F343147

General Info

Members Datasets Scaffolds Average Seq Length
230 184 229 1148

Family's Representative Sequence

Representative Sequence 3300031241|Ga0265325_10000340|Ga0265325_100003404
Length 1244
Sequence MNAWGGQEAHEMPSPLITSTLAEHTGLTAEALASADVEVEPLGSLLPPEGVTAARIRDVVQRAKAIAGVASTRVDVAGVRGSAGPAVAAAFARAGRRVVFITCDSDSARRAAQDAGFFMRGALDDEAEDTGEGEVLLFAANESSPYADVSPDRAAAMSRMATLFHLAHERAWSLVAVPATALLRKVVPRAELERRADRIAAEQEIDRDALVRTLSEAGYLRVPVVEDRGSFAVRGALLDIWPPSSDLPVRVELYGELVLSMKPFDPGDQTTKKGAPDVKELWLSPVREAILDSGNVARARARITNMAESIDWPTSKTRTLVDDVVSGRAFFGAEGFLPAYYEALEPLLAYVPQDAVVVLDDPPSITRAVRDELARADADAKHKAGSGPSFSPSEYYLDEGRVAADLASRTLIVLHRTPVTGGAEGGLGTFETAQQPLDLASRDNEDLTRAVKAARSSRGKNAGLAPLVRRIVHWREHGLAVFLAARAQTQAERLVTLLGHQGVLCKARLSAFDPRWLDQPAEHVQVVVGPLARGVILPADGLVLVTEEEIFGSRVHRRRERARSADKARTFLEDLRSLAPGDYVVHVEHGIGRYHGLAHKKVSGLTVDLIAIEYAGGDKLYLPVWRLNQLEKYAGGENAQPKLDRLGGSSFTRTKARVAREVRKMADELLRLYAERHAARADPLVPADDDYRAFEATFPYDETADQARAIDEVNKDLESTRPMDRLVCGDVGFGKTEVALRAAFRTAMGGRQVALLCPTTVLAAQHFRTLETRMAGYPIVVRALSRFQTKKEQEETVLGLREGNVDVVVGTHRLLSKDVHFKRLGLLVVDEEQRFGVTHKERIKQLRAQVDVLTLTATPIPRTLQMAVSGVRDLSLITTPPVDRRAVRTIVTRWDEQVVREAIERELARGGQCFYVYNRIEKLYEKAHRVQELVPAARVAVAHGQMGEASLEETMLDFVDGRYDVLASTAIIESGLDIPRANTMIIDRADLFGLAQLYQLRGRVGRGKERAYCYLVVPPENAMSDEARSRIEALERHTELGSGFQIASLDLELRGAGDLLGAEQSGNVASVGLDMFCRMLEDAVHELGGEEVSHEVDPELSFDVEALLPDDYVNDVGIRLSLYKRLASAVDEGHVSEIGAEMEDRFGAPPEAARRLVKLMSLKTELRRMRALGCEASEQSVILHLRDDTPLDPEKIMALIKKTRGAWKLTPDMRLSRRFESGGDGLANAESALAELAKCTKDAA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
57 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
58 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
97 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
98 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
99 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
100 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
101 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
102 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
103 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
104 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
105 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
106 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
107 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
108 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
109 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
110 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
115 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
122 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
123 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
124 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
125 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
126 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
132 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
133 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
143 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
144 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
157 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
164 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
165 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
166 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
167 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
168 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
169 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
170 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
171 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
172 3300049770 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control Metagenome Rhizosphere
173 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
180 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
181 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
