_0000159 3300049823 Bacteria 83639
229 Ga0500556_0003471 3300053104 Bacteria 4631
230 Ga0500616_0016183 3300053153 Bacteria 4251
231 Ga0466962_0000153 3300061719 Bacteria 28888

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047444 Ga0495675_0027915 Ga0495675_0027915_1461_3587 708
2 3300048905 Ga0496102_0062542 Ga0496102_0062542_1214_3379 721
3 3300046679 Ga0495623_0040071 Ga0495623_0040071_808_2976 722
4 3300049569 Ga0501032_0000504 Ga0501032_0000504_23460_25745 732
5 3300049570 Ga0501033_0000003 Ga0501033_0000003_51432_53717 732
6 3300013307 Ga0157372_10014289 Ga0157372_100142896 733
7 3300005548 Ga0070665_100000005 Ga0070665_100000005250 735
8 3300028379 Ga0268266_10000012 Ga0268266_10000012400 735
9 3300039447 Ga0436361_0994023 Ga0436361_0994023_4742_6952 735
10 3300048909 Ga0496106_0030455 Ga0496106_0030455_1729_3936 735
11 3300005338 Ga0068868_100019130 Ga0068868_1000191302 736
12 3300005354 Ga0070675_100013175 Ga0070675_1000131752 736
13 3300005468 Ga0070707_100037631 Ga0070707_1000376312 736
14 3300006175 Ga0070712_100037521 Ga0070712_1000375212 736
15 3300025916 Ga0207663_10017712 Ga0207663_100177122 736
16 3300027876 Ga0209974_10013027 Ga0209974_100130272 736
17 3300021384 Ga0213876_10021735 Ga0213876_100217352 742
18 3300039437 Ga0436365_0843245 Ga0436365_0843245_4055_6379 742
19 3300025315 Ga0207697_10014861 Ga0207697_100148611 746
20 3300005445 Ga0070708_100038756 Ga0070708_1000387562 748
21 3300005290 Ga0065712_10008781 Ga0065712_100087811 749
22 3300005329 Ga0070683_100013801 Ga0070683_1000138011 749
23 3300005339 Ga0070660_100010659 Ga0070660_1000106595 749
24 3300005344 Ga0070661_100017032 Ga0070661_1000170323 749
25 3300005354 Ga0070675_100005525 Ga0070675_1000055257 749
26 3300005365 Ga0070688_100012161 Ga0070688_1000121612 749
27 3300005435 Ga0070714_100020315 Ga0070714_1000203153 749
28 3300005437 Ga0070710_10007997 Ga0070710_100079972 749
29 3300005535 Ga0070684_100000339 Ga0070684_1000003396 749
30 3300005549 Ga0070704_100000846 Ga0070704_1000008466 749
31 3300005617 Ga0068859_100022585 Ga0068859_1000225854 749
32 3300005841 Ga0068863_100014311 Ga0068863_1000143112 749
33 3300005842 Ga0068858_100009463 Ga0068858_1000094636 749
34 3300005985 Ga0081539_10005093 Ga0081539_100050933 749
35 3300006163 Ga0070715_10017365 Ga0070715_100173651 749
36 3300006931 Ga0097620_100022585 Ga0097620_1000225854 749
37 3300014745 Ga0157377_10016923 Ga0157377_100169233 749
38 3300014968 Ga0157379_10001744 Ga0157379_100017449 749
39 3300025315 Ga0207697_10006063 Ga0207697_100060632 749
40 3300025904 Ga0207647_10002927 Ga0207647_100029272 749
41 3300025926 Ga0207659_10004109 Ga0207659_100041093 749
42 3300025928 Ga0207700_10016176 Ga0207700_100161762 749
43 3300025932 Ga0207690_10007503 Ga0207690_100075034 749
44 3300035725 Ga0373947_0018552 Ga0373947_0018552_122_2476 749
45 3300046454 Ga0495592_0027986 Ga0495592_0027986_384_2786 749
46 3300046543 Ga0495645_0010305 Ga0495645_0010305_3946_6300 749
47 3300046680 Ga0495646_0003991 Ga0495646_0003991_3439_5793 749
48 3300047317 Ga0495604_0045847 Ga0495604_0045847_20_2422 749
49 3300047319 Ga0495674_0074873 Ga0495674_0074873_373_2727 749
50 3300047471 Ga0495684_0028204 Ga0495684_0028204_1223_3625 749
51 3300048907 Ga0496104_0008942 Ga0496104_0008942_1781_4135 749
52 3300048911 Ga0496108_0028411 Ga0496108_0028411_1391_3745 749
53 3300048913 Ga0496110_0014415 Ga0496110_0014415_1137_3491 749
54 3300048916 Ga0496113_0005338 Ga0496113_0005338_191_2545 749
55 3300048917 Ga0496114_0013171 Ga0496114_0013171_2672_5026 749
