F342355

General Info

Members Datasets Scaffolds Average Seq Length
229 177 218 383

Family's Representative Sequence

Representative Sequence 3300047443|Ga0495687_007738|Ga0495687_007738_2165_3502
Length 445
Sequence MAAAQSGPCRILGQANRAGLFKSIWEAFRFARIFSGPEAAAASPCQANRQADIPACEEQQMKSGHPETAQAGIARPQHGPRIVVVYSQRPSGNPQGHEATSQNHIAARVAALLGYSYAGEYDAAARYDLPLYFVPRETIPDAVHAARLGLRSEHDLFGGVVPQPYVASKVITHPLPLADCAAPAAWSHAFGEQVHDVVLPGYSAFSREDALRAGRQLLAQGAVRIKLASGIGGSDQSVAADLAALEQQIGALDEAQLRLGGVVLERNLNDVVTHSVGQVRIGRQVASYCGIQHVTHNNAGKEVYGGSDLLVANGDFEALLALPHAPEVSTAVAQACTYHRAALACFPGLLASRCNYDVAQGTDDSGVWRSGVLEQSWRIGGATGAELAALTAFQADPGLRVVRASTTEIYGGAAPPPDAEVYFNGIDRHVGAITKYTRTMPYAHP

Samples

Sample ID Description Type Environment
1 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
2 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
3 2773857925 Microvirga vignae BR3299 Isolate Unclassified
4 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
5 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
6 2858688981 Cupriavidus sp. UYMMa02A Isolate Unclassified
7 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
8 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
9 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
10 3007419365 Pseudomonas vanderleydeniana RW8P3 Isolate Unclassified
11 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
26 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
27 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
28 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
29 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
30 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
31 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
35 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
51 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
52 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
59 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
74 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
75 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
76 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
111 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
112 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
113 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
114 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
115 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
116 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
117 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
120 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
121 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
126 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
127 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
132 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
133 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
134 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
135 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
136 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
137 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
138 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
139 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
151 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
152 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
166 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
173 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
174 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
175 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
176 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
177 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.2
Metatranscriptomes 0
Isolates 4.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.37
Nodule 1.31
Rhizoplane 6.11
Rhizosphere 78.6
Stem 0
Stem Tuber 0
Unclassified 9.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10004892 3300002067 Bacteria 4466
2 rootH1_10026835 3300003316 Bacteria 4954
3 rootH1_10046429 3300003316 Bacteria 4487
4 rootL2_10084599 3300003322 Bacteria 3198
5 Ga0070658_10020774 3300005327 Bacteria 5262
6 Ga0070676_10004844 3300005328 Bacteria 7122
7 Ga0070676_10034306 3300005328 Bacteria 2914
8 Ga0070670_100031238 3300005331 Bacteria 4586
9 Ga0070670_100036942 3300005331 Bacteria 4202
10 Ga0070670_100059806 3300005331 Bacteria 3271
11 Ga0070670_100076089 3300005331 Bacteria 2884
12 Ga0070677_10019145 3300005333 Bacteria 2475
13 Ga0068869_100041739 3300005334 Bacteria 3286
14 Ga0068868_100039348 3300005338 Bacteria 3675
15 Ga0070660_100014911 3300005339 Bacteria 5608
16 Ga0070660_100016788 3300005339 Bacteria 5324
17 Ga0070661_100013225 3300005344 Bacteria 5793
18 Ga0070661_100055072 3300005344 Bacteria 2913
19 Ga0070669_100042056 3300005353 Bacteria 3325