182 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
183 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
184 8015556637 Bdellovibrio reynosensis LBG001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.57
Metatranscriptomes 0
Isolates 0.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.22
Nodule 0
Rhizoplane 0.87
Rhizosphere 88.7
Stem 0
Stem Tuber 0
Unclassified 5.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1874099 2162886007 Bacteria 355736
2 JGI25406J46586_10000218 3300003203 Bacteria 25360
3 JGI25153J46596_10000012 3300003215 Bacteria 308056
4 Ga0065704_10070138 3300005289 Bacteria 546071
5 Ga0070658_10003760 3300005327 Bacteria 12421
6 Ga0070690_100000988 3300005330 Bacteria 14464
7 Ga0070682_100002344 3300005337 Bacteria 10479
8 Ga0070660_100002329 3300005339 Bacteria 13052
9 Ga0070689_100000016 3300005340 Bacteria 166984
10 Ga0070691_10006019 3300005341 Bacteria 5537
11 Ga0070687_100006265 3300005343 Bacteria 4870
12 Ga0070661_100002690 3300005344 Bacteria 12171
13 Ga0070668_100001675 3300005347 Bacteria 16055
14 Ga0070669_100002321 3300005353 Bacteria 13764
15 Ga0070674_100000785 3300005356 Bacteria 16304
16 Ga0070688_100001037 3300005365 Bacteria 13970
17 Ga0070659_100006498 3300005366 Bacteria 8439
18 Ga0070700_100000912 3300005441 Bacteria 14591
19 Ga0070700_100001872 3300005441 Bacteria 10622
20 Ga0070708_100023604 3300005445 Bacteria 5233
21 Ga0070681_10003068 3300005458 Bacteria 15492
22 Ga0068867_100001134 3300005459 Bacteria 18198
23 Ga0068867_100001606 3300005459 Bacteria 15701
24 Ga0070685_10000446 3300005466 Bacteria 24072
25 Ga0070707_100000086 3300005468 Bacteria 83126
26 Ga0070707_100020114 3300005468 Bacteria 6295
27 Ga0070707_100030216 3300005468 Bacteria 5156
28 Ga0070698_100024878 3300005471 Bacteria 6242
29 Ga0070679_100002843 3300005530 Bacteria 15732
30 Ga0070679_100017513 3300005530 Bacteria 6935
31 Ga0070697_100015837 3300005536 Bacteria 5924
32 Ga0070686_100000027 3300005544 Bacteria 123854
33 Ga0070695_100015076 3300005545 Bacteria 4665
34 Ga0070665_100045089 3300005548 Bacteria 4427
35 Ga0068855_100000100 3300005563 Bacteria 105681
36 Ga0070702_100001028 3300005615 Bacteria 11062
37 Ga0068859_100000015 3300005617 Bacteria 271458
38 Ga0068859_100000617 3300005617 Bacteria 35639
39 Ga0068866_10003315 3300005718 Bacteria 6613
40 Ga0068862_100019847 3300005844 Bacteria 5612
41 Ga0081455_10001736 3300005937 Bacteria 26344
42 Ga0081455_10004908 3300005937 Bacteria 14821
43 Ga0081539_10000115 3300005985 Bacteria 188623
44 Ga0081539_10002250 3300005985 Bacteria 28081
45 Ga0070717_10001331 3300006028 Bacteria 16951
46 Ga0075432_10000670 3300006058 Bacteria 10526
47 Ga0075430_100001563 3300006846 Bacteria 18741
48 Ga0075429_100001294 3300006880 Bacteria 20408
49 Ga0097620_100000015 3300006931 Bacteria 271458
50 Ga0097620_100000617 3300006931 Bacteria 35639
51 Ga0105240_10001587 3300009093 Bacteria 38589
52 Ga0105240_10027368 3300009093 Bacteria 7464
53 Ga0111539_10000267 3300009094 Bacteria 62144
54 Ga0105245_10005730 3300009098 Bacteria 10904
55 Ga0114129_10004661 3300009147 Bacteria 19360
56 Ga0114129_10017083 3300009147 Bacteria 10332
57 Ga0114129_10050569 3300009147 Bacteria 5838
58 Ga0105243_10001695 3300009148 Bacteria 18984
59 Ga0105241_10008846 3300009174 Bacteria 7403
60 Ga0105242_10004372 3300009176 Bacteria 10996
61 Ga0105248_10033365 3300009177 Bacteria 5751
62 Ga0105249_10010447 3300009553 Bacteria 8157
63 Ga0105239_10010488 3300010375 Bacteria 10357
64 Ga0105246_10000268 3300011119 Bacteria 27115
65 Ga0157371_10019009 3300013102 Bacteria 5073
66 Ga0157370_10006694 3300013104 Bacteria 12649
67 Ga0157375_10019065 3300013308 Bacteria 6230
68 Ga0213872_10000577 3300021361 Bacteria 28396
69 Ga0213875_10001353 3300021388 Bacteria 16133
70 Ga0209148_1000947 3300025254 Bacteria 19052