56 3300048918 Ga0496115_0000424 Ga0496115_0000424_24270_26624 749
57 3300005985 Ga0081539_10002662 Ga0081539_100026624 752
58 3300005536 Ga0070697_100000972 Ga0070697_10000097217 753
59 3300005536 Ga0070697_100012199 Ga0070697_1000121993 754
60 3300006028 Ga0070717_10004539 Ga0070717_100045395 754
61 3300006028 Ga0070717_10003198 Ga0070717_100031987 755
62 3300048918 Ga0496115_0018467 Ga0496115_0018467_1825_4122 755
63 iso_pu_bacteria 2786546548 2787508617 756
64 3300001991 JGI24743J22301_10000044 JGI24743J22301_100000444 758
65 3300002155 JGI24033J26618_1000066 JGI24033J26618_100006612 758
66 3300003320 rootH2_10011145 rootH2_100111458 758
67 3300003323 rootH1_10001752 rootH1_100017525 758
68 3300005344 Ga0070661_100000479 Ga0070661_10000047923 758
69 3300005471 Ga0070698_100009880 Ga0070698_1000098803 758
70 3300005518 Ga0070699_100026278 Ga0070699_1000262783 758
71 3300005536 Ga0070697_100003586 Ga0070697_1000035866 758
72 3300005614 Ga0068856_100000537 Ga0068856_10000053727 758
73 3300013297 Ga0157378_10000857 Ga0157378_100008573 758
74 3300025920 Ga0207649_10000427 Ga0207649_1000042714 758
75 3300025939 Ga0207665_10015535 Ga0207665_100155353 758
76 3300026078 Ga0207702_10003806 Ga0207702_100038067 758
77 3300037312 Ga0395899_0000015 Ga0395899_0000015_374861_377146 758
78 3300037466 Ga0395898_0000051 Ga0395898_0000051_120558_122843 758
79 3300044683 Ga0466965_0007338 Ga0466965_0007338_942_3227 758
80 3300044719 Ga0466971_0000025 Ga0466971_0000025_30421_32706 758
81 3300044842 Ga0466957_0004581 Ga0466957_0004581_826_3111 758
82 3300045976 Ga0466967_0052694 Ga0466967_0052694_1215_3500 758
83 3300049568 Ga0501031_0000968 Ga0501031_0000968_14843_17128 758
84 3300049570 Ga0501033_0000083 Ga0501033_0000083_27689_29974 758
85 3300049573 Ga0501037_0000083 Ga0501037_0000083_51472_53757 758
86 3300049574 Ga0501038_0000329 Ga0501038_0000329_30804_33089 758
87 3300049574 Ga0501038_0022409 Ga0501038_0022409_1339_3624 758
88 3300049574 Ga0501038_0032868 Ga0501038_0032868_1895_4180 758
89 3300049575 Ga0501039_0002998 Ga0501039_0002998_6127_8412 758
90 3300049579 Ga0501043_0002418 Ga0501043_0002418_2415_4700 758
91 3300049579 Ga0501043_0017594 Ga0501043_0017594_2415_4700 758
92 3300049581 Ga0501047_0002692 Ga0501047_0002692_12920_15205 758
93 3300049586 Ga0501070_0005200 Ga0501070_0005200_6892_9177 758
94 3300049822 Ga0501035_0000001 Ga0501035_0000001_496495_498780 758
95 3300049823 Ga0501044_0000159 Ga0501044_0000159_41224_43509 758
96 3300053104 Ga0500556_0003471 Ga0500556_0003471_768_3053 758
97 3300061719 Ga0466962_0000153 Ga0466962_0000153_317_2602 758
98 3300005436 Ga0070713_100021743 Ga0070713_1000217433 760
99 3300005471 Ga0070698_100002050 Ga0070698_1000020505 760
100 3300005518 Ga0070699_100032130 Ga0070699_1000321302 760
101 3300005536 Ga0070697_100004257 Ga0070697_1000042578 760
102 3300005539 Ga0068853_100000007 Ga0068853_100000007166 760
103 3300005841 Ga0068863_100003908 Ga0068863_10000390813 760
104 3300009093 Ga0105240_10079006 Ga0105240_100790063 760
105 3300021361 Ga0213872_10000551 Ga0213872_1000055112 760
106 3300021361 Ga0213872_10012166 Ga0213872_100121662 760
107 3300025913 Ga0207695_10007538 Ga0207695_100075383 760
108 3300025928 Ga0207700_10002264 Ga0207700_100022643 760
109 3300025928 Ga0207700_10037761 Ga0207700_100377613 760
110 3300026041 Ga0207639_10000001 Ga0207639_1000000157 760
111 3300026088 Ga0207641_10001243 Ga0207641_100012433 760
112 3300030521 Ga0307511_10000129 Ga0307511_1000012918 760
113 3300037853 Ga0436364_1380676 Ga0436364_1380676_1914_4211 760
114 3300039437 Ga0436365_0539406 Ga0436365_0539406_34403_36709 760
