F342084

General Info

Members Datasets Scaffolds Average Seq Length
229 196 223 140

Family's Representative Sequence

Representative Sequence 3300025913|Ga0207695_10202215|Ga0207695_102022151
Length 163
Sequence MYVLDTNVVSELRKVQAGRAHPGVAKWADTVAPMDLYLSAITVEELEIGILLAERRDPPQGAIYRAWMSTRLLATFADRILPIDTAVAQRSARLHVPDPRPVRDALIAATALVHGMAVVTRNVADFTLTGVTIINPWTHAAHGRAKETANDSTGRSSPLRSAG

Samples

Sample ID Description Type Environment
1 2582580891 Pseudomonas chlororaphis YL-1 Isolate Unclassified
2 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
3 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
4 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
5 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
6 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
7 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
8 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
13 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
22 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
23 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
35 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
36 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
37 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
77 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
78 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
79 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
81 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
116 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
119 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
120 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
121 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
122 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
123 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
124 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
125 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
126 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
127 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
128 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
129 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
130 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
131 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
132 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
133 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
134 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
135 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
136 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
137 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
138 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
139 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
140 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
141 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
142 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
143 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
144 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
145 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
146 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
147 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
148 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
149 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
150 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
151 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
152 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
153 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
154 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
155 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
156 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
157 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
158 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
159 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
160 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
161 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
162 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
163 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
168 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
169 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
170 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
180 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
181 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
182 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
183 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
184 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
185 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
186 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
187 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
188 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
189 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
190 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
191 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
192 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
193 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
196 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.38
Metatranscriptomes 0
Isolates 2.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.86
Nodule 1.31
Rhizoplane 2.18
Rhizosphere 78.6
Stem 0
Stem Tuber 0