20 Ga0070688_100005816 3300005365 Bacteria 6527
21 Ga0070659_100000708 3300005366 Bacteria 24271
22 Ga0070659_100008936 3300005366 Bacteria 7343
23 Ga0070709_10230773 3300005434 Bacteria 1324
24 Ga0070713_100011326 3300005436 Bacteria 6491
25 Ga0070710_10142397 3300005437 Bacteria 1471
26 Ga0070701_10009198 3300005438 Bacteria 4319
27 Ga0070711_100065941 3300005439 Bacteria 2534
28 Ga0070708_100032508 3300005445 Bacteria 4527
29 Ga0070663_100033683 3300005455 Bacteria 3541
30 Ga0070662_100017097 3300005457 Bacteria 4882
31 Ga0070662_100136744 3300005457 Bacteria 1895
32 Ga0068867_100004016 3300005459 Bacteria 10351
33 Ga0068867_100007941 3300005459 Bacteria 7495
34 Ga0068867_100122825 3300005459 Bacteria 2009
35 Ga0070706_100002327 3300005467 Bacteria 19185
36 Ga0070698_100019090 3300005471 Bacteria 7207
37 Ga0070698_100075064 3300005471 Bacteria 3386
38 Ga0068853_100145816 3300005539 Bacteria 2127
39 Ga0070686_100010383 3300005544 Bacteria 5249
40 Ga0070696_100000754 3300005546 Bacteria 20726
41 Ga0070665_100201042 3300005548 Bacteria 1993
42 Ga0070664_100002781 3300005564 Bacteria 14117
43 Ga0070664_100047469 3300005564 Bacteria 3627
44 Ga0068857_100143815 3300005577 Bacteria 2157
45 Ga0068854_100006069 3300005578 Bacteria 7663
46 Ga0068854_100012739 3300005578 Bacteria 5506
47 Ga0070702_100023042 3300005615 Bacteria 3302
48 Ga0068852_100029824 3300005616 Bacteria 4483
49 Ga0068859_100104251 3300005617 Bacteria 2895
50 Ga0068859_100158792 3300005617 Bacteria 2340
51 Ga0068864_100008475 3300005618 Bacteria 8484
52 Ga0068851_10022941 3300005834 Bacteria 3046
53 Ga0068863_100057461 3300005841 Bacteria 3682
54 Ga0068860_100035724 3300005843 Bacteria 4765
55 Ga0075368_10023800 3300006042 Bacteria 2342
56 Ga0070712_100126238 3300006175 Bacteria 1933
57 Ga0075366_10024455 3300006195 Bacteria 3523
58 Ga0068871_100066712 3300006358 Bacteria 2950
59 Ga0075434_100056817 3300006871 Bacteria 3890
60 Ga0075429_100076354 3300006880 Unclassified 2918
61 Ga0068865_100034613 3300006881 Bacteria 3390
62 Ga0097620_100104254 3300006931 Bacteria 2895
63 Ga0097620_100158786 3300006931 Bacteria 2340
64 Ga0105251_10006512 3300009011 Bacteria 7416
65 Ga0105244_10000976 3300009036 Bacteria 24019
66 Ga0105240_10118320 3300009093 Bacteria 3193
67 Ga0111539_10013504 3300009094 Bacteria 10207
68 Ga0114129_10080916 3300009147 Bacteria 4515
69 Ga0105241_10169821 3300009174 Bacteria 1801
70 Ga0105242_10022210 3300009176 Bacteria 4987
71 Ga0105239_10093076 3300010375 Bacteria 3328
72 Ga0157373_10122154 3300013100 Bacteria 1830
73 Ga0157370_10022301 3300013104 Bacteria 6302
74 Ga0157370_10045465 3300013104 Bacteria 4212
75 Ga0157369_10024683 3300013105 Bacteria 6681
76 Ga0157369_10108487 3300013105 Bacteria 2953
77 Ga0157369_10323312 3300013105 Bacteria 1603
78 Ga0157374_10170516 3300013296 Bacteria 2123
79 Ga0157372_10080911 3300013307 Bacteria 3676
80 Ga0157375_10031064 3300013308 Bacteria 5042
81 Ga0157375_10146578 3300013308 Bacteria 2491
82 Ga0157380_10036407 3300014326 Bacteria 3807
83 Ga0182008_10004332 3300014497 Bacteria 8303
84 Ga0157377_10004035 3300014745 Bacteria 6700
85 Ga0157376_10046646 3300014969 Bacteria 3574
86 Ga0183369_1012 3300015685 Bacteria 251554
87 Ga0163161_10000117 3300017792 Bacteria 75699
88 Ga0207655_1000022 3300025728 Bacteria 483933
89 Ga0207713_1017329 3300025735 Bacteria 3620
90 Ga0207682_10001076 3300025893 Bacteria 12599
91 Ga0207688_10001687 3300025901 Bacteria 11700
92 Ga0207699_10192991 3300025906 Bacteria 1375
93 Ga0207645_10015567 3300025907 Bacteria 5050
94 Ga0207645_10016087 3300025907 Bacteria 4953
95 Ga0207705_10110158 3300025909 Bacteria 2034
96 Ga0207684_10121107 3300025910 Bacteria 2243
97 Ga0207693_10107689 3300025915 Bacteria 2186
98 Ga0207657_10001878 3300025919 Bacteria 22713
99 Ga0207657_10022350 3300025919 Bacteria 5920
100 Ga0207649_10011359 3300025920 Unclassified 4910
101 Ga0207649_10025626 3300025920 Bacteria 3440
102 Ga0207681_10043749 3300025923 Bacteria 2999
103 Ga0207650_10067992 3300025925 Bacteria 2675
104 Ga0207650_10090488 3300025925 Bacteria 2337
105 Ga0207644_10062443 3300025931 Bacteria 2702
106 Ga0207690_10001890 3300025932 Bacteria 12848
107 Ga0207706_10007705 3300025933 Bacteria 9942
108 Ga0207709_10137013 3300025935 Bacteria 1677
109 Ga0207704_10062689 3300025938 Bacteria 2313
110 Ga0207691_10310708 3300025940 Bacteria 1353
111 Ga0207689_10005281 3300025942 Bacteria 11577
112 Ga0207679_10004209 3300025945 Bacteria 8940
113 Ga0207679_10033127 3300025945 Bacteria 3634
114 Ga0207667_10089434 3300025949 Bacteria 3183
115 Ga0207651_10014563 3300025960 Bacteria 4546
116 Ga0207712_10062617 3300025961 Bacteria 2645
117 Ga0207640_10039622 3300025981 Bacteria 2983
118 Ga0207708_10007346 3300026075 Bacteria 8142