71 Ga0209455_1003243 3300025272 Bacteria 5866
72 Ga0209758_1000059 3300025297 Bacteria 328458
73 Ga0209050_1002314 3300025298 Bacteria 16763
74 Ga0209257_1000114 3300025304 Bacteria 233013
75 Ga0207645_10000484 3300025907 Bacteria 32926
76 Ga0207695_10004584 3300025913 Bacteria 18780
77 Ga0207695_10021059 3300025913 Bacteria 7448
78 Ga0207662_10000741 3300025918 Bacteria 14943
79 Ga0207657_10005653 3300025919 Bacteria 13046
80 Ga0207652_10005409 3300025921 Bacteria 10359
81 Ga0207646_10000002 3300025922 Bacteria 550880
82 Ga0207664_10000728 3300025929 Bacteria 22375
83 Ga0207690_10007240 3300025932 Bacteria 6588
84 Ga0207706_10000843 3300025933 Bacteria 31668
85 Ga0207670_10000185 3300025936 Bacteria 41343
86 Ga0207669_10003912 3300025937 Bacteria 6497
87 Ga0207691_10000421 3300025940 Bacteria 42154
88 Ga0207711_10018669 3300025941 Bacteria 5766
89 Ga0207689_10015177 3300025942 Bacteria 6525
90 Ga0207679_10001813 3300025945 Bacteria 13301
91 Ga0207667_10000207 3300025949 Bacteria 83420
92 Ga0207658_10007581 3300025986 Bacteria 7393
93 Ga0207677_10004434 3300026023 Bacteria 7536
94 Ga0207708_10000039 3300026075 Bacteria 133321
95 Ga0207702_10013585 3300026078 Bacteria 6762
96 Ga0207648_10000758 3300026089 Bacteria 36268
97 Ga0207674_10015413 3300026116 Bacteria 8397
98 Ga0207674_10040726 3300026116 Bacteria 4810
99 Ga0207683_10000107 3300026121 Bacteria 67852
100 Ga0209969_1000049 3300027360 Bacteria 13820
101 Ga0209996_1000102 3300027395 Bacteria 11489
102 Ga0209984_1000056 3300027424 Bacteria 11719
103 Ga0210000_1000150 3300027462 Bacteria 9812
104 Ga0209995_1000030 3300027471 Bacteria 22451
105 Ga0210002_1000012 3300027617 Bacteria 29099
106 Ga0209971_1000326 3300027682 Bacteria 13119
107 Ga0209966_1000067 3300027695 Bacteria 46724
108 Ga0209998_10000048 3300027717 Bacteria 48696
109 Ga0209974_10000070 3300027876 Bacteria 27341
110 Ga0207428_10000110 3300027907 Bacteria 111885
111 Ga0207428_10001260 3300027907 Bacteria 27117
112 Ga0265337_1000206 3300028556 Bacteria 31602
113 Ga0265337_1000829 3300028556 Bacteria 16242
114 Ga0265319_1000284 3300028563 Bacteria 37841
115 Ga0265334_10003155 3300028573 Bacteria 7523
116 Ga0265318_10000300 3300028577 Bacteria 40163
117 Ga0265338_10038638 3300028800 Bacteria 4517
118 Ga0265324_10000028 3300029957 Bacteria 143704
119 Ga0265332_10002087 3300031238 Bacteria 10408
120 Ga0265325_10000340 3300031241 Bacteria 33088
121 Ga0265329_10000578 3300031242 Bacteria 18938
122 Ga0265340_10003190 3300031247 Bacteria 9298
123 Ga0265340_10004449 3300031247 Bacteria 7832
124 Ga0265316_10000595 3300031344 Bacteria 40411
125 Ga0265313_10000002 3300031595 Bacteria 205344
126 Ga0265313_10000313 3300031595 Bacteria 52807
127 Ga0265313_10009512 3300031595 Bacteria 6296
128 Ga0307508_10002741 3300031616 Bacteria 18382
129 Ga0265314_10001684 3300031711 Bacteria 24061
130 Ga0307516_10004219 3300031730 Bacteria 17894
131 Ga0307407_10011185 3300031903 Bacteria 4260
132 Ga0307412_10010319 3300031911 Bacteria 5378
133 Ga0373954_0000693 3300035118 Bacteria 12919
134 Ga0373956_0001339 3300035119 Bacteria 10165
135 Ga0373925_0011082 3300037068 Bacteria 6547
136 Ga0395899_0027318 3300037312 Bacteria 4303
137 Ga0395905_0000007 3300037471 Bacteria 521849
138 Ga0395905_0004762 3300037471 Bacteria 14026
139 Ga0436364_0487847 3300037853 Bacteria 10393
140 Ga0395901_0009565 3300038443 Bacteria 9835
141 Ga0395901_0024561 3300038443 Bacteria 6188
142 Ga0400490_17979 3300038726 Bacteria 40691
143 Ga0436360_0118090 3300039438 Bacteria 17627
144 Ga0436361_0451626 3300039447 Bacteria 84847
145 Ga0436362_0149036 3300039453 Bacteria 4397
146 Ga0451849_1220008 3300041505 Bacteria 4664
147 Ga0451853_0505249 3300041512 Bacteria 4524
148 Ga0451577_0014103 3300042876 Bacteria 7454
149 Ga0451577_0024374 3300042876 Bacteria 5504