115 3300039438 Ga0436360_0602887 Ga0436360_0602887_321_2627 760
116 3300039438 Ga0436360_0660138 Ga0436360_0660138_3054_5351 760
117 3300039447 Ga0436361_0118679 Ga0436361_0118679_19691_21988 760
118 3300039447 Ga0436361_0819850 Ga0436361_0819850_1545_3932 760
119 3300039447 Ga0436361_0890542 Ga0436361_0890542_115_2421 760
120 3300039450 Ga0436363_1312924 Ga0436363_1312924_4756_7062 760
121 3300053153 Ga0500616_0016183 Ga0500616_0016183_815_3109 760
122 3300006237 Ga0097621_100021086 Ga0097621_1000210862 762
123 3300006358 Ga0068871_100011771 Ga0068871_1000117714 762
124 3300005331 Ga0070670_100061429 Ga0070670_1000614292 763
125 3300005335 Ga0070666_10049824 Ga0070666_100498242 763
126 3300005367 Ga0070667_100011964 Ga0070667_1000119642 763
127 3300013306 Ga0163162_10061200 Ga0163162_100612002 763
128 3300013308 Ga0157375_10001835 Ga0157375_100018357 763
129 3300025903 Ga0207680_10027449 Ga0207680_100274492 763
130 3300031240 Ga0265320_10011323 Ga0265320_100113232 763
131 3300048907 Ga0496104_0088145 Ga0496104_0088145_396_2696 763
132 3300048908 Ga0496105_0019035 Ga0496105_0019035_2728_5028 763
133 3300003203 JGI25406J46586_10000002 JGI25406J46586_10000002191 764
134 3300005293 Ga0065715_10002858 Ga0065715_100028584 764
135 3300005295 Ga0065707_10003406 Ga0065707_100034066 764
136 3300005347 Ga0070668_100002801 Ga0070668_1000028018 764
137 3300005354 Ga0070675_100002080 Ga0070675_1000020807 764
138 3300005367 Ga0070667_100016903 Ga0070667_1000169034 764
139 3300005457 Ga0070662_100055711 Ga0070662_1000557112 764
140 3300005467 Ga0070706_100006760 Ga0070706_1000067602 764
141 3300005467 Ga0070706_100036970 Ga0070706_1000369703 764
142 3300005545 Ga0070695_100017423 Ga0070695_1000174232 764
143 3300005985 Ga0081539_10000061 Ga0081539_10000061194 764
144 3300006175 Ga0070712_100006123 Ga0070712_1000061232 764
145 3300013306 Ga0163162_10010219 Ga0163162_100102193 764
146 3300017792 Ga0163161_10002616 Ga0163161_100026165 764
147 3300025315 Ga0207697_10000151 Ga0207697_1000015121 764
148 3300025901 Ga0207688_10002615 Ga0207688_100026155 764
149 3300025915 Ga0207693_10004670 Ga0207693_100046706 764
150 3300025916 Ga0207663_10003000 Ga0207663_100030002 764
151 3300025926 Ga0207659_10019633 Ga0207659_100196332 764
152 3300025931 Ga0207644_10006288 Ga0207644_100062883 764
153 3300025933 Ga0207706_10005196 Ga0207706_100051969 764
154 3300025933 Ga0207706_10008416 Ga0207706_100084163 764
155 3300025939 Ga0207665_10047121 Ga0207665_100471212 764
156 3300035091 Ga0373951_0005766 Ga0373951_0005766_247_2544 764
157 3300048904 Ga0496101_0001708 Ga0496101_0001708_4892_7189 764
158 3300048909 Ga0496106_0003012 Ga0496106_0003012_3353_5650 764
159 3300048910 Ga0496107_0001726 Ga0496107_0001726_5476_7773 764
160 3300048913 Ga0496110_0027035 Ga0496110_0027035_2199_4496 764
161 3300048915 Ga0496112_0005693 Ga0496112_0005693_6677_9007 764
162 3300048915 Ga0496112_0023801 Ga0496112_0023801_813_3143 764
163 3300048918 Ga0496115_0004076 Ga0496115_0004076_7057_9354 764
164 3300048928 Ga0496125_0000029 Ga0496125_0000029_324464_326791 764
165 3300000545 CNXas_1000034 CNXas_100003411 765
166 3300005328 Ga0070676_10001419 Ga0070676_100014195 765
167 3300005331 Ga0070670_100028061 Ga0070670_1000280613 765
168 3300005340 Ga0070689_100009358 Ga0070689_1000093583 765
169 3300005343 Ga0070687_100002579 Ga0070687_1000025792 765
170 3300005353 Ga0070669_100003642 Ga0070669_1000036428 765
171 3300005355 Ga0070671_100036377 Ga0070671_1000363772 765
172 3300005356 Ga0070674_100003465 Ga0070674_1000034657 765