Unclassified 10.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1023912 3300002705 Bacteria 1008
2 JGI25157J39369_1014297 3300002741 Bacteria 988
3 JGI25406J46586_10009321 3300003203 Bacteria 4397
4 JGI25153J46596_10003233 3300003215 Bacteria 9162
5 rootH2_10000481 3300003320 Bacteria 2098
6 rootH1_10200992 3300003323 Bacteria 1488
7 rootH1_10320980 3300003323 Bacteria 2130
8 Ga0055525_1000046 3300003759 Bacteria 261587
9 Ga0055524_1030603 3300003775 Bacteria 1565
10 Ga0065165_1014225 3300005262 Bacteria 3101
11 Ga0070683_100019759 3300005329 Bacteria 5987
12 Ga0070683_100158058 3300005329 Bacteria 2150
13 Ga0070670_100064834 3300005331 Bacteria 3134
14 Ga0070670_100667783 3300005331 Bacteria 933
15 Ga0070677_10119778 3300005333 Bacteria 1187
16 Ga0068869_100007708 3300005334 Bacteria 6899
17 Ga0068868_100009229 3300005338 Bacteria 7090
18 Ga0070660_100472833 3300005339 Bacteria 1041
19 Ga0070687_100077277 3300005343 Bacteria 1806
20 Ga0070692_10001893 3300005345 Bacteria 7891
21 Ga0070668_100733747 3300005347 Bacteria 873
22 Ga0070675_100001447 3300005354 Bacteria 17463
23 Ga0070675_100500752 3300005354 Bacteria 1095
24 Ga0070671_101043559 3300005355 Bacteria 717
25 Ga0070674_100362024 3300005356 Bacteria 1175
26 Ga0070659_100206959 3300005366 Bacteria 1616
27 Ga0070700_100009131 3300005441 Bacteria 5435
28 Ga0070663_100005113 3300005455 Bacteria 7764
29 Ga0070678_100371601 3300005456 Bacteria 1235
30 Ga0070678_100404891 3300005456 Bacteria 1186
31 Ga0070662_100012741 3300005457 Bacteria 5582
32 Ga0070681_10268926 3300005458 Bacteria 1616
33 Ga0068867_102138028 3300005459 Bacteria 530
34 Ga0070706_100879548 3300005467 Bacteria 828
35 Ga0070707_100148489 3300005468 Bacteria 2282
36 Ga0070698_100389219 3300005471 Bacteria 1327
37 Ga0070684_100019786 3300005535 Bacteria 5575
38 Ga0070684_100086832 3300005535 Bacteria 2777
39 Ga0068853_101172733 3300005539 Bacteria 741
40 Ga0070672_100279825 3300005543 Bacteria 1410
41 Ga0070695_100813303 3300005545 Bacteria 749
42 Ga0070665_100011667 3300005548 Bacteria 8880
43 Ga0070704_100469842 3300005549 Bacteria 1086
44 Ga0068855_100000813 3300005563 Bacteria 38637
45 Ga0070664_100001401 3300005564 Bacteria 19239
46 Ga0068857_100015768 3300005577 Bacteria 6612
47 Ga0068857_100550091 3300005577 Bacteria 1087
48 Ga0068852_100000078 3300005616 Bacteria 68720
49 Ga0068861_100077565 3300005719 Bacteria 2592
50 Ga0068863_100263049 3300005841 Bacteria 1668
51 Ga0068858_100157427 3300005842 Bacteria 2138
52 Ga0068860_100047534 3300005843 Bacteria 4089
53 Ga0068862_100021451 3300005844 Bacteria 5397
54 Ga0068862_100371632 3300005844 Bacteria 1331
55 Ga0081539_10000785 3300005985 Bacteria 61844
56 Ga0070717_10334581 3300006028 Bacteria 1351
57 Ga0097621_100807879 3300006237 Bacteria 869
58 Ga0075431_100801204 3300006847 Unclassified 915
59 Ga0075435_100737926 3300007076 Bacteria 856
60 Ga0105240_10000065 3300009093 Bacteria 213992
61 Ga0105240_10261413 3300009093 Bacteria 1997
62 Ga0111539_10002350 3300009094 Bacteria 25187
63 Ga0105245_10049258 3300009098 Bacteria 3772
64 Ga0105241_10613401 3300009174 Bacteria 984
65 Ga0105248_10904168 3300009177 Unclassified 997
66 Ga0105237_10385024 3300009545 Bacteria 1407
67 Ga0105249_10831627 3300009553 Bacteria 988
68 Ga0105239_10736275 3300010375 Bacteria 1128
69 Ga0105246_10097683 3300011119 Bacteria 2132
70 Ga0157370_10000009 3300013104 Bacteria 231270
71 Ga0157369_10000022 3300013105 Bacteria 233081
72 Ga0157374_11724664 3300013296 Unclassified 651
73 Ga0157378_10849752 3300013297 Bacteria 941
74 Ga0157372_10000192 3300013307 Bacteria 67358
75 Ga0157372_10064718 3300013307 Bacteria 4103
76 Ga0157375_10421935 3300013308 Bacteria 1500
77 Ga0157377_10013371 3300014745 Bacteria 4153
78 Ga0157379_10466773 3300014968 Unclassified 1167
79 Ga0209672_100470 3300025228 Bacteria 22677
80 Ga0209563_100005 3300025230 Bacteria 1774893
81 Ga0209646_1018311 3300025246 Bacteria 1027
82 Ga0209026_1020246 3300025250 Bacteria 1035
83 Ga0209759_1031360 3300025256 Bacteria 1036
84 Ga0209256_1009705 3300025299 Bacteria 4165
85 Ga0207426_1014745 3300025302 Bacteria 2857
86 Ga0207682_10137545 3300025893 Bacteria 1094
87 Ga0207688_10027844 3300025901 Bacteria 3109
88 Ga0207684_10929642 3300025910 Bacteria 730
89 Ga0207707_10344806 3300025912 Bacteria 1284
90 Ga0207695_10000052 3300025913 Bacteria 398089
91 Ga0207695_10202215 3300025913 Bacteria 1900
92 Ga0207671_10127300 3300025914 Bacteria 1952
93 Ga0207662_10078903 3300025918 Bacteria 2005
94 Ga0207646_10123018 3300025922 Bacteria 2332
95 Ga0207681_10414075 3300025923 Bacteria 1091
96 Ga0207659_10010779 3300025926 Bacteria 5752
97 Ga0207659_10088841 3300025926 Bacteria 2303
98 Ga0207687_10151687 3300025927 Bacteria 1769
99 Ga0207644_10873408 3300025931 Bacteria 753
100 Ga0207690_10178944 3300025932 Bacteria 1595
101 Ga0207706_10406208 3300025933 Bacteria 1180
102 Ga0207670_10773631 3300025936 Bacteria 798
103 Ga0207670_10894245 3300025936 Bacteria 743
104 Ga0207669_10424266 3300025937 Bacteria 1048
105 Ga0207704_10164020 3300025938 Bacteria 1585
106 Ga0207691_10200569 3300025940 Unclassified 1737
107 Ga0207689_10144275 3300025942 Bacteria 1962
108 Ga0207661_10015472 3300025944 Bacteria 5614
109 Ga0207661_10739182 3300025944 Bacteria 905
110 Ga0207679_10241904 3300025945 Bacteria 1529
111 Ga0207667_10000442 3300025949 Bacteria 55598
112 Ga0207668_10550385 3300025972 Bacteria 999