150 Ga0453683_0000142 3300044673 Bacteria 104837
151 Ga0453683_0008908 3300044673 Bacteria 6714
152 Ga0453684_0000006 3300044712 Bacteria 1364191
153 Ga0453684_0000399 3300044712 Bacteria 178812
154 Ga0453684_0001313 3300044712 Bacteria 73484
155 Ga0453684_0004721 3300044712 Bacteria 28186
156 Ga0453684_0010674 3300044712 Bacteria 15624
157 Ga0451576_0054001 3300045051 Bacteria 4207
158 Ga0495629_0028441 3300046459 Bacteria 3969
159 Ga0495657_0002324 3300046675 Bacteria 16011
160 Ga0495636_0006338 3300047318 Bacteria 4648
161 Ga0495680_0044056 3300047322 Bacteria 3530
162 Ga0496106_0016078 3300048909 Bacteria 5533
163 Ga0496110_0011436 3300048913 Bacteria 7263
164 Ga0496116_0000768 3300048919 Bacteria 40745
165 Ga0496117_0005857 3300048920 Bacteria 12720
166 Ga0496118_0005807 3300048921 Bacteria 13836
167 Ga0496124_0000001 3300048927 Bacteria 1747840
168 Ga0496126_0003611 3300048929 Bacteria 19350
169 Ga0501290_000109 3300049513 Bacteria 12204
170 Ga0501291_000327 3300049514 Bacteria 5868
171 Ga0501299_000107 3300049522 Bacteria 9111
172 Ga0501033_0003884 3300049570 Bacteria 12150
173 Ga0501036_0002706 3300049572 Bacteria 13992
174 Ga0501036_0005144 3300049572 Bacteria 10570
175 Ga0501037_0001483 3300049573 Bacteria 17168
176 Ga0501037_0003473 3300049573 Bacteria 11434
177 Ga0501037_0004746 3300049573 Bacteria 9882
178 Ga0501038_0020100 3300049574 Bacteria 6008
179 Ga0501038_0028763 3300049574 Bacteria 4934
180 Ga0501039_0001427 3300049575 Bacteria 17607
181 Ga0501039_0019624 3300049575 Bacteria 5183
182 Ga0501041_0002639 3300049577 Bacteria 10221
183 Ga0501042_0036452 3300049578 Bacteria 3489
184 Ga0501043_0004595 3300049579 Bacteria 11197
185 Ga0501043_0004613 3300049579 Bacteria 11179
186 Ga0501046_0000094 3300049580 Bacteria 96222
187 Ga0501046_0002367 3300049580 Bacteria 17735
188 Ga0501046_0025518 3300049580 Bacteria 4836
189 Ga0501046_0028070 3300049580 Bacteria 4587
190 Ga0501047_0001775 3300049581 Bacteria 20844
191 Ga0501047_0011618 3300049581 Bacteria 8329
192 Ga0501047_0012468 3300049581 Bacteria 8050
193 Ga0501048_0003972 3300049582 Bacteria 11233
194 Ga0501048_0005894 3300049582 Bacteria 9329
195 Ga0501067_0008891 3300049583 Bacteria 5565
196 Ga0501069_0000589 3300049585 Bacteria 16839
197 Ga0501070_0003696 3300049586 Bacteria 13228
198 Ga0501071_0019807 3300049587 Bacteria 4672
199 Ga0501072_0025897 3300049588 Bacteria 4570
200 Ga0501073_0003418 3300049589 Bacteria 11939
201 Ga0501073_0006884 3300049589 Bacteria 8458
202 Ga0501073_0016372 3300049589 Bacteria 5374
203 Ga0501074_0007019 3300049590 Bacteria 8131
204 Ga0501198_000750 3300049649 Bacteria 4052
205 Ga0501206_000106 3300049653 Bacteria 8731
206 Ga0501235_000553 3300049669 Bacteria 7488
207 Ga0501249_000592 3300049679 Bacteria 8457
208 Ga0501225_0004240 3300049705 Bacteria 4281
209 Ga0501234_000169 3300049707 Bacteria 8979
210 Ga0501080_0006443 3300049742 Bacteria 10539
211 Ga0501083_0000781 3300049744 Bacteria 20904
212 Ga0501271_000165 3300049768 Bacteria 5460
213 Ga0501273_000118 3300049770 Bacteria 5159
214 Ga0501035_0002416 3300049822 Bacteria 18267
215 Ga0501035_0003813 3300049822 Bacteria 14366
216 Ga0501035_0049952 3300049822 Bacteria 3749
217 Ga0501044_0002291 3300049823 Bacteria 21805
218 Ga0501044_0016730 3300049823 Bacteria 7873
219 nmdc:mga07m45_8312_c1 3300050496 Bacteria 5329
220 nmdc:mga05p37_46905_c1 3300050507 Bacteria 5313
221 nmdc:mga05p37_9024_c1 3300050507 Bacteria 11792
222 nmdc:mga08y16_101_c1 3300050511 Bacteria 72476
223 nmdc:mga0a205_12428_c1 3300050515 Bacteria 7876
224 nmdc:mga0sz30_309_c1 3300050516 Bacteria 18742
225 Ga0495601_0004577 3300053077 Bacteria 8000
226 Ga0500562_000204 3300053108 Bacteria 16090
227 Ga0500652_000470 3300053131 Bacteria 14285
228 Ga0500616_0002333 3300053153 Bacteria 15998
229 Ga0500616_0002498 3300053153 Bacteria 15222