173 3300005439 Ga0070711_100067475 Ga0070711_1000674752 765
174 3300005445 Ga0070708_100002835 Ga0070708_1000028355 765
175 3300005445 Ga0070708_100013589 Ga0070708_1000135893 765
176 3300005457 Ga0070662_100003227 Ga0070662_1000032275 765
177 3300005467 Ga0070706_100000072 Ga0070706_10000007256 765
178 3300005467 Ga0070706_100013428 Ga0070706_1000134285 765
179 3300005467 Ga0070706_100028652 Ga0070706_1000286524 765
180 3300005468 Ga0070707_100008581 Ga0070707_1000085812 765
181 3300005468 Ga0070707_100016930 Ga0070707_1000169305 765
182 3300005468 Ga0070707_100021256 Ga0070707_1000212562 765
183 3300005471 Ga0070698_100002781 Ga0070698_10000278114 765
184 3300005536 Ga0070697_100003517 Ga0070697_1000035176 765
185 3300005536 Ga0070697_100010931 Ga0070697_1000109316 765
186 3300005536 Ga0070697_100014655 Ga0070697_1000146552 765
187 3300005548 Ga0070665_100013354 Ga0070665_1000133543 765
188 3300005937 Ga0081455_10001013 Ga0081455_1000101320 765
189 3300005937 Ga0081455_10001733 Ga0081455_1000173326 765
190 3300005937 Ga0081455_10067801 Ga0081455_100678012 765
191 3300005983 Ga0081540_1000219 Ga0081540_100021913 765
192 3300009147 Ga0114129_10008097 Ga0114129_100080977 765
193 3300009553 Ga0105249_10007377 Ga0105249_100073774 765
194 3300010375 Ga0105239_10005383 Ga0105239_100053838 765
195 3300013306 Ga0163162_10004036 Ga0163162_100040368 765
196 3300013306 Ga0163162_10005848 Ga0163162_100058485 765
197 3300013308 Ga0157375_10069070 Ga0157375_100690702 765
198 3300017792 Ga0163161_10064683 Ga0163161_100646832 765
199 3300025315 Ga0207697_10000198 Ga0207697_100001986 765
200 3300025315 Ga0207697_10001147 Ga0207697_100011473 765
201 3300025907 Ga0207645_10000634 Ga0207645_1000063419 765
202 3300025907 Ga0207645_10004095 Ga0207645_100040954 765
203 3300025907 Ga0207645_10004666 Ga0207645_100046663 765
204 3300025910 Ga0207684_10000043 Ga0207684_10000043177 765
205 3300025910 Ga0207684_10004711 Ga0207684_100047117 765
206 3300025910 Ga0207684_10015099 Ga0207684_100150992 765
207 3300025910 Ga0207684_10078547 Ga0207684_100785471 765
208 3300025915 Ga0207693_10008051 Ga0207693_100080513 765
209 3300025918 Ga0207662_10005639 Ga0207662_100056392 765
210 3300025922 Ga0207646_10006659 Ga0207646_100066594 765
211 3300025922 Ga0207646_10012717 Ga0207646_100127174 765
212 3300025923 Ga0207681_10014018 Ga0207681_100140184 765
213 3300025926 Ga0207659_10039677 Ga0207659_100396772 765
214 3300025931 Ga0207644_10006455 Ga0207644_100064552 765
215 3300025932 Ga0207690_10031516 Ga0207690_100315162 765
216 3300025933 Ga0207706_10000702 Ga0207706_1000070221 765
217 3300025936 Ga0207670_10020724 Ga0207670_100207242 765
218 3300025940 Ga0207691_10002095 Ga0207691_1000209515 765
219 3300025940 Ga0207691_10041100 Ga0207691_100411002 765
220 3300025972 Ga0207668_10006913 Ga0207668_100069135 765
221 3300025986 Ga0207658_10008718 Ga0207658_100087185 765
222 3300026023 Ga0207677_10009472 Ga0207677_100094722 765
223 3300026121 Ga0207683_10003358 Ga0207683_100033585 765
224 3300028381 Ga0268264_10064209 Ga0268264_100642092 765
225 3300036401 Ga0373937_0001540 Ga0373937_0001540_5165_7465 765
226 3300037418 Ga0395900_0042222 Ga0395900_0042222_637_3003 765
227 3300037418 Ga0395900_0047728 Ga0395900_0047728_1952_4318 765
228 3300038443 Ga0395901_0018296 Ga0395901_0018296_415_2781 765
229 3300045051 Ga0451576_0019910 Ga0451576_0019910_1355_3652 765
230 3300046462 Ga0495651_0004539 Ga0495651_0004539_5061_7361 765
231 3300047319 Ga0495674_0091093 Ga0495674_0091093_273_2573 765
232 3300047444 Ga0495675_0004714 Ga0495675_0004714_4899_7199 765