113 Ga0207677_10063352 3300026023 Bacteria 2570
114 Ga0207703_10047641 3300026035 Bacteria 3457
115 Ga0207639_11296720 3300026041 Bacteria 683
116 Ga0207678_10145752 3300026067 Bacteria 2021
117 Ga0207678_10209167 3300026067 Bacteria 1669
118 Ga0207708_10011855 3300026075 Bacteria 6491
119 Ga0207641_10388566 3300026088 Unclassified 1338
120 Ga0207648_11706809 3300026089 Bacteria 591
121 Ga0207674_10008864 3300026116 Bacteria 11573
122 Ga0207683_10263830 3300026121 Bacteria 1573
123 Ga0207683_10454067 3300026121 Bacteria 1182
124 Ga0207698_10000007 3300026142 Bacteria 289457
125 Ga0209974_10125926 3300027876 Bacteria 911
126 Ga0207428_10048564 3300027907 Bacteria 3404
127 Ga0268266_10004754 3300028379 Bacteria 12912
128 Ga0268265_10117511 3300028380 Bacteria 2184
129 Ga0268265_10543230 3300028380 Bacteria 1102
130 Ga0265337_1022885 3300028556 Bacteria 1930
131 Ga0265336_10124857 3300028666 Unclassified 766
132 Ga0307515_10079658 3300028794 Bacteria 4286
133 Ga0307515_10122840 3300028794 Bacteria 2925
134 Ga0307515_10183886 3300028794 Bacteria 2028
135 Ga0307515_10893857 3300028794 Bacteria 518
136 Ga0265338_10000188 3300028800 Bacteria 116010
137 Ga0265324_10000366 3300029957 Bacteria 32818
138 Ga0265324_10036985 3300029957 Bacteria 1697
139 Ga0265328_10000081 3300031239 Bacteria 48915
140 Ga0265328_10012790 3300031239 Bacteria 3336
141 Ga0265328_10048196 3300031239 Bacteria 1565
142 Ga0265328_10086717 3300031239 Bacteria 1155
143 Ga0265339_10028941 3300031249 Bacteria 3147
144 Ga0307508_10362631 3300031616 Bacteria 1040
145 Ga0307514_10008735 3300031649 Bacteria 8589
146 Ga0265314_10008166 3300031711 Bacteria 9004
147 Ga0316578_10113119 3300031728 Bacteria 1631
148 Ga0307516_10271224 3300031730 Unclassified 1383
149 Ga0307406_10126331 3300031901 Bacteria 1788
150 Ga0307409_100088252 3300031995 Bacteria 2531
151 Ga0307416_100832914 3300032002 Bacteria 1020
152 Ga0307415_100519075 3300032126 Bacteria 1045
153 Ga0307510_10211678 3300033180 Bacteria 1460
154 Ga0395900_0000159 3300037418 Bacteria 111486
155 Ga0395898_0000425 3300037466 Bacteria 89768
156 Ga0400487_04300 3300039110 Bacteria 1176
157 Ga0436361_1001917 3300039447 Bacteria 720
158 Ga0436361_1015587 3300039447 Bacteria 6707
159 Ga0439436_0128697 3300041404 Bacteria 709
160 Ga0439453_0010342 3300041408 Bacteria 1536
161 Ga0439443_088140 3300042003 Unclassified 583
162 Ga0450919_005745 3300042121 Bacteria 1483
163 Ga0450918_001113 3300042531 Bacteria 5519
164 Ga0466972_0028505 3300044658 Bacteria 2753
165 Ga0466965_0656594 3300044683 Bacteria 599
166 Ga0466966_0296866 3300044684 Bacteria 971
167 Ga0453684_0000102 3300044712 Bacteria 366870
168 Ga0453684_0001955 3300044712 Bacteria 53116
169 Ga0451576_0000042 3300045051 Bacteria 342102
170 Ga0451576_1294958 3300045051 Unclassified 760
171 Ga0466958_0000721 3300045836 Bacteria 14430
172 Ga0495638_0181948 3300046460 Bacteria 1199
173 Ga0495580_0002677 3300046472 Bacteria 15450
174 Ga0495594_0361721 3300046499 Bacteria 826
175 Ga0495583_0007097 3300046506 Bacteria 7157
176 Ga0495648_0038501 3300046524 Bacteria 3057
177 Ga0495640_0359805 3300046533 Bacteria 897
178 Ga0495622_0000004 3300046557 Bacteria 258984
179 Ga0495633_0217415 3300046558 Bacteria 875
180 Ga0495633_0284357 3300046558 Bacteria 752
181 Ga0495656_0321882 3300046615 Bacteria 797
182 Ga0495625_0013800 3300046660 Bacteria 6474
183 Ga0495625_0116668 3300046660 Bacteria 1821
184 Ga0495649_0017592 3300046694 Bacteria 4031
185 Ga0495649_0428363 3300046694 Bacteria 662
186 Ga0495672_0023276 3300047320 Bacteria 4011
187 Ga0495686_0059514 3300047472 Bacteria 2377
188 Ga0496102_0573310 3300048905 Bacteria 1051
189 Ga0496104_0192222 3300048907 Bacteria 1953
190 Ga0496106_0266248 3300048909 Bacteria 1372
191 Ga0496106_1128892 3300048909 Bacteria 613
192 Ga0496115_0000578 3300048918 Bacteria 28236
193 Ga0496121_0103505 3300048924 Bacteria 2190
194 Ga0496121_0206011 3300048924 Bacteria 1397
195 Ga0496125_0129174 3300048928 Bacteria 1783
196 Ga0496126_0211108 3300048929 Bacteria 1634
197 Ga0501034_0239730 3300049571 Bacteria 1760
198 Ga0501036_0644699 3300049572 Bacteria 877
199 Ga0501038_0830001 3300049574 Bacteria 685
200 Ga0501039_0231501 3300049575 Bacteria 1453
201 Ga0501039_0833101 3300049575 Unclassified 719
202 Ga0501040_0608922 3300049576 Bacteria 789
203 Ga0501042_0477371 3300049578 Unclassified 905
204 Ga0501043_0143117 3300049579 Bacteria 1872
205 Ga0501046_0131291 3300049580 Bacteria 1900
206 Ga0501047_0073237 3300049581 Bacteria 3298
207 Ga0501067_0077095 3300049583 Bacteria 1847
208 Ga0501071_1363982 3300049587 Unclassified 548
209 Ga0501083_0203053 3300049744 Bacteria 1292
210 nmdc:mga00v17_726696_c1 3300050491 Bacteria 635
211 nmdc:mga0k408_839090_c1 3300050493 Unclassified 534
212 nmdc:mga07m45_253461_c1 3300050496 Unclassified 1024
213 nmdc:mga08y16_84053_c1 3300050511 Bacteria 3318
214 nmdc:mga0rr50_216503_c1 3300050513 Bacteria 1580
215 Ga0500643_146518 3300053087 Bacteria 634
216 Ga0500583_0260643 3300053092 Bacteria 854
217 Ga0500658_0040584 3300053134 Bacteria 1864
218 Ga0500568_0037968 3300053139 Bacteria 1951
219 Ga0500600_0247019 3300053149 Bacteria 802
220 Ga0500616_0000104 3300053153 Bacteria 159954
221 Ga0500627_0055067 3300053158 Bacteria 1741
222 Ga0501082_0111768 3300060353 Bacteria 2365
223 Ga0466962_0052235 3300061719 Unclassified 1954