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049649 Ga0501198_000750 Ga0501198_000750_596_3430 895
2 3300049578 Ga0501042_0036452 Ga0501042_0036452_17_2881 904
3 3300049822 Ga0501035_0049952 Ga0501035_0049952_17_2881 904
4 3300009147 Ga0114129_10004661 Ga0114129_1000466120 930
5 3300050507 nmdc:mga05p37_9024_c1 nmdc:mga05p37_9024_c1_15_2945 930
6 3300026116 Ga0207674_10015413 Ga0207674_100154132 939
7 3300047322 Ga0495680_0044056 Ga0495680_0044056_413_3481 971
8 3300049705 Ga0501225_0004240 Ga0501225_0004240_16_3147 993
9 3300049770 Ga0501273_000118 Ga0501273_000118_1899_5030 993
10 3300041512 Ga0451853_0505249 Ga0451853_0505249_1328_4453 1009
11 3300050507 nmdc:mga05p37_46905_c1 nmdc:mga05p37_46905_c1_783_4007 1010
12 3300049580 Ga0501046_0028070 Ga0501046_0028070_945_4208 1031
13 3300042876 Ga0451577_0024374 Ga0451577_0024374_501_3905 1040
14 3300044712 Ga0453684_0001313 Ga0453684_0001313_58244_61648 1040
15 3300044673 Ga0453683_0008908 Ga0453683_0008908_159_3404 1045
16 3300044673 Ga0453683_0000142 Ga0453683_0000142_36435_39824 1048
17 3300045051 Ga0451576_0054001 Ga0451576_0054001_366_3755 1048
18 3300005615 Ga0070702_100001028 Ga0070702_1000010288 1050
19 3300049513 Ga0501290_000109 Ga0501290_000109_6098_9415 1050
20 3300049514 Ga0501291_000327 Ga0501291_000327_71_3388 1050
21 3300049522 Ga0501299_000107 Ga0501299_000107_2965_6282 1050
22 3300049653 Ga0501206_000106 Ga0501206_000106_2112_5429 1050
23 3300049669 Ga0501235_000553 Ga0501235_000553_2790_6107 1050
24 3300049679 Ga0501249_000592 Ga0501249_000592_2007_5324 1050
25 3300049707 Ga0501234_000169 Ga0501234_000169_1609_4926 1050
26 3300049768 Ga0501271_000165 Ga0501271_000165_1168_4485 1050
27 3300025913 Ga0207695_10021059 Ga0207695_100210591 1052
28 3300037068 Ga0373925_0011082 Ga0373925_0011082_688_4035 1052
29 3300046675 Ga0495657_0002324 Ga0495657_0002324_11878_15204 1052
30 3300006846 Ga0075430_100001563 Ga0075430_1000015637 1056
31 3300049587 Ga0501071_0019807 Ga0501071_0019807_880_4218 1056
32 3300009176 Ga0105242_10004372 Ga0105242_100043729 1058
33 3300038726 Ga0400490_17979 Ga0400490_17979_18251_21652 1067
34 3300041505 Ga0451849_1220008 Ga0451849_1220008_1286_4597 1071
35 3300049573 Ga0501037_0004746 Ga0501037_0004746_6298_9699 1074
36 3300049575 Ga0501039_0019624 Ga0501039_0019624_1407_4808 1074
37 3300049572 Ga0501036_0002706 Ga0501036_0002706_9550_13152 1077
38 3300049574 Ga0501038_0028763 Ga0501038_0028763_31_3633 1077
39 3300049579 Ga0501043_0004595 Ga0501043_0004595_2158_5760 1077
40 3300049581 Ga0501047_0012468 Ga0501047_0012468_3869_7471 1077
41 3300049582 Ga0501048_0003972 Ga0501048_0003972_578_4180 1077
42 3300049589 Ga0501073_0016372 Ga0501073_0016372_542_4144 1077
43 3300049590 Ga0501074_0007019 Ga0501074_0007019_990_4592 1077
44 3300050515 nmdc:mga0a205_12428_c1 nmdc:mga0a205_12428_c1_1071_4526 1078
45 3300025929 Ga0207664_10000728 Ga0207664_100007284 1080
46 3300005937 Ga0081455_10001736 Ga0081455_1000173613 1081
47 3300005330 Ga0070690_100000988 Ga0070690_10000098811 1082
48 3300005339 Ga0070660_100002329 Ga0070660_1000023297 1082
49 3300005340 Ga0070689_100000016 Ga0070689_100000016159 1082
50 3300005341 Ga0070691_10006019 Ga0070691_100060193 1082
51 3300005343 Ga0070687_100006265 Ga0070687_1000062652 1082
52 3300005344 Ga0070661_100002690 Ga0070661_10000269011 1082
53 3300005347 Ga0070668_100001675 Ga0070668_1000016757 1082
54 3300005353 Ga0070669_100002321 Ga0070669_1000023215 1082
55 3300005356 Ga0070674_100000785 Ga0070674_1000007856 1082
56 3300005365 Ga0070688_100001037 Ga0070688_1000010373 1082
57 3300005366 Ga0070659_100006498 Ga0070659_1000064982 1082
58 3300005441 Ga0070700_100000912 Ga0070700_1000009125 1082
59 3300005441 Ga0070700_100001872 Ga0070700_1000018725 1082