119 Ga0207641_10121602 3300026088 Bacteria 2330
120 Ga0207648_10000887 3300026089 Bacteria 33724
121 Ga0207648_10004283 3300026089 Bacteria 14715
122 Ga0207648_10009702 3300026089 Bacteria 9207
123 Ga0207674_10001413 3300026116 Bacteria 31010
124 Ga0207674_10011014 3300026116 Bacteria 10169
125 Ga0207675_100004486 3300026118 Bacteria 13488
126 Ga0207675_100219870 3300026118 Bacteria 1830
127 Ga0207683_10001274 3300026121 Bacteria 22824
128 Ga0207683_10246737 3300026121 Bacteria 1629
129 Ga0207428_10143203 3300027907 Bacteria 1823
130 Ga0307517_10000052 3300028786 Bacteria 155904
131 Ga0307515_10028415 3300028794 Bacteria 9507
132 Ga0314311_1055271 3300030733 Bacteria 2069
133 Ga0316182_1016585 3300030745 Bacteria 2017
134 Ga0307513_10105725 3300031456 Bacteria 2823
135 Ga0307508_10013988 3300031616 Bacteria 7322
136 Ga0307516_10107182 3300031730 Bacteria 2603
137 Ga0307409_100344997 3300031995 Bacteria 1403
138 Ga0307416_100093077 3300032002 Bacteria 2595
139 Ga0307416_100315127 3300032002 Unclassified 1563
140 Ga0307411_10153211 3300032005 Bacteria 1716
141 Ga0307510_10002287 3300033180 Bacteria 21621
142 Ga0395899_0015649 3300037312 Bacteria 5784
143 Ga0395900_0008181 3300037418 Bacteria 10762
144 Ga0395900_0072209 3300037418 Bacteria 3548
145 Ga0395900_0136139 3300037418 Bacteria 2516
146 Ga0395900_0428754 3300037418 Bacteria 1282
147 Ga0395898_0005081 3300037466 Bacteria 14264
148 Ga0395898_0006850 3300037466 Bacteria 12117
149 Ga0395898_0012928 3300037466 Bacteria 8611
150 Ga0395898_0027720 3300037466 Bacteria 5680
151 Ga0395898_0099400 3300037466 Bacteria 2794
152 Ga0395905_0002580 3300037471 Bacteria 19948
153 Ga0395905_0034782 3300037471 Bacteria 4731
154 Ga0395901_0008198 3300038443 Bacteria 10557
155 Ga0395901_0025389 3300038443 Bacteria 6082
156 Ga0395901_0054740 3300038443 Bacteria 4147
157 Ga0439436_0002271 3300041404 Bacteria 5758
158 Ga0439445_0025578 3300042004 Bacteria 1506
159 Ga0451577_0492965 3300042876 Bacteria 1112
160 Ga0453684_0014013 3300044712 Bacteria 12906
161 Ga0495580_0137119 3300046472 Bacteria 1697
162 Ga0495643_0045953 3300046522 Bacteria 2369
163 Ga0495598_0015321 3300046537 Bacteria 1934
164 Ga0495597_0025383 3300046542 Bacteria 2728
165 Ga0495668_0043422 3300046616 Bacteria 2501
166 Ga0495625_0098335 3300046660 Bacteria 2013
167 Ga0495661_0002715 3300046665 Bacteria 13492
168 Ga0495636_0020716 3300047318 Bacteria 2651
169 Ga0495683_0015385 3300047323 Bacteria 3982
170 Ga0495687_000005 3300047443 Bacteria 610401
171 Ga0495687_006044 3300047443 Bacteria 7540
172 Ga0495687_007738 3300047443 Bacteria 6264
173 Ga0496100_0031715 3300048903 Bacteria 3288
174 Ga0496102_0010268 3300048905 Bacteria 8051
175 Ga0496102_0018268 3300048905 Bacteria 6160
176 Ga0496103_0051329 3300048906 Bacteria 2552
177 Ga0496104_0054098 3300048907 Bacteria 3794
178 Ga0496104_0206480 3300048907 Bacteria 1876
179 Ga0496105_0269973 3300048908 Bacteria 1374
180 Ga0496107_0074516 3300048910 Bacteria 2470
181 Ga0496109_0148579 3300048912 Bacteria 2193
182 Ga0496110_0023857 3300048913 Bacteria 5207
183 Ga0496110_0067121 3300048913 Bacteria 3173
184 Ga0496110_0293004 3300048913 Bacteria 1482
185 Ga0496112_0013074 3300048915 Bacteria 7658
186 Ga0496114_0071105 3300048917 Bacteria 2923
187 Ga0496116_0004115 3300048919 Bacteria 14016
188 Ga0496118_0103247 3300048921 Bacteria 1918
189 Ga0496121_0140800 3300048924 Bacteria 1790
190 Ga0496122_0015097 3300048925 Bacteria 7409
191 Ga0496124_0000004 3300048927 Bacteria 976131
192 Ga0496125_0010071 3300048928 Bacteria 9592
193 Ga0501031_0032571 3300049568 Bacteria 3398
194 Ga0501032_0123219 3300049569 Bacteria 1713
195 Ga0501033_0175175 3300049570 Bacteria 1539
196 Ga0501034_0257635 3300049571 Bacteria 1688
197 Ga0501037_0042882 3300049573 Bacteria 3325
198 Ga0501040_0114885 3300049576 Bacteria 1885
199 Ga0501041_0069503 3300049577 Bacteria 2160
200 Ga0501043_0019927 3300049579 Bacteria 5266
201 Ga0501047_0004739 3300049581 Bacteria 12789
202 Ga0501047_0020953 3300049581 Bacteria 6279
203 Ga0501225_0004148 3300049705 Bacteria 4333
204 Ga0501081_0044280 3300049743 Bacteria 3055
205 Ga0501035_0056610 3300049822 Bacteria 3497
206 Ga0501035_0073168 3300049822 Bacteria 3032
207 Ga0501035_0276684 3300049822 Bacteria 1420
208 nmdc:mga0k408_19748_c1 3300050493 Bacteria 3769
209 nmdc:mga0k408_63480_c1 3300050493 Bacteria 2149
210 nmdc:mga08y16_128693_c1 3300050511 Bacteria 2634
211 nmdc:mga0n895_177450_c1 3300050512 Bacteria 2161
212 nmdc:mga0rr50_218731_c1 3300050513 Bacteria 1572
213 Ga0500644_0002891 3300053088 Bacteria 4263
214 Ga0500644_0005602 3300053088 Bacteria 3176
215 Ga0500594_0002061 3300053118 Bacteria 4344
216 Ga0500652_001380 3300053131 Bacteria 7591
217 Ga0500559_0000065 3300053136 Bacteria 85032
218 Ga0500622_0005819 3300053156 Bacteria 7308