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 8056681323 8056683897 106
2 3300006028 Ga0070717_10334581 Ga0070717_103345811 108
3 3300044683 Ga0466965_0656594 Ga0466965_0656594_40_384 114
4 3300046460 Ga0495638_0181948 Ga0495638_0181948_19_387 114
5 3300053139 Ga0500568_0037968 Ga0500568_0037968_477_878 115
6 3300047320 Ga0495672_0023276 Ga0495672_0023276_2725_3132 119
7 3300005331 Ga0070670_100667783 Ga0070670_1006677831 123
8 iso_pu_bacteria 2582580891 2583791281 129
9 iso_pu_bacteria 2582581299 2585232984 129
10 iso_pu_bacteria 2868088558 2868088922 129
11 3300028556 Ga0265337_1022885 Ga0265337_10228853 130
12 3300046499 Ga0495594_0361721 Ga0495594_0361721_65_484 130
13 iso_pu_bacteria 2585427633 2585992468 130
14 iso_pu_bacteria 2585427634 2586003220 130
15 3300025922 Ga0207646_10123018 Ga0207646_101230183 131
16 3300031616 Ga0307508_10362631 Ga0307508_103626311 131
17 3300033180 Ga0307510_10211678 Ga0307510_102116783 131
18 3300046533 Ga0495640_0359805 Ga0495640_0359805_218_730 131
19 3300046558 Ga0495633_0217415 Ga0495633_0217415_424_828 131
20 3300046558 Ga0495633_0284357 Ga0495633_0284357_205_633 131
21 3300046615 Ga0495656_0321882 Ga0495656_0321882_244_681 131
22 3300046660 Ga0495625_0116668 Ga0495625_0116668_1071_1499 131
23 3300003323 rootH1_10320980 rootH1_103209802 132
24 3300005467 Ga0070706_100879548 Ga0070706_1008795482 132
25 3300005468 Ga0070707_100148489 Ga0070707_1001484893 132
26 3300005471 Ga0070698_100389219 Ga0070698_1003892192 132
27 3300025910 Ga0207684_10929642 Ga0207684_109296421 132
28 3300027876 Ga0209974_10125926 Ga0209974_101259262 132
29 3300046472 Ga0495580_0002677 Ga0495580_0002677_379_789 132
30 3300046557 Ga0495622_0000004 Ga0495622_0000004_236072_236488 132
31 3300047472 Ga0495686_0059514 Ga0495686_0059514_975_1391 132
32 3300003203 JGI25406J46586_10009321 JGI25406J46586_100093212 133
33 3300003215 JGI25153J46596_10003233 JGI25153J46596_100032339 133
34 3300003320 rootH2_10000481 rootH2_100004812 133
35 3300003323 rootH1_10200992 rootH1_102009922 133
36 3300003775 Ga0055524_1030603 Ga0055524_10306032 133
37 3300005262 Ga0065165_1014225 Ga0065165_10142254 133
38 3300005329 Ga0070683_100019759 Ga0070683_1000197592 133
39 3300005329 Ga0070683_100158058 Ga0070683_1001580583 133
40 3300005331 Ga0070670_100064834 Ga0070670_1000648345 133
41 3300005333 Ga0070677_10119778 Ga0070677_101197783 133
42 3300005334 Ga0068869_100007708 Ga0068869_1000077086 133
43 3300005338 Ga0068868_100009229 Ga0068868_1000092296 133
44 3300005339 Ga0070660_100472833 Ga0070660_1004728332 133
45 3300005343 Ga0070687_100077277 Ga0070687_1000772774 133
46 3300005345 Ga0070692_10001893 Ga0070692_100018936 133
47 3300005347 Ga0070668_100733747 Ga0070668_1007337472 133
48 3300005354 Ga0070675_100001447 Ga0070675_10000144710 133
49 3300005354 Ga0070675_100500752 Ga0070675_1005007522 133
50 3300005355 Ga0070671_101043559 Ga0070671_1010435591 133
51 3300005356 Ga0070674_100362024 Ga0070674_1003620243 133
52 3300005366 Ga0070659_100206959 Ga0070659_1002069592 133
53 3300005441 Ga0070700_100009131 Ga0070700_1000091312 133
54 3300005455 Ga0070663_100005113 Ga0070663_1000051136 133
55 3300005456 Ga0070678_100371601 Ga0070678_1003716012 133
56 3300005456 Ga0070678_100404891 Ga0070678_1004048912 133
57 3300005457 Ga0070662_100012741 Ga0070662_1000127412 133
58 3300005458 Ga0070681_10268926 Ga0070681_102689262 133
59 3300005459 Ga0068867_102138028 Ga0068867_1021380281 133