60 3300005458 Ga0070681_10003068 Ga0070681_1000306811 1082
61 3300005459 Ga0068867_100001134 Ga0068867_1000011349 1082
62 3300005459 Ga0068867_100001606 Ga0068867_1000016065 1082
63 3300005466 Ga0070685_10000446 Ga0070685_1000044623 1082
64 3300005530 Ga0070679_100017513 Ga0070679_1000175135 1082
65 3300005544 Ga0070686_100000027 Ga0070686_100000027108 1082
66 3300005617 Ga0068859_100000617 Ga0068859_1000006175 1082
67 3300005718 Ga0068866_10003315 Ga0068866_100033155 1082
68 3300006058 Ga0075432_10000670 Ga0075432_100006709 1082
69 3300006931 Ga0097620_100000617 Ga0097620_10000061736 1082
70 3300009093 Ga0105240_10001587 Ga0105240_100015879 1082
71 3300009098 Ga0105245_10005730 Ga0105245_100057303 1082
72 3300009148 Ga0105243_10001695 Ga0105243_1000169510 1082
73 3300009174 Ga0105241_10008846 Ga0105241_100088464 1082
74 3300009177 Ga0105248_10033365 Ga0105248_100333651 1082
75 3300009553 Ga0105249_10010447 Ga0105249_100104476 1082
76 3300010375 Ga0105239_10010488 Ga0105239_100104885 1082
77 3300011119 Ga0105246_10000268 Ga0105246_1000026822 1082
78 3300025907 Ga0207645_10000484 Ga0207645_1000048411 1082
79 3300025913 Ga0207695_10004584 Ga0207695_100045842 1082
80 3300025918 Ga0207662_10000741 Ga0207662_1000074111 1082
81 3300025919 Ga0207657_10005653 Ga0207657_100056537 1082
82 3300025932 Ga0207690_10007240 Ga0207690_100072403 1082
83 3300025933 Ga0207706_10000843 Ga0207706_1000084326 1082
84 3300025936 Ga0207670_10000185 Ga0207670_1000018510 1082
85 3300025937 Ga0207669_10003912 Ga0207669_100039123 1082
86 3300025940 Ga0207691_10000421 Ga0207691_1000042126 1082
87 3300025941 Ga0207711_10018669 Ga0207711_100186691 1082
88 3300025942 Ga0207689_10015177 Ga0207689_100151775 1082
89 3300025945 Ga0207679_10001813 Ga0207679_1000181310 1082
90 3300025986 Ga0207658_10007581 Ga0207658_100075815 1082
91 3300026075 Ga0207708_10000039 Ga0207708_10000039110 1082
92 3300026089 Ga0207648_10000758 Ga0207648_1000075813 1082
93 3300026121 Ga0207683_10000107 Ga0207683_1000010747 1082
94 3300027360 Ga0209969_1000049 Ga0209969_100004911 1082
95 3300027395 Ga0209996_1000102 Ga0209996_10001022 1082
96 3300027424 Ga0209984_1000056 Ga0209984_10000563 1082
97 3300027462 Ga0210000_1000150 Ga0210000_10001502 1082
98 3300027471 Ga0209995_1000030 Ga0209995_10000305 1082
99 3300027617 Ga0210002_1000012 Ga0210002_100001223 1082
100 3300027682 Ga0209971_1000326 Ga0209971_10003269 1082
101 3300027695 Ga0209966_1000067 Ga0209966_100006729 1082
102 3300027717 Ga0209998_10000048 Ga0209998_1000004819 1082
103 3300027876 Ga0209974_10000070 Ga0209974_1000007011 1082
104 3300027907 Ga0207428_10001260 Ga0207428_100012605 1082
105 3300047318 Ga0495636_0006338 Ga0495636_0006338_992_4438 1082
106 3300037853 Ga0436364_0487847 Ga0436364_0487847_519_4085 1083
107 3300049573 Ga0501037_0001483 Ga0501037_0001483_11075_14524 1083
108 3300049577 Ga0501041_0002639 Ga0501041_0002639_3311_6760 1083
109 3300049580 Ga0501046_0025518 Ga0501046_0025518_522_3971 1083
110 3300049588 Ga0501072_0025897 Ga0501072_0025897_756_4205 1083
111 3300049822 Ga0501035_0003813 Ga0501035_0003813_10320_13769 1083
112 3300048919 Ga0496116_0000768 Ga0496116_0000768_17035_20442 1084
113 3300048920 Ga0496117_0005857 Ga0496117_0005857_6199_9606 1084
114 3300048921 Ga0496118_0005807 Ga0496118_0005807_3229_6636 1084
115 3300026116 Ga0207674_10040726 Ga0207674_100407262 1087
116 3300005337 Ga0070682_100002344 Ga0070682_1000023443 1088
117 3300005445 Ga0070708_100023604 Ga0070708_1000236041 1089
118 3300005468 Ga0070707_100000086 Ga0070707_10000008625 1089
119 3300005468 Ga0070707_100020114 Ga0070707_1000201141 1089
120 3300005471 Ga0070698_100024878 Ga0070698_1000248782 1089
121 3300005536 Ga0070697_100015837 Ga0070697_1000158372 1089