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01225

Mur_ligase

Mur ligase family, catalytic domain

42

141

0.96

PF02873

MurB_C

UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain

686

784

0.96

PF01565

FAD_binding_4

FAD binding domain

521

653

0.92

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

344

474

0.89

PF08245

Mur_ligase_M

Mur ligase middle domain

145

322

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1p3d-assembly2.cif.gz_B crystal structure of udp-n-acetylmuramic acid:l-alanine ligase (murc) in complex with uma and anp. 0.9481 15 462
6cau-assembly1.cif.gz_A udp-n-acetylmuramate--alanine ligase from acinetobacter baumannii ab5075-uw with amppnp 0.9417 15 319
2f00-assembly1.cif.gz_B escherichia coli murc 0.9388 9 462
4pyt-assembly1.cif.gz_A crystal structure of a murb family ep-udp-n-acetylglucosamine reductase 0.9333 465 763
1hsk-assembly1.cif.gz_A crystal structure of s. aureus murb 0.9301 464 764
ID Description Score Start End Superfamily
1gqqB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9666 21 104 3.40.50.720
3tx1A03 Alpha Beta;Alpha-Beta Complex;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 1;UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 0.9656 686 765 3.90.78.10
af_P9WJL7_8_102_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9634 18 104 3.40.50.720
af_P17952_10_107_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9587 15 105 3.40.50.720
2f00B02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Mur-like, catalytic domain 0.9448 108 319 3.40.1190.10
ID Description Score Start End GO Terms
AF-A0A7V9ZYG5-F1-model_v4 UDP-N-acetylenolpyruvoylglucosamine reductase 0.9839 4 200 GO:0005524
GO:0009058
GO:0016881
AF-A0A7R9NG71-F1-model_v4 deleted 0.9798 18 95
AF-X1F496-F1-model_v4 UDP-N-acetylenolpyruvoylglucosamine reductase C-terminal domain-containing protein 0.977 686 763 GO:0005829
GO:0008762
GO:0050660
GO:0071555
AF-A0A3D3RNP4-F1-model_v4 UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8) 0.972 18 250 GO:0005524
GO:0008763
GO:0009058
AF-A0A6G8PXB3-F1-model_v4 Mur ligase N-terminal catalytic domain-containing protein 0.972 19 106 GO:0009058
GO:0016881

Feature Viewer

pLDDT pTM Quality
89.35 0.81 High
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Predicted Structure (AlphaFold2)

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