60 3300005535 Ga0070684_100019786 Ga0070684_1000197862 133
61 3300005535 Ga0070684_100086832 Ga0070684_1000868324 133
62 3300005539 Ga0068853_101172733 Ga0068853_1011727332 133
63 3300005543 Ga0070672_100279825 Ga0070672_1002798252 133
64 3300005545 Ga0070695_100813303 Ga0070695_1008133031 133
65 3300005548 Ga0070665_100011667 Ga0070665_1000116672 133
66 3300005549 Ga0070704_100469842 Ga0070704_1004698422 133
67 3300005563 Ga0068855_100000813 Ga0068855_10000081321 133
68 3300005564 Ga0070664_100001401 Ga0070664_1000014017 133
69 3300005577 Ga0068857_100015768 Ga0068857_1000157682 133
70 3300005577 Ga0068857_100550091 Ga0068857_1005500912 133
71 3300005616 Ga0068852_100000078 Ga0068852_10000007814 133
72 3300005719 Ga0068861_100077565 Ga0068861_1000775652 133
73 3300005841 Ga0068863_100263049 Ga0068863_1002630494 133
74 3300005842 Ga0068858_100157427 Ga0068858_1001574272 133
75 3300005843 Ga0068860_100047534 Ga0068860_1000475343 133
76 3300005844 Ga0068862_100021451 Ga0068862_1000214512 133
77 3300005844 Ga0068862_100371632 Ga0068862_1003716322 133
78 3300005985 Ga0081539_10000785 Ga0081539_1000078536 133
79 3300006237 Ga0097621_100807879 Ga0097621_1008078792 133
80 3300006847 Ga0075431_100801204 Ga0075431_1008012042 133
81 3300007076 Ga0075435_100737926 Ga0075435_1007379262 133
82 3300009093 Ga0105240_10000065 Ga0105240_10000065166 133
83 3300009093 Ga0105240_10261413 Ga0105240_102614134 133
84 3300009094 Ga0111539_10002350 Ga0111539_1000235016 133
85 3300009098 Ga0105245_10049258 Ga0105245_100492583 133
86 3300009174 Ga0105241_10613401 Ga0105241_106134012 133
87 3300009177 Ga0105248_10904168 Ga0105248_109041682 133
88 3300009545 Ga0105237_10385024 Ga0105237_103850242 133
89 3300009553 Ga0105249_10831627 Ga0105249_108316272 133
90 3300010375 Ga0105239_10736275 Ga0105239_107362752 133
91 3300011119 Ga0105246_10097683 Ga0105246_100976832 133
92 3300013104 Ga0157370_10000009 Ga0157370_1000000914 133
93 3300013105 Ga0157369_10000022 Ga0157369_10000022183 133
94 3300013296 Ga0157374_11724664 Ga0157374_117246642 133
95 3300013297 Ga0157378_10849752 Ga0157378_108497522 133
96 3300013307 Ga0157372_10000192 Ga0157372_1000019243 133
97 3300013307 Ga0157372_10064718 Ga0157372_100647184 133
98 3300013308 Ga0157375_10421935 Ga0157375_104219352 133
99 3300014745 Ga0157377_10013371 Ga0157377_100133713 133
100 3300014968 Ga0157379_10466773 Ga0157379_104667732 133
101 3300025228 Ga0209672_100470 Ga0209672_1004706 133
102 3300025299 Ga0209256_1009705 Ga0209256_10097053 133
103 3300025302 Ga0207426_1014745 Ga0207426_10147454 133
104 3300025893 Ga0207682_10137545 Ga0207682_101375453 133
105 3300025901 Ga0207688_10027844 Ga0207688_100278443 133
106 3300025912 Ga0207707_10344806 Ga0207707_103448063 133
107 3300025913 Ga0207695_10000052 Ga0207695_1000005215 133
108 3300025913 Ga0207695_10202215 Ga0207695_102022151 133
109 3300025914 Ga0207671_10127300 Ga0207671_101273003 133
110 3300025918 Ga0207662_10078903 Ga0207662_100789034 133
111 3300025923 Ga0207681_10414075 Ga0207681_104140752 133
112 3300025926 Ga0207659_10010779 Ga0207659_100107792 133
113 3300025926 Ga0207659_10088841 Ga0207659_100888412 133
114 3300025927 Ga0207687_10151687 Ga0207687_101516872 133
115 3300025931 Ga0207644_10873408 Ga0207644_108734082 133
116 3300025932 Ga0207690_10178944 Ga0207690_101789442 133
117 3300025933 Ga0207706_10406208 Ga0207706_104062082 133
118 3300025936 Ga0207670_10773631 Ga0207670_107736312 133