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300042876 Ga0451577_0492965 Ga0451577_0492965_32_1084 345
2 3300037418 Ga0395900_0008181 Ga0395900_0008181_7865_8956 347
3 3300037466 Ga0395898_0012928 Ga0395898_0012928_5494_6585 347
4 3300038443 Ga0395901_0025389 Ga0395901_0025389_4046_5137 347
5 3300009036 Ga0105244_10000976 Ga0105244_100009767 349
6 3300049822 Ga0501035_0276684 Ga0501035_0276684_115_1215 350
7 3300025728 Ga0207655_1000022 Ga0207655_100002253 351
8 iso_pu_bacteria 3007419365 3007423573 351
9 3300005353 Ga0070669_100042056 Ga0070669_1000420563 353
10 3300025981 Ga0207640_10039622 Ga0207640_100396222 354
11 3300041404 Ga0439436_0002271 Ga0439436_0002271_1437_2609 354
12 iso_pu_bacteria 644736347 644752116 355
13 3300006175 Ga0070712_100126238 Ga0070712_1001262382 357
14 3300013105 Ga0157369_10024683 Ga0157369_100246834 357
15 3300025915 Ga0207693_10107689 Ga0207693_101076893 357
16 3300046472 Ga0495580_0137119 Ga0495580_0137119_454_1614 357
17 3300030733 Ga0314311_1055271 Ga0314311_10552712 358
18 3300030745 Ga0316182_1016585 Ga0316182_10165852 358
19 3300042004 Ga0439445_0025578 Ga0439445_0025578_261_1370 358
20 3300049576 Ga0501040_0114885 Ga0501040_0114885_26_1108 358
21 3300049705 Ga0501225_0004148 Ga0501225_0004148_1085_2188 358
22 3300047318 Ga0495636_0020716 Ga0495636_0020716_999_2117 359
23 3300053088 Ga0500644_0002891 Ga0500644_0002891_2085_3212 359
24 3300005471 Ga0070698_100019090 Ga0070698_1000190903 360
25 3300037312 Ga0395899_0015649 Ga0395899_0015649_1311_2402 360
26 3300037418 Ga0395900_0072209 Ga0395900_0072209_1000_2091 360
27 3300037466 Ga0395898_0005081 Ga0395898_0005081_2477_3568 360
28 3300037466 Ga0395898_0006850 Ga0395898_0006850_4671_5762 360
29 3300037466 Ga0395898_0027720 Ga0395898_0027720_1460_2551 360
30 3300037471 Ga0395905_0034782 Ga0395905_0034782_65_1156 360
31 3300038443 Ga0395901_0008198 Ga0395901_0008198_6083_7174 360
32 3300038443 Ga0395901_0054740 Ga0395901_0054740_961_2052 360
33 3300048924 Ga0496121_0140800 Ga0496121_0140800_16_1107 360
34 3300049568 Ga0501031_0032571 Ga0501031_0032571_2175_3305 360
35 3300049569 Ga0501032_0123219 Ga0501032_0123219_264_1355 360
36 3300049570 Ga0501033_0175175 Ga0501033_0175175_437_1528 360
37 3300049573 Ga0501037_0042882 Ga0501037_0042882_1389_2480 360
38 3300049577 Ga0501041_0069503 Ga0501041_0069503_648_1778 360
39 3300049579 Ga0501043_0019927 Ga0501043_0019927_3436_4527 360
40 3300049581 Ga0501047_0020953 Ga0501047_0020953_4624_5715 360
41 3300049743 Ga0501081_0044280 Ga0501081_0044280_825_1955 360
42 3300049822 Ga0501035_0056610 Ga0501035_0056610_605_1696 360
43 3300003322 rootL2_10084599 rootL2_100845992 361
44 3300017792 Ga0163161_10000117 Ga0163161_1000011716 362
45 3300048927 Ga0496124_0000004 Ga0496124_0000004_868508_869632 362
46 iso_pu_bacteria 2773857925 2774873299 362
47 iso_pu_bacteria 2857542790 2857547380 362
48 3300005577 Ga0068857_100143815 Ga0068857_1001438151 363
49 3300003316 rootH1_10046429 rootH1_100464291 364
50 3300009147 Ga0114129_10080916 Ga0114129_100809162 364
51 3300053088 Ga0500644_0005602 Ga0500644_0005602_1917_3065 365
52 3300053118 Ga0500594_0002061 Ga0500594_0002061_1737_2885 365
53 3300053136 Ga0500559_0000065 Ga0500559_0000065_28534_29682 365
54 3300053156 Ga0500622_0005819 Ga0500622_0005819_4608_5756 365
55 iso_pu_bacteria 2858688981 2858695833 365
56 3300005459 Ga0068867_100122825 Ga0068867_1001228252 366
57 3300005617 Ga0068859_100158792 Ga0068859_1001587922 366