122 3300005545 Ga0070695_100015076 Ga0070695_1000150762 1089
123 3300006028 Ga0070717_10001331 Ga0070717_1000133111 1089
124 3300006880 Ga0075429_100001294 Ga0075429_10000129412 1089
125 3300013308 Ga0157375_10019065 Ga0157375_100190653 1089
126 3300025922 Ga0207646_10000002 Ga0207646_10000002120 1089
127 3300053131 Ga0500652_000470 Ga0500652_000470_9584_13075 1089
128 3300009093 Ga0105240_10027368 Ga0105240_100273681 1090
129 3300003203 JGI25406J46586_10000218 JGI25406J46586_100002186 1091
130 3300005530 Ga0070679_100002843 Ga0070679_10000284312 1091
131 3300005985 Ga0081539_10000115 Ga0081539_1000011525 1091
132 3300021388 Ga0213875_10001353 Ga0213875_1000135312 1091
133 3300025921 Ga0207652_10005409 Ga0207652_100054092 1091
134 3300029957 Ga0265324_10000028 Ga0265324_1000002851 1093
135 3300049580 Ga0501046_0000094 Ga0501046_0000094_22737_26210 1094
136 3300003215 JGI25153J46596_10000012 JGI25153J46596_1000001241 1095
137 3300025297 Ga0209758_1000059 Ga0209758_1000059246 1095
138 3300042876 Ga0451577_0014103 Ga0451577_0014103_516_3995 1095
139 3300044712 Ga0453684_0000399 Ga0453684_0000399_139116_142595 1095
140 3300044712 Ga0453684_0010674 Ga0453684_0010674_3499_6993 1100
141 3300005617 Ga0068859_100000015 Ga0068859_10000001554 1102
142 3300006931 Ga0097620_100000015 Ga0097620_10000001554 1102
143 3300026023 Ga0207677_10004434 Ga0207677_100044344 1102
144 3300044712 Ga0453684_0000006 Ga0453684_0000006_516009_519461 1103
145 3300049570 Ga0501033_0003884 Ga0501033_0003884_4535_7981 1103
146 3300049572 Ga0501036_0005144 Ga0501036_0005144_5963_9409 1103
147 3300049573 Ga0501037_0003473 Ga0501037_0003473_4029_7475 1103
148 3300049574 Ga0501038_0020100 Ga0501038_0020100_457_3903 1103
149 3300049575 Ga0501039_0001427 Ga0501039_0001427_10494_13940 1103
150 3300049579 Ga0501043_0004613 Ga0501043_0004613_6995_10441 1103
151 3300049580 Ga0501046_0002367 Ga0501046_0002367_3635_7081 1103
152 3300049581 Ga0501047_0001775 Ga0501047_0001775_15144_18590 1103
153 3300049581 Ga0501047_0011618 Ga0501047_0011618_3902_7348 1103
154 3300049582 Ga0501048_0005894 Ga0501048_0005894_4614_8060 1103
155 3300049585 Ga0501069_0000589 Ga0501069_0000589_3729_7175 1103
156 3300049586 Ga0501070_0003696 Ga0501070_0003696_8674_12120 1103
157 3300049589 Ga0501073_0003418 Ga0501073_0003418_7875_11321 1103
158 3300049742 Ga0501080_0006443 Ga0501080_0006443_3960_7406 1103
159 3300049744 Ga0501083_0000781 Ga0501083_0000781_13008_16454 1103
160 3300049822 Ga0501035_0002416 Ga0501035_0002416_1683_5129 1103
161 3300049823 Ga0501044_0016730 Ga0501044_0016730_3703_7149 1103
162 3300009147 Ga0114129_10050569 Ga0114129_100505694 1106
163 3300028556 Ga0265337_1000206 Ga0265337_10002065 1107
164 3300028573 Ga0265334_10003155 Ga0265334_100031554 1107
165 3300028800 Ga0265338_10038638 Ga0265338_100386382 1107
166 3300035118 Ga0373954_0000693 Ga0373954_0000693_3172_6768 1107
167 3300035119 Ga0373956_0001339 Ga0373956_0001339_2077_5673 1107
168 3300005327 Ga0070658_10003760 Ga0070658_100037609 1108
169 3300005937 Ga0081455_10004908 Ga0081455_1000490812 1108
170 3300005548 Ga0070665_100045089 Ga0070665_1000450892 1109
171 3300005844 Ga0068862_100019847 Ga0068862_1000198472 1109
172 3300009147 Ga0114129_10017083 Ga0114129_100170836 1109
173 3300025298 Ga0209050_1002314 Ga0209050_100231415 1109
174 3300025304 Ga0209257_1000114 Ga0209257_1000114211 1109
175 3300049583 Ga0501067_0008891 Ga0501067_0008891_1280_4747 1109
176 3300049589 Ga0501073_0006884 Ga0501073_0006884_1645_5112 1109
177 3300049823 Ga0501044_0002291 Ga0501044_0002291_622_4089 1109
178 3300053153 Ga0500616_0002498 Ga0500616_0002498_2537_6004 1109
179 3300009094 Ga0111539_10000267 Ga0111539_1000026756 1111