119 3300025936 Ga0207670_10894245 Ga0207670_108942451 133
120 3300025937 Ga0207669_10424266 Ga0207669_104242662 133
121 3300025938 Ga0207704_10164020 Ga0207704_101640202 133
122 3300025940 Ga0207691_10200569 Ga0207691_102005693 133
123 3300025942 Ga0207689_10144275 Ga0207689_101442752 133
124 3300025944 Ga0207661_10015472 Ga0207661_100154726 133
125 3300025944 Ga0207661_10739182 Ga0207661_107391822 133
126 3300025945 Ga0207679_10241904 Ga0207679_102419042 133
127 3300025949 Ga0207667_10000442 Ga0207667_1000044235 133
128 3300025972 Ga0207668_10550385 Ga0207668_105503852 133
129 3300026023 Ga0207677_10063352 Ga0207677_100633524 133
130 3300026035 Ga0207703_10047641 Ga0207703_100476412 133
131 3300026041 Ga0207639_11296720 Ga0207639_112967202 133
132 3300026067 Ga0207678_10145752 Ga0207678_101457522 133
133 3300026067 Ga0207678_10209167 Ga0207678_102091673 133
134 3300026075 Ga0207708_10011855 Ga0207708_100118552 133
135 3300026088 Ga0207641_10388566 Ga0207641_103885662 133
136 3300026089 Ga0207648_11706809 Ga0207648_117068091 133
137 3300026116 Ga0207674_10008864 Ga0207674_100088646 133
138 3300026121 Ga0207683_10263830 Ga0207683_102638302 133
139 3300026121 Ga0207683_10454067 Ga0207683_104540672 133
140 3300026142 Ga0207698_10000007 Ga0207698_1000000715 133
141 3300027907 Ga0207428_10048564 Ga0207428_100485642 133
142 3300028379 Ga0268266_10004754 Ga0268266_1000475411 133
143 3300028380 Ga0268265_10117511 Ga0268265_101175112 133
144 3300028380 Ga0268265_10543230 Ga0268265_105432302 133
145 3300028666 Ga0265336_10124857 Ga0265336_101248571 133
146 3300028794 Ga0307515_10183886 Ga0307515_101838863 133
147 3300028800 Ga0265338_10000188 Ga0265338_1000018854 133
148 3300029957 Ga0265324_10000366 Ga0265324_1000036630 133
149 3300029957 Ga0265324_10036985 Ga0265324_100369852 133
150 3300031239 Ga0265328_10000081 Ga0265328_100000817 133
151 3300031239 Ga0265328_10048196 Ga0265328_100481962 133
152 3300031249 Ga0265339_10028941 Ga0265339_100289412 133
153 3300031711 Ga0265314_10008166 Ga0265314_100081664 133
154 3300031728 Ga0316578_10113119 Ga0316578_101131191 133
155 3300031730 Ga0307516_10271224 Ga0307516_102712241 133
156 3300031901 Ga0307406_10126331 Ga0307406_101263312 133
157 3300031995 Ga0307409_100088252 Ga0307409_1000882523 133
158 3300032002 Ga0307416_100832914 Ga0307416_1008329142 133
159 3300032126 Ga0307415_100519075 Ga0307415_1005190752 133
160 3300037418 Ga0395900_0000159 Ga0395900_0000159_60707_61132 133
161 3300037466 Ga0395898_0000425 Ga0395898_0000425_28637_29062 133
162 3300039110 Ga0400487_04300 Ga0400487_04300_182_610 133
163 3300041404 Ga0439436_0128697 Ga0439436_0128697_55_480 133
164 3300041408 Ga0439453_0010342 Ga0439453_0010342_856_1281 133
165 3300042003 Ga0439443_088140 Ga0439443_088140_25_450 133
166 3300044684 Ga0466966_0296866 Ga0466966_0296866_526_954 133
167 3300044712 Ga0453684_0001955 Ga0453684_0001955_31144_31563 133
168 3300045051 Ga0451576_0000042 Ga0451576_0000042_31144_31563 133
169 3300045836 Ga0466958_0000721 Ga0466958_0000721_6229_6657 133
170 3300046506 Ga0495583_0007097 Ga0495583_0007097_732_1154 133
171 3300046524 Ga0495648_0038501 Ga0495648_0038501_316_738 133
172 3300046660 Ga0495625_0013800 Ga0495625_0013800_4590_5015 133
173 3300046694 Ga0495649_0017592 Ga0495649_0017592_1189_1614 133
174 3300046694 Ga0495649_0428363 Ga0495649_0428363_124_537 133
175 3300048905 Ga0496102_0573310 Ga0496102_0573310_433_855 133