58 3300006880 Ga0075429_100076354 Ga0075429_1000763542 366
59 3300006931 Ga0097620_100158786 Ga0097620_1001587862 366
60 3300025935 Ga0207709_10137013 Ga0207709_101370132 366
61 3300026089 Ga0207648_10009702 Ga0207648_1000970212 366
62 3300026118 Ga0207675_100219870 Ga0207675_1002198702 366
63 3300026121 Ga0207683_10246737 Ga0207683_102467372 366
64 3300005434 Ga0070709_10230773 Ga0070709_102307731 367
65 3300006871 Ga0075434_100056817 Ga0075434_1000568172 367
66 3300009174 Ga0105241_10169821 Ga0105241_101698212 367
67 3300025906 Ga0207699_10192991 Ga0207699_101929912 367
68 3300025931 Ga0207644_10062443 Ga0207644_100624432 367
69 3300025949 Ga0207667_10089434 Ga0207667_100894341 367
70 3300037418 Ga0395900_0428754 Ga0395900_0428754_58_1209 367
71 3300037466 Ga0395898_0099400 Ga0395898_0099400_308_1459 367
72 3300050512 nmdc:mga0n895_177450_c1 nmdc:mga0n895_177450_c1_214_1368 367
73 3300005331 Ga0070670_100059806 Ga0070670_1000598063 368
74 3300013104 Ga0157370_10022301 Ga0157370_100223014 368
75 3300014497 Ga0182008_10004332 Ga0182008_100043322 368
76 3300025923 Ga0207681_10043749 Ga0207681_100437493 368
77 3300025925 Ga0207650_10090488 Ga0207650_100904881 368
78 3300025940 Ga0207691_10310708 Ga0207691_103107082 368
79 3300028786 Ga0307517_10000052 Ga0307517_1000005295 368
80 3300028794 Ga0307515_10028415 Ga0307515_100284156 368
81 3300031456 Ga0307513_10105725 Ga0307513_101057252 368
82 3300031616 Ga0307508_10013988 Ga0307508_100139887 368
83 3300031730 Ga0307516_10107182 Ga0307516_101071825 368
84 3300031995 Ga0307409_100344997 Ga0307409_1003449972 368
85 3300032002 Ga0307416_100093077 Ga0307416_1000930774 368
86 3300032002 Ga0307416_100315127 Ga0307416_1003151271 368
87 3300032005 Ga0307411_10153211 Ga0307411_101532112 368
88 3300044712 Ga0453684_0014013 Ga0453684_0014013_9584_10759 368
89 3300046660 Ga0495625_0098335 Ga0495625_0098335_131_1261 368
90 3300050493 nmdc:mga0k408_19748_c1 nmdc:mga0k408_19748_c1_2103_3251 368
91 iso_pu_bacteria 2919704043 2919707657 368
92 3300005328 Ga0070676_10004844 Ga0070676_100048444 369
93 3300005328 Ga0070676_10034306 Ga0070676_100343062 369
94 3300005331 Ga0070670_100031238 Ga0070670_1000312384 369
95 3300005333 Ga0070677_10019145 Ga0070677_100191452 369
96 3300005334 Ga0068869_100041739 Ga0068869_1000417392 369
97 3300005338 Ga0068868_100039348 Ga0068868_1000393483 369
98 3300005339 Ga0070660_100014911 Ga0070660_1000149114 369
99 3300005344 Ga0070661_100013225 Ga0070661_1000132255 369
100 3300005365 Ga0070688_100005816 Ga0070688_1000058166 369
101 3300005366 Ga0070659_100008936 Ga0070659_1000089365 369
102 3300005436 Ga0070713_100011326 Ga0070713_1000113266 369
103 3300005437 Ga0070710_10142397 Ga0070710_101423971 369
104 3300005438 Ga0070701_10009198 Ga0070701_100091984 369
105 3300005439 Ga0070711_100065941 Ga0070711_1000659413 369
106 3300005457 Ga0070662_100017097 Ga0070662_1000170973 369
107 3300005459 Ga0068867_100004016 Ga0068867_10000401610 369
108 3300005459 Ga0068867_100007941 Ga0068867_1000079418 369
109 3300005539 Ga0068853_100145816 Ga0068853_1001458161 369
110 3300005544 Ga0070686_100010383 Ga0070686_1000103832 369
111 3300005546 Ga0070696_100000754 Ga0070696_10000075411 369
112 3300005578 Ga0068854_100006069 Ga0068854_1000060695 369
113 3300005615 Ga0070702_100023042 Ga0070702_1000230421 369
114 3300005618 Ga0068864_100008475 Ga0068864_1000084757 369
115 3300005841 Ga0068863_100057461 Ga0068863_1000574612 369