180 3300027907 Ga0207428_10000110 Ga0207428_1000011023 1111
181 3300048909 Ga0496106_0016078 Ga0496106_0016078_1966_5445 1111
182 3300050511 nmdc:mga08y16_101_c1 nmdc:mga08y16_101_c1_49430_52903 1111
183 3300053108 Ga0500562_000204 Ga0500562_000204_11421_14885 1111
184 3300021361 Ga0213872_10000577 Ga0213872_100005779 1112
185 3300038443 Ga0395901_0009565 Ga0395901_0009565_2972_6532 1112
186 3300039447 Ga0436361_0451626 Ga0436361_0451626_2280_5783 1112
187 3300031595 Ga0265313_10009512 Ga0265313_100095121 1113
188 3300025254 Ga0209148_1000947 Ga0209148_100094711 1114
189 3300025272 Ga0209455_1003243 Ga0209455_10032432 1114
190 3300039453 Ga0436362_0149036 Ga0436362_0149036_28_3591 1114
191 3300053077 Ga0495601_0004577 Ga0495601_0004577_4072_7779 1115
192 3300005468 Ga0070707_100030216 Ga0070707_1000302162 1116
193 3300039438 Ga0436360_0118090 Ga0436360_0118090_1754_5242 1116
194 3300046459 Ga0495629_0028441 Ga0495629_0028441_367_3930 1116
195 3300038443 Ga0395901_0024561 Ga0395901_0024561_2610_6149 1117
196 3300050496 nmdc:mga07m45_8312_c1 nmdc:mga07m45_8312_c1_367_3858 1117
197 3300050516 nmdc:mga0sz30_309_c1 nmdc:mga0sz30_309_c1_11484_14975 1117
198 3300013104 Ga0157370_10006694 Ga0157370_100066943 1118
199 3300026078 Ga0207702_10013585 Ga0207702_100135853 1118
200 3300031730 Ga0307516_10004219 Ga0307516_1000421912 1118
201 3300037312 Ga0395899_0027318 Ga0395899_0027318_65_3640 1118
202 3300028556 Ga0265337_1000829 Ga0265337_10008292 1119
203 3300031616 Ga0307508_10002741 Ga0307508_100027414 1119
204 3300031903 Ga0307407_10011185 Ga0307407_100111852 1119
205 3300053153 Ga0500616_0002333 Ga0500616_0002333_11520_15017 1119
206 3300005985 Ga0081539_10002250 Ga0081539_1000225013 1120
207 3300028563 Ga0265319_1000284 Ga0265319_100028425 1133
208 3300028577 Ga0265318_10000300 Ga0265318_1000030017 1133
209 3300031238 Ga0265332_10002087 Ga0265332_100020878 1133
210 3300031242 Ga0265329_10000578 Ga0265329_100005788 1133
211 3300031247 Ga0265340_10004449 Ga0265340_100044492 1133
212 3300031595 Ga0265313_10000002 Ga0265313_100000026 1133
213 3300031711 Ga0265314_10001684 Ga0265314_100016847 1133
214 3300044712 Ga0453684_0004721 Ga0453684_0004721_7800_11357 1133
215 3300005563 Ga0068855_100000100 Ga0068855_10000010055 1135
216 3300025949 Ga0207667_10000207 Ga0207667_1000020726 1135
217 3300031911 Ga0307412_10010319 Ga0307412_100103193 1138
218 3300031241 Ga0265325_10000340 Ga0265325_100003404 1143
219 3300031247 Ga0265340_10003190 Ga0265340_100031903 1143
220 3300031344 Ga0265316_10000595 Ga0265316_1000059513 1143
221 3300031595 Ga0265313_10000313 Ga0265313_100003131 1143
222 3300037471 Ga0395905_0000007 Ga0395905_0000007_209569_213090 1159
223 3300013102 Ga0157371_10019009 Ga0157371_100190093 1168
224 iso_pu_bacteria 8015556637 8015559080 1169
225 3300037471 Ga0395905_0004762 Ga0395905_0004762_5057_8581 1172
226 3300048913 Ga0496110_0011436 Ga0496110_0011436_320_3850 1173
227 3300048927 Ga0496124_0000001 Ga0496124_0000001_919608_923138 1173
228 3300048929 Ga0496126_0003611 Ga0496126_0003611_1622_5143 1173
229 2162886007 SwRhRL2b_contig_1874099 SwRhRL2b_0707.00008780 1175
230 3300005289 Ga0065704_10070138 Ga0065704_10070138220 1175

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03461

TRCF

TRCF domain

1102

1196

0.98

PF02559

CarD_TRCF_RID

CarD-like/TRCF RID domain

578

634

0.97

PF17757

UvrB_inter

UvrB interaction domain

198

287

0.93

PF00271

Helicase_C

Helicase conserved C-terminal domain

896

1008

0.88

PF00270

DEAD

DEAD/DEAH box helicase

703

867

0.83

Feature Viewer

pLDDT pTM Quality
82.42 0.49 Low
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Predicted Structure (AlphaFold2)

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