176 3300048907 Ga0496104_0192222 Ga0496104_0192222_1404_1826 133
177 3300048909 Ga0496106_0266248 Ga0496106_0266248_317_736 133
178 3300048909 Ga0496106_1128892 Ga0496106_1128892_151_573 133
179 3300048918 Ga0496115_0000578 Ga0496115_0000578_8062_8487 133
180 3300048924 Ga0496121_0206011 Ga0496121_0206011_633_1055 133
181 3300048928 Ga0496125_0129174 Ga0496125_0129174_851_1282 133
182 3300048929 Ga0496126_0211108 Ga0496126_0211108_600_1025 133
183 3300049571 Ga0501034_0239730 Ga0501034_0239730_999_1421 133
184 3300049572 Ga0501036_0644699 Ga0501036_0644699_385_807 133
185 3300049574 Ga0501038_0830001 Ga0501038_0830001_102_524 133
186 3300049575 Ga0501039_0833101 Ga0501039_0833101_139_558 133
187 3300049576 Ga0501040_0608922 Ga0501040_0608922_298_717 133
188 3300049578 Ga0501042_0477371 Ga0501042_0477371_16_441 133
189 3300049579 Ga0501043_0143117 Ga0501043_0143117_29_451 133
190 3300049580 Ga0501046_0131291 Ga0501046_0131291_1291_1713 133
191 3300049581 Ga0501047_0073237 Ga0501047_0073237_1637_2059 133
192 3300049583 Ga0501067_0077095 Ga0501067_0077095_890_1312 133
193 3300049587 Ga0501071_1363982 Ga0501071_1363982_17_442 133
194 3300049744 Ga0501083_0203053 Ga0501083_0203053_508_930 133
195 3300050491 nmdc:mga00v17_726696_c1 nmdc:mga00v17_726696_c1_108_533 133
196 3300050493 nmdc:mga0k408_839090_c1 nmdc:mga0k408_839090_c1_66_491 133
197 3300050496 nmdc:mga07m45_253461_c1 nmdc:mga07m45_253461_c1_316_741 133
198 3300050511 nmdc:mga08y16_84053_c1 nmdc:mga08y16_84053_c1_2635_3060 133
199 3300050513 nmdc:mga0rr50_216503_c1 nmdc:mga0rr50_216503_c1_117_530 133
200 3300053087 Ga0500643_146518 Ga0500643_146518_77_499 133
201 3300053092 Ga0500583_0260643 Ga0500583_0260643_348_785 133
202 3300053134 Ga0500658_0040584 Ga0500658_0040584_1042_1455 133
203 3300053149 Ga0500600_0247019 Ga0500600_0247019_18_455 133
204 3300053153 Ga0500616_0000104 Ga0500616_0000104_53881_54303 133
205 3300053158 Ga0500627_0055067 Ga0500627_0055067_656_1078 133
206 3300060353 Ga0501082_0111768 Ga0501082_0111768_750_1172 133
207 3300061719 Ga0466962_0052235 Ga0466962_0052235_1315_1743 133
208 3300002705 JGI25156J39149_1023912 JGI25156J39149_10239122 134
209 3300002741 JGI25157J39369_1014297 JGI25157J39369_10142971 134
210 3300003759 Ga0055525_1000046 Ga0055525_100004668 134
211 3300025230 Ga0209563_100005 Ga0209563_100005806 134
212 3300025246 Ga0209646_1018311 Ga0209646_10183113 134
213 3300025250 Ga0209026_1020246 Ga0209026_10202462 134
214 3300025256 Ga0209759_1031360 Ga0209759_10313602 134
215 3300028794 Ga0307515_10079658 Ga0307515_100796582 134
216 3300028794 Ga0307515_10122840 Ga0307515_101228401 134
217 3300028794 Ga0307515_10893857 Ga0307515_108938571 134
218 3300031239 Ga0265328_10012790 Ga0265328_100127902 134
219 3300031239 Ga0265328_10086717 Ga0265328_100867172 134
220 3300031649 Ga0307514_10008735 Ga0307514_100087351 134
221 3300039447 Ga0436361_1001917 Ga0436361_1001917_60_467 134
222 3300039447 Ga0436361_1015587 Ga0436361_1015587_699_1127 134
223 3300042121 Ga0450919_005745 Ga0450919_005745_327_740 134
224 3300042531 Ga0450918_001113 Ga0450918_001113_2704_3117 134
225 3300044658 Ga0466972_0028505 Ga0466972_0028505_78_551 134
226 3300044712 Ga0453684_0000102 Ga0453684_0000102_51761_52180 134
227 3300045051 Ga0451576_1294958 Ga0451576_1294958_76_492 134
228 3300048924 Ga0496121_0103505 Ga0496121_0103505_14_427 134
229 3300049575 Ga0501039_0231501 Ga0501039_0231501_838_1260 134