116 3300005843 Ga0068860_100035724 Ga0068860_1000357245 369
117 3300006195 Ga0075366_10024455 Ga0075366_100244553 369
118 3300006358 Ga0068871_100066712 Ga0068871_1000667122 369
119 3300006881 Ga0068865_100034613 Ga0068865_1000346134 369
120 3300009093 Ga0105240_10118320 Ga0105240_101183203 369
121 3300009094 Ga0111539_10013504 Ga0111539_100135046 369
122 3300009176 Ga0105242_10022210 Ga0105242_100222105 369
123 3300010375 Ga0105239_10093076 Ga0105239_100930763 369
124 3300013100 Ga0157373_10122154 Ga0157373_101221542 369
125 3300013104 Ga0157370_10045465 Ga0157370_100454653 369
126 3300013307 Ga0157372_10080911 Ga0157372_100809113 369
127 3300013308 Ga0157375_10031064 Ga0157375_100310646 369
128 3300013308 Ga0157375_10146578 Ga0157375_101465781 369
129 3300014326 Ga0157380_10036407 Ga0157380_100364072 369
130 3300014745 Ga0157377_10004035 Ga0157377_100040353 369
131 3300014969 Ga0157376_10046646 Ga0157376_100466463 369
132 3300015685 Ga0183369_1012 Ga0183369_101214 369
133 3300025893 Ga0207682_10001076 Ga0207682_100010768 369
134 3300025901 Ga0207688_10001687 Ga0207688_100016876 369
135 3300025907 Ga0207645_10015567 Ga0207645_100155673 369
136 3300025907 Ga0207645_10016087 Ga0207645_100160872 369
137 3300025919 Ga0207657_10022350 Ga0207657_100223504 369
138 3300025933 Ga0207706_10007705 Ga0207706_100077055 369
139 3300025938 Ga0207704_10062689 Ga0207704_100626892 369
140 3300025942 Ga0207689_10005281 Ga0207689_100052818 369
141 3300025960 Ga0207651_10014563 Ga0207651_100145632 369
142 3300025961 Ga0207712_10062617 Ga0207712_100626172 369
143 3300026075 Ga0207708_10007346 Ga0207708_100073468 369
144 3300026088 Ga0207641_10121602 Ga0207641_101216023 369
145 3300026089 Ga0207648_10000887 Ga0207648_100008877 369
146 3300026089 Ga0207648_10004283 Ga0207648_100042835 369
147 3300026116 Ga0207674_10001413 Ga0207674_1000141322 369
148 3300026116 Ga0207674_10011014 Ga0207674_100110143 369
149 3300026118 Ga0207675_100004486 Ga0207675_1000044866 369
150 3300026121 Ga0207683_10001274 Ga0207683_1000127419 369
151 3300027907 Ga0207428_10143203 Ga0207428_101432032 369
152 3300033180 Ga0307510_10002287 Ga0307510_1000228719 369
153 3300046537 Ga0495598_0015321 Ga0495598_0015321_330_1487 369
154 3300047443 Ga0495687_007738 Ga0495687_007738_2165_3502 369
155 3300048905 Ga0496102_0018268 Ga0496102_0018268_3046_4206 369
156 3300048910 Ga0496107_0074516 Ga0496107_0074516_1195_2355 369
157 3300048912 Ga0496109_0148579 Ga0496109_0148579_739_1899 369
158 3300048913 Ga0496110_0023857 Ga0496110_0023857_1032_2192 369
159 3300048913 Ga0496110_0293004 Ga0496110_0293004_141_1298 369
160 3300048917 Ga0496114_0071105 Ga0496114_0071105_1152_2300 369
161 3300048919 Ga0496116_0004115 Ga0496116_0004115_3537_4679 369
162 3300049822 Ga0501035_0073168 Ga0501035_0073168_1148_2431 369
163 3300050493 nmdc:mga0k408_63480_c1 nmdc:mga0k408_63480_c1_322_1488 369
164 3300050511 nmdc:mga08y16_128693_c1 nmdc:mga08y16_128693_c1_143_1291 369
165 3300050513 nmdc:mga0rr50_218731_c1 nmdc:mga0rr50_218731_c1_63_1211 369
166 3300053131 Ga0500652_001380 Ga0500652_001380_4785_5957 369
167 iso_pu_bacteria 2513237150 2513954775 369
168 iso_pu_bacteria 2513237165 2514043731 369
169 3300003316 rootH1_10026835 rootH1_100268354 370
170 3300005327 Ga0070658_10020774 Ga0070658_100207745 370
171 3300005331 Ga0070670_100036942 Ga0070670_1000369425 370
172 3300005331 Ga0070670_100076089 Ga0070670_1000760892 370
173 3300005344 Ga0070661_100055072 Ga0070661_1000550721 370
174 3300005455 Ga0070663_100033683 Ga0070663_1000336832 370
175 3300005548 Ga0070665_100201042 Ga0070665_1002010421 370
176 3300005564 Ga0070664_100002781 Ga0070664_10000278114 370
177 3300005578 Ga0068854_100012739 Ga0068854_1000127396 370
178 3300005616 Ga0068852_100029824 Ga0068852_1000298244 370
179 3300005834 Ga0068851_10022941 Ga0068851_100229413 370
180 3300013105 Ga0157369_10108487 Ga0157369_101084872 370
181 3300013296 Ga0157374_10170516 Ga0157374_101705161 370
182 3300025909 Ga0207705_10110158 Ga0207705_101101582 370
183 3300025920 Ga0207649_10025626 Ga0207649_100256263 370
184 3300025925 Ga0207650_10067992 Ga0207650_100679922 370
185 3300025945 Ga0207679_10033127 Ga0207679_100331274 370
186 3300037418 Ga0395900_0136139 Ga0395900_0136139_741_1976 370
187 3300046522 Ga0495643_0045953 Ga0495643_0045953_1164_2327 370
188 3300046616 Ga0495668_0043422 Ga0495668_0043422_1224_2480 370
189 3300046665 Ga0495661_0002715 Ga0495661_0002715_5398_6561 370
190 3300047443 Ga0495687_006044 Ga0495687_006044_104_1267 370
191 3300049571 Ga0501034_0257635 Ga0501034_0257635_21_1268 370
192 3300049581 Ga0501047_0004739 Ga0501047_0004739_9855_11102 370
193 iso_pu_bacteria 2848858292 2848861282 370
194 iso_pu_bacteria 2945909444 2945912093 370
195 iso_pu_bacteria 2945984333 2945985622 370
196 3300005339 Ga0070660_100016788 Ga0070660_1000167884 371
197 3300005366 Ga0070659_100000708 Ga0070659_10000070819 371
198 3300005457 Ga0070662_100136744 Ga0070662_1001367442 371
199 3300005564 Ga0070664_100047469 Ga0070664_1000474694 371
200 3300005617 Ga0068859_100104251 Ga0068859_1001042514 371
201 3300006931 Ga0097620_100104254 Ga0097620_1001042544 371
202 3300025919 Ga0207657_10001878 Ga0207657_100018784 371
203 3300025920 Ga0207649_10011359 Ga0207649_100113591 371
204 3300025932 Ga0207690_10001890 Ga0207690_100018909 371
205 3300025945 Ga0207679_10004209 Ga0207679_100042095 371
206 3300037471 Ga0395905_0002580 Ga0395905_0002580_5939_7105 371
207 3300048907 Ga0496104_0054098 Ga0496104_0054098_2092_3264 371
208 3300005445 Ga0070708_100032508 Ga0070708_1000325084 373
209 3300005467 Ga0070706_100002327 Ga0070706_10000232714 373
210 3300005471 Ga0070698_100075064 Ga0070698_1000750642 373
211 3300006042 Ga0075368_10023800 Ga0075368_100238002 373
212 3300025910 Ga0207684_10121107 Ga0207684_101211072 373
213 3300047443 Ga0495687_000005 Ga0495687_000005_465863_467002 374
214 3300002067 JGI24735J21928_10004892 JGI24735J21928_100048925 376
215 3300009011 Ga0105251_10006512 Ga0105251_100065122 376
216 3300013105 Ga0157369_10323312 Ga0157369_103233121 376
217 3300025735 Ga0207713_1017329 Ga0207713_10173292 376
218 3300046542 Ga0495597_0025383 Ga0495597_0025383_422_1576 376
219 3300047323 Ga0495683_0015385 Ga0495683_0015385_2236_3390 376
220 3300048903 Ga0496100_0031715 Ga0496100_0031715_1049_2203 376
221 3300048905 Ga0496102_0010268 Ga0496102_0010268_6271_7425 376
222 3300048906 Ga0496103_0051329 Ga0496103_0051329_334_1488 376
223 3300048907 Ga0496104_0206480 Ga0496104_0206480_287_1441 376
224 3300048908 Ga0496105_0269973 Ga0496105_0269973_145_1299 376
225 3300048913 Ga0496110_0067121 Ga0496110_0067121_199_1353 376
226 3300048915 Ga0496112_0013074 Ga0496112_0013074_493_1647 376
227 3300048921 Ga0496118_0103247 Ga0496118_0103247_634_1788 376
228 3300048925 Ga0496122_0015097 Ga0496122_0015097_5914_7068 376
229 3300048928 Ga0496125_0010071 Ga0496125_0010071_655_1809 376