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01850

PIN

PIN domain

2

127

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2h1o-assembly1.cif.gz_A structure of fitab bound to ir36 dna fragment 0.8793 1 134
2h1c-assembly1.cif.gz_A crystal structure of fitacb from neisseria gonorrhoeae 0.8785 1 134
2h1o-assembly1.cif.gz_A structure of fitab bound to ir36 dna fragment 0.8732 1 134
2h1c-assembly1.cif.gz_A crystal structure of fitacb from neisseria gonorrhoeae 0.8724 1 134
5k8j-assembly1.cif.gz_B structure of caulobacter crescentus vapbc1 (apo form) 0.8556 1 130
ID Description Score Start End Superfamily
af_P9WF99_2_82_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.9205 1 72 3.40.50.1010
2bsqA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8793 1 134 3.40.50.1010
2bsqA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8732 1 134 3.40.50.1010
af_P9WF93_1_123_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8191 1 123 3.40.50.1010
af_P9WF99_2_82_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8153 1 72 3.40.50.1010
ID Description Score Start End GO Terms
AF-A0A2V9HS05-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9898 2 133 GO:0000287
GO:0004540
GO:0090729
AF-E5AUJ6-F1-model_v4 Plasmid stability protein stbB 0.9885 1 134 GO:0004518
GO:0046872
AF-A0A6B0X119-F1-model_v4 Type II toxin-antitoxin system VapC family toxin 0.9857 1 134 GO:0004518
GO:0046872
AF-A0A2V9ST88-F1-model_v4 VapC toxin family PIN domain ribonuclease 0.9837 2 132 GO:0004518
GO:0046872
AF-A0A351A4X0-F1-model_v4 VapC toxin family PIN domain ribonuclease 0.9833 1 122 GO:0004518
GO:0046872

Feature Viewer

pLDDT pTM Quality
94.49 0.88 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map