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11379

DUF3182

Protein of unknown function (DUF3182)

84

437

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1auv-assembly1.cif.gz_B-2 structure of the c domain of synapsin ia from bovine brain 0.6204 151 305
3q1k-assembly2.cif.gz_D the crystal structure of the d-alanyl-alanine synthetase a from salmonella enterica typhimurium complexed with adp 0.6069 120 305
1pk8-assembly2.cif.gz_F crystal structure of rat synapsin i c domain complexed to ca.atp 0.6051 150 305
1px2-assembly1.cif.gz_B-2 crystal structure of rat synapsin i c domain complexed to ca.atp (form 1) 0.5992 120 323
1i7l-assembly1.cif.gz_A crystal structure analysis of the complex of the c domain of synapsin ii from rat with atp 0.5764 119 322
ID Description Score Start End Superfamily
5i47A02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8453 129 196 3.30.1490.20
1c3oA03 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8238 126 196 3.30.1490.20
5i47A02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8095 129 196 3.30.1490.20
af_P15567_114_180_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8092 126 194 3.30.1490.20
3vpcB02 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8047 129 196 3.30.1490.20
ID Description Score Start End GO Terms
AF-A0A6P2IM20-F1-model_v4 DUF3182 family protein 0.981 63 371
AF-A0A536TUU8-F1-model_v4 DUF3182 family protein 0.9761 26 373
AF-A0A341EL00-F1-model_v4 DUF3182 domain-containing protein 0.9704 193 369
AF-A0A0C2BV73-F1-model_v4 Biotin carboxylase 0.9695 12 373
AF-A0A8A8F649-F1-model_v4 deleted 0.9692 6 371

Feature Viewer

pLDDT pTM Quality
90.77 0.9 High
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Predicted Structure (AlphaFold2)

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